| Clone Name | FLbaf13i07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830439.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN083I16, full insert sequence Length = 1240 Score = 755 bits (381), Expect = 0.0 Identities = 730/843 (86%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 76 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 135 Query: 137 agttgctagagctcagtctgaggaagatgctgccatgcaagaagttgttgatggggctga 196 |||||| ||||||||||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 136 agttgccagagctcagtccgaggaagaagctgctacagctgaagttgttgatggggctga 195 Query: 197 tctaggatatgtgggtgatgatactccggtttccagtgaagagcctttaagccccgcacc 256 ||||||| || |||||||||| | |||||||| || | |||| |||| || || || Sbjct: 196 tctaggaatcgtcagtgatgatacacaagtttccagcgatgggcctctaagtccggctcc 255 Query: 257 tggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaattgtaccagcgggtga 316 |||||||||||| || ||||| || |||||||| ||||| |||||||| | ||| ||||| Sbjct: 256 tggtgtggagacagtatgtgtttttcccaaaaacgctggcaaaattgtgctagcaggtga 315 Query: 317 agaaactgagcttttggttggcctgcaaaatgagggtgaatcaactttgaatgttgttgc 376 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 316 agaaactgaactactggttggcctgcaaaacgagggtgaatcaactttgaatgttgttgc 375 Query: 377 tgtccattcaaccctacatcttccttatgatcataagatgtacggacagaaccttacagt 436 | |||||||||| || |||||||||| ||| ||||||||||| ||||| |||||||| || Sbjct: 376 tatccattcaactctccatcttccttttgaccataagatgtatggacaaaaccttactgt 435 Query: 437 tcagagtttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatt 496 ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 436 tcagaacttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacatt 495 Query: 497 tgctgtgagcaaattcttgcagcctggagcatatgatcttgttggttacatagtgtacga 556 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 496 cgccgtgagcaagttcttgcagcctggagcatatgatctagttggttacatagtgtatga 555 Query: 557 gatcgattagcacccttatcagaacgtcttctacaatggcaccattgaggttgttgaggt 616 ||| ||| || |||| || ||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 556 gattgatcagaacccataccagaatgtcttttacaatggcactgtagaggttgttgaggc 615 Query: 617 tggagggttactgagtgttgaatctgtgttccttattacccttggaattgcacttcttgg 676 |||||| ||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 616 tggaggtttactcagcgttgagtctgtgttccttattacccttggagttgcccttcttgg 675 Query: 677 tctcctaggattgtgggcttatggtcaagtgcagcagctctcgaagaaaacaaagaaagg 736 |||| | ||||||||||| ||||||||||| || |||||||| |||||||||||||| | Sbjct: 676 tctcttcggattgtgggcatatggtcaagtacaacagctctcaaagaaaacaaagaaggc 735 Query: 737 ccccaaggtggaactcggaactggaacaactgatgccaacatggacgagtggctggaggg 796 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 736 ccccaaggtggaactgggaactggaactactgatgccaacatggatgagtggctggaggg 795 Query: 797 tacagcatttgcaaagg---acaaagccaagaaaaacaaatagattcgaggttgctgggc 853 || ||||||||| ||| |||| ||||||| || ||||||||| |||| || | Sbjct: 796 cactgcatttgcacagggaagcaaatccaagaagaagaaatagattggaggcccttgaac 855 Query: 854 -ctagctaaacat-ttcaggatctagaatgaggcaatggagggtagcccttcacaagtaa 911 |||| ||| ||| |||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 856 tctagttaatcattttcaggatctagaatgagacagttgagggtagcccttcacaagtaa 915 Query: 912 ctt 914 ||| Sbjct: 916 ctt 918
>emb|CT831138.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN120E16, full insert sequence Length = 1131 Score = 747 bits (377), Expect = 0.0 Identities = 729/843 (86%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 |||||||||||||||| || ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 109 tagggtttggctctcctccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 168 Query: 137 agttgctagagctcagtctgaggaagatgctgccatgcaagaagttgttgatggggctga 196 |||||| ||||||||||| |||||||| ||||| | |||||||||||||||||||| Sbjct: 169 agttgccagagctcagtccgaggaagaagctgctacagctgaagttgttgatggggctga 228 Query: 197 tctaggatatgtgggtgatgatactccggtttccagtgaagagcctttaagccccgcacc 256 ||||||| || |||||||||| | |||||||| || | |||| |||| || || || Sbjct: 229 tctaggaatcgtcagtgatgatacacaagtttccagcgatgggcctctaagtccggctcc 288 Query: 257 tggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaattgtaccagcgggtga 316 |||||||||||| || ||||| || |||||||| ||||| |||||||| | ||| ||||| Sbjct: 289 tggtgtggagacagtatgtgtttttcccaaaaacgctggcaaaattgtgctagcaggtga 348 Query: 317 agaaactgagcttttggttggcctgcaaaatgagggtgaatcaactttgaatgttgttgc 376 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 349 agaaactgaactactggttggcctgcaaaacgagggtgaatcaactttgaatgttgttgc 408 Query: 377 tgtccattcaaccctacatcttccttatgatcataagatgtacggacagaaccttacagt 436 | |||||||||| || |||||||||| ||| ||||||||||| ||||| |||||||| || Sbjct: 409 tatccattcaactctccatcttccttttgaccataagatgtatggacaaaaccttactgt 468 Query: 437 tcagagtttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatt 496 ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 469 tcagaacttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacatt 528 Query: 497 tgctgtgagcaaattcttgcagcctggagcatatgatcttgttggttacatagtgtacga 556 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 529 cgccgtgagcaagttcttgcagcctggagcatatgatctagttggttacatagtgtatga 588 Query: 557 gatcgattagcacccttatcagaacgtcttctacaatggcaccattgaggttgttgaggt 616 ||| ||| || |||| || ||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 589 gattgatcagaacccataccagaatgtcttttacaatggcactgtagaggttgttgaggc 648 Query: 617 tggagggttactgagtgttgaatctgtgttccttattacccttggaattgcacttcttgg 676 |||||| ||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 649 tggaggtttactcagcgttgagtctgtgttccttattacccttggagttgcccttcttgg 708 Query: 677 tctcctaggattgtgggcttatggtcaagtgcagcagctctcgaagaaaacaaagaaagg 736 |||| | ||||||||||| ||||||||||| || |||||||| |||||||||||||| | Sbjct: 709 tctcttcggattgtgggcatatggtcaagtacaacagctctcaaagaaaacaaagaaggc 768 Query: 737 ccccaaggtggaactcggaactggaacaactgatgccaacatggacgagtggctggaggg 796 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 769 ccccaaggtggaactgggaactggaactactgatgccaacatggatgagtggctggaggg 828 Query: 797 tacagcatttgcaaagg---acaaagccaagaaaaacaaatagattcgaggttgctgggc 853 || ||||||||| ||| |||| ||||||| || ||||||||| |||| || | Sbjct: 829 cactgcatttgcacagggaagcaaatccaagaagaagaaatagattggaggcccttgaac 888 Query: 854 -ctagctaaacat-ttcaggatctagaatgaggcaatggagggtagcccttcacaagtaa 911 |||| ||| ||| |||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 889 tctagttaatcattttcaggatctagaatgagacagttgagggtagcccttcacaagtaa 948 Query: 912 ctt 914 ||| Sbjct: 949 ctt 951
