ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf13e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120425:Os02g0189000 179 2e-45
2AK110693:Os08g0121800 70 2e-12
3AK111455:Os07g0471200 36 0.035
4AK110623: 30 1.9
5Os07g0604700:Os07g0604700 29 3.2
6AK110454: 29 3.2
7Os10g0150300:Os10g0150300 29 4.2
8Os05g0121600:Os05g0121600 29 4.2
9AK110287: 29 4.2
10AK121421:Os07g0281200 29 4.2
11AK111205: 28 5.5
12AK073886:Os01g0814000 28 5.5
13AK109135: 28 7.2
14AK058817:Os10g0363300 28 7.2
15AK107980:Os06g0681200 28 9.4
16AK100360:Os12g0203000 28 9.4

>AK120425:Os02g0189000 |
          Length = 146
 Score =  179 bits (454), Expect = 2e-45
 Identities = 94/144 (65%), Positives = 110/144 (76%), Gaps = 3/144 (2%)
 Frame = +1

Query: 97  AAPTGTSMLSALLQLPLAPFSGKSSAP--SAVHMTARRTPTPVLAA-KGYNVQIVVDENE 267
           AAP  TS+LSALLQLPLAPFSG+ S P  S VH+   R+PT  +AA KGYNVQIVVDENE
Sbjct: 3   AAPATTSLLSALLQLPLAPFSGRRSPPPPSVVHVAPPRSPTAAVAATKGYNVQIVVDENE 62

Query: 268 GEDSIFRRFRREVMKAGLLQEIKRRRRHENTKDKKIRKAREAGXXXXXXXXXXXXXFPED 447
           GE+SIFRRFRREVM+AG+LQEIKRRRR+E+ KD++ RKAREAG             FPED
Sbjct: 63  GEESIFRRFRREVMRAGVLQEIKRRRRYESKKDERKRKAREAGRRNRRRRMMEEPRFPED 122

Query: 448 EGDSEAVRTRRDEDNDNWEVSGIL 519
           + DSEA R  RD++ DNWE+ GIL
Sbjct: 123 DADSEAARRARDDEKDNWEIDGIL 146



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>AK110693:Os08g0121800 |
          Length = 160

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
 Frame = +1

Query: 85  ATA-MAAPTGTSMLSALLQLPLAPFSGKSSAPSAVHMTARRTPTPVLAA---KGYNVQIV 252
           ATA + +P   S+L A  +     F  + S P+   ++A   P P   +   K +N ++ 
Sbjct: 9   ATAGIISPPTPSLLWANTRATFVSFP-RRSPPTTSLLSASSAPAPAPPSANPKYHNAKVN 67

Query: 253 V-DENEGEDSIFRRFRREVMKAGLLQEIKRRRRHENTKDKKIRKAREAGXXXXXXXXXXX 429
             DE    + + +RFRREV +AG+++EI+ RRRHE+ +DK+ RKAR A            
Sbjct: 68  AGDEEVDGEELLQRFRREVARAGVMEEIRWRRRHEDARDKRKRKARSAARRFRRRHFKGP 127

Query: 430 XXFPEDEGDSEAVRTRRDEDNDNWEVSG 513
             F +++   E +    D+ +DNWE+ G
Sbjct: 128 YPFGDEQEPKEGI--MEDDKHDNWELPG 153



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>AK111455:Os07g0471200 |
          Length = 267

 Score = 35.8 bits (81), Expect = 0.035
 Identities = 32/113 (28%), Positives = 46/113 (40%)
 Frame = +1

Query: 10  PLPFPASSKTRNSESAATVRAD*SKATAMAAPTGTSMLSALLQLPLAPFSGKSSAPSAVH 189
           P P  +SS T  + S+A VR   S  T   APT  + + ++L  P      +   P+A  
Sbjct: 86  PTPLASSSSTTTT-SSAIVRRPTSTTTTAIAPTAAARVRSVLTAPTTT-RVRRPVPAAPA 143

Query: 190 MTARRTPTPVLAAKGYNVQIVVDENEGEDSIFRRFRREVMKAGLLQEIKRRRR 348
             A     P        V +V+  +    S  R   RE  + G+    KRRRR
Sbjct: 144 AAAAAASVPAGLLLLLLVALVLASSSARHSDRRPPLRETRRRGIKPNAKRRRR 196



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>AK110623: |
          Length = 204

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 22/65 (33%), Positives = 37/65 (56%)
 Frame = +1

Query: 25  ASSKTRNSESAATVRAD*SKATAMAAPTGTSMLSALLQLPLAPFSGKSSAPSAVHMTARR 204
           ASS   +S +AA+ +A  + A + +A   TS++S++        S  SSA S+V  +A+ 
Sbjct: 99  ASSAAPSSAAAASSQASSAAAPSSSAAAATSVISSVA-------SAASSAVSSVISSAKG 151

Query: 205 TPTPV 219
           + TPV
Sbjct: 152 SVTPV 156



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>Os07g0604700:Os07g0604700 |
          Length = 95

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 24  SLIQNPELR-ERSNRQSRLVEGHSHGRPYRHFHVERPAPASPGSVLGEELRAFGGPHDRP 200
           ++  NP++R  +S+RQS ++E    G  Y H    R        V     R F GP   P
Sbjct: 30  NVFMNPDVRVNKSHRQSAVLENADEGEKYHHHAFRRFLGTQRPEVFPAINRFFAGPATVP 89



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>AK110454: |
          Length = 1074

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +1

Query: 58   ATVRAD*SKATAMAAPTGTSMLSALLQLPLAPFSGKSSAPSAVHMTARRTPTPVLAAKGY 237
            AT+    S +  +    G    +A  Q PLAPF   S + + +H+ A  TP+P  + +  
Sbjct: 871  ATIEELGSSSIGVRTSNGRISFAARHQSPLAPFHLSSQSITKIHIPA-PTPSPQPSTRRV 929

