>Q9Y2Z9:COQ6_HUMAN Ubiquinone biosynthesis monooxygenase COQ6 - Homo sapiens (Human)|
          Length = 468
 Score = 34.7 bits (78), Expect = 1.2
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
 Frame = +3

Query: 453 PYAEELLVWEPITGAQQHVPVPVAFSETGRTTAAVFCTIDGCDHCN------CHEGPFSV 614
           P++  L+ W   +GA       V  S  G   AA+ C +    H +         GP  V
Sbjct: 16  PHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHFHDKKILLLEAGPKKV 75

Query: 615 VLVFSVDNGDPDYEDVLTSACVYSSETGAWGELTVMQDRFYMHFMYYSSVLVGKSLLYF- 791
           +   S +        +   +    S  GAW  +  M+ R +     + +    ++L+ F 
Sbjct: 76  LEKLS-ETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQVWDAC--SEALIMFD 132

Query: 792 ---MTDGGLIVEYDMAMHGLT 845
              + D G IVE D+ MH LT
Sbjct: 133 KDNLDDMGYIVENDVIMHALT 153

>O14326:PUB3_SCHPO E3 ubiquitin-protein ligase pub3 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 786

 Score = 34.3 bits (77), Expect = 1.5
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = -1

Query: 1223 SGHRSVEADNRNQVTVSMIIAHPCHLLRLYLDHEEASSPGHDNGVCSLGKPQHMDWSC-C 1047
            + HRS    NR     S +     H++  + D      PG +    SLG+  ++D +   
Sbjct: 202  ASHRSSPVTNRQTNNTSALSNSNAHIMSSFEDQYGRLPPGWERRADSLGRTYYVDHNTRT 261

Query: 1046 TRWSTI*GQTSQVDDTAGYPSRISH 972
            T W+     T+ V +T+    R++H
Sbjct: 262  TTWTRPASSTNPVHNTSSDSQRLNH 286

>P39342:YJGR_ECOLI Uncharacterized protein yjgR - Escherichia coli|
          Length = 500

 Score = 32.7 bits (73), Expect = 4.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 554 GSGRAACLGERHRHRYMLLGTRDWLPHEEFLGIWALGEEEGAPVAA 417
           G  +A  + E+   R   +G  DW PH   + +W +  E+G PV A
Sbjct: 65  GVAQAGTVSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRA 110

>Q8NFH4:NUP37_HUMAN Nucleoporin Nup37 - Homo sapiens (Human)|
          Length = 326

 Score = 32.3 bits (72), Expect = 5.7
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = -1

Query: 1076 KPQHMDWSCCTRWSTI*GQTSQVDDTAGYPSRISHLP*P*LQMRIQFFNESQSTVLRQHE 897
            +P HMD +C  RWSTI   +  +  T GYP +++       Q +I      Q  ++    
Sbjct: 247  RPVHMDRACLFRWSTI---SENLFATTGYPGKMAS------QFQIHHLGHPQPILMGSVA 297

Query: 896  VATG 885
            V +G
Sbjct: 298  VGSG 301

>O77245:E75_METEN Nuclear hormone receptor E75 - Metapenaeus ensis (Greasyback|
           shrimp) (Sand shrimp)
          Length = 606

 Score = 32.3 bits (72), Expect = 5.7
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = +1

Query: 475 CGSQSRVPSSMYRCLWRSPRQAARPLPCSAQ*MGVTTATAMRAPSAWSWSSRLTMEILTT 654
           C    R PSS   C WR P     P+  S + +G  + T    P   SWS R  + + +T
Sbjct: 530 CARLQRRPSSTRICSWRKP--TTSPIKSSVRNVGKRSLTPHSPPPPRSWSRR-CLSLHST 586

Query: 655 RMFSRQH 675
           R    +H
Sbjct: 587 RALWLRH 593

>Q7Z591:AKNA_HUMAN AT-hook-containing transcription factor - Homo sapiens (Human)|
          Length = 1439

 Score = 32.0 bits (71), Expect = 7.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -3

Query: 600 PHGSCSGHTHLLCRTRQRSCGLSRRTPQAPVHAAGHP*LAPT 475
           P G+ S  +H    T     G+S R PQ P+H  G P L  T
Sbjct: 874 PPGTKSAASHQSSMTSLEGSGISERLPQKPLHRGGGPHLEET 915

>O60105:PUR8_SCHPO Adenylosuccinate lyase - Schizosaccharomyces pombe (Fission yeast)|
          Length = 482

 Score = 31.6 bits (70), Expect = 9.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +1

Query: 814 WSMTWQCMD*LGSTHQTPATLRKYPVATSCWRRTVDWDSLKNWIRICN 957
           WS+ ++ +  LG TH  PA L       + W + + WD L+N++R  N
Sbjct: 142 WSLRYKDIPTLGFTHYQPAQLTTVGKRATLWIQELLWD-LRNFVRARN 188

>Q8VDR9:DOCK6_MOUSE Dedicator of cytokinesis protein 6 - Mus musculus (Mouse)|
          Length = 2080

 Score = 31.6 bits (70), Expect = 9.7
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -2

Query: 706  PQAPVSDE*THADVRTSS*SGSPLSTEKTKTTLKGPSWQLQWSHPSIVQNTAA 548
            P AP S         T++ SG PLS E ++T L    W L+ + P+++Q  AA
Sbjct: 1255 PLAPGSRTSISQGPSTAARSGCPLSAESSRTLLVCVLWVLKNAEPTLLQRWAA 1307


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 279,363,160
Number of extensions: 6240810
Number of successful extensions: 17918
Number of sequences better than 10.0: 8
Number of HSP's gapped: 17913
Number of HSP's successfully gapped: 8
Length of query: 528
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 410
Effective length of database: 68,319,629
Effective search space: 28011047890
Effective search space used: 28011047890
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)