ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf16i17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g01290:12005.t00033:unspliced-genomic expressed protein 119 2e-26
2LOC_Os04g31820:12004.t02863:unspliced-genomic expressed protein 84 6e-16
3LOC_Os02g30470:12002.t02740:unspliced-genomic expressed protein 84 1e-15
4LOC_Os01g69890:12001.t06291:unspliced-genomic expressed protein 80 1e-14
5LOC_Os11g30360:12011.t02640:unspliced-genomic expressed protein 80 1e-14
6LOC_Os05g01280:12005.t00032:unspliced-genomic expressed protein 73 2e-12
7LOC_Os07g20290:12007.t01834:unspliced-genomic expressed protein 70 1e-11
8LOC_Os02g30550:12002.t02748:unspliced-genomic conserved hypo... 70 1e-11
9LOC_Os02g30600:12002.t02753:unspliced-genomic conserved hypo... 65 5e-10
10LOC_Os01g63000:12001.t05671:unspliced-genomic expressed protein 61 6e-09
11LOC_Os04g31870:12004.t02867:unspliced-genomic expressed protein 60 1e-08
12LOC_Os01g01180:12001.t00018:unspliced-genomic expressed protein 47 2e-06
13LOC_Os03g43650:12003.t03757:unspliced-genomic leucine-rich r... 34 0.86
14LOC_Os02g55430:12002.t05119:unspliced-genomic alginate regul... 30 2.9
15LOC_Os02g07010:12002.t00598:unspliced-genomic expressed protein 32 3.1
16LOC_Os04g35114:12004.t03183:unspliced-genomic receptor prote... 31 8.0

>LOC_Os05g01290:12005.t00033:unspliced-genomic expressed protein|
          Length = 984
 Score =  119 bits (254), Expect = 2e-26
 Identities = 50/71 (70%), Positives = 55/71 (77%)
 Frame = +1 / +3

                                                                       
Query: 151 RMSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFV 330
           RMSDWGPVVIA               PG+HHFVEFGN+HTSAM+I+VH+IIYFALI LFV
Sbjct: 384 RMSDWGPVVIAVVLFVLLSPGLLIQLPGRHHFVEFGNLHTSAMSIVVHSIIYFALITLFV 563

                      
Query: 331 IVIGVHITTD* 363
           IVIGVHITTD*
Sbjct: 564 IVIGVHITTD* 596



 Score = 57.4 bits (119), Expect = 8e-08
 Identities = 25/41 (60%), Positives = 25/41 (60%)
 Frame = -3 / -3

                                                    
Query: 272 LVCMLPNSTKWCFPGXXXXXXXXXXXXXXTAITTGPQSDIL 150
           LVC LPNSTKWC PG              TAITTGPQSDIL
Sbjct: 505 LVCRLPNSTKWCLPGSWMSSPGESSTNSTTAITTGPQSDIL 383



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>LOC_Os04g31820:12004.t02863:unspliced-genomic expressed protein|
          Length = 702

 Score = 84.5 bits (178), Expect = 6e-16
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = +1 / +3

                                                                       
Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333
           M+DWGPVV+A               PG+    EFG+ HTS +AI+VHA++YFAL+ +F+I
Sbjct: 99  MADWGPVVVATVLFVLLTPGLLCTVPGRGRVAEFGSFHTSGLAIIVHAVLYFALLTIFLI 278

                 
Query: 334 VIGVHI 351
            IGVHI
Sbjct: 279 AIGVHI 296



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>LOC_Os02g30470:12002.t02740:unspliced-genomic expressed protein|
          Length = 816

 Score = 83.5 bits (176), Expect = 1e-15
 Identities = 35/66 (53%), Positives = 41/66 (62%)
 Frame = +1 / +2

                                                                       
Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333
           M+DWGPVVIA               P     V FG MHTS +A+LVHA+IYFALI +F+I
Sbjct: 116 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 295

                 
Query: 334 VIGVHI 351
            IGVHI
Sbjct: 296 AIGVHI 313



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>LOC_Os01g69890:12001.t06291:unspliced-genomic expressed protein|
          Length = 566

