ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf21o13 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os12g32290:12012.t02929:unspliced-genomic expressed protein| Length = 812 Score = 147 bits (315), Expect(5) = 8e-53 Identities = 58/71 (81%), Positives = 63/71 (88%) Frame = -3 / +3 Query: 1326 NLTNRVQPTAARSAETALWVPHPRTGIYYPRGFEWVMEDVPSSAATFQQTYWHRSGDAET 1147 NL +RVQP+ ARSAETALWVPHPRTGIYYP+GFEWVMEDVPSSAA+F+Q YW RSGDAET Sbjct: 351 NLMSRVQPSEARSAETALWVPHPRTGIYYPKGFEWVMEDVPSSAASFRQLYWLRSGDAET 530 Query: 1146 ASSPMSTDGTA 1114 ASSP S D A Sbjct: 531 ASSPTSNDAAA 563 Score = 46.9 bits (96), Expect(5) = 8e-53 Identities = 15/25 (60%), Positives = 20/25 (80%) Frame = -2 / +1 Query: 1417 FSASPAFVDGPECNCKIDWSSPVSS 1343 + SP +DGP+CNCKI WS+PV+S Sbjct: 73 YCVSPPRIDGPKCNCKIGWSAPVTS 147 Score = 40.5 bits (82), Expect(5) = 8e-53 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -1 / +1 Query: 1115 LPLLIHFCECIRGLTLEESLIAAVLQATTIV 1023 LPL+ H C +RG LEESL AV++ TI+ Sbjct: 559 LPLITHLCRSMRGFPLEESLTDAVVEVLTIL 651 Score = 35.0 bits (70), Expect(5) = 8e-53 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = -2 / +2 Query: 994 SCSDFQHVGTASTERSVSNSALIFYIAF 911 SCSD Q VG AST+RS AL+F F Sbjct: 683 SCSDSQCVGVASTDRSRIKFALLFSFVF 766 Score = 26.3 bits (51), Expect(5) = 8e-53 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 / +2 Query: 1469 NCHRLLDPKEERTDSSRF 1416 + HRL+D KEER+ S F Sbjct: 20 SAHRLVDTKEERSASRTF 73 Score = 132 bits (282), Expect(4) = 1e-44 Identities = 57/70 (81%), Positives = 61/70 (87%) Frame = +2 / -2 Query: 1115 AVPSVDIGELAVSASPLLCQYVCWNVAALLGTSSMTHSKPLG**IPVLGCGTHSAVSADL 1294 A S D+GELAVSASPLL QY C N AALLGTSSMTHSKPLG**IPVLGCGTH+AVSADL Sbjct: 562 AAASFDVGELAVSASPLLSQYSCLNEAALLGTSSMTHSKPLG**IPVLGCGTHNAVSADL 383 Query: 1295 AAVGCTRFVR 1324 A+ GCTR +R Sbjct: 382 ASEGCTRLIR 353 Score = 40.0 bits (81), Expect(4) = 1e-44 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +1 / -1 Query: 1027 MVVACRTAAISDSSSVRPLMHSQKWINKGSCAV 1125 MV TA++SDSSS +PLM KW+ KGS + Sbjct: 647 MVRTSTTASVSDSSSGKPLMLLHKWVIKGSSII 549 Score = 38.6 bits (78), Expect(4) = 1e-44 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +1 / -2 Query: 1348 LPEKTSRFCNCTPAHQ 1395 LPE+TSRFCNCT AH+ Sbjct: 142 LPEQTSRFCNCTSAHR 95 Score = 37.7 bits (76), Expect(4) = 1e-44 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = +3 / -3 Query: 924 KINAEFDTDLSVDAVPTCWKSEQLV 998 K A F DLSVDA PT W+SEQL+ Sbjct: 753 KRRANFILDLSVDATPTHWESEQLL 679 Score = 115 bits (245), Expect(4) = 3e-34 Identities = 48/65 (73%), Positives = 55/65 (84%) Frame = -2 / +2 Query: 1324 PYEPGAANSSKVSRDSTVGATPKDRDLLPQGL*VGHGGCPKQRSNVPADILAQERRRRDS 1145 PYEPGAA SKVS DS VGATPK+RDLL QGL*VGHGGCP+QR + A +LAQERRRRD Sbjct: 353 PYEPGAAFRSKVSGDSIVGATPKNRDLLSQGL*VGHGGCPQQRGFIQAAVLAQERRRRDG 532 Query: 1144 KLSYV 1130 +LS++ Sbjct: 533 ELSHI 547 Score = 34.1 bits (68), Expect(4) = 3e-34 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 / +1 Query: 