>ref|NM_001065120.1| Oryza sativa (japonica cultivar-group) Os06g0715500 (Os06g0715500) mRNA, complete cds Length = 1220 Score = 739 bits (373), Expect = 0.0 Identities = 728/843 (86%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 132 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 191 Query: 137 agttgctagagctcagtctgaggaagatgctgccatgcaagaagttgttgatggggctga 196 |||||| ||||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 192 agttgccagagctcagtccatggaagaagctgctacagctgaagttgttgatggggctga 251 Query: 197 tctaggatatgtgggtgatgatactccggtttccagtgaagagcctttaagccccgcacc 256 ||||||| || |||||||||| | |||||||| || | |||| |||| || || || Sbjct: 252 tctaggaatcgtcagtgatgatacacaagtttccagcgatgggcctctaagtccggctcc 311 Query: 257 tggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaattgtaccagcgggtga 316 |||||||||||| || ||||| || |||||||| ||||| |||||||| | ||| ||||| Sbjct: 312 tggtgtggagacagtatgtgtttttcccaaaaacgctggcaaaattgtgctagcaggtga 371 Query: 317 agaaactgagcttttggttggcctgcaaaatgagggtgaatcaactttgaatgttgttgc 376 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 372 agaaactgaactactggttggcctgcaaaacgagggtgaatcaactttgaatgttgttgc 431 Query: 377 tgtccattcaaccctacatcttccttatgatcataagatgtacggacagaaccttacagt 436 | |||||||||| || |||||||||| ||| ||||||||||| ||||| |||||||| || Sbjct: 432 tatccattcaactctccatcttccttttgaccataagatgtatggacaaaaccttactgt 491 Query: 437 tcagagtttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatt 496 ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 492 tcagaacttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacatt 551 Query: 497 tgctgtgagcaaattcttgcagcctggagcatatgatcttgttggttacatagtgtacga 556 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 552 cgccgtgagcaagttcttgcagcctggagcatatgatctagttggttacatagtgtatga 611 Query: 557 gatcgattagcacccttatcagaacgtcttctacaatggcaccattgaggttgttgaggt 616 ||| ||| || |||| || ||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 612 gattgatcagaacccataccagaatgtcttttacaatggcactgtagaggttgttgaggc 671 Query: 617 tggagggttactgagtgttgaatctgtgttccttattacccttggaattgcacttcttgg 676 |||||| ||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 672 tggaggtttactcagcgttgagtctgtgttccttattacccttggagttgcccttcttgg 731 Query: 677 tctcctaggattgtgggcttatggtcaagtgcagcagctctcgaagaaaacaaagaaagg 736 |||| | ||||||||||| ||||||||||| || |||||||| |||||||||||||| | Sbjct: 732 tctcttcggattgtgggcatatggtcaagtacaacagctctcaaagaaaacaaagaaggc 791 Query: 737 ccccaaggtggaactcggaactggaacaactgatgccaacatggacgagtggctggaggg 796 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 792 ccccaaggtggaactgggaactggaactactgatgccaacatggatgagtggctggaggg 851 Query: 797 tacagcatttgcaaagg---acaaagccaagaaaaacaaatagattcgaggttgctgggc 853 || ||||||||| ||| |||| ||||||| || ||||||||| |||| || | Sbjct: 852 cactgcatttgcacagggaagcaaatccaagaagaagaaatagattggaggcccttgaac 911 Query: 854 -ctagctaaacat-ttcaggatctagaatgaggcaatggagggtagcccttcacaagtaa 911 |||| ||| ||| |||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 912 tctagttaatcattttcaggatctagaatgagacagttgagggtagcccttcacaagtaa 971 Query: 912 ctt 914 ||| Sbjct: 972 ctt 974
>dbj|AK060137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E05, full insert sequence Length = 1072 Score = 739 bits (373), Expect = 0.0 Identities = 728/843 (86%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 110 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 169 Query: 137 agttgctagagctcagtctgaggaagatgctgccatgcaagaagttgttgatggggctga 196 |||||| ||||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 170 agttgccagagctcagtccatggaagaagctgctacagctgaagttgttgatggggctga 229 Query: 197 tctaggatatgtgggtgatgatactccggtttccagtgaagagcctttaagccccgcacc 256 ||||||| || |||||||||| | |||||||| || | |||| |||| || || || Sbjct: 230 tctaggaatcgtcagtgatgatacacaagtttccagcgatgggcctctaagtccggctcc 289 Query: 257 tggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaattgtaccagcgggtga 316 |||||||||||| || ||||| || |||||||| ||||| |||||||| | ||| ||||| Sbjct: 290 tggtgtggagacagtatgtgtttttcccaaaaacgctggcaaaattgtgctagcaggtga 349 Query: 317 agaaactgagcttttggttggcctgcaaaatgagggtgaatcaactttgaatgttgttgc 376 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 350 agaaactgaactactggttggcctgcaaaacgagggtgaatcaactttgaatgttgttgc 409 Query: 377 tgtccattcaaccctacatcttccttatgatcataagatgtacggacagaaccttacagt 436 | |||||||||| || |||||||||| ||| ||||||||||| ||||| |||||||| || Sbjct: 410 tatccattcaactctccatcttccttttgaccataagatgtatggacaaaaccttactgt 469 Query: 437 tcagagtttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatt 496 ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 470 tcagaacttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacatt 529 Query: 497 tgctgtgagcaaattcttgcagcctggagcatatgatcttgttggttacatagtgtacga 556 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 530 cgccgtgagcaagttcttgcagcctggagcatatgatctagttggttacatagtgtatga 589 Query: 557 gatcgattagcacccttatcagaacgtcttctacaatggcaccattgaggttgttgaggt 616 ||| ||| || |||| || ||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 590 gattgatcagaacccataccagaatgtcttttacaatggcactgtagaggttgttgaggc 649 Query: 617 tggagggttactgagtgttgaatctgtgttccttattacccttggaattgcacttcttgg 676 |||||| ||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 650 tggaggtttactcagcgttgagtctgtgttccttattacccttggagttgcccttcttgg 709 Query: 677 tctcctaggattgtgggcttatggtcaagtgcagcagctctcgaagaaaacaaagaaagg 736 |||| | ||||||||||| ||||||||||| || |||||||| |||||||||||||| | Sbjct: 710 tctcttcggattgtgggcatatggtcaagtacaacagctctcaaagaaaacaaagaaggc 769 Query: 737 ccccaaggtggaactcggaactggaacaactgatgccaacatggacgagtggctggaggg 796 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 770 ccccaaggtggaactgggaactggaactactgatgccaacatggatgagtggctggaggg 829 Query: 797 tacagcatttgcaaagg---acaaagccaagaaaaacaaatagattcgaggttgctgggc 853 || ||||||||| ||| |||| ||||||| || ||||||||| |||| || | Sbjct: 830 cactgcatttgcacagggaagcaaatccaagaagaagaaatagattggaggcccttgaac 889 Query: 854 -ctagctaaacat-ttcaggatctagaatgaggcaatggagggtagcccttcacaagtaa 911 |||| ||| ||| |||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 890 tctagttaatcattttcaggatctagaatgagacagttgagggtagcccttcacaagtaa 949 Query: 912 ctt 914 ||| Sbjct: 950 ctt 952
>dbj|AK059749.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A09, full insert sequence Length = 1164 Score = 739 bits (373), Expect = 0.0 Identities = 728/843 (86%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 76 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 135 Query: 137 agttgctagagctcagtctgaggaagatgctgccatgcaagaagttgttgatggggctga 196 |||||| ||||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 136 agttgccagagctcagtccatggaagaagctgctacagctgaagttgttgatggggctga 195 Query: 197 tctaggatatgtgggtgatgatactccggtttccagtgaagagcctttaagccccgcacc 256 ||||||| || |||||||||| | |||||||| || | |||| |||| || || || Sbjct: 196 tctaggaatcgtcagtgatgatacacaagtttccagcgatgggcctctaagtccggctcc 255 Query: 257 tggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaattgtaccagcgggtga 316 |||||||||||| || ||||| || |||||||| ||||| |||||||| | ||| ||||| Sbjct: 256 tggtgtggagacagtatgtgtttttcccaaaaacgctggcaaaattgtgctagcaggtga 315 Query: 317 agaaactgagcttttggttggcctgcaaaatgagggtgaatcaactttgaatgttgttgc 376 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 316 agaaactgaactactggttggcctgcaaaacgagggtgaatcaactttgaatgttgttgc 375 Query: 377 tgtccattcaaccctacatcttccttatgatcataagatgtacggacagaaccttacagt 436 | |||||||||| || |||||||||| ||| ||||||||||| ||||| |||||||| || Sbjct: 376 tatccattcaactctccatcttccttttgaccataagatgtatggacaaaaccttactgt 435 Query: 437 tcagagtttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatt 496 ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 436 tcagaacttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacatt 495 Query: 497 