 Score = 80.3 bits (169), Expect = 1e-14
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = +1 / +1

                                                                       
Query: 157 SDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIV 336
           +DWGP+++A               P +   VEFGNM TSA+AILVHA+I+F L+ +FV+ 
Sbjct: 142 TDWGPIIVAVILFVVLSPGLLFQLPARARVVEFGNMATSAIAILVHAVIFFCLLTIFVVA 321

                
Query: 337 IGVHI 351
           IGVH+
Sbjct: 322 IGVHV 336



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>LOC_Os11g30360:12011.t02640:unspliced-genomic expressed protein|
          Length = 562

 Score = 79.9 bits (168), Expect = 1e-14
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +1 / +1

                                                                       
Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333
           M+DWGPV I                PGK   VEFGN  TS ++ILVH+IIYFALIA+F++
Sbjct: 103 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSIIYFALIAIFLL 282

                 
Query: 334 VIGVHI 351
            + VH+
Sbjct: 283 AVNVHM 300



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>LOC_Os05g01280:12005.t00032:unspliced-genomic expressed protein|
          Length = 1488

 Score = 72.5 bits (152), Expect = 2e-12
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = +1 / +2

                                                                       
Query: 151 RMSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFV 330
           +M DWGPV+I+               PGK   +EFG   TS ++ILVH I++FAL A+F+
Sbjct: 245 KMQDWGPVLISWVLFILLSPGLLFQIPGKCRLIEFGKFQTSVVSILVHTILFFALDAIFL 424

                  
Query: 331 IVIGVHI 351
           + IGV I
Sbjct: 425 VAIGVQI 445



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>LOC_Os07g20290:12007.t01834:unspliced-genomic expressed protein|
          Length = 542

 Score = 70.3 bits (147), Expect = 1e-11
 Identities = 26/65 (40%), Positives = 38/65 (58%)
 Frame = +1 / +3

                                                                       
Query: 157 SDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIV 336
           +DWGP++ A               P +   VE GNM TS ++ILVHAI+YF ++ + V+ 
Sbjct: 87  TDWGPIIAAVVLFILLSPGFLFQLPARARVVELGNMGTSGLSILVHAILYFCILTIVVVA 266

                
Query: 337 IGVHI 351
           IGVH+
Sbjct: 267 IGVHV 281



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>LOC_Os02g30550:12002.t02748:unspliced-genomic conserved hypothetical protein|
          Length = 213

 Score = 70.3 bits (147), Expect = 1e-11
 Identities = 26/64 (40%), Positives = 37/64 (57%)
 Frame = +1 / +1

                                                                       
Query: 160 DWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVIVI 339
           DWGPVV+A               P +   VEFGNM TS +++LVHA+ +F L  + V+ I
Sbjct: 10  DWGPVVVAVILFILLSPGLLFQVPARTRVVEFGNMCTSGVSVLVHAVFFFVLFTVLVVAI 189

               
Query: 340 GVHI 351
           G+H+
Sbjct: 190 GIHV 201



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>LOC_Os02g30600:12002.t02753:unspliced-genomic conserved hypothetical protein|
          Length = 501

 Score = 64.8 bits (135), Expect = 5e-10
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = +1 / +1

                                                                       
Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333
           M+DW PVV+                PG H  V+FG+  T+  AI VH +I+FA  A+  +
Sbjct: 43  MADWAPVVVGVVLFVLLSPGLLVELPGTHRHVDFGSFRTNGKAIFVHTLIFFAAFAILTL 222

                      
Query: 334 VIGVHITTD*S 366
            + +HI T *S
Sbjct: 223 ALHLHIYTG*S 255



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>LOC_Os01g63000:12001.t05671:unspliced-genomic expressed protein|
          Length = 207

 Score = 61.1 bits (127), Expect = 6e-09
 Identities = 24/66 (36%), Positives = 37/66 (56%)
 Frame = +1 / +1

                                                                       
Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333
           M DW P +IA               PG++  V+F NM TS  +I+VHA+IY  L+ LF++
Sbjct: 1   MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 180

