ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf22a17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK067020:Os09g0281600 403 e-112
2Os06g0682700:Os06g0682700 42 0.002
3AK119874:Os02g0245000 40 0.009
4AK103574:Os06g0489200 37 0.098
5AK119770:Os02g0245000 35 0.28
6AK110575:Os02g0744800 32 2.4
7AK107830:Os02g0106600 31 4.1
8Os04g0326300:Os04g0326300 31 4.1
9Os04g0319600:Os04g0319600 31 4.1
10AK100466:Os01g0698100 31 5.4
11AK064088:Os04g0131900 31 5.4

>AK067020:Os09g0281600 |
          Length = 289
 Score =  403 bits (1036), Expect = e-112
 Identities = 205/293 (69%), Positives = 223/293 (76%)
 Frame = +3

Query: 1545 MTVRQVADKLASFVAKNGRQFEDITRQKNPGDSPFKFLFDKNCSDYKYYENRLAEEEKVH 1724
            MTV+QVADKLA+FVAKNGRQFE++TRQ+NPGD+PFKFLFDKNCSDYKYYE RLAEEE + 
Sbjct: 1    MTVKQVADKLANFVAKNGRQFENVTRQRNPGDTPFKFLFDKNCSDYKYYEFRLAEEEMLL 60

Query: 1725 AQTKDAHASKIVNSSTASSIAHTGPQRSSFEQRSNYQTPASALYGAYEXXXXXXXXXXXX 1904
            AQ+K+A ASK  +SST SS A + PQRSSFEQ++NYQTPASALYGAYE            
Sbjct: 61   AQSKEAQASKHASSSTPSSRAPSAPQRSSFEQKTNYQTPASALYGAYE----GSSSQGSS 116

Query: 1905 XXXXXAPSDPVALMEFYMKKAAQEERKRPPRQSKDEMPPPPCLVQGPPNKGHHMGDFIPQ 2084
                  P DPVALMEFYMKKAAQEERKRPP+QSKDEMPPPP L      KGHHMGDFIPQ
Sbjct: 117  SGYGEPPKDPVALMEFYMKKAAQEERKRPPKQSKDEMPPPPSLQAPSSKKGHHMGDFIPQ 176

Query: 2085 EELEKFMARCNDXXXXXXXXXXXXXXXXXXDNIGHKLLSKMXXXXXXXXXXXXXXXADPI 2264
            EELEKFMARCND                  DNIGHKLLSKM               ADPI
Sbjct: 177  EELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSERSGRADPI 236

Query: 2265 MAGDVKQDHLGVGAIQPGEVSSEDDIYEQYKKRMMLGYRHRPNPLNNPRKQYY 2423
            MAGDVK+DHLGVGA+QPGEV+SEDDIYEQYKKRMMLGYR+RPNPLNNPRK YY
Sbjct: 237  MAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 289



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>Os06g0682700:Os06g0682700 |
          Length = 627

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 19/58 (32%), Positives = 33/58 (56%)
 Frame = +3

Query: 1521 AASAPPNDMTVRQVADKLASFVAKNGRQFEDITRQKNPGDSPFKFLFDKNCSDYKYYE 1694
            AA+ PP+D  +++  DK+  ++AKNG +FE + R K   +  + F+F      Y  Y+
Sbjct: 98   AAAPPPSDPELQKRIDKVVEYIAKNGPEFEVVIRDKQHDNPDYAFIFGGEGHAYYRYK 155



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>AK119874:Os02g0245000 |
          Length = 792

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 22/59 (37%), Positives = 36/59 (61%)
 Frame = +3

Query: 1533 PPNDMTVRQVADKLASFVAKNGRQFEDITRQKNPGDSPFKFLFDKNCSDYKYYENRLAE 1709
            PP D  +R + +K A+FV+KNG +FE      N G++ F FL   +   + YY++R++E
Sbjct: 51   PPPD--IRVIIEKTATFVSKNGPEFERRIISHNAGNAKFNFL-QPSDPYHAYYQHRVSE 106



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>AK103574:Os06g0489200 |
          Length = 984

 Score = 36.6 bits (83), Expect = 0.098
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
 Frame = +3