tgctgtgagcaaattcttgcagcctggagcatatgatcttgttggttacatagtgtacga 556 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 496 cgccgtgagcaagttcttgcagcctggagcatatgatctagttggttacatagtgtatga 555 Query: 557 gatcgattagcacccttatcagaacgtcttctacaatggcaccattgaggttgttgaggt 616 ||| ||| || |||| || ||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 556 gattgatcagaacccataccagaatgtcttttacaatggcactgtagaggttgttgaggc 615 Query: 617 tggagggttactgagtgttgaatctgtgttccttattacccttggaattgcacttcttgg 676 |||||| ||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 616 tggaggtttactcagcgttgagtctgtgttccttattacccttggagttgcccttcttgg 675 Query: 677 tctcctaggattgtgggcttatggtcaagtgcagcagctctcgaagaaaacaaagaaagg 736 |||| | ||||||||||| ||||||||||| || |||||||| |||||||||||||| | Sbjct: 676 tctcttcggattgtgggcatatggtcaagtacaacagctctcaaagaaaacaaagaaggc 735 Query: 737 ccccaaggtggaactcggaactggaacaactgatgccaacatggacgagtggctggaggg 796 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 736 ccccaaggtggaactgggaactggaactactgatgccaacatggatgagtggctggaggg 795 Query: 797 tacagcatttgcaaagg---acaaagccaagaaaaacaaatagattcgaggttgctgggc 853 || ||||||||| ||| |||| ||||||| || ||||||||| |||| || | Sbjct: 796 cactgcatttgcacagggaagcaaatccaagaagaagaaatagattggaggcccttgaac 855 Query: 854 -ctagctaaacat-ttcaggatctagaatgaggcaatggagggtagcccttcacaagtaa 911 |||| ||| ||| |||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 856 tctagttaatcattttcaggatctagaatgagacagttgagggtagcccttcacaagtaa 915 Query: 912 ctt 914 ||| Sbjct: 916 ctt 918
>dbj|AK100782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120J15, full insert sequence Length = 1221 Score = 731 bits (369), Expect = 0.0 Identities = 727/843 (86%), Gaps = 5/843 (0%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 133 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 192 Query: 137 agttgctagagctcagtctgaggaagatgctgccatgcaagaagttgttgatggggctga 196 |||||| ||||||||||| |||||| ||||| | |||||||||||||||||||| Sbjct: 193 agttgccagagctcagtccatggaagaagctgctacagctgaagttgttgatggggctga 252 Query: 197 tctaggatatgtgggtgatgatactccggtttccagtgaagagcctttaagccccgcacc 256 ||||||| || |||||||||| | |||||||| || | |||| |||| || || || Sbjct: 253 tctaggaatcgtcagtgatgatacacaagtttccagcgatgggcctctaagtccggctcc 312 Query: 257 tggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaattgtaccagcgggtga 316 |||||||||||| || ||||| || |||||||| ||||| |||||||| | ||| ||||| Sbjct: 313 tggtgtggagacagtatgtgtttttcccaaaaacgctggcaaaattgtgctagcaggtga 372 Query: 317 agaaactgagcttttggttggcctgcaaaatgagggtgaatcaactttgaatgttgttgc 376 ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 373 agaaactgaactactggttggcctgcaaaacgagggtgaatcaactttgaatgttgttgc 432 Query: 377 tgtccattcaaccctacatcttccttatgatcataagatgtacggacagaaccttacagt 436 | |||||||||| || |||||||||| ||| ||||||||||| ||||| |||||||| || Sbjct: 433 tatccattcaactctccatcttccttttgaccataagatgtatggacaaaaccttactgt 492 Query: 437 tcagagtttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatt 496 ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 493 tcagaacttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacatt 552 Query: 497 tgctgtgagcaaattcttgcagcctggagcatatgatcttgttggttacatagtgtacga 556 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 553 cgccgtgagcaagttcttgcagcctggagcatatgatctagttggttacatagtgtatga 612 Query: 557 gatcgattagcacccttatcagaacgtcttctacaatggcaccattgaggttgttgaggt 616 ||| ||| || |||| || ||||| ||||| ||||||||||| | ||||||||||||| Sbjct: 613 gattgatcagaacccataccagaatgtcttttacaatggcactgtagaggttgttgaggc 672 Query: 617 tggagggttactgagtgttgaatctgtgttccttattacccttggaattgcacttcttgg 676 |||||| ||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 673 tggaggtttactcagcgttgagtctgtgttccttattacccttggagttgcccttcttgg 732 Query: 677 tctcctaggattgtgggcttatggtcaagtgcagcagctctcgaagaaaacaaagaaagg 736 |||| | ||||||||||| ||||||||||| || |||||||| ||||| |||||||| | Sbjct: 733 tctcttcggattgtgggcatatggtcaagtacaacagctctcaaagaagacaaagaaggc 792 Query: 737 ccccaaggtggaactcggaactggaacaactgatgccaacatggacgagtggctggaggg 796 ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 793 ccccaaggtggaactgggaactggaactactgatgccaacatggatgagtggctggaggg 852 Query: 797 tacagcatttgcaaagg---acaaagccaagaaaaacaaatagattcgaggttgctgggc 853 || ||||||||| ||| |||| ||||||| || ||||||||| |||| || | Sbjct: 853 cactgcatttgcacagggaagcaaatccaagaagaagaaatagattggaggcccttgaac 912 Query: 854 -ctagctaaacat-ttcaggatctagaatgaggcaatggagggtagcccttcacaagtaa 911 |||| ||| ||| |||||||||||||||||| || | |||||||||||||||||||||| Sbjct: 913 tctagttaatcattttcaggatctagaatgagacagttgagggtagcccttcacaagtaa 972 Query: 912 ctt 914 ||| Sbjct: 973 ctt 975
>gb|BT017686.1| Zea mays clone EL01N0444B10.c mRNA sequence Length = 1066 Score = 652 bits (329), Expect = 0.0 Identities = 640/741 (86%), Gaps = 7/741 (0%) Strand = Plus / Plus Query: 61 ggccggccatggcggttagggtttggctctccgccatcctcctcgtcttcctcctcgctg 120 |||| ||||||||| |||||||| |||| ||||| ||||||||| ||||||||||| | Sbjct: 34 ggccagccatggcgactagggttttgctcaccgccctcctcctcgccttcctcctcgtcg 93 Query: 121 cctcccccttc---gcccaagttgctagagctcagtctgaggaagatgctgccatgcaa- 176 || |||| ||| |||| ||||||||||||| | || |||||||||||||| |||| Sbjct: 94 ccacccctttcaccgcccgagttgctagagctgattcggaggaagatgctgc--tgcagc 151 Query: 177 -gaagttgttgatggggctgatctaggatatgtgggtgatgatactccggtttccagtga 235 || |||||||| |||||||||||||| ||||||||||||||| | |||||||||||| Sbjct: 152 tgaggttgttgaaggggctgatctaggtattgtgggtgatgatacacaggtttccagtga 211 Query: 236 agagcctttaagccccgcacctggtgtggagactgtttgtgtcttccccaaaaatgctgg 295 | ||||||||||| || |||||||| ||||| || ||| ||||||||||||||||| Sbjct: 212 tggacctttaagccctgctcctggtgtagagacagtagttgtattccccaaaaatgctgg 271 Query: 296 gaaaattgtaccagcgggtgaagaaactgagcttttggttggcctgcaaaatgagggtga 355 |||||||||| ||| |||||||||||||| | | ||||| ||||||||||||||||| Sbjct: 272 caaaattgtactagcaggtgaagaaactgaattactagttggtctgcaaaatgagggtga 331 Query: 356 atcaactttgaatgttgttgctgtccattcaaccctacatcttccttatgatcataagat 415 ||| |||||||||||||||||||| |||||||| || |||||||||| ||| ||||| || Sbjct: 332 atcgactttgaatgttgttgctgttcattcaactctccatcttccttttgaccataatat 391 Query: 416 gtacggacagaaccttacagttcagagtttctacaatgcatcagttcctgtctctgtgca 475 ||| || ||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||| Sbjct: 392 gtatggccagaaccttactgttcagaatttcttcaacgcatcagttcctgtttctgtgca 451 Query: 476 agcaacctttccctatacatttgctgtgagcaaattcttgcagcctggagcatatgatct 535 ||||||||| || |||| ||| | ||||||||| ||||||||||||||||| |||||||| Sbjct: 452 agcaaccttcccttataaattcgttgtgagcaagttcttgcagcctggagcttatgatct 511 Query: 536 tgttggttacatagtgtacgagatcgattagcacccttatcagaacgtcttctacaatgg 595 ||||||||||||||||| |||||||| |||||||||| ||||| || ||||||||||| Sbjct: 512 ggttggttacatagtgtatgagatcgaccagcacccttaccagaatgtattctacaatgg 571 Query: 596 caccattgaggttgttgaggttggagggttactgagtgttgaatctgtgttccttattac 655 ||| |||||||| ||||||| |||||| ||||| |||||||| ||||||||||| || || Sbjct: 572 cactattgaggtcgttgaggctggaggcttactcagtgttgagtctgtgttcctcatcac 631 Query: 656 ccttggaattgcacttcttggtctcctaggattgtgggcttatggtcaagtgcagcagct 715 ||||||||| || |||||||||||| | ||||| ||||| ||||| || || |||||||| Sbjct: 632 ccttggaatcgctcttcttggtctctttggattatgggcatatggccaggttcagcagct 691 Query: 716 ctcgaagaaaacaaagaaaggccccaaggtggaactcggaactggaacaactgatgccaa 775 |||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||||| Sbjct: 692 ctcgaagaaaacgaagaaggcccccaaggtggagctcggaactggaacaactgatgccaa 751 Query: 776 catggacgagtggctggaggg 796 ||| || |||||||||||||| Sbjct: 752 catcgatgagtggctggaggg 772 Score = 67.9 bits (34), Expect = 7e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 869 aggatctagaatgaggcaatggagggtagcccttcacaagtaactt 914 |||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 848 aggatctagaatgaggcatttgagggtagcccttcacaagtgactt 893 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 965 ttgttgacaccattttcgaccttg 988 |||||||||||||||||||||||| Sbjct: 954 ttgttgacaccattttcgaccttg 977