                 
Query: 334 VIGVHI 351
           ++  H+
Sbjct: 181 ILEAHL 198



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>LOC_Os04g31870:12004.t02867:unspliced-genomic expressed protein|
          Length = 763

 Score = 60.2 bits (125), Expect = 1e-08
 Identities = 22/68 (32%), Positives = 35/68 (51%)
 Frame = +1 / +1

                                                                       
Query: 154 MSDWGPVVIAXXXXXXXXXXXXXXXPGKHHFVEFGNMHTSAMAILVHAIIYFALIALFVI 333
           M DW PVV+                PG H +V+FG++  +  + +VH I++F L A+ V+
Sbjct: 214 MQDWAPVVVGVVLFVVLSPGLLIELPGTHRWVDFGSLRVTGKSAVVHTIVFFVLFAIVVV 393

                   
Query: 334 VIGVHITT 357
              +HI T
Sbjct: 394 ACKLHIYT 417



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>LOC_Os01g01180:12001.t00018:unspliced-genomic expressed protein|
          Length = 219

 Score = 46.9 bits (96), Expect(2) = 2e-06
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = +1 / +1

                                             
Query: 250 EFGNMHTSAMAILVHAIIYFALIALFVIVIGVHI 351
           EF +M TS  +I VHA+++FA  A+F++ +G+H+
Sbjct: 106 EFHSMRTSVASIFVHALLFFAFCAIFMVAVGLHL 207



 Score = 22.6 bits (43), Expect(2) = 2e-06
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1 / +1

                   
Query: 160 DWGPVVIA 183
           DWGPV+IA
Sbjct: 13  DWGPVLIA 36



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>LOC_Os03g43650:12003.t03757:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor,|
           putative, expressed
          Length = 1970

 Score = 34.1 bits (68), Expect = 0.86
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3 / -3

                                      
Query: 461 KNRGKSQPKTKVKKEAEEEGEQLNWSW 381
           + RG+   +T  +KEAEEEGE+L  SW
Sbjct: 204 RRRGERLGETWKEKEAEEEGEKLESSW 124



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>LOC_Os02g55430:12002.t05119:unspliced-genomic alginate regulatory protein AlgP, putative, expressed|
          Length = 1772

 Score = 29.9 bits (59), Expect(2) = 2.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3 / -2

                                 
Query: 497  NIITYYSGCCTSKNRGKSQPK 435
            N+  YY  CCT+++   SQPK
Sbjct: 1264 NLYYYYHYCCTNRSATPSQPK 1202



 Score = 22.6 bits (43), Expect(2) = 2.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3 / -3

                                
Query: 437 KTKVKKEAEEEGEQLNWSWPG 375
           + K+K     EG++ +W W G
Sbjct: 114 REKIKT*P*REGKRRDWDWKG 52



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>LOC_Os02g07010:12002.t00598:unspliced-genomic expressed protein|
          Length = 1457

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1 / +3

                                                     
Query: 583 FFFFGKPSKHLFINQAATYERLITQGNKETSSHTTVVAAPAR 458
           FFFFG+  K L ++Q+A+  R + +  +  + H  +  +  R
Sbjct: 570 FFFFGRRGKQLVVSQSASSIRRLARSRRSRAPHAGLNGSKGR 695



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>LOC_Os04g35114:12004.t03183:unspliced-genomic receptor protein kinase CRINKLY4 precursor, putative, expressed|
          Length = 3813

 Score = 30.9 bits (61), Expect = 8.0
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +1 / +2

                                     
Query: 253 FGNMHTSAMAILVHAIIYFALIALFV 330
           F  +HT ++A+ VHA++ +A+I + +
Sbjct: 599 FEKLHTCSIAVHVHALLIYAIIGILI 676


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 113,131,439
Number of extensions: 1146048
Number of successful extensions: 4077
Number of sequences better than 10.0: 16
Length of query: 195
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 147
Effective length of database: 52,912,542
Effective search space: 7778143674
Effective search space used: 7778143674
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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