ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf22a17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018559.1| Zea mays clone EL01N0440E03.d mRNA sequence Length = 1432 Score = 611 bits (308), Expect = e-171 Identities = 549/625 (87%), Gaps = 7/625 (1%) Strand = Plus / Plus Query: 1803 agaagctcatttgaacaaagatctaactatcagacacctgcttctgctttatatggtgca 1862 ||||||||||||||||| | |||||||||||||||||||| || ||||| || || ||| Sbjct: 505 agaagctcatttgaacagaagtctaactatcagacacctgcatcagctttgtacggggca 564 Query: 1863 tatgaaggtagttcttcccagggaagctcatctagccatggtggtcagagcatgtctgca 1922 ||||| |||||||||||||||| |||||| ||||| | |||| ||| | || || || Sbjct: 565 tatgagggtagttcttcccagg-aagctcttctagttacggtgatcata-cagctc--ca 620 Query: 1923 ccctcagatccagtagcattgatggaattctacatgaagaaagctgcgcaggaagaacgg 1982 || |||||||| |||||||||||||||||||| ||||| ||||| | |||||||||| Sbjct: 621 ccatcagatcctgtagcattgatggaattctatgcaaagaaggctgcactggaagaacgg 680 Query: 1983 aagagaccaccaaggcagtcaaaagatgaaatgccaccacctccatgtcttgttcagggt 2042 ||||| |||||||||||||| |||||||||||||| |||||||| | |||| || ||| Sbjct: 681 aagaggccaccaaggcagtcgaaagatgaaatgccgccacctccttctctt---caaggt 737 Query: 2043 cctcctaacaagggacaccacatgggggacttcattcctcaagaagaacttgagaagttc 2102 |||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 738 cctcctaagaagggacaccacatgggtgatttcattcctcaagaagaacttgaaaagttt 797 Query: 2103 atggcacgctgtaacgatgctgcagcacaaaaggctaccaaagaagctgcggagaaggct 2162 |||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 798 atggcacggtgtaatgatgctgcagcacaaaaggctaccaaagaagccgctgagaaggct 857 Query: 2163 aagattcaggccgacaatattgggcacaagcttctctctaagatgggctggagggaaggt 2222 ||||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||| Sbjct: 858 aagattcaggcggacaatattgggcacaaacttttatctaagatgggttggagggaaggc 917 Query: 2223 gagggtcttggcagtgagagaagtggccgtgcagatcccattatggctggagatgtgaag 2282 ||||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 918 gagggtcttgggagcgagagaagaggccgtgcagatcccgttatggctggagatgtgaag 977 Query: 2283 caggatcaccttggtgttggtgctatccaacctggtgaggtgtcatctgaagatgacatc 2342 ||||||| ||||||||||| ||| |||| ||||||||||| ||||||||||||||||| Sbjct: 978 aaggatcatcttggtgttggggctgtccagcctggtgaggtcacatctgaagatgacatc 1037 Query: 2343 tacgagcaatacaagaagcgaatgatgctaggctaccgccataggccaaacccactgaac 2402 || |||||||||||||| || |||||||| || |||||| ||||||||||||| |||||| Sbjct: 1038 tatgagcaatacaagaaacggatgatgcttggataccgctataggccaaaccctctgaac 1097 Query: 2403 aacccaaggaaacaatactattgat 2427 || ||||||||| |||||| |||| Sbjct: 1098 aatccaaggaaatcatactactgat 1122 Score = 234 bits (118), Expect = 1e-57 Identities = 184/206 (89%) Strand = Plus / Plus Query: 1533 ccaccaaatgatatgacagtgaggcaggttgctgacaaattagcaagcttcgttgccaaa 1592 ||||||||||||||||||||||| || || ||||||||| | |||||||| ||||||||| Sbjct: 238 ccaccaaatgatatgacagtgagacaagtcgctgacaaactggcaagctttgttgccaaa 297 Query: 1593 aatgggaggcagtttgaggatatcacacggcagaagaatcctggagattcaccattcaag 1652 || ||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 298 aacgggagacagtttgagaatatcacacggcagaggaatcctggagatacaccattcaag 357 Query: 1653 tttctatttgataagaactgttcagactacaaatattatgagaatcggcttgctgaagag 1712 ||||||||||| || ||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 358 tttctatttgacaaacactgtccagactacaaatattatgagtttcagcttgctgaagag 417 Query: 1713 gaaaaggttcatgctcagacaaagga 1738 |||| || || ||||||| ||||||| Sbjct: 418 gaaagggctcttgctcagtcaaagga 443
>ref|NM_001069303.1| Oryza sativa (japonica cultivar-group) Os09g0281600 (Os09g0281600) mRNA, complete cds Length = 2700 Score = 597 bits (301), Expect = e-167 Identities = 470/525 (89%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 1929 gatccagtagcattgatggaattctacatgaagaaagctgcgcaggaagaacggaagaga 1988 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 1865 gatccagtagcattgatggaattctacatgaagaaagctgcacaggaagaacggaaaagg 1924 Query: 1989 ccaccaaggcagtcaaaagatgaaatgccaccacctccatgtcttgttcagggtcctcct 2048 ||||| | || |||||||||||||||||||||||||| | |||| || | |||| || Sbjct: 1925 ccaccgaaacaatcaaaagatgaaatgccaccacctccttctctt---caagctccttct 1981 Query: 2049 ---aacaagggacaccacatgggggacttcattcctcaagaagaacttgagaagttcatg 2105 || |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 1982 tccaagaagggacatcacatgggcgacttcattcctcaagaagaacttgaaaagtttatg 2041 Query: 2106 gcacgctgtaacgatgctgcagcacaaaaggctaccaaagaagctgcggagaaggctaag 2165 ||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 2042 gcacgttgtaacgatgctgctgcacaaaaagctaccaaagaagctgcagagaaggctaag 2101 Query: 2166 attcaggccgacaatattgggcacaagcttctctctaagatgggctggagggaaggtgag 2225 |||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 2102 attcaggctgacaatatcggacacaaacttctgtctaagatgggatggagggaaggtgag 2161 Query: 2226 ggtcttggcagtgagagaagtggccgtgcagatcccattatggctggagatgtgaagcag 2285 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 2162 ggtcttggcagtgagagaagtggacgtgcagatcccattatggctggagacgtgaagaaa 2221 Query: 2286 gatcaccttggtgttggtgctatccaacctggtgaggtgtcatctgaagatgacatctac 2345 || || ||||||||||| ||| |||||||||||||||| ||||||||||||| ||||| Sbjct: 2222 gaccatcttggtgttggcgctgtccaacctggtgaggtcacatctgaagatgatatctat 2281 Query: 2346 gagcaatacaagaagcgaatgatgctaggctaccgccataggccaaacccactgaacaac 2405 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 2282 gagcaatacaagaagcgaatgatgcttggctaccgttataggccaaacccactgaacaat 2341 Query: 2406 ccaaggaaacaatactattgatacaaggggaggtcagccaagggg 2450 ||||||||| |||||| ||||| || ||||||||| |||||||| Sbjct: 2342 ccaaggaaagcatactactgatataatgggaggtcatccaagggg 2386 Score = 424 bits (214), Expect = e-115 Identities = 460/538 (85%), Gaps = 8/538 (1%) Strand = Plus / Plus Query: 1370 tttttcttatggctgcagcttatagatta-ctatatcgacatggctgggaaggatgttga 1428 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||||||||| Sbjct: 1322 tttttcttctgactgcagcttatagattaactgtatcgacattgatgggaaggatgttga 1381 Query: 1429 ttgaaagggttggaaatgtggcgttactgctgctgcagtaatttgcattcccttgttcat 1488 ||||||| |||||| || |||||||| | ||||||||||||||||| |||||||| Sbjct: 1382 ttgaaagagttggat-----gcattactgctacagcagtaatttgcattcc-ttgttcat 1435 Query: 1489 gcacttgatattaatgagttctt-aagtgacatgcagcctcagcaccaccaaatgatatg 1547 || |||||||||||| |||| || ||||||||||||||| || ||||||||||||||||| Sbjct: 1436 gcgcttgatattaatcagttatttaagtgacatgcagccccatcaccaccaaatgatatg 1495 Query: 1548 acagtgaggcaggttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagttt 1607 || |||| ||| ||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 1496 actgtgaagcaagttgctgacaaattagcaaattttgttgccaaaaatgggagacagttt 1555 Query: 1608 gaggatatcacacggcagaagaatcctggagattcaccattcaagtttctatttgataag 1667 ||| || |||| || || | ||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1556 gagaatgtcacgcgtcaaaggaatcctggagatacaccattcaagtttctgtttgataag 1615 Query: 1668 aactgttcagactacaaatattatgagaatcggcttgctgaagaggaaaaggttcatgct 1727 |||||||||||||||||||| |||||| ||||||||||||||| |||| | | | |||| Sbjct: 1616 aactgttcagactacaaatactatgagtttcggcttgctgaagaagaaatgttacttgct 1675 Query: 1728 cagacaaaggatgctcatgcttcaaaaattgttaattcgagcactgcaagctccatagca 1787 ||| ||||||| || || || |||||| || || || |||||| ||||||||| |||| Sbjct: 1676 cagtcaaaggaggcccaggcatcaaaacatgctagctcaagcactccaagctccagagca 1735 Query: 1788 catactggtccgcaaagaagctcatttgaacaaagatctaactatcagacacctgcttct 1847 | | || || || ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 1736 ccaagtgccccacagagaagctcatttgaacaaaagactaattatcaaacacctgcttca 1795 Query: 1848 gctttatatggtgcatatgaaggtagttcttcccagggaagctcatctagccatggtg 1905 ||||| ||||| |||||||| |||||||||||||| |||||||||||| || |||||| Sbjct: 1796 gctttgtatggggcatatgagggtagttcttcccaaggaagctcatctggctatggtg 1853 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 2421 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 2480 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 2481 agagaagccaagaagttcatttattcagca 2510 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 464 aagggcctcttcgccaacgacggctccttcatggagagattcaagcagatgcag 517 ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 377 aagggactcttcgccaacgacggctccttcatggagcggttcaagcagatgcag 430 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 649 cgaggtcaagaaggccggctcggtcttgtcgggcgggaagctggcctttagcctgaagaa 708 |||||| ||||||||||| ||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 565 cgaggtgaagaaggccggttcgatctcgtcgggcgccaagctcgcctttagcctcaagaa 624 Query: 709 gaa 711 ||| Sbjct: 625 gaa 627
>dbj|AK067020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092I17, full insert sequence Length = 2706 Score = 597 bits (301), Expect = e-167 Identities = 470/525 (89%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 1929 gatccagtagcattgatggaattctacatgaagaaagctgcgcaggaagaacggaagaga 1988 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 1869 gatccagtagcattgatggaattctacatgaagaaagctgcacaggaagaacggaaaagg 1928 Query: 1989 ccaccaaggcagtcaaaagatgaaatgccaccacctccatgtcttgttcagggtcctcct 2048 ||||| | || |||||||||||||||||||||||||| | |||| || | |||| || Sbjct: 1929 ccaccgaaacaatcaaaagatgaaatgccaccacctccttctctt---caagctccttct 1985 Query: 2049 ---aacaagggacaccacatgggggacttcattcctcaagaagaacttgagaagttcatg 2105 || |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 1986 tccaagaagggacatcacatgggcgacttcattcctcaagaagaacttgaaaagtttatg 2045 Query: 2106 gcacgctgtaacgatgctgcagcacaaaaggctaccaaagaagctgcggagaaggctaag 2165 ||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 2046 gcacgttgtaacgatgctgctgcacaaaaagctaccaaagaagctgcagagaaggctaag 2105 Query: 2166 attcaggccgacaatattgggcacaagcttctctctaagatgggctggagggaaggtgag 2225 |||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 2106 attcaggctgacaatatcggacacaaacttctgtctaagatgggatggagggaaggtgag 2165 Query: 2226 ggtcttggcagtgagagaagtggccgtgcagatcccattatggctggagatgtgaagcag 2285 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 2166 ggtcttggcagtgagagaagtggacgtgcagatcccattatggctggagacgtgaagaaa 2225 Query: 2286 gatcaccttggtgttggtgctatccaacctggtgaggtgtcatctgaagatgacatctac 2345 || || ||||||||||| ||| |||||||||||||||| ||||||||||||| ||||| Sbjct: 2226 gaccatcttggtgttggcgctgtccaacctggtgaggtcacatctgaagatgatatctat 2285 Query: 2346 gagcaatacaagaagcgaatgatgctaggctaccgccataggccaaacccactgaacaac 2405 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 2286 gagcaatacaagaagcgaatgatgcttggctaccgttataggccaaacccactgaacaat 2345 Query: 2406 ccaaggaaacaatactattgatacaaggggaggtcagccaagggg 2450 ||||||||| |||||| ||||| || ||||||||| |||||||| Sbjct: 2346 ccaaggaaagcatactactgatataatgggaggtcatccaagggg 2390 Score = 424 bits (214), Expect = e-115 Identities = 460/538 (85%), Gaps = 8/538 (1%) Strand = Plus / Plus Query: 1370 tttttcttatggctgcagcttatagatta-ctatatcgacatggctgggaaggatgttga 1428 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||||||||| Sbjct: 1326 tttttcttctgactgcagcttatagattaactgtatcgacattgatgggaaggatgttga 1385 Query: 1429 ttgaaagggttggaaatgtggcgttactgctgctgcagtaatttgcattcccttgttcat 1488 ||||||| |||||| || |||||||| | ||||||||||||||||| |||||||| Sbjct: 1386 ttgaaagagttggat-----gcattactgctacagcagtaatttgcattcc-ttgttcat 1439 Query: 1489 gcacttgatattaatgagttctt-aagtgacatgcagcctcagcaccaccaaatgatatg 1547 || |||||||||||| |||| || ||||||||||||||| || ||||||||||||||||| Sbjct: 1440 gcgcttgatattaatcagttatttaagtgacatgcagccccatcaccaccaaatgatatg 1499 Query: 1548 acagtgaggcaggttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagttt 1607 || |||| ||| ||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 1500 actgtgaagcaagttgctgacaaattagcaaattttgttgccaaaaatgggagacagttt 1559 Query: 1608 gaggatatcacacggcagaagaatcctggagattcaccattcaagtttctatttgataag 1667 ||| || |||| || || | ||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1560 gagaatgtcacgcgtcaaaggaatcctggagatacaccattcaagtttctgtttgataag 1619 Query: 1668 aactgttcagactacaaatattatgagaatcggcttgctgaagaggaaaaggttcatgct 1727 |||||||||||||||||||| |||||| ||||||||||||||| |||| | | | |||| Sbjct: 1620 aactgttcagactacaaatactatgagtttcggcttgctgaagaagaaatgttacttgct 1679 Query: 1728 cagacaaaggatgctcatgcttcaaaaattgttaattcgagcactgcaagctccatagca 1787 ||| ||||||| || || || |||||| || || || |||||| ||||||||| |||| Sbjct: 1680 cagtcaaaggaggcccaggcatcaaaacatgctagctcaagcactccaagctccagagca 1739 Query: 1788 catactggtccgcaaagaagctcatttgaacaaagatctaactatcagacacctgcttct 1847 | | || || || ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 1740 ccaagtgccccacagagaagctcatttgaacaaaagactaattatcaaacacctgcttca 1799 Query: 1848 gctttatatggtgcatatgaaggtagttcttcccagggaagctcatctagccatggtg 1905 ||||| ||||| |||||||| |||||||||||||| |||||||||||| || |||||| Sbjct: 1800 gctttgtatggggcatatgagggtagttcttcccaaggaagctcatctggctatggtg 1857 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 2425 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 2484 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 2485 agagaagccaagaagttcatttattcagca 2514 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 464 aagggcctcttcgccaacgacggctccttcatggagagattcaagcagatgcag 517 ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 381 aagggactcttcgccaacgacggctccttcatggagcggttcaagcagatgcag 434 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 649 cgaggtcaagaaggccggctcggtcttgtcgggcgggaagctggcctttagcctgaagaa 708 |||||| ||||||||||| ||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 569 cgaggtgaagaaggccggttcgatctcgtcgggcgccaagctcgcctttagcctcaagaa 628 Query: 709 gaa 711 ||| Sbjct: 629 gaa 631