>gb|BT016857.1| Zea mays clone Contig690 mRNA sequence Length = 1069 Score = 617 bits (311), Expect = e-173 Identities = 631/735 (85%), Gaps = 7/735 (0%) Strand = Plus / Minus Query: 67 ccatggcggttagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctccc 126 |||||||| ||||||||||||| ||||| |||| || | |||||| |||| ||||||| Sbjct: 1005 ccatggcgactagggtttggctcaccgccctcctgcttggtttcctcgtcgccgcctccc 946 Query: 127 ccttcgcc---caagttgctagagctcagtctgaggaagatgctgccatgcaa--gaagt 181 ||||| || | ||||||||||||| | || |||||||||||||| |||| || || Sbjct: 945 ccttcaccggccgagttgctagagctgaatccgaggaagatgctgc--tgcagctgaggt 888 Query: 182 tgttgatggggctgatctaggatatgtgggtgatgatactccggtttccagtgaagagcc 241 |||||| |||||||||||||| ||||||||||||||| | |||||||||||| | || Sbjct: 887 tgttgaaggggctgatctaggtattgtgggtgatgatacacaggtttccagtgatggacc 828 Query: 242 tttaagccccgcacctggtgtggagactgtttgtgtcttccccaaaaatgctgggaaaat 301 |||||| || || |||||||| ||||| || ||||||||| ||||||||||| ||||| Sbjct: 827 tttaagtcctgctcctggtgtagagacagtagttgtcttcccaaaaaatgctggcaaaat 768 Query: 302 tgtaccagcgggtgaagaaactgagcttttggttggcctgcaaaatgagggtgaatcaac 361 ||||| ||| |||||||||||||| | | ||||| ||||||||||| |||||||||| Sbjct: 767 tgtactagcaggtgaagaaactgaattactagttggtctgcaaaatgacggtgaatcaat 708 Query: 362 tttgaatgttgttgctgtccattcaaccctacatcttccttatgatcataagatgtacgg 421 |||||||||||||||||| |||||||| || |||||||||| ||| || || ||||| || Sbjct: 707 tttgaatgttgttgctgttcattcaactctccatcttccttttgaccacaatatgtatgg 648 Query: 422 acagaaccttacagttcagagtttctacaatgcatcagttcctgtctctgtgcaagcaac 481 ||||||||||| ||||||| ||||| |||| ||||||||||||| ||||| |||||||| Sbjct: 647 ccagaaccttactgttcagaatttcttcaattcatcagttcctgtttctgtacaagcaac 588 Query: 482 ctttccctatacatttgctgtgagcaaattcttgcagcctggagcatatgatcttgttgg 541 ||| ||||| | || | ||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 587 cttcccctacaagttcgttgtgagcaagttcttgcagcctggagcatatgatctggttgg 528 Query: 542 ttacatagtgtacgagatcgattagcacccttatcagaacgtcttctacaatggcaccat 601 |||||||||||| |||||||| |||||||||| ||||| || |||||||||||||| || Sbjct: 527 ttacatagtgtatgagatcgaccagcacccttaccagaatgtattctacaatggcactat 468 Query: 602 tgaggttgttgaggttggagggttactgagtgttgaatctgtgttccttattacccttgg 661 ||||||||||||| |||||| ||||| |||||||| ||||||||||| || |||||||| Sbjct: 467 cgaggttgttgaggctggaggcttactcagtgttgagtctgtgttcctcatcacccttgg 408 Query: 662 aattgcacttcttggtctcctaggattgtgggcttatggtcaagtgcagcagctctcgaa 721 | |||||||||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 407 atttgcacttcttggtctgtttggattgtgggcatatggccaggttcagcagctctcgaa 348 Query: 722 gaaaacaaagaaaggccccaaggtggaactcggaactggaacaactgatgccaacatgga 781 |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 347 gaaaacaaagaaggcacccaaggtggagctcggaactggaacaactgatgccaacatcga 288 Query: 782 cgagtggctggaggg 796 |||||||||||||| Sbjct: 287 tgagtggctggaggg 273 Score = 67.9 bits (34), Expect = 7e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 869 aggatctagaatgaggcaatggagggtagcccttcacaagtaactt 914 |||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 197 aggatctagaatgaggcatttgagggtagcccttcacaagtgactt 152
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 220 bits (111), Expect = 8e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggttacatagtgtacgagatcgattagcaccc 571 |||||||||||||||||||||||| ||||||||||||||||| ||||| ||| || |||| Sbjct: 29857804 cttgcagcctggagcatatgatctagttggttacatagtgtatgagattgatcagaaccc 29857863 Query: 572 ttatcagaacgtcttctacaatggcaccattgaggttgttgaggttggagggttactgag 631 || ||||| ||||| ||||||||||| | ||||||||||||| |||||| ||||| || Sbjct: 29857864 ataccagaatgtcttttacaatggcactgtagaggttgttgaggctggaggtttactcag 29857923 Query: 632 tgttgaatctgtgttccttattacccttggaattgcacttcttggtctcctaggattgtg 691 ||||| |||||||||||||||||||||||| |||| |||||||||||| | |||||||| Sbjct: 29857924 cgttgagtctgtgttccttattacccttggagttgcccttcttggtctcttcggattgtg 29857983 Query: 692 ggcttatggtcaagtgcagcagctctc 718 ||| ||||||||||| || |||||||| Sbjct: 29857984 ggcatatggtcaagtacaacagctctc 29858010 Score = 115 bits (58), Expect = 3e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 351 ggtgaatcaactttgaatgttgttgctgtccattcaaccctacatcttccttatgatcat 410 ||||||||||||||||||||||||||| |||||||||| || |||||||||| ||| ||| Sbjct: 29857188 ggtgaatcaactttgaatgttgttgctatccattcaactctccatcttccttttgaccat 29857247 Query: 411 aagatgtacggacagaaccttacagttcag 440 |||||||| ||||| |||||||| |||||| Sbjct: 29857248 aagatgtatggacaaaaccttactgttcag 29857277 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 721 agaaaacaaagaaaggccccaaggtggaactcggaactggaacaactgatgccaacatgg 780 ||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 29858099 agaaaacaaagaaggcccccaaggtggaactgggaactggaactactgatgccaacatgg 29858158 Query: 781 acgagtggctggagg 795 | ||||||||||||| Sbjct: 29858159 atgagtggctggagg 29858173 Score = 101 bits (51), Expect = 5e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 444 ttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatttgctgtg 503 |||| |||||||||||||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 29857635 ttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacattcgccgtg 29857694 Query: 504 agcaaattcttgcag 518 ||||| ||||||||| Sbjct: 29857695 agcaagttcttgcag 29857709 Score = 79.8 bits (40), Expect = 2e-11 Identities = 103/124 (83%) Strand = Plus / Plus Query: 177 gaagttgttgatggggctgatctaggatatgtgggtgatgatactccggtttccagtgaa 236 ||||||||||||||||||||||||||| || |||||||||| | |||||||| || Sbjct: 29856057 gaagttgttgatggggctgatctaggaatcgtcagtgatgatacacaagtttccagcgat 29856116 Query: 237 gagcctttaagccccgcacctggtgtggagactgtttgtgtcttccccaaaaatgctggg 296 | |||| |||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 29856117 gggcctctaagtccggctcctggtgtggagacagtatgtgtttttcccaaaaacgctggc 29856176 Query: 297 aaaa 300 |||| Sbjct: 29856177 aaaa 29856180 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 29855267 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 29855326 Query: 137 ag 138 || Sbjct: 29855327 ag 29855328 Score = 75.8 bits (38), Expect = 3e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 865 tttcaggatctagaatgaggcaatggagggtagcccttcacaagtaactt 914 ||||||||||||||||||| || | ||||||||||||||||||||||||| Sbjct: 29858337 tttcaggatctagaatgagacagttgagggtagcccttcacaagtaactt 29858386 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 312 ggtgaagaaactgagcttttggttggcctgcaaaatgagggt 353 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 29856477 ggtgaagaaactgaactactggttggcctgcaaaacgagggt 29856518
