ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf16h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6GL41:MCM4_XENTR DNA replication licensing factor mcm4 - Xenopu... 29 8.6

>Q6GL41:MCM4_XENTR DNA replication licensing factor mcm4 - Xenopus tropicalis (Western|
           clawed frog) (Silurana tropicalis)
          Length = 863
 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 16  PKPQERRAEQSTTLGGCXXXXXXXXHI**PTLPFAKMYDAPSGQEMSYTDHVQRRH 183
           P  Q RR E ST++G              PT P   +  +PSGQE+ ++     RH
Sbjct: 32  PPSQRRRTEDSTSIGELLPM---------PTSPSGDL-QSPSGQELMFSSPAPSRH 77


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 66,184,114
Number of extensions: 1117289
Number of successful extensions: 2568
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2568
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 100,686,439
Length adjustment: 104
Effective length of query: 53
Effective length of database: 72,159,759
Effective search space: 3824467227
Effective search space used: 3824467227
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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