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 250 bits (126), Expect = 2e-62 Identities = 249/286 (87%), Gaps = 8/286 (2%) Strand = Plus / Plus Query: 1370 tttttcttatggctgcagcttatagatta-ctatatcgacatggctgggaaggatgttga 1428 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||||||||| Sbjct: 5963560 tttttcttctgactgcagcttatagattaactgtatcgacattgatgggaaggatgttga 5963619 Query: 1429 ttgaaagggttggaaatgtggcgttactgctgctgcagtaatttgcattcccttgttcat 1488 ||||||| |||||| || |||||||| | ||||||||||||||||| |||||||| Sbjct: 5963620 ttgaaagagttggat-----gcattactgctacagcagtaatttgcattcc-ttgttcat 5963673 Query: 1489 gcacttgatattaatgagttctt-aagtgacatgcagcctcagcaccaccaaatgatatg 1547 || |||||||||||| |||| || ||||||||||||||| || ||||||||||||||||| Sbjct: 5963674 gcgcttgatattaatcagttatttaagtgacatgcagccccatcaccaccaaatgatatg 5963733 Query: 1548 acagtgaggcaggttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagttt 1607 || |||| ||| ||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 5963734 actgtgaagcaagttgctgacaaattagcaaattttgttgccaaaaatgggagacagttt 5963793 Query: 1608 gaggatatcacacggcagaagaatcctggagattcaccattcaagt 1653 ||| || |||| || || | ||||||||||||| |||||||||||| Sbjct: 5963794 gagaatgtcacgcgtcaaaggaatcctggagatacaccattcaagt 5963839 Score = 240 bits (121), Expect = 2e-59 Identities = 166/181 (91%) Strand = Plus / Plus Query: 2219 aggtgagggtcttggcagtgagagaagtggccgtgcagatcccattatggctggagatgt 2278 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 5965538 aggtgagggtcttggcagtgagagaagtggacgtgcagatcccattatggctggagacgt 5965597 Query: 2279 gaagcaggatcaccttggtgttggtgctatccaacctggtgaggtgtcatctgaagatga 2338 |||| | || || ||||||||||| ||| |||||||||||||||| ||||||||||||| Sbjct: 5965598 gaagaaagaccatcttggtgttggcgctgtccaacctggtgaggtcacatctgaagatga 5965657 Query: 2339 catctacgagcaatacaagaagcgaatgatgctaggctaccgccataggccaaacccact 2398 ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 5965658 tatctatgagcaatacaagaagcgaatgatgcttggctaccgttataggccaaacccact 5965717 Query: 2399 g 2399 | Sbjct: 5965718 g 5965718 Score = 228 bits (115), Expect = 9e-56 Identities = 157/171 (91%) Strand = Plus / Plus Query: 2052 aagggacaccacatgggggacttcattcctcaagaagaacttgagaagttcatggcacgc 2111 |||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 5964935 aagggacatcacatgggcgacttcattcctcaagaagaacttgaaaagtttatggcacgt 5964994 Query: 2112 tgtaacgatgctgcagcacaaaaggctaccaaagaagctgcggagaaggctaagattcag 2171 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 5964995 tgtaacgatgctgctgcacaaaaagctaccaaagaagctgcagagaaggctaagattcag 5965054 Query: 2172 gccgacaatattgggcacaagcttctctctaagatgggctggagggaaggt 2222 || |||||||| || ||||| ||||| ||||||||||| |||||||||||| Sbjct: 5965055 gctgacaatatcggacacaaacttctgtctaagatgggatggagggaaggt 5965105 Score = 139 bits (70), Expect = 6e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 1929 gatccagtagcattgatggaattctacatgaagaaagctgcgcaggaagaacggaagaga 1988 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 5964714 gatccagtagcattgatggaattctacatgaagaaagctgcacaggaagaacggaaaagg 5964773 Query: 1989 ccaccaaggcagtcaaaagatgaaatgccaccacctcc 2026 ||||| | || |||||||||||||||||||||||||| Sbjct: 5964774 ccaccgaaacaatcaaaagatgaaatgccaccacctcc 5964811 Score = 107 bits (54), Expect = 2e-19 Identities = 90/102 (88%) Strand = Plus / Plus Query: 1803 agaagctcatttgaacaaagatctaactatcagacacctgcttctgctttatatggtgca 1862 ||||||||||||||||||| |||| ||||| ||||||||||| ||||| ||||| ||| Sbjct: 5964229 agaagctcatttgaacaaaagactaattatcaaacacctgcttcagctttgtatggggca 5964288 Query: 1863 tatgaaggtagttcttcccagggaagctcatctagccatggt 1904 ||||| |||||||||||||| |||||||||||| || ||||| Sbjct: 5964289 tatgagggtagttcttcccaaggaagctcatctggctatggt 5964330 Score = 95.6 bits (48), Expect = 8e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 1647 ttcaagtttctatttgataagaactgttcagactacaaatattatgagaatcggcttgct 1706 |||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5963989 ttcaggtttctgtttgataagaactgttcagactacaaatactatgagtttcggcttgct 5964048 Query: 1707 gaagaggaaaaggttcatgctcagacaaagga 1738 ||||| |||| | | | ||||||| ||||||| Sbjct: 5964049 gaagaagaaatgttacttgctcagtcaaagga 5964080 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 5965882 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 5965941 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 5965942 agagaagccaagaagttcatttattcagca 5965971 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 464 aagggcctcttcgccaacgacggctccttcatggagagattcaagcagatgcag 517 ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 5962615 aagggactcttcgccaacgacggctccttcatggagcggttcaagcagatgcag 5962668 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 649 cgaggtcaagaaggccggctcggtcttgtcgggcgggaagctggcctttagcctgaagaa 708 |||||| ||||||||||| ||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 5962803 cgaggtgaagaaggccggttcgatctcgtcgggcgccaagctcgcctttagcctcaagaa 5962862 Query: 709 gaa 711 ||| Sbjct: 5962863 gaa 5962865