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 220 bits (111), Expect = 8e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggttacatagtgtacgagatcgattagcaccc 571 |||||||||||||||||||||||| ||||||||||||||||| ||||| ||| || |||| Sbjct: 53317 cttgcagcctggagcatatgatctagttggttacatagtgtatgagattgatcagaaccc 53376 Query: 572 ttatcagaacgtcttctacaatggcaccattgaggttgttgaggttggagggttactgag 631 || ||||| ||||| ||||||||||| | ||||||||||||| |||||| ||||| || Sbjct: 53377 ataccagaatgtcttttacaatggcactgtagaggttgttgaggctggaggtttactcag 53436 Query: 632 tgttgaatctgtgttccttattacccttggaattgcacttcttggtctcctaggattgtg 691 ||||| |||||||||||||||||||||||| |||| |||||||||||| | |||||||| Sbjct: 53437 cgttgagtctgtgttccttattacccttggagttgcccttcttggtctcttcggattgtg 53496 Query: 692 ggcttatggtcaagtgcagcagctctc 718 ||| ||||||||||| || |||||||| Sbjct: 53497 ggcatatggtcaagtacaacagctctc 53523 Score = 115 bits (58), Expect = 3e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 351 ggtgaatcaactttgaatgttgttgctgtccattcaaccctacatcttccttatgatcat 410 ||||||||||||||||||||||||||| |||||||||| || |||||||||| ||| ||| Sbjct: 52701 ggtgaatcaactttgaatgttgttgctatccattcaactctccatcttccttttgaccat 52760 Query: 411 aagatgtacggacagaaccttacagttcag 440 |||||||| ||||| |||||||| |||||| Sbjct: 52761 aagatgtatggacaaaaccttactgttcag 52790 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 721 agaaaacaaagaaaggccccaaggtggaactcggaactggaacaactgatgccaacatgg 780 ||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 53612 agaaaacaaagaaggcccccaaggtggaactgggaactggaactactgatgccaacatgg 53671 Query: 781 acgagtggctggagg 795 | ||||||||||||| Sbjct: 53672 atgagtggctggagg 53686 Score = 101 bits (51), Expect = 5e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 444 ttctacaatgcatcagttcctgtctctgtgcaagcaacctttccctatacatttgctgtg 503 |||| |||||||||||||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 53148 ttcttcaatgcatcagttcctgtctctgtacaagcaacctttccgtatacattcgccgtg 53207 Query: 504 agcaaattcttgcag 518 ||||| ||||||||| Sbjct: 53208 agcaagttcttgcag 53222 Score = 79.8 bits (40), Expect = 2e-11 Identities = 103/124 (83%) Strand = Plus / Plus Query: 177 gaagttgttgatggggctgatctaggatatgtgggtgatgatactccggtttccagtgaa 236 ||||||||||||||||||||||||||| || |||||||||| | |||||||| || Sbjct: 51570 gaagttgttgatggggctgatctaggaatcgtcagtgatgatacacaagtttccagcgat 51629 Query: 237 gagcctttaagccccgcacctggtgtggagactgtttgtgtcttccccaaaaatgctggg 296 | |||| |||| || || |||||||||||||| || ||||| || |||||||| ||||| Sbjct: 51630 gggcctctaagtccggctcctggtgtggagacagtatgtgtttttcccaaaaacgctggc 51689 Query: 297 aaaa 300 |||| Sbjct: 51690 aaaa 51693 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 77 tagggtttggctctccgccatcctcctcgtcttcctcctcgctgcctcccccttcgccca 136 ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||| Sbjct: 50780 tagggtttggctctccgccctcctcctcgccttcctcctcgccgccgcccccgtcgtcca 50839 Query: 137 ag 138 || Sbjct: 50840 ag 50841 Score = 75.8 bits (38), Expect = 3e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 865 tttcaggatctagaatgaggcaatggagggtagcccttcacaagtaactt 914 ||||||||||||||||||| || | ||||||||||||||||||||||||| Sbjct: 53850 tttcaggatctagaatgagacagttgagggtagcccttcacaagtaactt 53899 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 312 ggtgaagaaactgagcttttggttggcctgcaaaatgagggt 353 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 51990 ggtgaagaaactgaactactggttggcctgcaaaacgagggt 52031
>gb|BT018669.1| Zea mays clone EL01N0510C10.d mRNA sequence Length = 1597 Score = 81.8 bits (41), Expect = 5e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 630 agtgttgaatctgtgttccttattacccttggaattgcacttcttggtctcctaggattg 689 |||||||| ||||||||||| | | |||||||||||| |||||||||||| | | |||| Sbjct: 467 agtgttgagtctgtgttcctcgtcatccttggaattgcccttcttggtctctttgtattg 526 Query: 690 tgggcttatggtcaagtgcagcagctctcgaag 722 ||||| ||||| ||||| ||||||||| ||||| Sbjct: 527 tgggcatatggccaagttcagcagctcgcgaag 559
>emb|CU024876.6| M.truncatula DNA sequence from clone MTH2-144H1 on chromosome 3, complete sequence Length = 137872 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 636 gaatctgtgttccttattacccttggaattgcacttctt 674 |||||||| |||||| |||| |||||||||||||||||| Sbjct: 37804 gaatctgttttcctttttactcttggaattgcacttctt 37766
>gb|AC189480.1| Brassica rapa subsp. pekinensis clone KBrB082F21, complete sequence Length = 131291 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 576 cagaacgtcttctacaatggcaccattgaggttgttga 613 |||| ||||||||||||||| ||||||||||| ||||| Sbjct: 54784 cagagcgtcttctacaatgggaccattgaggtagttga 54821 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 54193 catcttccttatgatcataag 54213
>gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1021 acaattttgttgaaggtaaatgtta 1045 ||||||||||||||||||||||||| Sbjct: 184740 acaattttgttgaaggtaaatgtta 184716
>emb|CT831908.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA232A10, full insert sequence Length = 1108 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||||| Sbjct: 309 catcctcctcgtcttcctcctcgc 332
>ref|NM_001055580.1| Oryza sativa (japonica cultivar-group) Os03g0161600 (Os03g0161600) mRNA, complete cds Length = 1063 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||||| Sbjct: 314 catcctcctcgtcttcctcctcgc 337
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||||| Sbjct: 123253 catcctcctcgtcttcctcctcgc 123276
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 catcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||||| Sbjct: 3306072 catcctcctcgtcttcctcctcgc 3306049
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 catcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||||| Sbjct: 130834 catcctcctcgtcttcctcctcgc 130811
>dbj|AK107770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-B06, full insert sequence Length = 1065 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||||| Sbjct: 315 catcctcctcgtcttcctcctcgc 338
>ref|NM_001070307.1| Oryza sativa (japonica cultivar-group) Os09g0534000 (Os09g0534000) mRNA, complete cds Length = 1565 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 95 catcctcctcgtcttcctcctcg 117 ||||||||||||||||||||||| Sbjct: 442 catcctcctcgtcttcctcctcg 420
>ref|XM_505991.1| Yarrowia lipolytica CLIB122, YALI0F28457g predicted mRNA Length = 1797 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 773 caacatggacgagtggctggagg 795 ||||||||||||||||||||||| Sbjct: 783 caacatggacgagtggctggagg 805
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctcg 117 ||||||||||||||||||||||| Sbjct: 20684545 catcctcctcgtcttcctcctcg 20684567
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctcg 117 ||||||||||||||||||||||| Sbjct: 78156 catcctcctcgtcttcctcctcg 78178
>dbj|AK100026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146I06, full insert sequence Length = 1567 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 95 catcctcctcgtcttcctcctcg 117 ||||||||||||||||||||||| Sbjct: 443 catcctcctcgtcttcctcctcg 421