995 QLLRFPACRHRIHRKISVKLCINLLYC 915 QL FP CR IHR+I K+C L C Sbjct: 682 QLF*FPVCRCGIHRQIKNKVCPPFLLC 762 Score = 32.7 bits (65), Expect(4) = 3e-34 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -3 / +3 Query: 1143 SSPMSTDGTAAFVNPFL*MHKRPHTGRIT 1057 +S +++ AAF +PF+* H+R TGRIT Sbjct: 531 ASSPTSNDAAAFDHPFV*KHERLSTGRIT 617 Score = 31.3 bits (62), Expect(4) = 3e-34 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = -3 / +2 Query: 1392 MGRSAIAKSTGLLR*V 1345 MGRSAIAKS GLLR*+ Sbjct: 98 MGRSAIAKSAGLLR*L 145 Score = 49.2 bits (101), Expect(4) = 5e-15 Identities = 18/22 (81%), Positives = 19/22 (86%) Frame = +3 / -3 Query: 1197 RCLGHPP*PTQSPWGSKSLSLG 1262 RC GHPP*PTQSPW S+SL LG Sbjct: 480 RCWGHPP*PTQSPWDSRSLFLG 415 Score = 38.2 bits (77), Expect(4) = 5e-15 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = +3 / -1 Query: 1344 LLTGEDQSILQLHSGPSTKAGE 1409 L+TG DQ ILQLH GPS + GE Sbjct: 146 LVTGADQPILQLHFGPSMRGGE 81 Score = 29.9 bits (59), Expect(4) = 5e-15 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = +1 / -1 Query: 880 AFI*VKSVKMRMQYRRLMQSLTLIFRWMRCLHAGNLSSWFIILCIDLATMVVACRTAAIS 1059 +F+ V Q R+ Q+L LI RWM LH GN ++ + + +V T A Sbjct: 797 SFLLVNQQVGEKQRRKGGQTLFLICRWMPHLHTGNQNNC*VFHRMHAPFKMVRTSTTASV 618 Query: 1060 DSSS 1071 SS Sbjct: 617 SDSS 606 Score = 29.5 bits (58), Expect(4) = 5e-15 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +3 / -3 Query: 1047 CCYQ*FFQCEASYAFTEMD*QRQ 1115 C +*FFQ +AS+A T+M QRQ Sbjct: 627 CICK*FFQWKASHASTQMGDQRQ 559 Score = 54.7 bits (113), Expect(3) = 5e-12 Identities = 24/36 (66%), Positives = 28/36 (77%) Frame = -1 / +1 Query: 1244 TTPGALSGSWRMSQAAQQRSSRHTGTGAATQRQQAL 1137 T P ALSGSWRMS AA+ S TG+GAATQR++AL Sbjct: 433 TIPRALSGSWRMSPAARLHSGSCTGSGAATQRRRAL 540 Score = 32.7 bits (65), Expect(3) = 5e-12 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 1114 CLC*SISVNA*EASHWKNH**QQFYK 1037 CL I V A*EA HWKNH Q +K Sbjct: 560 CL*SPICVEA*EAFHWKNHLQMQLWK 637 Score = 29.9 bits (59), Expect(3) = 5e-12 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = -1 / +3 Query: 1391 WAGVQLQNRLVFSGK* 1344 WA VQLQNRLV SG * Sbjct: 99 WAEVQLQNRLVCSGN* 146 Score = 46.4 bits (95), Expect(3) = 2e-10 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +1 / -1 Query: 1198 AAWDILHDPLKAPGVVNPCPWV 1263 AA DILHDPLKA G+V+PC WV Sbjct: 479 AAGDILHDPLKALGIVDPCSWV 414 Score = 38.2 bits (77), Expect(3) = 2e-10 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = +2 / -3 Query: 1346 TYRRRPVDFAIALRPINKGW 1405 +YR RP DFAIALRPI+ W Sbjct: 144 SYRSRPADFAIALRPIDARW 85 Score = 27.2 bits (53), Expect(3) = 2e-10 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 / -2 Query: 1058 VILPV*GLLCIHRNGLTKAA 1117 VILPV L C + NG +KAA Sbjct: 616 VILPVESLSCFYTNG*SKAA 557
