>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1344
Score = 279 bits (603), Expect(2) = e-101
Identities = 105/125 (84%), Positives = 118/125 (94%)
Frame = +3 / +3
Query: 318 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 497
QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYY
Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 647
Query: 498 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 677
DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPG
Sbjct: 648 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 827
Query: 678 CEESG 692
CEESG
Sbjct: 828 CEESG 842
Score = 109 bits (233), Expect(2) = e-101
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1 / +3
Query: 49 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 201
AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSN A LGSVSNGGRI CMQV
Sbjct: 204 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQV 356
Score = 197 bits (424), Expect(2) = 5e-66
Identities = 88/129 (68%), Positives = 96/129 (74%)
Frame = -3 / -3
Query: 691 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIV 512
PDSSQPGGL AMKL +CT LS PMMRT ASGY T VASVHPNIGSFH+V
Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662
Query: 511 QYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLMPS 332
QY PS*YPGD SR NPTLLNSRQGTHL+R R S C +R+S +SGG+ DRVSNFLMPS
Sbjct: 661 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSNFLMPS 482
Query: 331 MGHTCKSDS 305
+GHTC S
Sbjct: 481 IGHTCAEKS 455
Score = 75.3 bits (158), Expect(2) = 5e-66
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -2 / -3
Query: 209 MLFTCMHXXXXXXXXXXXXXPFERRLTGRPAVDLSPWKGATEVADEAITVGAIA 48
++ TC+ ERRLTG PAVDLSPWKGATEVADEAITVGAIA
Sbjct: 364 LVHTCIQLILPPLLTLPRPALLERRLTGSPAVDLSPWKGATEVADEAITVGAIA 203
Score = 102 bits (217), Expect(3) = 4e-55
Identities = 49/79 (62%), Positives = 56/79 (70%)
Frame = +2 / +2
Query: 317 AGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISWVL 496
AGVA HQEV DPV+ AT GP A R+P P+Q+GALPRV G V LP* ++SWVL
Sbjct: 467 AGVAD*RHQEV*DPVVPATAHGRGPLEADRVPAPVQMGALPRV**GRVRLP*EPQVSWVL 646
Query: 497 RWPVLDNVEAAYVRMHRRH 553
W VLD+VEAAYVRMH H
Sbjct: 647 *WQVLDHVEAAYVRMH*CH 703
Score = 100 bits (214), Expect(3) = 4e-55
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3 / +2
Query: 48 SYGPHRDGLVGHLRRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAG 200
S G HRDGLVGHLR S PGAQ+HRR PRQPPL++ PRQRQQRWKDQ++AG
Sbjct: 203 SNGAHRDGLVGHLRCSLPGAQIHRRAPRQPPLQQRRPRQRQQRWKDQLYAG 355
Score = 51.0 bits (105), Expect(3) = 4e-55
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +2 / +2
Query: 602 VCPHHRIRQHASGAVRQLHRLQATRLRGVRQGIN 703
+C HHR+RQ +GAV LHRLQA LRGVR+ ++
Sbjct: 752 ICSHHRLRQRQAGAVD*LHRLQAPGLRGVRRKLS 853
Score = 135 bits (290), Expect(3) = 2e-43
Identities = 56/79 (70%), Positives = 66/79 (83%)
Frame = -2 / -2
Query: 551 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 372
G+ ASEHRQLPH PVPAI+VPRR VVLT DEP+L +LEARHP G +QV+DLL+E L E
Sbjct: 701 GISASEHRQLPHGPVPAIIVPRRPVVLTVDEPDLTKLEARHPFGPEQVLDLLQEVLDRER 522
Query: 371 WQVRQGLELLDALDGPHLQ 315
WQVRQGL+LLDA + PHL+
Sbjct: 521 WQVRQGLKLLDAFNRPHLR 465
Score = 52.4 bits (108), Expect(3) = 2e-43
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / -1
Query: 115 WT*APGKERRRWPTRPSRWGP 53
W *APG+E+RRWPTRPSRW P
Sbjct: 270 WI*APGREQRRWPTRPSRWAP 208
Score = 33.1 bits (66), Expect(3) = 2e-43
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 690 RTPRSLVA*RR*S*RTAPDACCRIR*C 610
RTPR+ A RR*S* TAP CR R*C
Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR*C 760
Score = 72.1 bits (151), Expect(4) = 3e-28
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -1
Query: 552 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPTW 421
W +CIRT*AAST SST H STQE +HGR T+P *TRGKAP W
Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRRTRPY*TRGKAPIW 571
Score = 42.8 bits (87), Expect(4) = 3e-28
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -1 / -2
Query: 201 YLHAPDPSTVADAAEASTVRXXXXXXXXXGLEPLERSD 88
YLH DPSTVADAAEA V G EPLE S+
Sbjct: 356 YLHTADPSTVADAAEAGAVGAAADGEPGGGFEPLEGSN 243
Score = 33.1 bits (66), Expect(4) = 3e-28
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / -2
Query: 662 GDEADALHLTHVVESDDAD 606
GDEA+ LHL VVE+DDA+
Sbjct: 812 GDEANQLHLPDVVEADDAN 756
Score = 32.7 bits (65), Expect(4) = 3e-28
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / -1
Query: 378 *VVASKTGSRTS*CPRWATPANQIHV 301
* VA TGS+TS*C + ATPA + H+
Sbjct: 528 *AVAGTTGSQTS*CLQSATPAQRNHM 451
Score = 52.8 bits (109), Expect(2) = 1e-11
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 475 TTHLLGTTMAGTGQCGSCLCSDAPTP 552
TT LLGT MAGTG CGSCLCSDA P
Sbjct: 625 TTGLLGTMMAGTGPCGSCLCSDALMP 702
Score = 36.8 bits (74), Expect(2) = 1e-11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 319 RCGPSRASRSSRPCLTCH 372
RCG +ASRS RPC TCH
Sbjct: 469 RCGRLKASRSLRPCRTCH 522
>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1193
Score = 280 bits (605), Expect(2) = e-100
Identities = 105/126 (83%), Positives = 119/126 (94%)
Frame = +3 / +2
