ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf16h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070767:Os07g0122900 28 2.9
2Os12g0288900:Os12g0288900 28 3.8
3AK111072:Os04g0482700 28 3.8
4AK099786:Os11g0633800 28 3.8
5AK101515:Os12g0172500 27 5.0
6Os06g0521600:Os06g0521600 27 6.5
7Os04g0290800:Os04g0290800 27 8.5

>AK070767:Os07g0122900 |
          Length = 386
 Score = 28.1 bits (61), Expect = 2.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 300 WPPWTEAARRSRDPHRPQPPFIISIYVCLVSQLDQKNC 413
           W P T   RR R+P+     F  +  +C V   D  +C
Sbjct: 119 WDPMTGDVRRQREPYGTLCTFATAAVLCAVPGCDHHDC 156



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>Os12g0288900:Os12g0288900 |
          Length = 204

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 381 CLVSQLDQKNCIRYFCTAFHNKHIYG 458
           C+V  +D KNC  + C+     H+ G
Sbjct: 115 CVVKNMDWKNCAHHACSEIRANHLSG 140



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>AK111072:Os04g0482700 |
          Length = 205

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 381 CLVSQLDQKNCIRYFCTAFHNKHIYG 458
           C+V  +D KNC  + C+     H+ G
Sbjct: 116 CVVKDMDWKNCAHHACSEIRANHLSG 141



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>AK099786:Os11g0633800 |
          Length = 523

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 359 RRLRPVGVSAAPCGLRPWR 303
           RRL P G++AA C  +PWR
Sbjct: 15  RRLPPRGLAAARCVCKPWR 33



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>AK101515:Os12g0172500 |
          Length = 575

 Score = 27.3 bits (59), Expect = 5.0
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 194 PFSSWRLCTWSV*DIS-CPDGASYILAKGRVGY 99
           P + W +C  S+  IS  PDGA Y+   GR GY
Sbjct: 307 PIARWHVCQGSINAISFSPDGA-YLATVGRDGY 338



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>Os06g0521600:Os06g0521600 |
          Length = 686

 Score = 26.9 bits (58), Expect = 6.5
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 6/27 (22%)
 Frame = +3

Query: 297 PWPPWTEAA------RRSRDPHRPQPP 359
           P PP   AA      RR RDPH P PP
Sbjct: 117 PPPPSASAATATPIRRRHRDPHPPPPP 143



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>Os04g0290800:Os04g0290800 |
          Length = 658

 Score = 26.6 bits (57), Expect = 8.5
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = -1

Query: 200 RQPFSSWRLCTWSV*DISCPDGASYILAKGRVGYYIWXXXXXXXKQPPRVVLCSALL-SC 24
           RQ   SWR C      +  PDG    ++   + Y +W        Q   V+   ALL + 
Sbjct: 179 RQLELSWRRCATVAVQLLLPDGYPDSVSSDYLQYSLWRGVQGIASQISGVLSTQALLYAV 238

Query: 23  GFGK 12
           G GK
Sbjct: 239 GLGK 242


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 11,549,174
Number of extensions: 206805
Number of successful extensions: 614
Number of sequences better than 10.0: 7
Number of HSP's gapped: 614
Number of HSP's successfully gapped: 7
Length of query: 157
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 65
Effective length of database: 11,716,083
Effective search space: 761545395
Effective search space used: 761545395
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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