ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf16j21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Os10g0436800:Os10g0436800 28 1.5
2AK102859:Os08g0528700 27 4.4
3AK101068:Os02g0655700 27 4.4
4AK101677:Os03g0835600 26 5.7
5AK066390:Os03g0835600 26 5.7
6AK067696:Os02g0525900 25 9.7
7AK066073:Os02g0525900 25 9.7
8AK060822:Os02g0525900 25 9.7 
>Os10g0436800:Os10g0436800 |
          Length = 909
 Score = 28.1 bits (61), Expect = 1.5
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 116 QCKAVPQSTSHPWPRMTNAGTPAGQSVSTG 27
           Q KA   ST   W +   AG PAG  VSTG
Sbjct: 136 QMKAFFDSTGSLWEKQKLAGKPAGFFVSTG 165
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>AK102859:Os08g0528700 |
          Length = 187

 Score = 26.6 bits (57), Expect = 4.4
 Identities = 9/25 (36%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -2

Query: 119 NQCKAVPQSTSHP-WPRMTNAGTPA 48
           + C A P++++H  WPR +++G+P+
Sbjct: 124 SSCPAAPRASTHATWPRGSSSGSPS 148
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>AK101068:Os02g0655700 |
          Length = 605

 Score = 26.6 bits (57), Expect = 4.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 134 IYSKGNQCKAVPQSTSHPWPRMTNAGTPA 48
           +Y+   Q  AVP S+ HP P +   G P+
Sbjct: 574 VYAGYGQYHAVPSSSDHPHPAVAYHGIPS 602
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>AK101677:Os03g0835600 |
          Length = 655

 Score = 26.2 bits (56), Expect = 5.7
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 47  LPAYQRLSSSAMDGWLIG 100
           L A QR SSS M GWL+G
Sbjct: 630 LEAKQRQSSSGMWGWLVG 647
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>AK066390:Os03g0835600 |
          Length = 318

 Score = 26.2 bits (56), Expect = 5.7
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 47  LPAYQRLSSSAMDGWLIG 100
           L A QR SSS M GWL+G
Sbjct: 293 LEAKQRQSSSGMWGWLVG 310
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>AK067696:Os02g0525900 |
          Length = 705

 Score = 25.4 bits (54), Expect = 9.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 126 QGKSVQSCPPI-NQPSMAEDDKRWYAGRPV 40
           QG +V  C    NQ +M  +D +W AGR V
Sbjct: 264 QGVAVGLCLTYENQSAMKREDTKWQAGRDV 293
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>AK066073:Os02g0525900 |
          Length = 705

 Score = 25.4 bits (54), Expect = 9.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 126 QGKSVQSCPPI-NQPSMAEDDKRWYAGRPV 40
           QG +V  C    NQ +M  +D +W AGR V
Sbjct: 264 QGVAVGLCLTYENQSAMKREDTKWQAGRDV 293
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>AK060822:Os02g0525900 |
          Length = 452

 Score = 25.4 bits (54), Expect = 9.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 126 QGKSVQSCPPI-NQPSMAEDDKRWYAGRPV 40
           QG +V  C    NQ +M  +D +W AGR V
Sbjct: 11  QGVAVGLCLTYENQSAMKREDTKWQAGRDV 40


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 5,580,643
Number of extensions: 109913
Number of successful extensions: 312
Number of sequences better than 10.0: 8
Number of HSP's gapped: 312
Number of HSP's successfully gapped: 8
Length of query: 67
Length of database: 15,399,855
Length adjustment: 39
Effective length of query: 28
Effective length of database: 13,838,256
Effective search space: 387471168
Effective search space used: 387471168
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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