>gb|AC090054.2|AC090054 Oryza sativa chromosome 9 clone PAC0645D04, complete sequence Length = 139050 Score = 250 bits (126), Expect = 2e-62 Identities = 249/286 (87%), Gaps = 8/286 (2%) Strand = Plus / Plus Query: 1370 tttttcttatggctgcagcttatagatta-ctatatcgacatggctgggaaggatgttga 1428 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||||||||| Sbjct: 70720 tttttcttctgactgcagcttatagattaactgtatcgacattgatgggaaggatgttga 70779 Query: 1429 ttgaaagggttggaaatgtggcgttactgctgctgcagtaatttgcattcccttgttcat 1488 ||||||| |||||| || |||||||| | ||||||||||||||||| |||||||| Sbjct: 70780 ttgaaagagttggat-----gcattactgctacagcagtaatttgcattcc-ttgttcat 70833 Query: 1489 gcacttgatattaatgagttctt-aagtgacatgcagcctcagcaccaccaaatgatatg 1547 || |||||||||||| |||| || ||||||||||||||| || ||||||||||||||||| Sbjct: 70834 gcgcttgatattaatcagttatttaagtgacatgcagccccatcaccaccaaatgatatg 70893 Query: 1548 acagtgaggcaggttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagttt 1607 || |||| ||| ||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 70894 actgtgaagcaagttgctgacaaattagcaaattttgttgccaaaaatgggagacagttt 70953 Query: 1608 gaggatatcacacggcagaagaatcctggagattcaccattcaagt 1653 ||| || |||| || || | ||||||||||||| |||||||||||| Sbjct: 70954 gagaatgtcacgcgtcaaaggaatcctggagatacaccattcaagt 70999 Score = 240 bits (121), Expect = 2e-59 Identities = 166/181 (91%) Strand = Plus / Plus Query: 2219 aggtgagggtcttggcagtgagagaagtggccgtgcagatcccattatggctggagatgt 2278 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 72698 aggtgagggtcttggcagtgagagaagtggacgtgcagatcccattatggctggagacgt 72757 Query: 2279 gaagcaggatcaccttggtgttggtgctatccaacctggtgaggtgtcatctgaagatga 2338 |||| | || || ||||||||||| ||| |||||||||||||||| ||||||||||||| Sbjct: 72758 gaagaaagaccatcttggtgttggcgctgtccaacctggtgaggtcacatctgaagatga 72817 Query: 2339 catctacgagcaatacaagaagcgaatgatgctaggctaccgccataggccaaacccact 2398 ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 72818 tatctatgagcaatacaagaagcgaatgatgcttggctaccgttataggccaaacccact 72877 Query: 2399 g 2399 | Sbjct: 72878 g 72878 Score = 228 bits (115), Expect = 9e-56 Identities = 157/171 (91%) Strand = Plus / Plus Query: 2052 aagggacaccacatgggggacttcattcctcaagaagaacttgagaagttcatggcacgc 2111 |||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 72095 aagggacatcacatgggcgacttcattcctcaagaagaacttgaaaagtttatggcacgt 72154 Query: 2112 tgtaacgatgctgcagcacaaaaggctaccaaagaagctgcggagaaggctaagattcag 2171 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 72155 tgtaacgatgctgctgcacaaaaagctaccaaagaagctgcagagaaggctaagattcag 72214 Query: 2172 gccgacaatattgggcacaagcttctctctaagatgggctggagggaaggt 2222 || |||||||| || ||||| ||||| ||||||||||| |||||||||||| Sbjct: 72215 gctgacaatatcggacacaaacttctgtctaagatgggatggagggaaggt 72265 Score = 139 bits (70), Expect = 6e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 1929 gatccagtagcattgatggaattctacatgaagaaagctgcgcaggaagaacggaagaga 1988 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 71874 gatccagtagcattgatggaattctacatgaagaaagctgcacaggaagaacggaaaagg 71933 Query: 1989 ccaccaaggcagtcaaaagatgaaatgccaccacctcc 2026 ||||| | || |||||||||||||||||||||||||| Sbjct: 71934 ccaccgaaacaatcaaaagatgaaatgccaccacctcc 71971 Score = 107 bits (54), Expect = 2e-19 Identities = 90/102 (88%) Strand = Plus / Plus Query: 1803 agaagctcatttgaacaaagatctaactatcagacacctgcttctgctttatatggtgca 1862 ||||||||||||||||||| |||| ||||| ||||||||||| ||||| ||||| ||| Sbjct: 71389 agaagctcatttgaacaaaagactaattatcaaacacctgcttcagctttgtatggggca 71448 Query: 1863 tatgaaggtagttcttcccagggaagctcatctagccatggt 1904 ||||| |||||||||||||| |||||||||||| || ||||| Sbjct: 71449 tatgagggtagttcttcccaaggaagctcatctggctatggt 71490 Score = 95.6 bits (48), Expect = 8e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 1647 ttcaagtttctatttgataagaactgttcagactacaaatattatgagaatcggcttgct 1706 |||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 71149 ttcaggtttctgtttgataagaactgttcagactacaaatactatgagtttcggcttgct 71208 Query: 1707 gaagaggaaaaggttcatgctcagacaaagga 1738 ||||| |||| | | | ||||||| ||||||| Sbjct: 71209 gaagaagaaatgttacttgctcagtcaaagga 71240 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 73042 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 73101 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 73102 agagaagccaagaagttcatttattcagca 73131 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 464 aagggcctcttcgccaacgacggctccttcatggagagattcaagcagatgcag 517 ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 69775 aagggactcttcgccaacgacggctccttcatggagcggttcaagcagatgcag 69828 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 649 cgaggtcaagaaggccggctcggtcttgtcgggcgggaagctggcctttagcctgaagaa 708 |||||| ||||||||||| ||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 69963 cgaggtgaagaaggccggttcgatctcgtcgggcgccaagctcgcctttagcctcaagaa 70022 Query: 709 gaa 711 ||| Sbjct: 70023 gaa 70025
>dbj|AP006727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0645D04 Length = 142890 Score = 250 bits (126), Expect = 2e-62 Identities = 249/286 (87%), Gaps = 8/286 (2%) Strand = Plus / Plus Query: 1370 tttttcttatggctgcagcttatagatta-ctatatcgacatggctgggaaggatgttga 1428 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||||||||| Sbjct: 74491 tttttcttctgactgcagcttatagattaactgtatcgacattgatgggaaggatgttga 74550 Query: 1429 ttgaaagggttggaaatgtggcgttactgctgctgcagtaatttgcattcccttgttcat 1488 ||||||| |||||| || |||||||| | ||||||||||||||||| |||||||| Sbjct: 74551 ttgaaagagttggat-----gcattactgctacagcagtaatttgcattcc-ttgttcat 74604 Query: 1489 gcacttgatattaatgagttctt-aagtgacatgcagcctcagcaccaccaaatgatatg 1547 || |||||||||||| |||| || ||||||||||||||| || ||||||||||||||||| Sbjct: 74605 gcgcttgatattaatcagttatttaagtgacatgcagccccatcaccaccaaatgatatg 74664 Query: 1548 acagtgaggcaggttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagttt 1607 || |||| ||| ||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 74665 actgtgaagcaagttgctgacaaattagcaaattttgttgccaaaaatgggagacagttt 74724 Query: 1608 gaggatatcacacggcagaagaatcctggagattcaccattcaagt 1653 ||| || |||| || || | ||||||||||||| |||||||||||| Sbjct: 74725 gagaatgtcacgcgtcaaaggaatcctggagatacaccattcaagt 74770 Score = 240 bits (121), Expect = 2e-59 Identities = 166/181 (91%) Strand = Plus / Plus Query: 2219 aggtgagggtcttggcagtgagagaagtggccgtgcagatcccattatggctggagatgt 2278 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 76469 aggtgagggtcttggcagtgagagaagtggacgtgcagatcccattatggctggagacgt 76528 Query: 2279 gaagcaggatcaccttggtgttggtgctatccaacctggtgaggtgtcatctgaagatga 2338 |||| | || || ||||||||||| ||| |||||||||||||||| ||||||||||||| Sbjct: 76529 gaagaaagaccatcttggtgttggcgctgtccaacctggtgaggtcacatctgaagatga 76588 Query: 2339 catctacgagcaatacaagaagcgaatgatgctaggctaccgccataggccaaacccact 2398 ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 76589 tatctatgagcaatacaagaagcgaatgatgcttggctaccgttataggccaaacccact 76648 Query: 2399 g 2399 | Sbjct: 76649 g 76649 Score = 228 bits (115), Expect = 9e-56 Identities = 157/171 (91%) Strand = Plus / Plus Query: 2052 aagggacaccacatgggggacttcattcctcaagaagaacttgagaagttcatggcacgc 2111 |||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 