ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf16m14 |
|---|---|
| Clone Library Name | barley_pub |
>AK068306:Os12g0168800 | Length = 414 Score = 51.2 bits (121), Expect = 8e-07 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +1 Query: 439 RQRAKAA-PSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKREESAAASYKP 615 + +AKA P + C CG T T +WR GP G +LCNACG+ Y R+ Y+P Sbjct: 265 KTKAKAKKPKRKRSCVHCGSTETPQWREGPTGRGTLCNACGVRY-----RQGRLLPEYRP 319 Query: 616 K 618 K Sbjct: 320 K 320 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +1 Query: 442 QRAKAAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGI 561 + K A C +C T +WR GP G +LCNACG+ Sbjct: 139 EAGKRAAKRARRCLNCDAVETPQWRSGPMGRSTLCNACGV 178
>AK101287:Os05g0578900 | Length = 279 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/43 (55%), Positives = 28/43 (65%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKREESAAAS 606 C +CG +T WR GP G KSLCNACGI Y K+EE AA+ Sbjct: 154 CANCGTASTPLWRNGPRGPKSLCNACGIRY----KKEERRAAA 192
>AK073464:Os05g0578900 | Length = 279 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/43 (55%), Positives = 28/43 (65%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKREESAAAS 606 C +CG +T WR GP G KSLCNACGI Y K+EE AA+ Sbjct: 154 CANCGTASTPLWRNGPRGPKSLCNACGIRY----KKEERRAAA 192
>AK073709:Os03g0831200 | Length = 136 Score = 50.1 bits (118), Expect = 2e-06 Identities = 25/48 (52%), Positives = 27/48 (56%) Frame = +1 Query: 451 KAAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKREES 594 + A E C C T T WR GP G KSLCNACGI Y K KR E+ Sbjct: 18 RTASGEPKACTDCHTTKTPLWRGGPSGPKSLCNACGIRYRK--KRREA 63
>Os05g0155400:Os05g0155400 | Length = 151 Score = 49.7 bits (117), Expect = 2e-06 Identities = 23/47 (48%), Positives = 28/47 (59%) Frame = +1 Query: 448 AKAAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKRE 588 A A + + C CG T T WR GP G +SLCNACGI Y K ++E Sbjct: 17 AAAEEAGRRCCVECGATTTPMWRGGPTGPRSLCNACGIRYRKKRRQE 63
>AK119611:Os04g0539500 | Length = 427 Score = 47.4 bits (111), Expect = 1e-05 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHY 567 C CG T +WR GP+G K+LCNACG+ Y Sbjct: 342 CSHCGVQKTPQWRAGPEGAKTLCNACGVRY 371
>AK109477:Os02g0645600 | Length = 387 Score = 47.4 bits (111), Expect = 1e-05 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHY 567 C CG T +WR GP+G K+LCNACG+ Y Sbjct: 306 CSHCGVQKTPQWRAGPEGAKTLCNACGVRY 335
>AK099144:Os04g0539500 | Length = 390 Score = 47.4 bits (111), Expect = 1e-05 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHY 567 C CG T +WR GP+G K+LCNACG+ Y Sbjct: 305 CSHCGVQKTPQWRAGPEGAKTLCNACGVRY 334
>AK060574:Os04g0539500 | Length = 390 Score = 47.4 bits (111), Expect = 1e-05 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHY 567 C CG T +WR GP+G K+LCNACG+ Y Sbjct: 305 CSHCGVQKTPQWRAGPEGAKTLCNACGVRY 334
>AK099607:Os02g0220400 | Length = 353 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/43 (53%), Positives = 26/43 (60%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKREESAAAS 606 C C T T WR GP G KSLCNACGI K +R +AAA+ Sbjct: 178 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRK-ARRAMAAAAN 219
>AK067244:Os01g0343300 | Length = 131 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/32 (59%), Positives = 20/32 (62%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHYAK 573 C C T T WR GP G +SLCNACGI Y K Sbjct: 21 CVECRATTTPMWRSGPTGPRSLCNACGIRYRK 52
>AK121896:Os01g0745700 | Length = 387 Score = 45.1 bits (105), Expect = 6e-05 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 454 AAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGIHY--AKLVKREESAAA 603 AA E C C T +WR GP G K+LCNACG+ Y +LV AA+ Sbjct: 256 AAAGEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS 307