Query: 315 LQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGY 494
+QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGY
Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 523
Query: 495 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPP 674
YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPP
Sbjct: 524 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 703
Query: 675 GCEESG 692
GCEESG
Sbjct: 704 GCEESG 721
Score = 105 bits (223), Expect(2) = e-100
Identities = 48/66 (72%), Positives = 52/66 (78%)
Frame = +1 / +2
Query: 49 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVNNIVSVFLV 228
AMAPTVMASSATSVAPFQGLKSTAGLPVSRRS + G+VSNGGRI+CMQV I +
Sbjct: 89 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVYMIYTSSGF 268
Query: 229 IFKQTD 246
FK D
Sbjct: 269 SFKVKD 286
Score = 166 bits (358), Expect(2) = 4e-62
Identities = 72/125 (57%), Positives = 90/125 (72%)
Frame = +2 / +1
Query: 314 FAGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISWV 493
++GVA+ GHQEVRDP++ ATT GG A R+P +QVGALPRVQQGW+ LP* ++S V
Sbjct: 343 YSGVAN*GHQEVRDPIVPATTHRGGSFEADRVPASIQVGALPRVQQGWIRLP*EPQVSRV 522
Query: 494 LRWPVLDNVEAAYVRMHRRHTXXXXXXXXXXXVP*RVCPHHRIRQHASGAVRQLHRLQAT 673
LRW VLD+VEAA+VR+HR H +P +CP+HR+RQ +GAV LHRLQA
Sbjct: 523 LRWQVLDHVEAAHVRLHRCHPGAQGARGGQEGLPRCLCPYHRLRQRQAGAVD*LHRLQAP 702
Query: 674 RLRGV 688
RLRGV
Sbjct: 703 RLRGV 717
Score = 92.3 bits (195), Expect(2) = 4e-62
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +3 / +1
Query: 51 YGPHRDGLVGHLRRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAG 200
YGPHRDGL+GHLR S P AQVHRR PRQPPL + RQRQQ KDQVHAG
Sbjct: 91 YGPHRDGLLGHLRGSIPRAQVHRRAPRQPPLHQLGLRQRQQWRKDQVHAG 240
Score = 138 bits (297), Expect(3) = 8e-61
Identities = 58/78 (74%), Positives = 66/78 (84%)
Frame = -2 / -2
Query: 551 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 372
G+GA+EH QLPH P+PAIVVP R VVLT DE NLAELEARHPLG+ QV+DLL++ L EW
Sbjct: 580 GIGAAEHGQLPHGPIPAIVVPGRPVVLTVDESNLAELEARHPLGSKQVLDLLQKILHGEW 401
Query: 371 WQVRQGLELLDALDGPHL 318
WQVR GLELLDAL+ PHL
Sbjct: 400 WQVR*GLELLDALNWPHL 347
Score = 79.9 bits (168), Expect(3) = 8e-61
Identities = 36/66 (54%), Positives = 42/66 (63%)
Frame = -2 / -3
Query: 245 SVCLKMTRKTETMLFTCMHXXXXXXXXXXXXXPFERRLTGRPAVDLSPWKGATEVADEAI 66
S+ LK + +++TCMH ERRLTG PAVDLSPW GATEVA+EAI
Sbjct: 285 SLTLKEKPEEVYIIYTCMHLILPPLLTLPKPELVERRLTGSPAVDLSPWNGATEVAEEAI 106
Query: 65 TVGAIA 48
TVGAIA
Sbjct: 105 TVGAIA 88
Score = 54.7 bits (113), Expect(3) = 8e-61
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -3 / -3
Query: 691 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASG 593
PDSSQPGGL AMKL +CT LS PM+RT ASG
Sbjct: 720 PDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG 622
Score = 137 bits (293), Expect(4) = 2e-49
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = -3 / -3
Query: 553 VASVHPNIGSFHIVQYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLS 374
VASV PN+GSFH+VQY PS*YPGD SR NPTLLNSRQGTHL+R R S C +R+S +S
Sbjct: 582 VASVQPNMGSFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVS 403
Query: 373 GGK*DRVSNFLMPSMGHTCKSDSRLYIKRL*L 278
GG+ DRVSNFLMPS+GHT ++ ++ I+ +*+
Sbjct: 402 GGRYDRVSNFLMPSIGHT*INNVKI*IRLI*I 307
Score = 48.3 bits (99), Expect(4) = 2e-49
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 115 WT*APGKERRRWPTRPSRWGP* 50
WT*A G E RRWP RPSRWGP*
Sbjct: 155 WT*ALGMEPRRWPRRPSRWGP* 90
Score = 35.0 bits (70), Expect(4) = 2e-49
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 690 RTPRSLVA*RR*S*RTAPDACCRIR*CGHTRQG 592
+TPR+L A RR*S* TAP CR R* G +G
Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621
Score = 33.1 bits (66), Expect(4) = 2e-49
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 204 VYLHAPDPSTVADAAEA 154
+YLHA DPS +AD AEA
Sbjct: 244 IYLHALDPSAIADVAEA 194
Score = 74.8 bits (157), Expect(3) = 6e-22
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -1
Query: 552 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPTW 421
W RC RT AAST S+T HRST+E +HGR QPC*TRGKAPTW
Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRRIQPC*TRGKAPTW 450
Score = 33.6 bits (67), Expect(3) = 6e-22
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 662 GDEADALHLTHVVESDDAD 606
GDEA+ LHL VVE+DD D
Sbjct: 691 GDEANQLHLPDVVEADDTD 635
Score = 33.6 bits (67), Expect(3) = 6e-22
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 378 *VVASKTGSRTS*CPRWATP 319
*VVA GSRTS*CP+ ATP
Sbjct: 407 *VVAGTIGSRTS*CPQLATP 348
Score = 47.3 bits (97), Expect(2) = 4e-11
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = +1 / +3
Query: 475 TTHLLGTTMAGTGQCGSCLCSDAPTP 552
TT L GTTMAG G CGSC CS AP P
Sbjct: 504 TTGLPGTTMAGIGPCGSCPCSAAPMP 581
Score = 40.5 bits (82), Expect(2) = 4e-11
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1 / +3
Query: 304 VNLICRCGPSRASRSSRPCLTCHH 375
++ + RCG RASRSSRP TCHH
Sbjct: 333 LHYLFRCGQLRASRSSRPYRTCHH 404
>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 2281
Score = 279 bits (603), Expect(2) = 1e-99
Identities = 105/125 (84%), Positives = 118/125 (94%)
Frame = +3 / +3