75866 aagggacatcacatgggcgacttcattcctcaagaagaacttgaaaagtttatggcacgt 75925 Query: 2112 tgtaacgatgctgcagcacaaaaggctaccaaagaagctgcggagaaggctaagattcag 2171 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 75926 tgtaacgatgctgctgcacaaaaagctaccaaagaagctgcagagaaggctaagattcag 75985 Query: 2172 gccgacaatattgggcacaagcttctctctaagatgggctggagggaaggt 2222 || |||||||| || ||||| ||||| ||||||||||| |||||||||||| Sbjct: 75986 gctgacaatatcggacacaaacttctgtctaagatgggatggagggaaggt 76036 Score = 139 bits (70), Expect = 6e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 1929 gatccagtagcattgatggaattctacatgaagaaagctgcgcaggaagaacggaagaga 1988 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 75645 gatccagtagcattgatggaattctacatgaagaaagctgcacaggaagaacggaaaagg 75704 Query: 1989 ccaccaaggcagtcaaaagatgaaatgccaccacctcc 2026 ||||| | || |||||||||||||||||||||||||| Sbjct: 75705 ccaccgaaacaatcaaaagatgaaatgccaccacctcc 75742 Score = 107 bits (54), Expect = 2e-19 Identities = 90/102 (88%) Strand = Plus / Plus Query: 1803 agaagctcatttgaacaaagatctaactatcagacacctgcttctgctttatatggtgca 1862 ||||||||||||||||||| |||| ||||| ||||||||||| ||||| ||||| ||| Sbjct: 75160 agaagctcatttgaacaaaagactaattatcaaacacctgcttcagctttgtatggggca 75219 Query: 1863 tatgaaggtagttcttcccagggaagctcatctagccatggt 1904 ||||| |||||||||||||| |||||||||||| || ||||| Sbjct: 75220 tatgagggtagttcttcccaaggaagctcatctggctatggt 75261 Score = 95.6 bits (48), Expect = 8e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 1647 ttcaagtttctatttgataagaactgttcagactacaaatattatgagaatcggcttgct 1706 |||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 74920 ttcaggtttctgtttgataagaactgttcagactacaaatactatgagtttcggcttgct 74979 Query: 1707 gaagaggaaaaggttcatgctcagacaaagga 1738 ||||| |||| | | | ||||||| ||||||| Sbjct: 74980 gaagaagaaatgttacttgctcagtcaaagga 75011 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 76813 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 76872 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 76873 agagaagccaagaagttcatttattcagca 76902 Score = 83.8 bits (42), Expect = 3e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 464 aagggcctcttcgccaacgacggctccttcatggagagattcaagcagatgcag 517 ||||| |||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 73546 aagggactcttcgccaacgacggctccttcatggagcggttcaagcagatgcag 73599 Score = 61.9 bits (31), Expect = 1e-05 Identities = 55/63 (87%) Strand = Plus / Plus Query: 649 cgaggtcaagaaggccggctcggtcttgtcgggcgggaagctggcctttagcctgaagaa 708 |||||| ||||||||||| ||| ||| |||||||| ||||| ||||||||||| ||||| Sbjct: 73734 cgaggtgaagaaggccggttcgatctcgtcgggcgccaagctcgcctttagcctcaagaa 73793 Query: 709 gaa 711 ||| Sbjct: 73794 gaa 73796
>emb|CT828809.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN068L06, full insert sequence Length = 527 Score = 224 bits (113), Expect = 1e-54 Identities = 176/197 (89%) Strand = Plus / Plus Query: 2254 cagatcccattatggctggagatgtgaagcaggatcaccttggtgttggtgctatccaac 2313 |||||||||||||||||||||| |||||| | || || ||||||||||| ||| |||||| Sbjct: 1 cagatcccattatggctggagacgtgaagaaagaccatcttggtgttggcgctgtccaac 60 Query: 2314 ctggtgaggtgtcatctgaagatgacatctacgagcaatacaagaagcgaatgatgctag 2373 |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 61 ctggtgaggtcacatctgaagatgatatctatgagcaatacaagaagcgaatgatgcttg 120 Query: 2374 gctaccgccataggccaaacccactgaacaacccaaggaaacaatactattgatacaagg 2433 ||||||| |||||||||||||||||||||| ||||||||| |||||| ||||| || | Sbjct: 121 gctaccgttataggccaaacccactgaacaatccaaggaaagcatactactgatataatg 180 Query: 2434 ggaggtcagccaagggg 2450 |||||||| |||||||| Sbjct: 181 ggaggtcatccaagggg 197 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 232 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 291 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 292 agagaagccaagaagttcatttattcagca 321
>emb|CT828808.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA040L18, full insert sequence Length = 380 Score = 188 bits (95), Expect = 7e-44 Identities = 143/159 (89%) Strand = Plus / Plus Query: 2292 cttggtgttggtgctatccaacctggtgaggtgtcatctgaagatgacatctacgagcaa 2351 ||||||||||| ||| |||||||||||||||| ||||||||||||| ||||| |||||| Sbjct: 11 cttggtgttggcgctgtccaacctggtgaggtcacatctgaagatgatatctatgagcaa 70 Query: 2352 tacaagaagcgaatgatgctaggctaccgccataggccaaacccactgaacaacccaagg 2411 |||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 71 tacaagaagcgaatgatgcttggctaccgttataggccaaacccactgaacaatccaagg 130 Query: 2412 aaacaatactattgatacaaggggaggtcagccaagggg 2450 ||| |||||| ||||| || ||||||||| |||||||| Sbjct: 131 aaagcatactactgatataatgggaggtcatccaagggg 169 Score = 46.1 bits (23), Expect = 0.69 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2552 cagagaagcccagaagttgatttattcagca 2582 |||||||||| ||||||| |||||||||||| Sbjct: 174 cagagaagccaagaagttcatttattcagca 204
>dbj|AK062136.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F06, full insert sequence Length = 393 Score = 105 bits (53), Expect = 9e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 2358 aagcgaatgatgctaggctaccgccataggccaaacccactgaacaacccaaggaaacaa 2417 |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| | Sbjct: 1 aagcgaatgatgcttggctaccgttataggccaaacccactgaacaatccaaggaaagca 60 Query: 2418 tactattgatacaaggggaggtcagccaagggg 2450 ||||| ||||| || ||||||||| |||||||| Sbjct: 61 tactactgatataatgggaggtcatccaagggg 93 Score = 91.7 bits (46), Expect = 1e-14 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2494 acagaactaactgctgctttgggaaatgactaacagtattgaaagcttt-gttcatcagc 2552 |||||||||||| |||| | |||| || ||||||||||||||||| ||| ||||| |||| Sbjct: 128 acagaactaactactgcctagggatatcactaacagtattgaaagtttttgttcaccagc 187 Query: 2553 agagaagcccagaagttgatttattcagca 2582 ||||||||| ||||||| |||||||||||| Sbjct: 188 agagaagccaagaagttcatttattcagca 217