>Os05g0520300:Os05g0520300 | Length = 386 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 448 AKAAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGIHY--AKLVKREESAAA 603 A A +E C C T +WR GP G K+LCNACG+ Y +LV AA+ Sbjct: 245 AAQAAAEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS 298
>Os03g0145200:Os03g0145200 | Length = 219 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 21/70 (30%) Frame = +1 Query: 421 KTKHLRRQRAKAAP---------------------SEQLYCRSCGETNTCEWRRGPDGYK 537 +TK LRR+R AP + + C C T +WR GPDG + Sbjct: 84 RTKGLRRRRRVTAPWSLAPLLSRPRQAAAAAADAGAPRRRCTHCAVDETPQWRLGPDGPR 143 Query: 538 SLCNACGIHY 567 +LCNACG+ + Sbjct: 144 TLCNACGVRF 153
>AK069851:Os06g0571800 | Length = 347 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/32 (59%), Positives = 19/32 (59%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHYAK 573 C C T T WR GP G KSLCNACGI K Sbjct: 203 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRK 234
>AK101421:Os12g0624900 | Length = 309 Score = 40.8 bits (94), Expect(2) = 1e-04 Identities = 26/93 (27%), Positives = 38/93 (40%) Frame = +1 Query: 289 PTNNSSNKRIPAPLQRPRVSKKKKINXXXXXXXXXXXXXXXXXKKTKHLRRQRAKAAPSE 468 PT ++ RI A SKK+ KK ++ + P + Sbjct: 178 PTCDACRLRIEARNGHTTSSKKRYGQEIDKEQDIGKRRDKKKIKKAVYVNDELLSEEPMK 237 Query: 469 QLYCRSCGETNTCEWRRGPDGYKSLCNACGIHY 567 + C C T +WR GP G K+LCNACG+ + Sbjct: 238 R--CTHCLSYKTPQWRTGPLGPKTLCNACGVRF 268 Score = 22.3 bits (46), Expect(2) = 1e-04 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +2 Query: 257 VCCSYCQTVESPQ 295 + CSYC + +SPQ Sbjct: 158 ITCSYCLSSQSPQ 170
>AK073803:Os07g0615900 | Length = 742 Score = 42.0 bits (97), Expect = 5e-04 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +1 Query: 433 LRRQRAKAAPSEQLYCRSCGETN--TCEWRRGPDGYKSLCNACGIHYAK 573 L R A + C CG + T RRGPDG ++LCNACGI Y K Sbjct: 50 LHRDNADDGLDGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRK 98
>AK066317:Os07g0615900 | Length = 732 Score = 42.0 bits (97), Expect = 5e-04 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +1 Query: 433 LRRQRAKAAPSEQLYCRSCGETN--TCEWRRGPDGYKSLCNACGIHYAK 573 L R A + C CG + T RRGPDG ++LCNACGI Y K Sbjct: 50 LHRDNADDGLDGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRK 98
>Os10g0557600:Os10g0557600 | Length = 387 Score = 41.6 bits (96), Expect = 6e-04 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHY 567 C C T +WR GP G K+LCNACG+ + Sbjct: 278 CTHCASEKTPQWRTGPLGPKTLCNACGVRF 307
>AK070729:Os04g0544500 | Length = 450 Score = 40.8 bits (94), Expect = 0.001 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 478 CRSCGETNTCEWRRGPDGYKSLCNACGIHYAKLVKREESAAASYKP 615 CR CG T+T WR GP LCNACG + R + + +Y P Sbjct: 7 CRHCGVTSTPLWRNGPPDKPVLCNACGSRW-----RTKGSLTNYTP 47
>AK068931:Os02g0148500 | Length = 328 Score = 39.3 bits (90), Expect = 0.003 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = +1 Query: 460 PSEQLYCRSCG--ETNTCEWRRGPDGYKSLCNACGIHYA 570 P C CG +T RRGPDG ++LCNACG+ +A Sbjct: 230 PPSAAECHHCGISAASTPMMRRGPDGPRTLCNACGLMWA 268
>Os03g0734900:Os03g0734900 | Length = 308 Score = 38.9 bits (89), Expect = 0.004 Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 2/36 (5%) Frame = +1 Query: 469 QLYCRSCGETN--TCEWRRGPDGYKSLCNACGIHYA 570 + +C++CG ++ T RRGP G +SLCNACG+ +A Sbjct: 200 ETHCQNCGISSRLTPAMRRGPAGPRSLCNACGLMWA 235
>AK101197:Os03g0181600 | Length = 461 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +1 Query: 478 CRSCG--ETNTCEWRRGPDGYKSLCNACGIHYAK 573 C CG T RRGP+G ++LCNACGI +AK Sbjct: 30 CLRCGISANATPHMRRGPEGRRTLCNACGIAWAK 63
>AK067807:Os03g0181600 | Length = 732 Score = 38.9 bits (89), Expect = 0.004 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +1 Query: 478 CRSCG--ETNTCEWRRGPDGYKSLCNACGIHYAK 573 C CG T RRGP+G ++LCNACGI +AK Sbjct: 30 CLRCGISANATPHMRRGPEGRRTLCNACGIAWAK 63