Query: 318 QVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYY 497
QVWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYY
Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 632
Query: 498 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 677
DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPG
Sbjct: 633 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 812
Query: 678 CEESG 692
CEESG
Sbjct: 813 CEESG 827
Score = 105 bits (224), Expect(2) = 1e-99
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = +1 / +2
Query: 49 AMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVNNIV 213
AMAP+VMASSATSVAPFQGLKSTAGLPV+RRS+ +S G+VSNGGRIRCMQV+ +
Sbjct: 203 AMAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQVSETI 367
Score = 189 bits (407), Expect(2) = 8e-65
Identities = 84/124 (67%), Positives = 94/124 (75%)
Frame = -3 / -1
Query: 691 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIV 512
PDSSQPGGL AMKL +CT LS PMMRT ASGY T VASVHPN+GSFH+V
Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647
Query: 511 QYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLMPS 332
QY PS*YPGD SR NPTLLNS+QGTHL+R R S C +R+S ++GGK DRVSNFLMPS
Sbjct: 646 QYLPS*YPGDL*FSR*TNPTLLNSKQGTHLDRSRYSICFKRSSTVNGGKYDRVSNFLMPS 467
Query: 331 MGHT 320
+GHT
Sbjct: 466 IGHT 455
Score = 79.0 bits (166), Expect(2) = 8e-65
Identities = 35/53 (66%), Positives = 35/53 (66%)
Frame = -2 / -2
Query: 200 TCMHXXXXXXXXXXXXXPFERRLTGRPAVDLSPWKGATEVADEAITVGAIAVL 42
TCMH ERR TGRPAVDLSPWKGATEVADEAIT GAIA L
Sbjct: 354 TCMHLILPPLLTLPKLELLERRFTGRPAVDLSPWKGATEVADEAITEGAIASL 196
Score = 117 bits (250), Expect(2) = 2e-40
Identities = 62/130 (47%), Positives = 81/130 (62%)
Frame = +2 / +2
Query: 317 AGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISWVL 496
+GVA GH EVRD V+LA GGP A R+P P+ VGAL VQQG + LP* +I+ +L
Sbjct: 452 SGVAD*GH*EVRDSVVLAAIDSGGPFEADRVPAPI*VGALLGVQQGRIRLP*ESQITRIL 631
Query: 497 RWPVLDNVEAAYVRMHRRHTXXXXXXXXXXXVP*RVCPHHRIRQHASGAVRQLHRLQATR 676
VLD+VE A+V MHR H +P* + HH + Q +GAV QLHR+ AT
Sbjct: 632 *R*VLDHVETAHVWMHRCHPSAQGARGGKEGIP*CLRSHHWL*QR*AGAVNQLHRV*ATG 811
Query: 677 LRGVRQGINS 706
LRGVR+ +++
Sbjct: 812 LRGVRRQLSA 841
Score = 69.3 bits (145), Expect(2) = 2e-40
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +3 / +1
Query: 48 SYGPHRDGLVGHLRRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAG 200
S G DG VGHLR S PGAQVH PP +PPL++ QRQQ KDQ+HAG
Sbjct: 202 SNGSLGDGFVGHLRGSLPGAQVHCGPPGEPPLQQLELWQRQQWRKDQMHAG 354
Score = 112 bits (240), Expect(3) = 2e-33
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = -2 / -3
Query: 551 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 372
G+GAS+H Q PH PVP ++V V+LT DE +LAEL+ARHPL ++QV+DLL++ L +W
Sbjct: 686 GIGASKHGQFPHGPVPTVIVSG*SVILTVDESDLAELQARHPLRSEQVLDLLQKVLHCQW 507
Query: 371 WQVRQGLELLDALDGPHL 318
QVRQ LELL+AL+ PHL
Sbjct: 506 RQVRQSLELLNALNRPHL 453
Score = 37.3 bits (75), Expect(3) = 2e-33
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -1 / -1
Query: 201 YLHAPDPSTVADAAEASTVRXXXXXXXXXGLEPLERS 91
YLHA DPS +AD A+A GLEPLE S
Sbjct: 355 YLHASDPSAIADVAKARAAGAAVHREARSGLEPLEGS 245
Score = 30.9 bits (61), Expect(3) = 2e-33
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1 / -2
Query: 687 TPRSLVA*RR*S*RTAPDACCRIR*CGHTRQG 592
TPR+ VA R*S* TAP C+ +*C QG
Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727
Score = 51.5 bits (106), Expect(4) = 2e-17
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = -1 / -2
Query: 552 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPT 424
W RCI+T A ST SST S + + +HGR +PC*T KAPT
Sbjct: 687 WHRCIQTWAVSTWSSTYRHSIRVICDSHGRRIRPC*TPSKAPT 559
Score = 41.8 bits (85), Expect(4) = 2e-17
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 115 WT*APGKERRRWPTRPS 65
WT*APG+E RRWPT+PS
Sbjct: 269 WT*APGREPRRWPTKPS 219
Score = 30.4 bits (60), Expect(4) = 2e-17
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 375 VVASKTGSRTS*CPRWATP 319
+ AS T SRTS*CP+ ATP
Sbjct: 510 MAASTTESRTS*CPQSATP 454
Score = 29.5 bits (58), Expect(4) = 2e-17
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -2 / -3
Query: 659 DEADALHLTHVVESDDADIRVR 594
DEAD LHL +VV+++DA+ +R
Sbjct: 794 DEAD*LHLPNVVKANDANEGIR 729
Score = 35.4 bits (71), Expect(2) = 1e-05
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 493 TTMAGTGQCGSCLCSDAPTP 552
T GTG CG+C C DAP P
Sbjct: 628 TMTVGTGPCGNCPCLDAPMP 687
Score = 33.6 bits (67), Expect(2) = 1e-05
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 319 RCGPSRASRSSRPCLTCHH 375
RCG RA RSSR C TC H
Sbjct: 454 RCGRLRALRSSRLCRTCRH 510
>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
precursor, putative, expressed
Length = 1248
Score = 276 bits (598), Expect(2) = 3e-97
Identities = 104/124 (83%), Positives = 117/124 (94%)
Frame = +3 / +2
Query: 321 VWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYD 500
VWPIEGIKKFETLSYLPPL+ E LLKQ++YL+RSKWVPCLEFSKVGF++RE++ SPGYYD
Sbjct: 515 VWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYD 694
Query: 501 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGC 680
GRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+KPPGC
Sbjct: 695 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 874
Query: 681 EESG 692
EESG
Sbjct: 875 EESG 886
Score = 99.6 bits (211), Expect(2) = 3e-97
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +1 / +1
Query: 52 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQV 201
MAP+VMASSAT+VAPFQGLKSTAG+PV+RRS +S G+VSNGGRIRCMQV
Sbjct: 265 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQV 414
Score = 191 bits (412), Expect(2) = 1e-59
Identities = 87/129 (67%), Positives = 97/129 (75%)
Frame = -3 / -1
Query: 691 PDSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIV 512
PDSSQPGGL AMKL CT LS PM+RT ASGY T VASVHPN+GSFH+V
Sbjct: 885 PDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMV 706
Query: 511 QYRPS*YPGDALCSRKMNPTLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLMPS 332
QY PS*YPGD SR NPTLLNSRQGTHLER R S C RR+S +SGG+*+RVSNFLMPS
Sbjct: 705 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLERSRYSICFRRSSTVSGGR*ERVSNFLMPS 526
Query: 331 MGHTCKSDS 305
+GHT +D+
Sbjct: 525 IGHT*INDN 499
Score = 62.9 bits (131), Expect(2) = 1e-59
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -2 / -2
Query: 143 ERRLTGRPAVDLSPWKGATEVADEAITVGAIA 48
ERR TG PAVDLSPWKGAT VAD+AIT GAI+
Sbjct: 356 ERRATGMPAVDLSPWKGATVVADDAITEGAIS 261
Score = 164 bits (352), Expect(2) = 1e-57
Identities = 73/125 (58%), Positives = 86/125 (68%)
Frame = +2 / +1
Query: 314 FAGVAHRGHQEVRDPVLLATTQHGGPP*AGRLPDPLQVGALPRVQQGWVHLP*AQRISWV 493
+ GVA GHQEVRDP+L AT GGPP A R+P P QVGALPRVQQG + LP* +I +
Sbjct: 508 YLGVAD*GHQEVRDPLLPATAHRGGPPEADRVPAPFQVGALPRVQQGRIRLP*EPQIPRI 687
Query: 494 LRWPVLDNVEAAYVRMHRRHTXXXXXXXXXXXVP*RVCPHHRIRQHASGAVRQLHRLQAT 673
LRW VLD+VEAA+VR+H RH VP* + P+HR+RQ +GA QLHRLQA
Sbjct: 688 LRWQVLDHVEAAHVRVH*RHPGAQGARGGQEGVP*CIRPYHRLRQRQAGAAHQLHRLQAP 867
Query: 674 RLRGV 688
LRGV
Sbjct: 868 GLRGV 882
Score = 79.9 bits (168), Expect(2) = 1e-57
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +3 / +3
Query: 54 GPHRDGLVGHLRRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAG 200
GP RDG+VGH RRS PGAQVHRR R+PPL + RQRQQ +DQVHAG
Sbjct: 267 GPLRDGVVGHHRRSLPGAQVHRRHARRPPLRQLQLRQRQQWRQDQVHAG 413
Score = 122 bits (260), Expect(3) = 5e-40
Identities = 55/81 (67%), Positives = 61/81 (75%)
Frame = -2 / -3
Query: 551 GVGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNLAELEARHPLGADQVVDLLKEGLRAEW 372
GV A EH QLPH PVPAIVV VVLT DE +LAELEA HPLG +QV+DLL+E L E
Sbjct: 745 GVSAPEHGQLPHGPVPAIVVSGGSVVLTVDESDLAELEAGHPLGTEQVLDLLQEVLHGER 566
Query: 371 WQVRQGLELLDALDGPHLQIR 309
WQV +GLELLDAL+ PHL R
Sbjct: 565 WQVGEGLELLDALNRPHLNKR 503
Score = 44.6 bits (91), Expect(3) = 5e-40
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -1 / -1
Query: 201 YLHAPDPSTVADAAEASTVRXXXXXXXXXGLEPLERSD 88
YLHAPDP+ +AD AEA GLEPLE SD
Sbjct: 414 YLHAPDPAAIADVAEAGVAGAAGDGHAGGGLEPLEGSD 301
Score = 36.8 bits (74), Expect(3) = 5e-40
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 662 GDEADALHLTHVVESDDADIRVR 594
GDEAD LHL VVE+DD D +R
Sbjct: 856 GDEADELHLPDVVEADDTDECIR 788
Score = 68.9 bits (144), Expect(4) = 2e-26
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 552 WRRCIRT*AASTLSSTGHRSTQEMRCAHGR*TQPC*TRGKAPTW 421
WR+C RT AAST SST HRS + + +HGR +PC*TRG+APTW
Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRRIRPC*TRGRAPTW 615
Score = 46.9 bits (96), Expect(4) = 2e-26
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3 / -3
Query: 115 WT*APGKERRRWPTRPSRWGP 53
WT*APG+ERR WPT PSR GP
Sbjct: 328 WT*APGRERRWWPTTPSRRGP 266
Score = 33.6 bits (67), Expect(4) = 2e-26
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1 / -2
Query: 690 RTPRSLVA*RR*S*RTAPDACCRIR*CGHTRQGT 589
+TPRS A RR*S* AP CR R* G QGT
Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQGT 783
Score = 32.7 bits (65), Expect(4) = 2e-26
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 378 *VVASKTGSRTS*CPRWATP 319
* VA + GSRTS*CP+ ATP
Sbjct: 572 *AVAGRRGSRTS*CPQSATP 513
Score = 42.8 bits (87), Expect(2) = 2e-08
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 475 TTHLLGTTMAGTGQCGSCLCSDAPTP 552
TT TTMAGTG CGSC CS A TP
Sbjct: 669 TTDPPDTTMAGTGPCGSCPCSGALTP 746
Score = 35.9 bits (72), Expect(2) = 2e-08
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 319 RCGPSRASRSSRPCLTCH 372
RCG RASRSSRP TCH
Sbjct: 513 RCGRLRASRSSRPSPTCH 566
>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast|
precursor, putative, expressed
Length = 1519
Score = 134 bits (288), Expect(3) = 1e-43
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +3 / +3
Query: 456 GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMR 635
G I R ++ PGYYDGRYWT+WKLPMFGC+DA VL EVEE ++EYPDA++R+I FD+ R
Sbjct: 750 GEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSR 929
Query: 636 QVQCVSFIAFKPPGCEES 689
Q QC+SF+ KPP S
Sbjct: 930 QCQCMSFVVHKPPSAAAS 983
Score = 59.3 bits (123), Expect(3) = 1e-43
Identities = 18/38 (47%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 342 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKV 455