Query: 1536 PNDMTVRQVADKLASFVAKNGRQFEDITRQKNPGDSPFKFLFD-KNCSDYKYYENRLAE- 1709
            P D ++R + +  A+ VA+ G+  ED  ++K+  ++ F FL +   CS   YY  +L E 
Sbjct: 400  PEDTSLRLLIEGCAAMVARCGKHIEDFYKEKSKTNTQFNFLNEGDGCS---YYARKLWEY 456

Query: 1710 -EEKVHAQTKDAHASKIVNSSTASS 1781
             ++ +  Q  D   SK  +  TA +
Sbjct: 457  QQKYIDQQKPDTVQSKSSDKLTAEN 481



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>AK119770:Os02g0245000 |
          Length = 733

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +3

Query: 1566 DKLASFVAKNGRQFEDITRQKNPGDSPFKFLFDKNCSDYKYYENRLAE 1709
            +K A+FV+KNG +FE      N G++ F FL   +   + YY++R++E
Sbjct: 1    EKTATFVSKNGPEFERRIISHNAGNAKFNFL-QPSDPYHAYYQHRVSE 47



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>AK110575:Os02g0744800 |
          Length = 123

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = +2

Query: 152 SDPAIRGMASPSMNFTPFF--ARQVSPKSGRSLLACR 256
           S PAI G+ASP M+ TPF+  +R ++P SG S   CR
Sbjct: 67  SCPAIHGIASPMMS-TPFWWSSRPMNPISGTSSRTCR 102



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>AK107830:Os02g0106600 |
          Length = 188

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 1965 AAQEERKRPPRQSKDEMPPPPCLV 2036
            AA E+ ++PP Q  D  PPPP LV
Sbjct: 88   AAAEDPEKPPVQEADPPPPPPALV 111



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>Os04g0326300:Os04g0326300 |
          Length = 283

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -1

Query: 2481 AAKLVFLRLPSPWLTSPCINSIVSLGCSVGLAYGGSLASFASCI 2350
            AA  VFL LP PWL  P   ++        L   G L SF+ CI
Sbjct: 195  AADAVFLDLPQPWLAIPSAGTM--------LKQDGVLCSFSPCI 230



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>Os04g0319600:Os04g0319600 |
          Length = 279

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -1

Query: 2481 AAKLVFLRLPSPWLTSPCINSIVSLGCSVGLAYGGSLASFASCI 2350
            AA  VFL LP PWL  P   ++        L   G L SF+ CI
Sbjct: 196  AADAVFLDLPQPWLAIPSAGTM--------LKQDGVLCSFSPCI 231



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>AK100466:Os01g0698100 |
          Length = 900

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 24/91 (26%), Positives = 40/91 (43%)
 Frame = +3

Query: 1551 VRQVADKLASFVAKNGRQFEDITRQKNPGDSPFKFLFDKNCSDYKYYENRLAEEEKVHAQ 1730
            +++  +K+  F+ +NG++FE    +++     F FL   N   Y  Y  +L EE     Q
Sbjct: 380  LKRTMEKIVEFIIRNGKEFEGKLIEQDRTTGRFPFLLPSN--PYHPYYLKLLEE----TQ 433

Query: 1731 TKDAHASKIVNSSTASSIAHTGPQRSSFEQR 1823
               +           SS  H   +RSS EQ+
Sbjct: 434  ESKSRGGSSEPKDRKSSSEHK-DRRSSSEQK 463



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>AK064088:Os04g0131900 |
          Length = 609

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 1620 RQKNPGDSPFKFLFDKNCSDYKYYE--NRLAEEEKVHAQTKDAHASKIVNSSTASSIAHT 1793
            RQ NP D P K LFD   S  K  E  NR+A  +       D  +S  + +ST   +A+ 
Sbjct: 84   RQNNPADDPTKQLFDDKISLKKKLEMLNRIATVKDDGTVVVDVPSS--LETSTTDGVAYD 141

Query: 1794 G 1796
            G
Sbjct: 142  G 142


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 75,458,449
Number of extensions: 1683801
Number of successful extensions: 5263
Number of sequences better than 10.0: 11
Number of HSP's gapped: 5225
Number of HSP's successfully gapped: 11
Length of query: 934
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 824
Effective length of database: 10,995,345
Effective search space: 9060164280
Effective search space used: 9060164280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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