| Clone Name | FLbaf16i17 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g01290:12005.t00033:unspliced-genomic expressed protein| Length = 984 Score = 119 bits (254), Expect = 2e-26 Identities = 50/71 (70%), Positives = 55/71 (77%) Frame = +1 / +3 Query: 151 RMSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFV 330 RMSDWGPVVIA PG+HHFVEFGN+HTSAM+I+VH+IIYFALI LFV Sbjct: 384 RMSDWGPVVIAVVLFVLLSPGLLIQLPGRHHFVEFGNLHTSAMSIVVHSIIYFALITLFV 563 Query: 331 IVIGVHITTD* 363 IVIGVHITTD* Sbjct: 564 IVIGVHITTD* 596 Score = 57.4 bits (119), Expect = 8e-08 Identities = 25/41 (60%), Positives = 25/41 (60%) Frame = -3 / -3 Query: 272 LVCMLPNSTKWCFPGXXXXXXXXXXXXXXTAITTGPQSDIL 150 LVC LPNSTKWC PG TAITTGPQSDIL Sbjct: 505 LVCRLPNSTKWCLPGSWMSSPGESSTNSTTAITTGPQSDIL 383
>LOC_Os04g31820:12004.t02863:unspliced-genomic expressed protein| Length = 702 Score = 84.5 bits (178), Expect = 6e-16 Identities = 32/66 (48%), Positives = 43/66 (65%) Frame = +1 / +3 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPVV+A PG+ EFG+ HTS +AI+VHA++YFAL+ +F+I Sbjct: 99 MADWGPVVVATVLFVLLTPGLLCTVPGRGRVAEFGSFHTSGLAIIVHAVLYFALLTIFLI 278 Query: 334 VIGVHI 351 IGVHI Sbjct: 279 AIGVHI 296
>LOC_Os02g30470:12002.t02740:unspliced-genomic expressed protein| Length = 816 Score = 83.5 bits (176), Expect = 1e-15 Identities = 35/66 (53%), Positives = 41/66 (62%) Frame = +1 / +2 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPVVIA P V FG MHTS +A+LVHA+IYFALI +F+I Sbjct: 116 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 295 Query: 334 VIGVHI 351 IGVHI Sbjct: 296 AIGVHI 313
>LOC_Os01g69890:12001.t06291:unspliced-genomic expressed protein| Length = 566 Score = 80.3 bits (169), Expect = 1e-14 Identities = 30/65 (46%), Positives = 42/65 (64%) Frame = +1 / +1 Query: 157 SDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIV 336 +DWGP+++A P + VEFGNM TSA+AILVHA+I+F L+ +FV+ Sbjct: 142 TDWGPIIVAVILFVVLSPGLLFQLPARARVVEFGNMATSAIAILVHAVIFFCLLTIFVVA 321 Query: 337 IGVHI 351 IGVH+ Sbjct: 322 IGVHV 336
>LOC_Os11g30360:12011.t02640:unspliced-genomic expressed protein| Length = 562 Score = 79.9 bits (168), Expect = 1e-14 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = +1 / +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DWGPV I PGK VEFGN TS ++ILVH+IIYFALIA+F++ Sbjct: 103 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSIIYFALIAIFLL 282 Query: 334 VIGVHI 351 + VH+ Sbjct: 283 AVNVHM 300
>LOC_Os05g01280:12005.t00032:unspliced-genomic expressed protein| Length = 1488 Score = 72.5 bits (152), Expect = 2e-12 Identities = 29/67 (43%), Positives = 40/67 (59%) Frame = +1 / +2 Query: 151 RMSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFV 330 +M DWGPV+I+ PGK +EFG TS ++ILVH I++FAL A+F+ Sbjct: 245 KMQDWGPVLISWVLFILLSPGLLFQIPGKCRLIEFGKFQTSVVSILVHTILFFALDAIFL 424 Query: 331 IVIGVHI 351 + IGV I Sbjct: 425 VAIGVQI 445
>LOC_Os07g20290:12007.t01834:unspliced-genomic expressed protein| Length = 542 Score = 70.3 bits (147), Expect = 1e-11 Identities = 26/65 (40%), Positives = 38/65 (58%) Frame = +1 / +3 Query: 157 SDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIV 336 +DWGP++ A P + VE GNM TS ++ILVHAI+YF ++ + V+ Sbjct: 87 TDWGPIIAAVVLFILLSPGFLFQLPARARVVELGNMGTSGLSILVHAILYFCILTIVVVA 266 Query: 337 IGVHI 351 IGVH+ Sbjct: 267 IGVHV 281
>LOC_Os02g30550:12002.t02748:unspliced-genomic conserved hypothetical protein| Length = 213 Score = 70.3 bits (147), Expect = 1e-11 Identities = 26/64 (40%), Positives = 37/64 (57%) Frame = +1 / +1 Query: 160 DWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIVI 339 DWGPVV+A P + VEFGNM TS +++LVHA+ +F L + V+ I Sbjct: 10 DWGPVVVAVILFILLSPGLLFQVPARTRVVEFGNMCTSGVSVLVHAVFFFVLFTVLVVAI 189 Query: 340 GVHI 351 G+H+ Sbjct: 190 GIHV 201