+++E +SYLPPLS +++ K++++++ WVPCLEF KV
Sbjct: 491 RRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKV 604
Score = 27.6 bits (54), Expect(3) = 1e-43
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1 / +1
Query: 151 ASLGSVSNGGRIRCMQVNNIVSVFL 225
A G+ SNG R CMQV+N ++ L
Sbjct: 262 ARRGAASNGFRTYCMQVSNSANMKL 336
Score = 72.5 bits (152), Expect(2) = 2e-15
Identities = 37/79 (46%), Positives = 44/79 (55%)
Frame = -3 / -1
Query: 688 DSSQPGGLKAMKLTHCT*RMLSNPMMRTYASGYXXXXXXXXXXTCVASVHPNIGSFHIVQ 509
+++ GGL K H R+LS M R ASGY T AS HPNIGSFH VQ
Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803
Query: 508 YRPS*YPGDALCSRKMNPT 452
Y PS*YPG L R ++P+
Sbjct: 802 YLPS*YPGIRLLLRWISPS 746
Score = 34.1 bits (68), Expect(2) = 2e-15
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -2 / -1
Query: 452 LAELEARHPLGADQVVDLLKEGLRAEWWQVRQGL 351
L +LEAR P +DLL +GLRA+ QVR L
Sbjct: 601 LVKLEARDPSFGHDELDLLGDGLRAQGRQVRHRL 500
Score = 43.7 bits (89), Expect(2) = 2e-06
Identities = 20/33 (60%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 548 VGASEHRQLPHCPVPAIVVPRRCVVLTEDEPNL 450
V ASEHRQLP PVP +VVPR V D P L
Sbjct: 842 VRASEHRQLPQRPVPPVVVPRHPAVAPVDLPLL 744
Score = 32.2 bits (64), Expect(2) = 2e-06
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3 / -2
Query: 454 TLLNSRQGTHLERIR*STCLRRASVLSGGK*DRVSNFLM 338
TL NSRQGTH + S L L GG+*D S L+
Sbjct: 603 TLSNSRQGTHPLDMMNSISLEMDFALRGGR*DIASYLLL 487
Score = 41.4 bits (84), Expect(2) = 0.006
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 490 GTTMAGTGQCGSCLCSDAPT 549
GTT GTG+CGSC CSDA T
Sbjct: 784 GTTTGGTGRCGSCRCSDALT 843
Score = 22.1 bits (42), Expect(2) = 0.006
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +3
Query: 316 CRCGPSRASRSSRPCLTC 369
CR G + +R CLTC
Sbjct: 465 CRHGTLSPTGGTRRCLTC 518
Score = 33.6 bits (67), Expect = 2.2
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -1 / -2
Query: 549 RRCIRT*AASTLSSTGHRSTQEMRCAHG 466
R+ IRT AAST SST RST C G
Sbjct: 843 RQSIRTSAASTASSTSRRSTPASGCCSG 760
>LOC_Os08g26710:12008.t02435:unspliced-genomic expressed protein|
Length = 11854
Score = 40.0 bits (81), Expect = 0.026
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3 / +3
Query: 795 YLFLRICVCPCSCTNMARENMLVCECCRWLCICTYA*YYTIIC 923
Y+++ +CVC C C + + C ++ ICTY Y +C
Sbjct: 4908 YIYICVCVCVCVCVYICIYVYIYIYICIYVYICTYMYIYVYVC 5036
Score = 33.1 bits (66), Expect = 3.1
Identities = 11/58 (18%), Positives = 25/58 (43%)
Frame = +3 / +2
Query: 747 CQL*HCFGFSFSIYLSYLFLRICVCPCSCTNMARENMLVCECCRWLCICTYA*YYTII 920
C + + + + Y+++ +CVC C C + + C ++ +C Y Y +
Sbjct: 5030 CMYMYIYIYVYVCICIYMYMYVCVCVCVCVCVCVYIYVCVYMCVYVYVCMYVCMYVYV 5203
Score = 26.7 bits (52), Expect(2) = 3.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 795 YLFLRICVCPCSC 833
Y+++ ICVC C C
Sbjct: 4902 YIYIYICVCVCVC 4940
Score = 23.1 bits (44), Expect(2) = 3.6
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 879 WLCICTYA*YYTIIC 923
++CIC Y Y +C
Sbjct: 5050 YICICMYMYIYVYVC 5094
Score = 26.7 bits (52), Expect(2) = 4.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 795 YLFLRICVCPCSCTNM 842
Y+++ +CVC C C M
Sbjct: 4910 YIYMCVCVCVCVCIYM 4957
Score = 22.6 bits (43), Expect(2) = 4.8
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +3 / +2
Query: 879 WLCICTYA*YYTIIC 923
++CIC Y Y +C
Sbjct: 5060 YVCICIYMYMYVCVC 5104
Score = 25.4 bits (49), Expect(2) = 8.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 795 YLFLRICVCPCSC 833
Y+++ +CVC C C
Sbjct: 5084 YMYVCVCVCVCVC 5122
Score = 23.1 bits (44), Expect(2) = 8.6
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3 / +1
Query: 882 LCICTYA*YYTIIC 923
+CIC Y Y IC
Sbjct: 5161 ICICMYVCMYVCIC 5202
>LOC_Os02g28074:12002.t02500:unspliced-genomic XRN 5-3 exonuclease N-terminus family protein, expressed|
Length = 16540
Score = 36.3 bits (73), Expect = 0.33
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3 / -3
Query: 810 ICVCPCSCTNMARENMLVCECCRWLCICTYA*YYTIIC 923
IC+C C C + + C +CIC Y Y +C
Sbjct: 3353 ICICICICIYICMYMYMYIYICICICICIYVYVYIYVC 3240
Score = 25.8 bits (50), Expect(2) = 6.3
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3 / -3
Query: 795 YLFLRICVCPCSC 833
Y+++ IC+C C C
Sbjct: 3308 YMYIYICICICIC 3270
Score = 23.1 bits (44), Expect(2) = 6.3
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3 / -2
Query: 879 WLCICTYA*YYTIIC 923
++CIC Y Y IC
Sbjct: 3270 YICICIYICMYMYIC 3226
>LOC_Os07g04180:12007.t00306:unspliced-genomic amino acid permease 6, putative, expressed|
Length = 6048
Score = 35.9 bits (72), Expect(2) = 0.43
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1 / +1
Query: 903 MRTCIYIATDSIHIQACFLEPCW 835
++ CIYIA D+ H+ C PCW
Sbjct: 2890 VQKCIYIAWDT*HVGFCLYHPCW 2958
Score = 23.1 bits (44), Expect(2) = 0.43
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2 / +2
Query: 398 LKEGLRAEWWQVRQGLELLDALDGPHLQIRFTSIH 294
L GLR + R G+ LL L PH + + H
Sbjct: 5153 LAHGLRRAHRRRRHGVPLLQRLPRPHRRRLLLAAH 5257
>LOC_Os01g13610:12001.t01222:unspliced-genomic isoflavone reductase homolog IRL, putative, expressed|
Length = 5482
Score = 29.5 bits (58), Expect(2) = 0.49
