ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf21o13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os12g0507700:Os12g0507700 156 8e-38
2AK107537:Os02g0438200 30 6.7
3AK102728:Os02g0438200 30 6.7

>Os12g0507700:Os12g0507700 |
          Length = 162
 Score =  156 bits (394), Expect = 8e-38
 Identities = 86/141 (60%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
 Frame = -3

Query: 1506 PGLGRREVPTKRELPSA---T*PQGGKNRXXXXXXXXXXXLMGRSAIAKSTGLLR*VASS 1336
            PG G + VP+K+ELPSA      +  ++             MGRSAIAKS GLLR + + 
Sbjct: 24   PGWGGK-VPSKKELPSAHRLVDTKEERSASRTFIVFLHLASMGRSAIAKSAGLLREIKNK 82

Query: 1335 IPLNLTNRVQPTAARSAETALWVPHPRTGIYYPRGFEWVMEDVPSSAATFQQTYWHRSGD 1156
               NL +RVQP+ ARSAETALWVPHPRTGIYYP+GFEWVMEDVPSSAA+F+Q YW RSGD
Sbjct: 83   QSSNLMSRVQPSEARSAETALWVPHPRTGIYYPKGFEWVMEDVPSSAASFRQLYWLRSGD 142

Query: 1155 AETASSPMSTDGTAAFVNPFL 1093
            AETASSP S D  AAF +PF+
Sbjct: 143  AETASSPTSND-AAAFDHPFV 162



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>AK107537:Os02g0438200 |
          Length = 630

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = -2

Query: 1432 QTVADFSASPAFVDGPECNCKIDWSSPVSSL*HPSKPYEPGAANSSKVSRDSTVGATPKD 1253
            Q+    S+S   +  P  + ++D S  +  +   SK Y     N S ++ D        +
Sbjct: 288  QSSLSVSSSSPEIGDPNDHLQVDSSQDIVHIEDRSKSYPE--RNLSNLTADMNNPGKTHN 345

Query: 1252 RDLLPQGL*VGHGGCPKQRSNVPADILAQ 1166
            ++ L Q L + HGG       +P D +A+
Sbjct: 346  KESLDQALKIKHGGLISCNQQIPLDAIAK 374



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>AK102728:Os02g0438200 |
          Length = 483

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = -2

Query: 1432 QTVADFSASPAFVDGPECNCKIDWSSPVSSL*HPSKPYEPGAANSSKVSRDSTVGATPKD 1253
            Q+    S+S   +  P  + ++D S  +  +   SK Y     N S ++ D        +
Sbjct: 141  QSSLSVSSSSPEIGDPNDHLQVDSSQDIVHIEDRSKSYPE--RNLSNLTADMNNPGKTHN 198

Query: 1252 RDLLPQGL*VGHGGCPKQRSNVPADILAQ 1166
            ++ L Q L + HGG       +P D +A+
Sbjct: 199  KESLDQALKIKHGGLISCNQQIPLDAIAK 227


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 74,696,026
Number of extensions: 1655512
Number of successful extensions: 3758
Number of sequences better than 10.0: 3
Number of HSP's gapped: 3756
Number of HSP's successfully gapped: 3
Length of query: 898
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 788
Effective length of database: 10,995,345
Effective search space: 8664331860
Effective search space used: 8664331860
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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