ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf16i17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066339:Os05g0103400 | 100 | 9e-22 | 2 | AK063862:Os04g0387600 | 73 | 1e-13 | 3 | AK121771:Os02g0508100 | 72 | 2e-13 | 4 | AK063931:Os02g0508100 | 72 | 2e-13 | 5 | AK060288:Os01g0923200 | 70 | 1e-12 | 6 | AK062973:Os11g0496500 | 69 | 2e-12 | 7 | AK071540:Os05g0103300 | 62 | 2e-10 | 8 | AK062996:Os05g0103300 | 62 | 2e-10 | 9 | AK105187:Os02g0509500 | 55 | 3e-08 | 10 | AK111020:Os01g0849500 | 54 | 1e-07 | 11 | AK063212:Os04g0387900 | 53 | 2e-07 | 12 | AK069371:Os02g0166600 | 29 | 2.0 | 13 | AK066468:Os01g0212400 | 28 | 4.5 | 14 | AK119447:Os01g0533400 | 27 | 9.8 |
|---|
>AK066339:Os05g0103400 | Length = 69 Score = 100 bits (248), Expect = 9e-22 Identities = 48/69 (69%), Positives = 53/69 (76%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 MSDWGPVVIA PG+HHFVEFGN+HTSAM+I+VH+IIYFALI LFVI Sbjct: 1 MSDWGPVVIAVVLFVLLSPGLLIQLPGRHHFVEFGNLHTSAMSIVVHSIIYFALITLFVI 60 Query: 334 VIGVHITTD 360 VIGVHITTD Sbjct: 61 VIGVHITTD 69
>AK063862:Os04g0387600 | Length = 69 Score = 73.2 bits (178), Expect = 1e-13 Identities = 32/66 (48%), Positives = 43/66 (65%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPVV+A PG+ EFG+ HTS +AI+VHA++YFAL+ +F+I Sbjct: 1 MADWGPVVVATVLFVLLTPGLLCTVPGRGRVAEFGSFHTSGLAIIVHAVLYFALLTIFLI 60 Query: 334 VIGVHI 351 IGVHI Sbjct: 61 AIGVHI 66
>AK121771:Os02g0508100 | Length = 69 Score = 72.4 bits (176), Expect = 2e-13 Identities = 35/66 (53%), Positives = 41/66 (62%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPVVIA P V FG MHTS +A+LVHA+IYFALI +F+I Sbjct: 1 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 60 Query: 334 VIGVHI 351 IGVHI Sbjct: 61 AIGVHI 66
>AK063931:Os02g0508100 | Length = 69 Score = 72.4 bits (176), Expect = 2e-13 Identities = 35/66 (53%), Positives = 41/66 (62%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPVVIA P V FG MHTS +A+LVHA+IYFALI +F+I Sbjct: 1 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 60 Query: 334 VIGVHI 351 IGVHI Sbjct: 61 AIGVHI 66
>AK060288:Os01g0923200 | Length = 75 Score = 69.7 bits (169), Expect = 1e-12 Identities = 30/65 (46%), Positives = 42/65 (64%) Frame = +1 Query: 157 SDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIV 336 +DWGP+++A P + VEFGNM TSA+AILVHA+I+F L+ +FV+ Sbjct: 8 TDWGPIIVAVILFVVLSPGLLFQLPARARVVEFGNMATSAIAILVHAVIFFCLLTIFVVA 67 Query: 337 IGVHI 351 IGVH+ Sbjct: 68 IGVHV 72
>AK062973:Os11g0496500 | Length = 69 Score = 69.3 bits (168), Expect = 2e-12 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPV I PGK VEFGN TS ++ILVH+IIYFALIA+F++ Sbjct: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSIIYFALIAIFLL 60 Query: 334 VIGVHI 351 + VH+ Sbjct: 61 AVNVHM 66
>AK071540:Os05g0103300 | Length = 72 Score = 62.4 bits (150), Expect = 2e-10 Identities = 29/66 (43%), Positives = 39/66 (59%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M DWGPV+I+ PGK +EFG TS ++ILVH I++FAL A+F++ Sbjct: 1 MQDWGPVLISWVLFILLSPGLLFQIPGKCRLIEFGKFQTSVVSILVHTILFFALDAIFLV 60 Query: 334 VIGVHI 351 IGV I Sbjct: 61 AIGVQI 66
>AK062996:Os05g0103300 | Length = 72 Score = 62.4 bits (150), Expect = 2e-10 Identities = 29/66 (43%), Positives = 39/66 (59%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M DWGPV+I+ PGK +EFG TS ++ILVH I++FAL A+F++ Sbjct: 1 MQDWGPVLISWVLFILLSPGLLFQIPGKCRLIEFGKFQTSVVSILVHTILFFALDAIFLV 60 Query: 334 VIGVHI 351 IGV I Sbjct: 61 AIGVQI 66
>AK105187:Os02g0509500 | Length = 69 Score = 55.1 bits (131), Expect = 3e-08 Identities = 24/68 (35%), Positives = 35/68 (51%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DW PVV+ PG H V+FG+ T+ AI VH +I+FA A+ + Sbjct: 1 MADWAPVVVGVVLFVLLSPGLLVELPGTHRHVDFGSFRTNGKAIFVHTLIFFAAFAILTL 60 Query: 334 VIGVHITT 357 + +HI T Sbjct: 61 ALHLHIYT 68
>AK111020:Os01g0849500 | Length = 68 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M DW P +IA PG++ V+F NM TS +I+VHA+IY L+ LF++ Sbjct: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60 Query: 334 VIGVHI 351 ++ H+ Sbjct: 61 ILEAHL 66
>AK063212:Os04g0387900 | Length = 70 Score = 52.8 bits (125), Expect = 2e-07 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M DW PVV+ PG H +V+FG++ + + +VH I++F L A+ V+ Sbjct: 1 MQDWAPVVVGVVLFVVLSPGLLIELPGTHRWVDFGSLRVTGKSAVVHTIVFFVLFAIVVV 60 Query: 334 VIGVHITT 357 +HI T Sbjct: 61 ACKLHIYT 68
>AK069371:Os02g0166600 | Length = 136 Score = 29.3 bits (64), Expect = 2.0 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -1 Query: 583 FFFFGKPSKHLFINQAATYERLITQGNKETSSHTTVVAAPAR 458 FFFFG+ K L ++Q+A+ R + + + + H + + R Sbjct: 87 FFFFGRRGKQLVVSQSASSIRRLARSRRSRAPHAGLNGSKGR 128
>AK066468:Os01g0212400 | Length = 584 Score = 28.1 bits (61), Expect = 4.5 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -1 Query: 553 LFINQAATYERLITQGNKETSSHTTVVAAPARTEARVS 440 LF+ AA Y RLI+ G+ ++S T++++ P R++ Sbjct: 15 LFLLAAAAYGRLISDGSPASASATSLLSNPVSAVIRLT 52
>AK119447:Os01g0533400 | Length = 827 Score = 26.9 bits (58), Expect = 9.8 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%) Frame = -3 Query: 449 KSQPKTKVKKE--AEEEGEQLNWSW 381 K+Q VKK AE+E E L WSW Sbjct: 424 KTQTSVMVKKPNTAEQEQESLKWSW 448 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 8,014,694 Number of extensions: 119753 Number of successful extensions: 320 Number of sequences better than 10.0: 14 Number of HSP's gapped: 320 Number of HSP's successfully gapped: 14 Length of query: 195 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 100 Effective length of database: 11,595,960 Effective search space: 1159596000 Effective search space used: 1159596000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