Query: 238  NVQIVVDENEGE 273
                 V E E E
Sbjct: 930  PTTTAVKEKEKE 941



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>Os10g0150300:Os10g0150300 |
          Length = 196

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 105 YRHFHVERPAPASPGSVLGEELRAFGGPH-DRPPH 206
           + HFH  +PAPA+P +      +    PH D+PPH
Sbjct: 149 FDHFHHNKPAPAAPST------KPAPKPHPDQPPH 177



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>Os05g0121600:Os05g0121600 |
          Length = 519

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 10  PLPFPASSKTRNSESAATVRAD*SKATAMAAPTGTSMLSALLQL-PLAPFSGKSS 171
           PLPF +SS +  S S+A   +  SKA   AA    +  +A L+  P AP S  SS
Sbjct: 462 PLPFFSSSSSSPSSSSAAASSGFSKAATTAA---AAQHTATLRFDPTAPSSSSSS 513



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>AK110287: |
          Length = 856

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 18/83 (21%), Positives = 32/83 (38%)
 Frame = +1

Query: 7   SPLPFPASSKTRNSESAATVRAD*SKATAMAAPTGTSMLSALLQLPLAPFSGKSSAPSAV 186
           +P   P +  T  + + + V    +K     AP    +     + P  P    ++AP+  
Sbjct: 266 APAVAPTTQPTAAANTTSPVPNRAAKNAPSKAPPKARVQPPAYRPPTEPAPAPTAAPTPA 325

Query: 187 HMTARRTPTPVLAAKGYNVQIVV 255
             TA + PTP +  K     + V
Sbjct: 326 QPTATQQPTPAVVVKAEPTPVAV 348



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>AK121421:Os07g0281200 |
          Length = 116

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 82  KATAMAAPTGTSMLSALLQLPLAPFSGKSSAPSAVHMTARRTPTPVLAA 228
           +A  + +P GT+M     +LP       ++ PS+   TA  TPT +LAA
Sbjct: 62  EAAPLGSPIGTTMTEPEPELPA------NAPPSSAGATASSTPTTLLAA 104



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>AK111205: |
          Length = 777

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 17/92 (18%)
 Frame = +1

Query: 4   LSPLPFPASSKTRNSESAATVRAD*SKATAMAA-------------PTGTSMLSALLQ-- 138
           L+PLP PA   T  + +AA  +   S A A AA             P  T +L+  ++  
Sbjct: 475 LAPLPLPAGGTTAPTNTAAGSQVAASAAAAAAAAAAVPAVMSSPPRPGHTRVLTVRIEPA 534

Query: 139 LPLAPFSGKSSAPSAVHM--TARRTPTPVLAA 228
              AP    ++AP+  H   +A    TP  AA
Sbjct: 535 ATQAPMPLTAAAPATAHTNGSAANAVTPTAAA 566



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>AK073886:Os01g0814000 |
          Length = 533

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +3

Query: 315 RPAPGDQAPPPAREHQG 365
           RP PGD APPP   H G
Sbjct: 16  RPRPGDPAPPPLPMHPG 32



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>AK109135: |
          Length = 294

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +1

Query: 103 PTGTSMLSALLQLPLAPFSGKSSAPSAVHMTARRTPTPVLAAKGYNVQIVVDENEGEDSI 282
           PT +S+ + ++  P+     + S P  V    + TPTPV       VQ V D N+G+ S 
Sbjct: 154 PTASSVTTPVVAQPVPQ---QLSTP--VIEPVKPTPTPVTPLATNKVQPVSDTNKGQLSP 208

Query: 283 FRRFRREVMKAGL 321
             +++ E+ K  L
Sbjct: 209 RAKYKLEIEKQRL 221



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>AK058817:Os10g0363300 |
          Length = 244

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 23/77 (29%), Positives = 41/77 (53%)
 Frame = +1

Query: 106 TGTSMLSALLQLPLAPFSGKSSAPSAVHMTARRTPTPVLAAKGYNVQIVVDENEGEDSIF 285
           T  S+++ + QL +  ++  ++  + +H T+ R     +AAKG  +  VVD  E     +
Sbjct: 70  TRRSIIARMKQL-MPIYTQVATRFAELHDTSAR-----MAAKGV-IGKVVDWEESRSFFY 122

Query: 286 RRFRREVMKAGLLQEIK 336
           RR RR V +  L +EI+
Sbjct: 123 RRLRRRVTEDALAKEIR 139



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>AK107980:Os06g0681200 |
          Length = 279

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +1

Query: 10  PLPFPASSKTRNSESAATVRAD*SKATAMAAPTGTSMLSALLQLPLAPFSGKSSAPSAVH 189
           P+P PASS    + +AAT     + +     P+ +  +S +   P    S  SS P+   
Sbjct: 156 PMPSPASSPPSPAPAAATPSL--APSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAA 213

Query: 190 MTARRTPTP 216
           M    + TP
Sbjct: 214 MAPSPSTTP 222



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>AK100360:Os12g0203000 |
          Length = 422

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 48  RERSNRQSRLVEGHSHGRPYRHFHVERPAPASPGSV 155
           R   N+   + +G +HGR YR  H   P     G+V
Sbjct: 362 RHDENKNPEVKDGMNHGRKYRRIHHSGPLMPPGGNV 397


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,993,372
Number of extensions: 401506
Number of successful extensions: 2059
Number of sequences better than 10.0: 16
Number of HSP's gapped: 2055
Number of HSP's successfully gapped: 16
Length of query: 263
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 164
Effective length of database: 11,435,796
Effective search space: 1875470544
Effective search space used: 1875470544
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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