>LOC_Os02g30600:12002.t02753:unspliced-genomic conserved hypothetical protein| Length = 501 Score = 64.8 bits (135), Expect = 5e-10 Identities = 26/71 (36%), Positives = 37/71 (52%) Frame = +1 / +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M+DW PVV+ PG H V+FG+ T+ AI VH +I+FA A+ + Sbjct: 43 MADWAPVVVGVVLFVLLSPGLLVELPGTHRHVDFGSFRTNGKAIFVHTLIFFAAFAILTL 222 Query: 334 VIGVHITTD*S 366 + +HI T *S Sbjct: 223 ALHLHIYTG*S 255
>LOC_Os01g63000:12001.t05671:unspliced-genomic expressed protein| Length = 207 Score = 61.1 bits (127), Expect = 6e-09 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +1 / +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M DW P +IA PG++ V+F NM TS +I+VHA+IY L+ LF++ Sbjct: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 180 Query: 334 VIGVHI 351 ++ H+ Sbjct: 181 ILEAHL 198
>LOC_Os04g31870:12004.t02867:unspliced-genomic expressed protein| Length = 763 Score = 60.2 bits (125), Expect = 1e-08 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = +1 / +1 Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333 M DW PVV+ PG H +V+FG++ + + +VH I++F L A+ V+ Sbjct: 214 MQDWAPVVVGVVLFVVLSPGLLIELPGTHRWVDFGSLRVTGKSAVVHTIVFFVLFAIVVV 393 Query: 334 VIGVHITT 357 +HI T Sbjct: 394 ACKLHIYT 417
>LOC_Os01g01180:12001.t00018:unspliced-genomic expressed protein| Length = 219 Score = 46.9 bits (96), Expect(2) = 2e-06 Identities = 15/34 (44%), Positives = 26/34 (76%) Frame = +1 / +1 Query: 250 EFGNMHTSAMAILVHAIIYFALIALFVIVIGVHI 351 EF +M TS +I VHA+++FA A+F++ +G+H+ Sbjct: 106 EFHSMRTSVASIFVHALLFFAFCAIFMVAVGLHL 207 Score = 22.6 bits (43), Expect(2) = 2e-06 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +1 / +1 Query: 160 DWGPVVIA 183 DWGPV+IA Sbjct: 13 DWGPVLIA 36
>LOC_Os03g43650:12003.t03757:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor,| putative, expressed Length = 1970 Score = 34.1 bits (68), Expect = 0.86 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -3 / -3 Query: 461 KNRGKSQPKTKVKKEAEEEGEQLNWSW 381 + RG+ +T +KEAEEEGE+L SW Sbjct: 204 RRRGERLGETWKEKEAEEEGEKLESSW 124
>LOC_Os02g55430:12002.t05119:unspliced-genomic alginate regulatory protein AlgP, putative, expressed| Length = 1772 Score = 29.9 bits (59), Expect(2) = 2.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -3 / -2 Query: 497 NIITYYSGCCTSKNRGKSQPK 435 N+ YY CCT+++ SQPK Sbjct: 1264 NLYYYYHYCCTNRSATPSQPK 1202 Score = 22.6 bits (43), Expect(2) = 2.9 Identities = 7/21 (33%), Positives = 12/21 (57%) Frame = -3 / -3 Query: 437 KTKVKKEAEEEGEQLNWSWPG 375 + K+K EG++ +W W G Sbjct: 114 REKIKT*P*REGKRRDWDWKG 52
>LOC_Os02g07010:12002.t00598:unspliced-genomic expressed protein| Length = 1457 Score = 32.2 bits (64), Expect = 3.1 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -1 / +3 Query: 583 FFFFGKPSKHLFINQAATYERLITQGNKETSSHTTVVAAPAR 458 FFFFG+ K L ++Q+A+ R + + + + H + + R Sbjct: 570 FFFFGRRGKQLVVSQSASSIRRLARSRRSRAPHAGLNGSKGR 695
>LOC_Os04g35114:12004.t03183:unspliced-genomic receptor protein kinase CRINKLY4 precursor, putative, expressed| Length = 3813 Score = 30.9 bits (61), Expect = 8.0 Identities = 9/26 (34%), Positives = 19/26 (73%) Frame = +1 / +2 Query: 253 FGNMHTSAMAILVHAIIYFALIALFV 330 F +HT ++A+ VHA++ +A+I + + Sbjct: 599 FEKLHTCSIAVHVHALLIYAIIGILI 676 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 113,131,439 Number of extensions: 1146048 Number of successful extensions: 4077 Number of sequences better than 10.0: 16 Length of query: 195 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 147 Effective length of database: 52,912,542 Effective search space: 7778143674 Effective search space used: 7778143674 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)