>dbj|AP006666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46L11, TM0365, complete sequence Length = 122449 Score = 81.8 bits (41), Expect = 1e-11 Identities = 104/125 (83%) Strand = Plus / Minus Query: 2256 gatcccattatggctggagatgtgaagcaggatcaccttggtgttggtgctatccaacct 2315 ||||| || ||||| ||| |||| ||| | |||||| | || || |||||| |||||||| Sbjct: 39345 gatcctatcatggcgggaaatgttaagaaagatcacttgggagtaggtgctgtccaacct 39286 Query: 2316 ggtgaggtgtcatctgaagatgacatctacgagcaatacaagaagcgaatgatgctaggc 2375 || |||||| | |||||||||||||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 39285 ggggaggtgacttctgaagatgacatatatgagcagtacaaaaagcgcatgatgcttggc 39226 Query: 2376 taccg 2380 ||||| Sbjct: 39225 taccg 39221 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Minus Query: 2085 gaagaacttgagaagttcatggcacgctgtaacgatgctgcagcaca 2131 ||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 39782 gaagaacttgagaagttcatggctagctgtaatgatgctggagcaca 39736 Score = 60.0 bits (30), Expect = 5e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 1560 gttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagtttgaggatatcaca 1619 |||||||||||| ||||||| || || || ||||| || ||||| ||||||||| | ||| Sbjct: 44611 gttgctgacaaactagcaagttttgtggcaaaaaacggaaggcaatttgaggatgttaca 44552 Query: 1620 cggcagaagaatcctggagattcaccattcaagt 1653 || || || |||||||| ||| |||| ||||||| Sbjct: 44551 cgccaaaaaaatcctggcgatacacctttcaagt 44518 Score = 52.0 bits (26), Expect = 0.011 Identities = 62/74 (83%) Strand = Plus / Minus Query: 1944 atggaattctacatgaagaaagctgcgcaggaagaacggaagagaccaccaaggcagtca 2003 ||||| |||||||||||||||||||| | ||||||| || | || ||| | ||||||| Sbjct: 40040 atggagttctacatgaagaaagctgcacgggaagaaaggtcaaaacaacctaagcagtca 39981 Query: 2004 aaagatgaaatgcc 2017 |||||||| ||||| Sbjct: 39980 aaagatgagatgcc 39967 Score = 52.0 bits (26), Expect = 0.011 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 1465 agtaatttgcattcccttgttcatgcacttgatattaatgagttct-taagtgacatgca 1523 |||||||| ||||||||||||||||| || | ||||||| |||| | ||||||| ||||| Sbjct: 44707 agtaatttccattcccttgttcatgctctcggtattaataagttttataagtgatatgca 44648 Query: 1524 gc 1525 || Sbjct: 44647 gc 44646
>ref|NM_115071.2| Arabidopsis thaliana RNA binding / nucleic acid binding (AT3G52120) mRNA, complete cds Length = 1691 Score = 65.9 bits (33), Expect = 7e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 1560 gttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagtttgaggatatcaca 1619 |||||||| ||| ||||||| || ||||| || |||| |||| |||||| | || ||| Sbjct: 551 gttgctgataaactagcaagttttgttgctaagcatggaaggccatttgagcacattaca 610 Query: 1620 cggcagaagaatcctggagattcaccattcaagtttctatttgataagaactgttcagac 1679 ||||| ||||||||||| ||| ||||||| || ||||| ||||| |||||||| | ||| Sbjct: 611 cggcaaaagaatcctggggatacaccatttaaatttctttttgacgagaactgtgcggac 670 Query: 1680 tacaa 1684 ||||| Sbjct: 671 tacaa 675 Score = 46.1 bits (23), Expect = 0.69 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2329 ctgaagatgacatctacgagcaatacaagaagcgaatgatgct 2371 |||| ||||| || |||||||| ||||||||||| |||||||| Sbjct: 1362 ctgaggatgatatatacgagcagtacaagaagcggatgatgct 1404
>gb|AY094004.1| Arabidopsis thaliana AT3g52120/F4F15_230 mRNA, complete cds Length = 1332 Score = 65.9 bits (33), Expect = 7e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 1560 gttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagtttgaggatatcaca 1619 |||||||| ||| ||||||| || ||||| || |||| |||| |||||| | || ||| Sbjct: 424 gttgctgataaactagcaagttttgttgctaagcatggaaggccatttgagcacattaca 483 Query: 1620 cggcagaagaatcctggagattcaccattcaagtttctatttgataagaactgttcagac 1679 ||||| ||||||||||| ||| ||||||| || ||||| ||||| |||||||| | ||| Sbjct: 484 cggcaaaagaatcctggggatacaccatttaaatttctttttgacgagaactgtgcggac 543 Query: 1680 tacaa 1684 ||||| Sbjct: 544 tacaa 548 Score = 46.1 bits (23), Expect = 0.69 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2329 ctgaagatgacatctacgagcaatacaagaagcgaatgatgct 2371 |||| ||||| || |||||||| ||||||||||| |||||||| Sbjct: 1235 ctgaggatgatatatacgagcagtacaagaagcggatgatgct 1277
>gb|AY037259.1| Arabidopsis thaliana AT3g52120/F4F15_230 mRNA, complete cds Length = 1652 Score = 65.9 bits (33), Expect = 7e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 1560 gttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagtttgaggatatcaca 1619 |||||||| ||| ||||||| || ||||| || |||| |||| |||||| | || ||| Sbjct: 539 gttgctgataaactagcaagttttgttgctaagcatggaaggccatttgagcacattaca 598 Query: 1620 cggcagaagaatcctggagattcaccattcaagtttctatttgataagaactgttcagac 1679 ||||| ||||||||||| ||| ||||||| || ||||| ||||| |||||||| | ||| Sbjct: 599 cggcaaaagaatcctggggatacaccatttaaatttctttttgacgagaactgtgcggac 658 Query: 1680 tacaa 1684 ||||| Sbjct: 659 tacaa 663 Score = 46.1 bits (23), Expect = 0.69 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2329 ctgaagatgacatctacgagcaatacaagaagcgaatgatgct 2371 |||| ||||| || |||||||| ||||||||||| |||||||| Sbjct: 1350 ctgaggatgatatatacgagcagtacaagaagcggatgatgct 1392
>emb|BX822893.1|CNS0A5XA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1568 Score = 65.9 bits (33), Expect = 7e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 1560 gttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagtttgaggatatcaca 1619 |||||||| ||| ||||||| || ||||| || |||| |||| |||||| | || ||| Sbjct: 494 gttgctgataaactagcaagttttgttgctaagcatggaaggccatttgagcacattaca 553 Query: 1620 cggcagaagaatcctggagattcaccattcaagtttctatttgataagaactgttcagac 1679 ||||| ||||||||||| ||| ||||||| || ||||| ||||| |||||||| | ||| Sbjct: 554 cggcaaaagaatcctggggatacaccatttaaatttctttttgacgagaactgtgcggac 613 Query: 1680 tacaa 1684 ||||| Sbjct: 614 tacaa 618 Score = 46.1 bits (23), Expect = 0.69 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2329 ctgaagatgacatctacgagcaatacaagaagcgaatgatgct 2371 |||| ||||| || |||||||| ||||||||||| |||||||| Sbjct: 1305 ctgaggatgatatatacgagcagtacaagaagcggatgatgct 1347
>gb|AF136643.1| Nuphar lutea GA dinucleotide repeat microsatellite sequence Length = 303 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Minus Query: 2329 ctgaagatgacatctacgagcaatacaagaagcgaatgatgct 2371 |||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 230 ctgatgatgacatctacgagcagtacaagaagcggatgatgct 188
>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15 Length = 123209 Score = 52.0 bits (26), Expect = 0.011 Identities = 77/94 (81%) Strand = Plus / Plus Query: 1560 gttgctgacaaattagcaagcttcgttgccaaaaatgggaggcagtttgaggatatcaca 1619 |||||||| ||| ||||||| || ||||| || |||| |||| |||||| | || ||| Sbjct: 79175 gttgctgataaactagcaagttttgttgctaagcatggaaggccatttgagcacattaca 79234 Query: 1620 cggcagaagaatcctggagattcaccattcaagt 1653 ||||| ||||||||||| ||| ||||||| |||| Sbjct: 79235 cggcaaaagaatcctggggatacaccatttaagt 79268 Score = 46.1 bits (23), Expect = 0.69 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2329 ctgaagatgacatctacgagcaatacaagaagcgaatgatgct 2371 |||| ||||| || |||||||| ||||||||||| |||||||| Sbjct: 80596 ctgaggatgatatatacgagcagtacaagaagcggatgatgct 80638
