ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf13e21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AY224448:Os07g0148900 | 233 | 5e-62 | 2 | AK058788:Os07g0148900 | 233 | 5e-62 | 3 | AK098847:Os09g0481200 | 48 | 4e-06 | 4 | AK061695:Os09g0481200 | 48 | 4e-06 | 5 | AJ417528: | 34 | 0.062 | 6 | AK108567:Os02g0189200 | 30 | 0.32 | 7 | AK119877: | 29 | 2.6 | 8 | AK104606:Os07g0155200 | 29 | 2.6 | 9 | AK061006:Os07g0155200 | 29 | 2.6 | 10 | Os04g0439200:Os04g0439200 | 28 | 3.4 | 11 | AK109017: | 28 | 4.5 | 12 | AK107361: | 28 | 5.8 | 13 | AK119971: | 28 | 5.8 | 14 | AK099541:Os05g0463700 | 27 | 7.5 | 15 | AK070600:Os02g0143200 | 27 | 9.8 |
|---|
>AY224448:Os07g0148900 | Length = 133 Score = 233 bits (595), Expect = 5e-62 Identities = 118/130 (90%), Positives = 125/130 (96%), Gaps = 2/130 (1%) Frame = +2 Query: 53 QLSAMTSVPQFHGLRTYSSPRSMATLPSLR--RRRSQGIRCDYIGSSTNLIMVTTTTLML 226 QLSA TSVPQFHGLRTYSSPRSM TLPSLR ++RSQGIRCDYIGS+TN+IMVTTTTLML Sbjct: 4 QLSAATSVPQFHGLRTYSSPRSMVTLPSLRMSKKRSQGIRCDYIGSATNVIMVTTTTLML 63 Query: 227 FAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVGIVLGLK 406 FAGRFGLAPSANRK+TAGLKLEAR+SGLQTGDPAGFTLADTLACGAVGHIMGVG+VLGLK Sbjct: 64 FAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGAVGHIMGVGVVLGLK 123 Query: 407 NTGVLDQIIG 436 N GVLDQIIG Sbjct: 124 NIGVLDQIIG 133
>AK058788:Os07g0148900 | Length = 133 Score = 233 bits (595), Expect = 5e-62 Identities = 118/130 (90%), Positives = 125/130 (96%), Gaps = 2/130 (1%) Frame = +2 Query: 53 QLSAMTSVPQFHGLRTYSSPRSMATLPSLR--RRRSQGIRCDYIGSSTNLIMVTTTTLML 226 QLSA TSVPQFHGLRTYSSPRSM TLPSLR ++RSQGIRCDYIGS+TN+IMVTTTTLML Sbjct: 4 QLSAATSVPQFHGLRTYSSPRSMVTLPSLRMSKKRSQGIRCDYIGSATNVIMVTTTTLML 63 Query: 227 FAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVGIVLGLK 406 FAGRFGLAPSANRK+TAGLKLEAR+SGLQTGDPAGFTLADTLACGAVGHIMGVG+VLGLK Sbjct: 64 FAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGAVGHIMGVGVVLGLK 123 Query: 407 NTGVLDQIIG 436 N GVLDQIIG Sbjct: 124 NIGVLDQIIG 133
>AK098847:Os09g0481200 | Length = 141 Score = 48.1 bits (113), Expect = 4e-06 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 18/131 (13%) Frame = +2 Query: 71 SVPQFHGLRTYSSPR----SMATLPSLRRRRSQGIRCDYIGSSTNLIMVTTTTLMLFAGR 238 S P GLR SPR S+A + RRRS R + S +L++ +T + LF GR Sbjct: 7 SPPTVAGLRLAPSPRVRSPSVAFRAAPARRRSVAARAEL---SPSLVISLSTGVSLFLGR 63 Query: 239 FGL-----------APSANRKA--TAGLKLEARESGL-QTGDPAGFTLADTLACGAVGHI 376 F P N K AG + +GL ++ DP GF L D LA G++GHI Sbjct: 64 FVFFNFQRENVAKQVPEQNGKTHFDAGDERAKEFAGLLRSNDPVGFNLVDVLAWGSLGHI 123 Query: 377 MGVGIVLGLKN 409 + I+ N Sbjct: 124 VAYYILATCSN 134
>AK061695:Os09g0481200 | Length = 141 Score = 48.1 bits (113), Expect = 4e-06 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 18/131 (13%) Frame = +2 Query: 71 SVPQFHGLRTYSSPR----SMATLPSLRRRRSQGIRCDYIGSSTNLIMVTTTTLMLFAGR 238 S P GLR SPR S+A + RRRS R + S +L++ +T + LF GR Sbjct: 7 SPPTVAGLRLAPSPRVRSPSVAFRAAPARRRSVAARAEL---SPSLVISLSTGVSLFLGR 63 Query: 239 FGL-----------APSANRKA--TAGLKLEARESGL-QTGDPAGFTLADTLACGAVGHI 376 F P N K AG + +GL ++ DP GF L D LA G++GHI Sbjct: 64 FVFFNFQRENVAKQVPEQNGKTHFDAGDERAKEFAGLLRSNDPVGFNLVDVLAWGSLGHI 123 Query: 377 MGVGIVLGLKN 409 + I+ N Sbjct: 124 VAYYILATCSN 134
>AJ417528: | Length = 74 Score = 34.3 bits (77), Expect = 0.062 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 308 LQTGDPAGFTLADTLACGAVGHIMGVGIVLGLKN 409 L++ DP GF L D LA G++GHI+ I+ N Sbjct: 34 LRSNDPVGFNLVDVLAWGSLGHIVAYYILATCSN 67