>AK105025:Os03g0684000 | Length = 319 Score = 38.5 bits (88), Expect = 0.005 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +1 Query: 463 SEQLYCRSCG--ETNTCEWRRGPDGYKSLCNACGIHYA 570 S + C++CG E T RRGP G ++LCNACG+ +A Sbjct: 210 SRESKCQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWA 247
>Os06g0698900:Os06g0698900 | Length = 369 Score = 37.7 bits (86), Expect = 0.009 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = +1 Query: 460 PSEQLYCRSCG--ETNTCEWRRGPDGYKSLCNACGIHYA 570 P C CG T RRGPDG ++LCNACG+ +A Sbjct: 298 PPSAAECHHCGINAKATPMMRRGPDGPRTLCNACGLMWA 336
>AK110234: | Length = 1243 Score = 37.0 bits (84), Expect = 0.015 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +1 Query: 427 KHLRRQRAKAAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACGI 561 K L + A C +C T T WRR P+G + LCNACG+ Sbjct: 1079 KDLPSASSMATADPPTVCSNCHTTKTPLWRRDPEG-QPLCNACGL 1122
>Os02g0642600:Os02g0642600 | Length = 1713 Score = 28.9 bits (63), Expect = 4.1 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 248 NQRVCCSYCQTVESPQTIHQTKE 316 N+ +CCSY VE +T H + E Sbjct: 487 NREICCSYASMVEEAKTCHLSSE 509
>AK102773:Os06g0600700 | Length = 402 Score = 28.9 bits (63), Expect = 4.1 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +2 Query: 437 GDKELKPRHQNSFIVALVVKQTLVNGDVVQMATNPCAMLAEFTMLNLLNEKKALLHHIN 613 G K L+ H++ ALV + + V +PC ML E M LN++K +H N Sbjct: 204 GMKRLQTPHRDGRHAALVAGVSPRLAEKVDAVDSPCLMLGEKYMHASLNKRKNGVHTTN 262
>Os01g0976800:Os01g0976800 | Length = 126 Score = 28.1 bits (61), Expect = 7.0 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 532 YKSLCNACGIHYAK 573 ++SLCNACGI Y K Sbjct: 26 FQSLCNACGIRYRK 39
>AK109549:Os09g0553300 | Length = 184 Score = 28.1 bits (61), Expect = 7.0 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 1/110 (0%) Frame = +1 Query: 241 IEKSASMLQLLSDSGIPTNNSSNKRIPAPLQRPRVSKKKKINXXXXXXXXXXXXXXXXXK 420 + ++AS L + + +SSN PAP P V K KI Sbjct: 35 LPRAASAASRLRPPRMSSASSSNASSPAPSPPPPVVPKSKIR------------------ 76 Query: 421 KTKHLRRQRAKAAPSEQLYCRSCGETNTCEWRRGPDGYKSLCNACG-IHY 567 +C SCG G + +++C++CG +HY Sbjct: 77 ------------------FCPSCGSPTKLAIPDGDEKMRAVCSSCGRVHY 108
>AK103852:Os06g0224400 | Length = 392 Score = 28.1 bits (61), Expect = 7.0 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +1 Query: 526 DGYKSLCNACGIHYAKLVKREES 594 D Y S C CG+H KL+ + ++ Sbjct: 368 DAYASSCTGCGVHQLKLLSKRKT 390
>AK101356:Os07g0679700 | Length = 949 Score = 28.1 bits (61), Expect = 7.0 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%) Frame = +1 Query: 508 EWRRG----PDGYKSLCNACGIHYAKLV 579 EWR+G G+ LC+ CG+ Y +LV Sbjct: 33 EWRKGWPLRSGGFAVLCDKCGLAYEQLV 60
>Os11g0502200:Os11g0502200 | Length = 1099 Score = 27.7 bits (60), Expect = 9.2 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = +1 Query: 211 TSQNPNMASFIEKSASMLQLLSDSGIPTNNSSNKR----IPAPLQRPRVSKK 354 T+ P MAS + + AS+L L+ G PT++ ++ P P Q P + + Sbjct: 96 TAAAPTMASLLPELASLLAQLAVCGAPTSSGASSSALHGAPPPPQPPALDNE 147
>AK070619:Os01g0195500 | Length = 258 Score = 27.7 bits (60), Expect = 9.2 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Frame = +1 Query: 451 KAAPSEQLYCRSCG-ETNTCEWRRGPDGYKS----LCNACGIHYAKLVKREESAAA 603 K AP LYC CG CE+ GPD + NA G++ +L+ SAAA Sbjct: 64 KPAPVRVLYCGVCGLPAEYCEF--GPDFERCKPWLRANAPGVYPDELLASSSSAAA 117 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,684,732 Number of extensions: 352046 Number of successful extensions: 950 Number of sequences better than 10.0: 35 Number of HSP's gapped: 949 Number of HSP's successfully gapped: 38 Length of query: 257 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 159 Effective length of database: 11,475,837 Effective search space: 1824658083 Effective search space used: 1824658083 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