>gb|U28155.2|YLU28155 Yarrowia lipolytica intraorganellar peroxisomal translocation component Pay32p (PAY32) gene, complete cds Length = 2579 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 773 caacatggacgagtggctggagg 795 ||||||||||||||||||||||| Sbjct: 1228 caacatggacgagtggctggagg 1250
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 773 caacatggacgagtggctggagg 795 ||||||||||||||||||||||| Sbjct: 3619361 caacatggacgagtggctggagg 3619383
>ref|XM_422275.2| PREDICTED: Gallus gallus similar to BMP/Retinoic acid-inducible neurai-specific protein-2 (LOC424433), mRNA Length = 2404 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 149 catcctcctcgtcttcctcctc 170
>ref|NM_001050360.1| Oryza sativa (japonica cultivar-group) Os01g0670800 (Os01g0670800) mRNA, complete cds Length = 2811 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 ccgccatcctcctcgtcttcctcctc 116 ||||| |||||||||||||||||||| Sbjct: 213 ccgccctcctcctcgtcttcctcctc 188
>dbj|AK229410.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-67-G14 Length = 2736 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 525 gagactgtttgtgttttccccaaaaa 500 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 277 cttgcagcctggagcatttgatctggtgggtta 245 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 396 catcttccttatgatcataag 376
>ref|XM_001114911.1| PREDICTED: Macaca mulatta similar to splicing factor, arginine/serine-rich 14 (LOC719666), mRNA Length = 3661 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 87 ctctccgccatcctcctcgtcttcctcctc 116 ||||||||||||||| ||||| |||||||| Sbjct: 2770 ctctccgccatcctcatcgtcctcctcctc 2741
>ref|NM_001024806.2| Mus musculus CCAAT/enhancer binding protein zeta (Cebpz), mRNA Length = 4091 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 140 cgccatcctcctcgtcttcctc 119
>ref|NM_127686.2| Arabidopsis thaliana ATP binding (AT2G21160) mRNA, complete cds Length = 1094 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 290 gagactgtttgtgttttccccaaaaa 315 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 419 catcttccttatgatcataag 439 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 538 cttgcagcctggagcatttgatctggtgggtta 570
>gb|BT020421.1| Arabidopsis thaliana At2g21160 mRNA, complete cds Length = 777 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 193 gagactgtttgtgttttccccaaaaa 218 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 322 catcttccttatgatcataag 342 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 441 cttgcagcctggagcatttgatctggtgggtta 473
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 ttggctctccgccatcctcctcgtct 108 ||||||||||||||||||||| |||| Sbjct: 288016 ttggctctccgccatcctccttgtct 288041
>gb|AC136004.10| Mus musculus chromosome 7, clone RP23-235M8, complete sequence Length = 185174 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 ctctccgccatcctcctcgtcttcctcctc 116 ||||||| |||||||||| ||||||||||| Sbjct: 136060 ctctccgtcatcctcctcttcttcctcctc 136089
>ref|XM_593913.2| PREDICTED: Bos taurus similar to Iroquois related homeobox 3 (LOC540417), mRNA Length = 2539 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||| Sbjct: 1319 tcctcctcgtcttcctcctcgc 1298
>gb|AY135521.1|AY135520S2 Canis familiaris high mobility group B1 protein (HMGB1) gene, exons 2 through 5 and complete cds Length = 3959 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 2392 catcctcctcgtcttcctcctc 2371
>ref|NM_001002937.1| Canis familiaris high-mobility group box 1 (HMGB1), mRNA gb|AY135519.1| Canis familiaris high mobility group protein B1 mRNA, complete cds Length = 2236 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 669 catcctcctcgtcttcctcctc 648
>gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosome 13, complete sequence Length = 169973 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 87500 catcctcctcgtcttcctcctc 87521
>ref|XM_544403.2| PREDICTED: Canis familiaris similar to Iroquois related homeobox 3 (LOC487277), mRNA Length = 2198 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgc 118 |||||||||||||||||||||| Sbjct: 1223 tcctcctcgtcttcctcctcgc 1202
>gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosome 13, complete sequence Length = 193502 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 166062 catcctcctcgtcttcctcctc 166083
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 ctctccgccatcctcctcgtcttcctcctc 116 ||||||| |||||||||| ||||||||||| Sbjct: 220499 ctctccgtcatcctcctcttcttcctcctc 220528
>dbj|AK136173.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420469A13 product:CCAAT/enhancer binding protein zeta, full insert sequence Length = 2903 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 121 cgccatcctcctcgtcttcctc 100
>dbj|AK145374.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0028N04 product:CCAAT/enhancer binding protein zeta, full insert sequence Length = 3309 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 121 cgccatcctcctcgtcttcctc 100
>dbj|AK137728.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930118B19 product:CCAAT/enhancer binding protein zeta, full insert sequence Length = 420 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 112 cgccatcctcctcgtcttcctc 91
>dbj|AK155990.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830003F01 product:CCAAT/enhancer binding protein zeta, full insert sequence Length = 3310 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 121 cgccatcctcctcgtcttcctc 100
>dbj|AK159081.1| Mus musculus 12.5 days embryo Rathke's pouches cDNA, RIKEN full-length enriched library, clone:K920015C02 product:CCAAT/enhancer binding protein zeta, full insert sequence Length = 4070 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 137 cgccatcctcctcgtcttcctc 116
>dbj|AK158771.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430001D23 product:CCAAT/enhancer binding protein zeta, full insert sequence Length = 3304 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 117 cgccatcctcctcgtcttcctc 96
>gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103P23, complete sequence Length = 195574 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 166028 catcctcctcgtcttcctcctc 166049
>gb|AC006264.4| Arabidopsis thaliana chromosome 2 clone F26H11 map mi148, complete sequence Length = 93220 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 25981 gagactgtttgtgttttccccaaaaa 25956 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 25666 catcttccttatgatcataag 25646
>emb|CR676679.2|CNS0FL37 Tetraodon nigroviridis full-length cDNA Length = 1620 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 96 atcctcctcgtcttcctcctcgctgc 121 ||||||||||||||| |||||||||| Sbjct: 928 atcctcctcgtcttcatcctcgctgc 953
>emb|CR668564.2|CNS0FEU2 Tetraodon nigroviridis full-length cDNA Length = 1616 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 96 atcctcctcgtcttcctcctcgctgc 121 ||||||||||||||| |||||||||| Sbjct: 923 atcctcctcgtcttcatcctcgctgc 948
>emb|CR665394.2|CNS0FCE0 Tetraodon nigroviridis full-length cDNA Length = 662 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 catcctcctcgtcttcctcctc 116 |||||||||||||||||||||| Sbjct: 599 catcctcctcgtcttcctcctc 620