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 50.1 bits (25), Expect = 0.044 Identities = 28/29 (96%) Strand = Plus / Minus Query: 471 tcttcgccaacgacggctccttcatggag 499 ||||||||||||||||||| ||||||||| Sbjct: 19636234 tcttcgccaacgacggctcgttcatggag 19636206 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 272869 gaggaggacgatgatgatgatg 272890
>gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosome 8, complete sequence Length = 233354 Score = 50.1 bits (25), Expect = 0.044 Identities = 25/25 (100%) Strand = Plus / Minus Query: 69 caaattcctttctagggtttggttt 93 ||||||||||||||||||||||||| Sbjct: 68483 caaattcctttctagggtttggttt 68459
>ref|NM_167682.1| Drosophila melanogaster CG18809-RB, transcript variant B (CG18809), mRNA Length = 1453 Score = 50.1 bits (25), Expect = 0.044 Identities = 28/29 (96%) Strand = Plus / Plus Query: 471 tcttcgccaacgacggctccttcatggag 499 ||||||||||||||||||| ||||||||| Sbjct: 1032 tcttcgccaacgacggctcgttcatggag 1060
>ref|NM_167681.1| Drosophila melanogaster CG18809-RA, transcript variant A (CG18809), mRNA Length = 1466 Score = 50.1 bits (25), Expect = 0.044 Identities = 28/29 (96%) Strand = Plus / Plus Query: 471 tcttcgccaacgacggctccttcatggag 499 ||||||||||||||||||| ||||||||| Sbjct: 1045 tcttcgccaacgacggctcgttcatggag 1073
>gb|AY060308.1| Drosophila melanogaster GH15549 full length cDNA Length = 2922 Score = 50.1 bits (25), Expect = 0.044 Identities = 28/29 (96%) Strand = Plus / Plus Query: 471 tcttcgccaacgacggctccttcatggag 499 ||||||||||||||||||| ||||||||| Sbjct: 1240 tcttcgccaacgacggctcgttcatggag 1268
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 50.1 bits (25), Expect = 0.044 Identities = 28/29 (96%) Strand = Plus / Minus Query: 471 tcttcgccaacgacggctccttcatggag 499 ||||||||||||||||||| ||||||||| Sbjct: 139204 tcttcgccaacgacggctcgttcatggag 139176
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone BACR48P17, complete sequence Length = 176195 Score = 50.1 bits (25), Expect = 0.044 Identities = 28/29 (96%) Strand = Plus / Minus Query: 471 tcttcgccaacgacggctccttcatggag 499 ||||||||||||||||||| ||||||||| Sbjct: 22564 tcttcgccaacgacggctcgttcatggag 22536
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Plus Query: 507 agcagatgcagcaggagatgcag 529 ||||||||||||||||||||||| Sbjct: 543778 agcagatgcagcaggagatgcag 543800
>gb|AC109251.9| Mus musculus chromosome 1, clone RP23-350B3, complete sequence Length = 188481 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Plus Query: 975 ttgaattttgacaaatatttttt 997 ||||||||||||||||||||||| Sbjct: 66497 ttgaattttgacaaatatttttt 66519
>gb|AY126516.1| Mus musculus cytohesin 1 (Pscd1) mRNA, complete cds, alternatively spliced Length = 3173 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 3016 ctttgtattttgacaaatattttttaa 2990
>emb|AJ296689.1|PAB296689 Picea abies ATC microsatellite DNA, clone EATC1A10 Length = 317 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Plus Query: 745 tgaggaggacgatgatgatgatg 767 ||||||||||||||||||||||| Sbjct: 164 tgaggaggacgatgatgatgatg 186
>dbj|AB035537.2| Mus musculus CYTOHESIN-1 gene for cytohesin-1, complete cds Length = 5638 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 5454 ctttgtattttgacaaatattttttaa 5428
>dbj|AK220302.1| Mus musculus mRNA for mKIAA4240 protein Length = 3096 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 2974 ctttgtattttgacaaatattttttaa 2948
>gb|BC006658.1| Mus musculus pleckstrin homology, Sec7 and coiled-coil domains 1, mRNA (cDNA clone IMAGE:3501044), partial cds Length = 2891 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 2716 ctttgtattttgacaaatattttttaa 2690
>dbj|AK210975.1| Mus musculus cDNA, clone:Y2G0120E06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000017276, based on BLAT search Length = 275 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 143 ctttgtattttgacaaatattttttaa 117
>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence Length = 104878 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Plus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||||||||||||||||| ||||||| Sbjct: 1596 ctttgaattttgacaaatagtttttaa 1622
>gb|BC057974.1| Mus musculus pleckstrin homology, Sec7 and coiled-coil domains 1, mRNA (cDNA clone MGC:68136 IMAGE:5060913), complete cds Length = 3070 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 2933 ctttgtattttgacaaatattttttaa 2907
>ref|NM_011180.2| Mus musculus pleckstrin homology, Sec7 and coiled-coil domains 1 (Pscd1), mRNA dbj|AB035538.1| Mus musculus mRNA for cytohesin-1, complete cds Length = 3176 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Minus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 3019 ctttgtattttgacaaatattttttaa 2993
>emb|AL591204.14| Mouse DNA sequence from clone RP23-28C17 on chromosome 11, complete sequence Length = 148846 Score = 46.1 bits (23), Expect = 0.69 Identities = 26/27 (96%) Strand = Plus / Plus Query: 973 ctttgaattttgacaaatattttttaa 999 ||||| ||||||||||||||||||||| Sbjct: 139300 ctttgtattttgacaaatattttttaa 139326
>ref|XM_001220877.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_01657) mRNA, complete cds Length = 2316 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 2275 gaggaggacgatgatgatgatg 2296
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2463 agaaaaccaattttgctgcaat 2484 |||||||||||||||||||||| Sbjct: 18390523 agaaaaccaattttgctgcaat 18390502
>gb|AC186551.1| Pan troglodytes chromosome 7 clone CH251-720G4, complete sequence Length = 173362 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1765 cgagcactgcaagctccatagcacat 1790 ||||||||||||||||| |||||||| Sbjct: 85512 cgagcactgcaagctccttagcacat 85537
>ref|XM_966933.1| PREDICTED: Tribolium castaneum similar to CG8726-PB, isoform B (LOC660724), mRNA Length = 1701 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 ccgtcgcccccaccgccgccgc 564 |||||||||||||||||||||| Sbjct: 1543 ccgtcgcccccaccgccgccgc 1564
>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence Length = 213487 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 attccccaccccatccccaccc 61 |||||||||||||||||||||| Sbjct: 157850 attccccaccccatccccaccc 157829
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 5362 gaggaggacgatgatgatgatg 5341