>AK108567:Os02g0189200 | Length = 122 Score = 29.6 bits (65), Expect(2) = 0.32 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Frame = +2 Query: 104 SSPRSMATLPSLRRRRSQGIR-----CDYIGSSTNLIMVTTTTLMLFAGRFGLAPSANRK 268 S P S ++ P+ RRRR R C ST TTTT +G L +A Sbjct: 19 SCPSSSSSSPASRRRRPARARSRRSSCSATPRSTR---ATTTTSPRSSGATSLPTAATSS 75 Query: 269 ATAGLKLEARESGLQTGDP 325 + A EA +G G P Sbjct: 76 SPAPASAEAEMAGPPAGSP 94 Score = 21.2 bits (43), Expect(2) = 0.32 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 Query: 309 CRRATRPVSRSPT 347 CRR++RP S P+ Sbjct: 109 CRRSSRPTSTRPS 121
>AK119877: | Length = 783 Score = 28.9 bits (63), Expect = 2.6 Identities = 22/74 (29%), Positives = 33/74 (44%) Frame = -1 Query: 345 SASVKPAGSPVCSPDSRASSLSPAVAFLFADGASPNRPAKSIRVVVVTMMRLVEEPM*SQ 166 +A V A SP + S A + +PA D ++P R R+V + RL P Q Sbjct: 653 TAGVAAATSPTVNTASVAPTSAPAKRDANTDASAPPRMPPYPRIVKIEERRLPNSP---Q 709 Query: 165 RMPWDLLLLKDGSV 124 ++LL DG + Sbjct: 710 PYCQQMILLDDGKI 723
>AK104606:Os07g0155200 | Length = 301 Score = 28.9 bits (63), Expect = 2.6 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -1 Query: 354 ASVSASVKPAGSPVCSPDSRASSLSPAVAFLFAD 253 A+ S+ ++ A P CSP S SL PAV AD Sbjct: 24 AAASSCIRRASLPYCSPGSYPRSLLPAVRAAGAD 57
>AK061006:Os07g0155200 | Length = 301 Score = 28.9 bits (63), Expect = 2.6 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -1 Query: 354 ASVSASVKPAGSPVCSPDSRASSLSPAVAFLFAD 253 A+ S+ ++ A P CSP S SL PAV AD Sbjct: 24 AAASSCIRRASLPYCSPGSYPRSLLPAVRAAGAD 57
>Os04g0439200:Os04g0439200 | Length = 804 Score = 28.5 bits (62), Expect = 3.4 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = +2 Query: 182 SSTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACG 361 +ST I+ + + G L P +ATA L + LQ GD ++ T+ C Sbjct: 686 ASTEEIVEAMASSLATVGSLSL-PEKQAQATAELATKMLLKSLQAGDVVFGKVSRTVYCA 744 Query: 362 AVGHIMGVGIVLGLK 406 G ++G G V G K Sbjct: 745 FRGVVLGGGGVKGKK 759
>AK109017: | Length = 219 Score = 28.1 bits (61), Expect = 4.5 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 336 VKPAGSPVCSPDSRASSLSPAVAFLFADGASPNRPAKSI 220 V A +PV +P A+ +PA A A A+P PA ++ Sbjct: 101 VVQAAAPVAAPAPAAAPAAPAAAPAAAPAAAPKAPAPAV 139
>AK107361: | Length = 567 Score = 27.7 bits (60), Expect = 5.8 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 386 GIVLGLKNTGVLDQIIG*NNPSFSLHSCSASI 481 G++LG G+L +IG PSF++ C A I Sbjct: 127 GLILGAATWGILADVIG-RRPSFNITLCIAGI 157
>AK119971: | Length = 202 Score = 27.7 bits (60), Expect = 5.8 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 354 ASVSASVKPAGSPVCSPDSRASSLSPAVAFLFADGAS 244 A+V ++ AG+P+ PD+ A + S AVA + AS Sbjct: 78 AAVESTCSAAGAPISIPDASAPAASSAVASATSAAAS 114
>AK099541:Os05g0463700 | Length = 275 Score = 27.3 bits (59), Expect = 7.5 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 356 CGAVGHIMGVGIVLGLKNTGVLDQIIG 436 CG + I+G G ++ L N G+L +IIG Sbjct: 194 CGILCRIIGCGFLIWLFNGGILYRIIG 220
>AK070600:Os02g0143200 | Length = 1035 Score = 26.9 bits (58), Expect = 9.8 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -3 Query: 547 IHIHSHDQITKGALVDPLDGAPDGCRTAMEGKGRVILADDLVE 419 +HI S DQ T L LDG P + +G+ + ADD+ + Sbjct: 975 VHISSDDQNTNPFLQQSLDGYP---KYVADGEALQVAADDVFQ 1014 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,134,476 Number of extensions: 218226 Number of successful extensions: 815 Number of sequences better than 10.0: 15 Number of HSP's gapped: 813 Number of HSP's successfully gapped: 16 Length of query: 195 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 100 Effective length of database: 11,595,960 Effective search space: 1159596000 Effective search space used: 1159596000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