>emb|CR664799.2|CNS0FBXH Tetraodon nigroviridis full-length cDNA Length = 1465 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 96 atcctcctcgtcttcctcctcgctgc 121 ||||||||||||||| |||||||||| Sbjct: 776 atcctcctcgtcttcatcctcgctgc 801
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 ccgccatcctcctcgtcttcctcctc 116 ||||| |||||||||||||||||||| Sbjct: 27500227 ccgccctcctcctcgtcttcctcctc 27500252 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgctgcctcc 125 |||||||| ||||||||||||| |||||| Sbjct: 39992111 tcctcctcctcttcctcctcgccgcctcc 39992083
>emb|CR642336.2|CNS0EULI Tetraodon nigroviridis full-length cDNA Length = 1404 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 96 atcctcctcgtcttcctcctcgctgc 121 ||||||||||||||| |||||||||| Sbjct: 716 atcctcctcgtcttcatcctcgctgc 741
>ref|XM_686408.1| PREDICTED: Danio rerio similar to Dmx-like 1 (LOC563042), partial mRNA Length = 1404 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgctgcc 122 |||||||| ||||||||||||||||| Sbjct: 920 tcctcctcctcttcctcctcgctgcc 895
>gb|BC030188.1| Mus musculus cDNA clone IMAGE:5352277, **** WARNING: chimeric clone **** Length = 1465 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 135 cgccatcctcctcgtcttcctc 114
>gb|AY050351.1| Arabidopsis thaliana At2g21160/F26H11.8 mRNA, complete cds Length = 1040 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 236 gagactgtttgtgttttccccaaaaa 261 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 365 catcttccttatgatcataag 385 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 484 cttgcagcctggagcatttgatctggtgggtta 516
>gb|AY086796.1| Arabidopsis thaliana clone 27787 mRNA, complete sequence Length = 1068 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 263 gagactgtttgtgttttccccaaaaa 288 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 392 catcttccttatgatcataag 412 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 511 cttgcagcctggagcatttgatctggtgggtta 543
>emb|AL513442.1|NC3H10 Neurospora crassa DNA linkage group V Cosmid contig 3H10 Length = 89795 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 tctccgccatcctcctcgtcttcctc 113 ||||||||||| |||||||||||||| Sbjct: 66992 tctccgccatcatcctcgtcttcctc 67017
>emb|AL353819.1|NC8D4 Neurospora crassa DNA linkage group V Cosmid contig 8D4 Length = 46300 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 tctccgccatcctcctcgtcttcctc 113 ||||||||||| |||||||||||||| Sbjct: 8352 tctccgccatcatcctcgtcttcctc 8377
>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1125_C04 Length = 98476 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 ccgccatcctcctcgtcttcctcctc 116 ||||| |||||||||||||||||||| Sbjct: 20930 ccgccctcctcctcgtcttcctcctc 20955
>ref|XM_956508.1| Neurospora crassa OR74A related to PRP9 protein [MIPS] (NCU01235.1) partial mRNA Length = 1494 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 tctccgccatcctcctcgtcttcctc 113 ||||||||||| |||||||||||||| Sbjct: 1109 tctccgccatcatcctcgtcttcctc 1084
>ref|XM_567654.1| Cryptococcus neoformans var. neoformans JEC21 tbc1 domain family protein (CNK00910) partial mRNA Length = 1917 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 83 ttggctctccgccatcctcctcgtct 108 ||||||||||||||||||||| |||| Sbjct: 219 ttggctctccgccatcctccttgtct 194
>emb|BX820894.1|CNS0A8R0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 177 gagactgtttgtgttttccccaaaaa 202 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 306 catcttccttatgatcataag 326 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 425 cttgcagcctggagcatttgatctggtgggtta 457
>emb|BX820437.1|CNS0A80G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1027 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 238 gagactgtttgtgttttccccaaaaa 263 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 367 catcttccttatgatcataag 387 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 486 cttgcagcctggagcatttgatctggtgggtta 518
>gb|AC154274.1| Mus musculus BAC clone RP24-298J16 from 17, complete sequence Length = 150755 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 117428 cgccatcctcctcgtcttcctc 117449
>gb|U19892.1|MMU19892 Mus musculus putative CCAAT binding factor 2 (mCBF) mRNA, alternatively spliced transcript mCBF2, complete cds Length = 2919 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 111 cgccatcctcctcgtcttcctc 90
>gb|U19891.1|MMU19891 Mus musculus putative CCAAT binding factor 1 (mCBF) mRNA, alternatively spliced transcript mCBF1, complete cds Length = 3302 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctc 113 |||||||||||||||||||||| Sbjct: 111 cgccatcctcctcgtcttcctc 90
>gb|L32016.1|ATHTRAP Arabidopsis thaliana TRAP mRNA, partial cds Length = 968 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 264 gagactgtttgtgtcttccccaaaaa 289 |||||||||||||| ||||||||||| Sbjct: 178 gagactgtttgtgttttccccaaaaa 203 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 catcttccttatgatcataag 413 ||||||||||||||||||||| Sbjct: 307 catcttccttatgatcataag 327 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 512 cttgcagcctggagcatatgatcttgttggtta 544 ||||||||||||||||| |||||| || ||||| Sbjct: 426 cttgcagcctggagcatttgatctggtgggtta 458
>dbj|AB071291.1| Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN-like protein 2, complete cds Length = 2811 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 91 ccgccatcctcctcgtcttcctcctc 116 ||||| |||||||||||||||||||| Sbjct: 213 ccgccctcctcctcgtcttcctcctc 188
>gb|AC191368.3| Pan troglodytes BAC clone CH251-649E5 from chromosome x, complete sequence Length = 205110 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 713 gctctcgaagaaaacaaagaa 733 ||||||||||||||||||||| Sbjct: 69179 gctctcgaagaaaacaaagaa 69199
>ref|XM_423483.2| PREDICTED: Gallus gallus hypothetical LOC425762 (LOC425762), mRNA Length = 1228 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgctgc 121 ||||||||||| ||||||||||||| Sbjct: 443 tcctcctcgtcctcctcctcgctgc 419
>ref|XM_001232972.1| PREDICTED: Gallus gallus hypothetical protein LOC769682 (LOC769682), mRNA Length = 1147 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgctgc 121 ||||||||||| ||||||||||||| Sbjct: 443 tcctcctcgtcctcctcctcgctgc 419
>emb|CT835520.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA021D24, full insert sequence Length = 836 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcgctgcctcc 125 |||||||| ||||||||||||| |||||| Sbjct: 191 tcctcctcctcttcctcctcgccgcctcc 219
>dbj|AK240939.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065041P21, full insert sequence Length = 854 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcgctgcctcc 125 |||||||| ||||||||||||| |||||| Sbjct: 212 tcctcctcctcttcctcctcgccgcctcc 240
>dbj|AK243440.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100068F05, full insert sequence Length = 2353 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctcctc 116 |||||||||| |||||||||||||| Sbjct: 327 cgccatcctcatcgtcttcctcctc 303