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / +1
Query: 81 HLRRSFPGAQVHRRPPRQPP 140
HLR G ++H PPR+PP
Sbjct: 2551 HLRLQLLGPRLHAPPPRRPP 2610
Score = 23.5 bits (45), Expect(2) = 0.49
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3 / +1
Query: 117 RRPPRQPPLERC*PRQRQQRWKDQVHAGKQH 209
RRPPR+PP R R++ ++ + H
Sbjct: 2599 RRPPRRPPSGHRRHRLRRRHPARLINRSRDH 2691
>LOC_Os12g26980:12012.t02411:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 4100
Score = 30.9 bits (61), Expect(2) = 0.50
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 765 FGFSFSIYLSYLFLRICVCPCSC 833
FG+ + Y+++ ICVC C C
Sbjct: 3333 FGYIYIYIYIYIYIYICVCVCVC 3401
Score = 22.1 bits (42), Expect(2) = 0.50
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1 / +1
Query: 811 YVYVHVHVPTWLEKTCLYVNAVGGY 885
Y+Y H+H+ +Y+N V Y
Sbjct: 3412 YIYTHMHLHNIYIYKYIYINHVYMY 3486
>LOC_Os03g42760:12003.t03677:unspliced-genomic ubiquitin-protein ligase/ zinc ion binding protein, putative,|
expressed
Length = 4018
Score = 26.7 bits (52), Expect(4) = 0.55
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3 / +2
Query: 810 ICVCPCSCTNMARENMLVCE 869
+CVC C C ++ R ++L E
Sbjct: 3815 VCVCVCVCVSVCRFDLLTPE 3874
Score = 24.0 bits (46), Expect(4) = 0.55
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +3 / +2
Query: 774 SFSIYLSYLFLRICVCPCSC 833
++ + Y+ + +CVC C C
Sbjct: 3767 AYQVSYIYICVCVCVCVCVC 3826
Score = 22.6 bits (43), Expect(4) = 0.55
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2 / +1
Query: 332 RGHQEVRDPVLLATTQHGGPP 394
RG Q+ P LLA HG P
Sbjct: 1 RGDQKNPTPPLLAAAAHGQRP 63
Score = 22.6 bits (43), Expect(4) = 0.55
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1 / +2
Query: 496 TMAGTGQCGSCLCSD 540
T T CG C C+D
Sbjct: 1703 TDVSTMDCGHCFCND 1747
>LOC_Os03g47530:12003.t04111:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed|
Length = 1578
Score = 32.7 bits (65), Expect(2) = 0.58
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3 / +1
Query: 774 SFSIYLSYLFLRICVCPCSC 833
SF L FL CVCPC C
Sbjct: 1255 SFEFLLDLNFLSFCVCPCGC 1314
Score = 24.0 bits (46), Expect(2) = 0.58
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 129 RQPPLERC*PRQRQ 170
R+PPLE PR+RQ
Sbjct: 890 RRPPLEPARPRRRQ 931
>LOC_Os09g04200:12009.t00316:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 2456
Score = 30.4 bits (60), Expect(2) = 0.69
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3 / -2
Query: 762 CFGFSFSIYLSYLFLRICVCPCSCTN 839
C+ I ++++ ICVC C C N
Sbjct: 1261 CYNTYICIIYRHIYIYICVCVCVCIN 1184
Score = 22.1 bits (42), Expect(2) = 0.69
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3 / -3
Query: 882 LCICTYA*YYTIIC 923
+C+C YYT IC
Sbjct: 1203 VCVCV*IIYYTHIC 1162
>LOC_Os08g44870:12008.t04260:unspliced-genomic transparent testa 12 protein, putative, expressed|
Length = 2051
Score = 26.3 bits (51), Expect(3) = 0.80
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3 / +3
Query: 57 PHRDGLVGHLRRSFPGAQVHRRPPRQPPLER 149
PHR LR VHR P + PP R
Sbjct: 159 PHRHRHHHQLRHQLRDHHVHRPPRKPPPRRR 251
Score = 26.3 bits (51), Expect(3) = 0.80
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2 / +3
Query: 365 LATTQHGGPP*AGRLPDPL 421
+A HGG P GRLP P+
Sbjct: 756 VARVVHGGVPRPGRLPPPV 812
Score = 22.6 bits (43), Expect(3) = 0.80
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 611 HHRIRQHASGAVR 649
HH +Q A+GAVR
Sbjct: 1182 HHGAQQRAAGAVR 1220
>LOC_Os01g08470:12001.t00725:unspliced-genomic protein binding protein, putative, expressed|
Length = 2275
Score = 28.6 bits (56), Expect(3) = 0.95
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1 / +2
Query: 43 STAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLG 162
+TA A T +SAT +P ++TA SRR++ G
Sbjct: 722 TTASASTSRTTSATRRSPSSSSRTTASAAASRRASATCPG 841
Score = 23.5 bits (45), Expect(3) = 0.95
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 331 SRASRSSRPC 360
S ASRSSRPC
Sbjct: 1232 SSASRSSRPC 1261
Score = 23.1 bits (44), Expect(3) = 0.95
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2 / +2
Query: 599 RVCPHHRIRQHASGAVRQ 652
R C HH R+H + A Q
Sbjct: 1469 RSCRHHHRRRHPAAAQHQ 1522
>LOC_Os09g16950:12009.t01482:unspliced-genomic protein kinase, putative, expressed|
Length = 3209
Score = 28.6 bits (56), Expect(2) = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / +2
Query: 106 APGKERRRWPTRPSRWGP 53
A + RRWP R SRW P
Sbjct: 848 AAARTTRRWP*RSSRWTP 901
Score = 28.1 bits (55), Expect(2) = 1.1
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3 / +2
Query: 892 HIHSHRQHSHTSMFSRAMLVHEHGHTH 812
H H HR H H H H H H
Sbjct: 374 HRHCHRHHHHIHFHLHGHHRHRHKHHH 454
>LOC_Os03g47330:12003.t04095:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 1932
Score = 26.7 bits (52), Expect(2) = 1.3
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 771 FSFSIYLSYLFLRICVC 821
++ +I+ SY+++ IC+C
Sbjct: 998 YNVNIFWSYIYIHICIC 1048
Score = 24.9 bits (48), Expect(2) = 1.3
Identities = 4/19 (21%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 811 YVYVHVHVPTWLEKTCLYV 867
Y+Y+++++ ++ K C+++
Sbjct: 1114 YIYIYIYIYIYIYKICMHI 1170