>ref|XM_676020.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7843.2), mRNA Length = 417 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 337 gaggaggacgatgatgatgatg 358
>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence Length = 216751 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 attccccaccccatccccaccc 61 |||||||||||||||||||||| Sbjct: 45896 attccccaccccatccccaccc 45875
>gb|AY587891.1| Agastache rugosa 4-coumarate-CoA ligase mRNA, complete cds Length = 2000 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 557 gccgccgctggtgctggcgctg 578 |||||||||||||||||||||| Sbjct: 979 gccgccgctggtgctggcgctg 1000
>gb|AC124512.3| Mus musculus BAC clone RP23-444C17 from chromosome 18, complete sequence Length = 192528 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 850 tggtaatcattttgtttcattt 871 |||||||||||||||||||||| Sbjct: 136282 tggtaatcattttgtttcattt 136303
>gb|AC104286.11| Drosophila melanogaster X BAC RP98-13J2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176393 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 143347 gaggaggacgatgatgatgatg 143368
>gb|AY278947.1| Branchiostoma belcheri tsingtaunese glutamate-cysteine ligase modifier subunit mRNA, complete cds Length = 1649 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 760 tgatgatgttgccggtgtggag 781 |||||||||||||||||||||| Sbjct: 231 tgatgatgttgccggtgtggag 210
>gb|AC162804.2| Mus musculus BAC clone RP23-192H11 from chromosome 18, complete sequence Length = 183966 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 850 tggtaatcattttgtttcattt 871 |||||||||||||||||||||| Sbjct: 40534 tggtaatcattttgtttcattt 40555
>gb|AC093144.3| Homo sapiens chromosome 7 clone RP11-355D18, complete sequence Length = 43594 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1765 cgagcactgcaagctccatagcacat 1790 ||||||||||||||||| |||||||| Sbjct: 16240 cgagcactgcaagctccttagcacat 16265
>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145969 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 975 ttgaattttgacaaatattttt 996 |||||||||||||||||||||| Sbjct: 86633 ttgaattttgacaaatattttt 86654
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 cgtcgcccccaccgccgccgctggtg 569 ||||||| |||||||||||||||||| Sbjct: 42282561 cgtcgccgccaccgccgccgctggtg 42282586
>emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC clone B13A5 Length = 72305 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 41864 gaggaggacgatgatgatgatg 41885
>emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on chromosome 9 Contains the 3' end of the variant for the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 172845 Score = 44.1 bits (22), Expect = 2.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 28 ctctcctccccgattccccaccccatcccc 57 |||||||| ||||||||| ||||||||||| Sbjct: 91985 ctctcctctccgattccctaccccatcccc 92014
>gb|AC025169.5| Homo sapiens chromosome 5 clone CTC-352M6, complete sequence Length = 161920 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1496 atattaatgagttcttaagtga 1517 |||||||||||||||||||||| Sbjct: 67690 atattaatgagttcttaagtga 67711
>gb|AC010461.7| Homo sapiens chromosome 5 clone CTD-2275A5, complete sequence Length = 109588 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1496 atattaatgagttcttaagtga 1517 |||||||||||||||||||||| Sbjct: 41448 atattaatgagttcttaagtga 41469
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 cgtcgcccccaccgccgccgctggtg 569 ||||||| |||||||||||||||||| Sbjct: 54518 cgtcgccgccaccgccgccgctggtg 54543
>emb|Y14558.1|PSY14558 Pisum sativum mRNA for topoisomerase I Length = 3055 Score = 44.1 bits (22), Expect = 2.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 742 agctgaggaggacgatgatgatgatg 767 |||||||||||| ||||||||||||| Sbjct: 963 agctgaggaggaagatgatgatgatg 988
>emb|AL807368.1|NC62D11 Neurospora crassa DNA linkage group V cosmid contig 62D11 Length = 102165 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 745 tgaggaggacgatgatgatgat 766 |||||||||||||||||||||| Sbjct: 12300 tgaggaggacgatgatgatgat 12321
>emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosmid contig 21D9 Length = 55380 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 745 tgaggaggacgatgatgatgat 766 |||||||||||||||||||||| Sbjct: 7103 tgaggaggacgatgatgatgat 7082
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2463 agaaaaccaattttgctgcaat 2484 |||||||||||||||||||||| Sbjct: 58585 agaaaaccaattttgctgcaat 58564
>gb|AC015974.10| Homo sapiens BAC clone RP11-467A18 from 2, complete sequence Length = 196544 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1314 agttctcagcatttgtaatatg 1335 |||||||||||||||||||||| Sbjct: 52329 agttctcagcatttgtaatatg 52350
>ref|XM_956068.1| Neurospora crassa OR74A hypothetical protein (NCU04201.1) partial mRNA Length = 3264 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 745 tgaggaggacgatgatgatgat 766 |||||||||||||||||||||| Sbjct: 3093 tgaggaggacgatgatgatgat 3114
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 559 cgccgctggtgctggcgctgtc 580 |||||||||||||||||||||| Sbjct: 1817972 cgccgctggtgctggcgctgtc 1817993
>ref|NM_001044502.1| Xenopus tropicalis novel protein containing P21-Rho-binding domain (LOC733735), mRNA emb|CR761517.2| Xenopus tropicalis finished cDNA, clone TGas069o15 Length = 1433 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 1202 gaggaggacgatgatgatgatg 1223
>gb|AC099724.7| Mus musculus chromosome 18, clone RP23-458P14, complete sequence Length = 183108 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 850 tggtaatcattttgtttcattt 871 |||||||||||||||||||||| Sbjct: 169422 tggtaatcattttgtttcattt 169443
>emb|AL023873.2|DMC125H10 Drosophila melanogaster cosmid clone 125H10 Length = 39552 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 746 gaggaggacgatgatgatgatg 767 |||||||||||||||||||||| Sbjct: 35579 gaggaggacgatgatgatgatg 35600 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 573,825,333 Number of extensions: 33023412 Number of successful extensions: 251431 Number of sequences better than 10.0: 66 Number of HSP's gapped: 251404 Number of HSP's successfully gapped: 120 Length of query: 2802 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2779 Effective length of database: 18,503,978,556 Effective search space: 51422556407124 Effective search space used: 51422556407124 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