>ref|NM_001054514.1| Oryza sativa (japonica cultivar-group) Os02g0724600 (Os02g0724600) mRNA, complete cds Length = 2109 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctcctc 116 |||||||||| |||||||||||||| Sbjct: 313 cgccatcctcatcgtcttcctcctc 289
>ref|NM_001054407.1| Oryza sativa (japonica cultivar-group) Os02g0706600 (Os02g0706600) mRNA, complete cds Length = 1539 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 338 tcctcctcgtcttcctcctcg 318
>ref|NM_001051735.1| Oryza sativa (japonica cultivar-group) Os01g0917300 (Os01g0917300) mRNA, complete cds Length = 798 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcgctgcctcc 125 |||||||| ||||||||||||| |||||| Sbjct: 458 tcctcctcctcttcctcctcgccgcctcc 486
>gb|BC123904.1| Bos taurus cDNA clone MGC:151567 IMAGE:8310676, complete cds Length = 1726 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 ttgaatgttgttgctgtccat 383 ||||||||||||||||||||| Sbjct: 834 ttgaatgttgttgctgtccat 814
>ref|XM_001141477.1| PREDICTED: Pan troglodytes ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6), mRNA Length = 3085 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 86 gctctccgccatcctcctcgtcttcctcctcgc 118 ||||| ||||||||| |||| |||||||||||| Sbjct: 1330 gctcttcgccatccttctcgccttcctcctcgc 1362
>ref|XM_001084622.1| PREDICTED: Macaca mulatta similar to ADP-ribosylation-like factor 6 interacting protein 6 (LOC695619), mRNA Length = 2804 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 86 gctctccgccatcctcctcgtcttcctcctcgc 118 ||||| ||||||||| |||| |||||||||||| Sbjct: 1064 gctcttcgccatccttctcgccttcctcctcgc 1096
>ref|XM_535710.2| PREDICTED: Canis familiaris similar to Absent in melanoma 1 protein (LOC478532), mRNA Length = 8808 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 6503 tcctcctcgtcttcctcctcg 6483
>gb|AC131039.7| Mus musculus chromosome 1, clone RP23-274I23, complete sequence Length = 187304 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 ttgctgtgagcaaattcttgc 516 ||||||||||||||||||||| Sbjct: 101849 ttgctgtgagcaaattcttgc 101829
>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete sequence Length = 166747 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1011 ttcttgaaacacaattttgttgaag 1035 |||||||||||| |||||||||||| Sbjct: 89878 ttcttgaaacactattttgttgaag 89902
>gb|AC163268.4| Mus musculus chromosome 1, clone RP24-63C6, complete sequence Length = 224994 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 ttgctgtgagcaaattcttgc 516 ||||||||||||||||||||| Sbjct: 215594 ttgctgtgagcaaattcttgc 215614
>gb|AY861166.1| Cottus gobio microsatellite Cott105 sequence Length = 711 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 273 tcctcctcgtcttcctcctcg 293
>dbj|AB227667.1| Aspergillus oryzae cDNA, contig sequence: AoEST4540 Length = 1046 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 gttgttgaggttggagggtta 626 ||||||||||||||||||||| Sbjct: 700 gttgttgaggttggagggtta 720
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ctcctcgtcttcctcctcgct 119 ||||||||||||||||||||| Sbjct: 1845041 ctcctcgtcttcctcctcgct 1845021
>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete sequence Length = 207863 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1011 ttcttgaaacacaattttgttgaag 1035 |||||||||||| |||||||||||| Sbjct: 172519 ttcttgaaacactattttgttgaag 172543
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 136088 tcctcctcgtcttcctcctcg 136068
>emb|CR955034.5| Wallaby DNA sequence from clone GRWB-130P10, complete sequence Length = 176287 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 aaaaatgctgggaaaattgta 305 ||||||||||||||||||||| Sbjct: 98206 aaaaatgctgggaaaattgta 98226
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 29226543 tcctcctcgtcttcctcctcg 29226563 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctcctc 116 |||||||||| |||||||||||||| Sbjct: 30129107 cgccatcctcatcgtcttcctcctc 30129083
>gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, complete sequence Length = 132832 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 cttcctcctcgctgcctcccccttc 131 ||||||||| ||||||||||||||| Sbjct: 19563 cttcctcctggctgcctcccccttc 19539
>emb|AL023800.1|HS833B2 Human DNA sequence from clone RP5-833B2 on chromosome Xq26.1-27.2 Contains part of the FGF13 gene for fibroblast growth factor 13, complete sequence Length = 73132 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 713 gctctcgaagaaaacaaagaa 733 ||||||||||||||||||||| Sbjct: 25203 gctctcgaagaaaacaaagaa 25223
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 97 tcctcctcgtcttcctcctcgctgcctcc 125 |||||||| ||||||||||||| |||||| Sbjct: 83562 tcctcctcctcttcctcctcgccgcctcc 83534
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 1/4 Length = 347558 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 822 aagaaaaacaaatagattcga 842 ||||||||||||||||||||| Sbjct: 207005 aagaaaaacaaatagattcga 206985
>emb|CR457461.7| Zebrafish DNA sequence from clone DKEY-23O10 in linkage group 14, complete sequence Length = 213600 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 814 acaaagccaagaaaaacaaat 834 ||||||||||||||||||||| Sbjct: 8441 acaaagccaagaaaaacaaat 8461
>ref|NM_001001262.1| Sus scrofa herpesvirus entry mediator C (HVEC), mRNA gb|AF308632.1|AF308632 Sus scrofa herpesvirus entry mediator C (HveC) mRNA, complete cds Length = 1548 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 89 ctccgccatcctcctcgtcttcctcctcg 117 ||||||| |||||||| |||||||||||| Sbjct: 1336 ctccgccctcctcctcctcttcctcctcg 1308
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctcctc 116 |||||||||| |||||||||||||| Sbjct: 108704 cgccatcctcatcgtcttcctcctc 108680
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgccatcctcctcgtcttcctcctc 116 |||||||||| |||||||||||||| Sbjct: 1811 cgccatcctcatcgtcttcctcctc 1787
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 23888 tcctcctcgtcttcctcctcg 23908
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 116511 tcctcctcgtcttcctcctcg 116531
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 791 ggagggtacagcatttgcaaaggacaaag 819 |||||| |||||||||||||||| ||||| Sbjct: 57318 ggagggaacagcatttgcaaaggccaaag 57290
>gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5O8 sequence, complete sequence Length = 99923 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1002 agatagtttttcttgaaacacaatt 1026 |||||||||||||||||| |||||| Sbjct: 58463 agatagtttttcttgaaagacaatt 58439
>emb|AL645600.11| Mouse DNA sequence from clone RP23-396N4 on chromosome 11, complete sequence Length = 180286 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcctcctcgtcttcctcctcg 117 ||||||||||||||||||||| Sbjct: 12720 tcctcctcgtcttcctcctcg 12740 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 210,740,010 Number of extensions: 11542546 Number of successful extensions: 275393 Number of sequences better than 10.0: 109 Number of HSP's gapped: 275381 Number of HSP's successfully gapped: 160 Length of query: 1082 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1059 Effective length of database: 18,503,978,556 Effective search space: 19595713290804 Effective search space used: 19595713290804 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)