>LOC_Os02g55640:12002.t05139:unspliced-genomic proteasome maturation factor UMP1 family protein, expressed|
Length = 2354
Score = 25.8 bits (50), Expect(3) = 1.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +3
Query: 102 GAQVHRRPPRQPPLERC*PRQ 164
G + RR PR+PPL R RQ
Sbjct: 87 GEEGDRREPRRPPLRRQRQRQ 149
Score = 25.8 bits (50), Expect(3) = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 783 IYLSYLFLRICVCPCSC 833
I L+ FL +CVC C C
Sbjct: 609 IALAVSFLCVCVCVCVC 659
Score = 23.1 bits (44), Expect(3) = 1.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3 / +1
Query: 810 ICVCPCSCTNMARENMLVCECCRWLCICTYA*YYTIICQLYT 935
+CVC SC + + L+ C + Y * Y QLY+
Sbjct: 646 VCVCVSSCKSGSSSLHLLQVCNSFPMCILYQ*CYVGGHQLYS 771
>LOC_Os11g23810:12011.t02001:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 5483
Score = 26.3 bits (51), Expect(2) = 1.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3 / +1
Query: 904 YAYVHIHSHRQHSHTSMFSRAMLVHEHGHTHILR 803
Y Y++IH H + M+ ++H H + +I +
Sbjct: 4690 YIYIYIHIHMHLHNIYMYKYIYIMHVHMY*NIYK 4791
Score = 24.9 bits (48), Expect(2) = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3 / +2
Query: 976 IFFFFLFSIGYH*NVYS*HIIV*YYAYVHI 887
+F + I Y+ N+Y HI + Y Y +I
Sbjct: 4628 MFLYACVHIFYNVNIYFGHIYIYIYIYTYI 4717
>LOC_Os02g47860:12002.t04370:unspliced-genomic uridine kinase, putative, expressed|
Length = 6315
Score = 30.9 bits (61), Expect(2) = 2.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3 / +1
Query: 81 HLRRSFPGAQVHRRPPRQPPLERC*PRQR 167
H RR P + PP+QPPL R R+R
Sbjct: 175 HARRLLPRTRRGEAPPKQPPLLRARRRRR 261
Score = 25.8 bits (50), Expect(2) = 2.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3 / +1
Query: 357 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREH 476
LSY P + TE L D+L + + + C+ + + + + H
Sbjct: 1459 LSYHPVIWTELPLHLKDFLNKHRTILCIHLNALSYSYFLH 1578
>LOC_Os08g23640:12008.t02136:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 1858
Score = 29.0 bits (57), Expect(2) = 2.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1 / -2
Query: 73 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCM 195
S++ APF ++TA ++R ++ + S +GGR+ C+
Sbjct: 1002 SASPGRAPFGWPRATAPSCLTRGTSNTFVASTPSGGRVSCL 880
Score = 25.8 bits (50), Expect(2) = 2.2
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3 / -3
Query: 477 NASPGYYDGRYWTMWKLPMFGCTDA 551
NAS G + WTMW C A
Sbjct: 197 NASRGAVPSKLWTMWSAASRTCARA 123
>LOC_Os12g10630:12012.t00941:unspliced-genomic ZF-HD homeobox protein, putative, expressed|
Length = 3221
Score = 29.5 bits (58), Expect(2) = 2.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 108 QVHRRPPRQPPLERC*PRQRQQR 176
Q H RPP PPL R R+R++R
Sbjct: 1923 QAHPRPPPPPPLPRRRRRRRRRR 1991
Score = 25.8 bits (50), Expect(2) = 2.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 798 LFLRICVCPCSCTNMA 845
L + ICV PCSC +A
Sbjct: 2478 LIIPICVSPCSCC*LA 2525
>LOC_Os11g14130:12011.t01245:unspliced-genomic mTERF family protein, expressed|
Length = 2706
Score = 26.3 bits (51), Expect(3) = 2.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2 / +1
Query: 353 DPVLLATTQHGGPP*AGRLPDPLQVGALPRV 445
DP L + G P RLP+ +G LPR+
Sbjct: 523 DPQLPHVRRRGAPRLVRRLPEARVLGPLPRL 615
Score = 25.4 bits (49), Expect(3) = 2.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3 / +1
Query: 87 RRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAGKQHR 212
RR+ P + RRP PL R R+R++R + HR
Sbjct: 349 RRARPPLLLRRRPRLPLPLPRGPRRRRRRRAAAAPREARHHR 474
Score = 22.1 bits (42), Expect(3) = 2.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 813 CVCPCSCTNMA 845
C+C CSC +A
Sbjct: 1249 CLCRCSCWQIA 1281
>LOC_Os06g03800:12006.t00271:unspliced-genomic ankyrin repeat domain-containing protein 28, putative, expressed|
Length = 5339
Score = 32.2 bits (64), Expect(2) = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1 / +3
Query: 552 WRRCIRT*AASTLSSTGHRSTQEMRC 475
WRRC T +AST SST ++ RC
Sbjct: 2733 WRRCTGTSSASTCSSTSAPASPRRRC 2810
Score = 23.5 bits (45), Expect(2) = 3.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 835 VHEHGHTHILRNK*ER*MEKENPKQ 761
+H H H H+++ K E ++E K+
Sbjct: 930 IHTHTHMHVIKEKKEFERKRE*KKK 1004
>LOC_Os12g18010:12012.t01652:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 10182
Score = 26.3 bits (51), Expect(2) = 3.7
Identities = 5/19 (26%), Positives = 15/19 (78%)
Frame = +1 / -1
Query: 811 YVYVHVHVPTWLEKTCLYV 867
Y+Y+++++ ++ K C+Y+
Sbjct: 5736 YIYIYIYIYIYIYKPCIYM 5680
Score = 23.5 bits (45), Expect(2) = 3.7
Identities = 7/32 (21%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 845 SRKHACM*MLSVAMYMHVRIILYNNMSTIYVL 940
++ H C+ + + +Y+H R ++ ++ T V+
Sbjct: 5659 TQMHMCIYIYMIKIYLHYRKCVHMHIETYVVM 5564
>LOC_Os07g09420:12007.t00817:unspliced-genomic ATPase 2, putative, expressed|
Length = 1753
Score = 27.6 bits (54), Expect(2) = 3.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3 / +2
Query: 96 FPGAQVHRRPPRQPP 140
FPGA+ RRP R PP
Sbjct: 572 FPGARPRRRPRRVPP 616
Score = 26.3 bits (51), Expect(2) = 3.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1 / +1
Query: 490 GTTMAGTGQCGSCLCSDAP 546
GTT G CG+ CS P
Sbjct: 700 GTTAGGARACGATWCSSTP 756
>LOC_Os01g09260:12001.t00804:unspliced-genomic cytokinin dehydrogenase 1 precursor, putative, expressed|
Length = 2479
Score = 31.8 bits (63), Expect(2) = 5.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3 / +3
Query: 57 PHRDGLVGHLRRSFPGAQVHRRPPRQPPLERC*PRQRQQRWKDQVHAGKQHR 212
P R G R PGA VHR PR PL +R++R + G++ R
Sbjct: 231 PRRRGGAPARRLRRPGAAVHRLVPRPRPLHHGPGPRRRRRRRPHAVHGRRRR 386
Score = 22.1 bits (42), Expect(2) = 5.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1 / +1
Query: 505 GTGQCGSCLCSDAPTP 552
G G C SC + P+P
Sbjct: 1525 GRGGCASCTPTSPPSP 1572
>LOC_Os05g51400:12005.t04568:unspliced-genomic protein kinase APK1B, chloroplast precursor, putative|
Length = 4166
Score = 25.4 bits (49), Expect(2) = 5.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3 / -3
Query: 907 YYAYVHIHSHRQHSHT 860
Y HIH+H+ ++HT
Sbjct: 1467 YLFLTHIHTHKHNTHT 1420
Score = 24.0 bits (46), Expect(2) = 5.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3 / -1
Query: 871 HSHTSMFSRAMLVHEHGHTHIL 806
H++T+ + H H HTH L
Sbjct: 1442 HTNTTHTHTHTITHTHTHTHTL 1377
>LOC_Os02g26770:12002.t02371:unspliced-genomic trans-cinnamate 4-monooxygenase, putative, expressed|
Length = 2020
Score = 25.4 bits (49), Expect(2) = 5.6
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / +2
Query: 870 CCRWLCI 890
CCRWLC+
Sbjct: 194 CCRWLCL 214
Score = 24.0 bits (46), Expect(2) = 5.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3 / +2
Query: 819 CPCSCTNMARENMLVCECC 875
C CS + R ++L+ CC
Sbjct: 140 CICSSSRSCRRSILLSPCC 196
>LOC_Os01g67090:12001.t06065:unspliced-genomic SF16 protein, putative, expressed|
Length = 4128
Score = 29.9 bits (59), Expect(2) = 5.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3 / +3
Query: 762 CFGFSFSIYLSYLFLRICVCPCSCTNMARENMLVCECCRWL 884
CFG F + S+L R C P T LV RWL
Sbjct: 3981 CFGKKFLSFCSFLVGRDCQSPSRATTTRTLKTLVVS*KRWL 4103
Score = 24.4 bits (47), Expect(2) = 5.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1 / +1
Query: 517 CGSCLCSDAPTP 552
CG+C CS A +P
Sbjct: 1966 CGACRCSSASSP 2001
>LOC_Os12g05230:12012.t00412:unspliced-genomic ATP-dependent RNA helicase, putative, expressed|
Length = 2999
Score = 28.1 bits (55), Expect(2) = 8.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3 / +2
Query: 762 CFGFSFSIYLSYLFLRICVCPCSCTNMAREN 854
CF F+ + Y+S FL+ C C + N
Sbjct: 2420 CFSFTLTTYISLDFLQCWAD*CPCERLGEHN 2512
Score = 25.4 bits (49), Expect(2) = 8.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3 / +1
Query: 123 PPRQPPLERC*PRQRQQRWKDQVHAGKQHR 212
PP PP PR+R++R + ++ A + R
Sbjct: 361 PPPPPPQAGTNPRRRRRRRRRRIRAPRSSR 450
>LOC_Os02g26014:12002.t02294:unspliced-genomic sesquiterpene cyclase, putative, expressed|
Length = 19596
Score = 25.8 bits (50), Expect(2) = 8.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +3 / -3
Query: 864 CECCRWLCICTYA*YYTIICQLY 932
C CC C C Y YY +Y
Sbjct: 16927 CCCCCCCCCCCYYYYYYYYYYIY 16859
Score = 22.6 bits (43), Expect(2) = 8.2
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = +3 / -3
Query: 786 YLSYLFLRICVCPCSC 833
Y +Y + C C C C
Sbjct: 17035 YYNYYYYYCCCCCCCC 16988
>LOC_Os01g45274:12001.t03984:unspliced-genomic carbonic anhydrase, chloroplast precursor, putative, expressed|
Length = 12374
Score = 31.3 bits (62), Expect(2) = 8.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3 / +1
Query: 759 HCFGFSFSIYLSYLFLRICVCPCSCTN 839
HCF +L Y++ + C C+C+N
Sbjct: 9310 HCFSLFLFSFLKYVYS*LIACYCTCSN 9390
Score = 24.0 bits (46), Expect(2) = 8.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3 / +3
Query: 90 RSFPGAQVHRRPPRQPP 140
+S P + H RPP PP
Sbjct: 4077 QSSPASPPHHRPPPPPP 4127
>LOC_Os01g66900:12001.t06048:unspliced-genomic dopamine beta-monooxygenase, putative, expressed|
Length = 1282
Score = 26.7 bits (52), Expect(2) = 9.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 112 T*APGKERRRWPTRPSRWGP 53
T +P + R WPTRP R P
Sbjct: 443 TASPCRRRPAWPTRPPRCPP 384
Score = 25.4 bits (49), Expect(2) = 9.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 516 LSSTGHRSTQEMRC 475
+SSTGHR +RC
Sbjct: 1220 ISSTGHRKLSRLRC 1179
>LOC_Os03g11980:12003.t00999:unspliced-genomic beta-hexosaminidase beta chain precursor, putative, expressed|
Length = 2578
Score = 27.6 bits (54), Expect(2) = 9.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 316 CRCGPSRASRSSRPCLT 366
CRCGPSR RP T
Sbjct: 195 CRCGPSRRPSRGRPRCT 245
Score = 25.4 bits (49), Expect(2) = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2 / +1
Query: 608 PHHRIRQHASGAVRQLHRLQATR 676
PH R A+G+ RQLH L R
Sbjct: 325 PHPRRAPRAAGSPRQLHPLPRPR 393
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 386,314,898
Number of extensions: 6404384
Number of successful extensions: 40836
Number of sequences better than 10.0: 110
Length of query: 326
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 276
Effective length of database: 52,799,986
Effective search space: 14572796136
Effective search space used: 14572796136
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)