>LOC_Os12g32284:12012.t004149:unspliced-genomic expressed protein| Length = 1762 Score = 92.3 bits (195), Expect(2) = 2e-18 Identities = 37/61 (60%), Positives = 46/61 (75%) Frame = +2 / +1 Query: 179 RWGVRGWPWVRMGLWKCLWLSISIFKGPVSGH*VSEKV*RG*STKACFVRAC*KVSSLWL 358 RWG+ W W R+GL + +WLS+S+ PVSGH*VSE+ R *S K CF RAC*K+SSLW+ Sbjct: 1390 RWGMWSWSWARVGLRQSVWLSVSLV*SPVSGH*VSEEDRRR*SIKPCFSRAC*KISSLWI 1569 Query: 359 V 361 V Sbjct: 1570 V 1572 Score = 22.1 bits (42), Expect(2) = 2e-18 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2 / +2 Query: 149 NASERIRLGHRW 184 NASE + LGHR+ Sbjct: 1277 NASEYVWLGHRY 1312 Score = 89.0 bits (188), Expect = 1e-16 Identities = 37/44 (84%), Positives = 38/44 (86%) Frame = +3 / +2 Query: 237 CQYRSSRVQFQGIEFQKKSEGDEAPKLVSSGLVEKSRPYG*YNC 368 CQYRSSRVQFQGIEFQKK+EGDEA LVS VEKSRPYG*Y C Sbjct: 1448 CQYRSSRVQFQGIEFQKKTEGDEASSLVSPERVEKSRPYG*YGC 1579 Score = 80.8 bits (170), Expect(2) = 2e-15 Identities = 35/62 (56%), Positives = 41/62 (66%) Frame = -3 / -3 Query: 366 SYTSHKDETFQQALTKQALVLHPLQTFSETQCPETGPLKIDIDNHKHFQSPILTQGQPRT 187 ++T HKDE FQ AL KQ L+LH L++ SETQCPETG D DNH +SP L Q Q Sbjct: 1577 NHTIHKDEIFQHALEKQGLMLHLLRSSSETQCPETGL*TSDTDNHTLCRSPTLAQDQLHI 1398 Query: 186 PH 181 PH Sbjct: 1397 PH 1392 Score = 23.1 bits (44), Expect(2) = 2e-15 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -3 / -2 Query: 183 HRCPSRIRSEAF 148 +RCPS+ SEAF Sbjct: 1311 YRCPSQTYSEAF 1276 Score = 77.1 bits (162), Expect = 5e-13 Identities = 34/46 (73%), Positives = 37/46 (80%) Frame = -2 / -2 Query: 370 SQLY*P*GRDFSTSPDETSFGASSPSDFF*NSMP*NWTLEDRY*QP 233 +Q Y P*GRDFST ET ASSPS FF*NSMP*NWTL++RY*QP Sbjct: 1581 AQPYYP*GRDFSTRSGETRLDASSPSVFF*NSMP*NWTLDERY*QP 1444 Score = 58.3 bits (121), Expect = 2e-07 Identities = 28/44 (63%), Positives = 34/44 (77%) Frame = +1 / +3 Query: 232 MVVNIDLQGSSFRALSFRKSLKGMKHQSLFRQGLLKSLVLMASI 363 MVV+I SSFRALSFR+ K MKHQ+LF Q +LK+LVLM S+ Sbjct: 1443 MVVSIARLESSFRALSFRRRPKEMKHQALFLQSVLKNLVLMDSM 1574 Score = 57.9 bits (120), Expect = 3e-07 Identities = 28/41 (68%), Positives = 30/41 (73%) Frame = -1 / -1 Query: 362 ILAIRTRLFNKP*RNKLWCFIPFRLFLKLNALKLDP*RSIL 240 IL+IRTR FN RNK CFI F L LKLNALKLD R+IL Sbjct: 1573 ILSIRTRFFNTLWRNKA*CFISFGLLLKLNALKLDSRRAIL 1451
>LOC_Os01g18080:12001.t01603:unspliced-genomic tyrosine-protein phosphatase non-receptor type 23, putative,| expressed Length = 1950 Score = 28.6 bits (56), Expect(2) = 0.45 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 / -1 Query: 197 WPWVRMGLWKCLWLSISIFKG 259 W W+ + LW+ LWL I ++ G Sbjct: 693 WLWLWLWLWEWLWLWIWVWLG 631 Score = 26.3 bits (51), Expect(2) = 0.45 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 / -1 Query: 155 SERIRLGHRWGVRGWPWVRMGLW 223 S R+ L R G+ W W R+G+W Sbjct: 855 SVRVWLR*RLGIWVWLW*RLGVW 787
>LOC_Os07g23630:12007.t02060:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 1584 Score = 37.3 bits (75), Expect = 0.54 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -1 / +1 Query: 1025 VARSIHNMINQLLRFPACRHRIHRKISVKLCINLLYCILI 906 V H + NQ+ RIH+ + LCINLL C+LI Sbjct: 1249 VCEYAHCLSNQIYTTRELDVRIHKPFKISLCINLLSCLLI 1368
>LOC_Os11g45770:12011.t04104:unspliced-genomic hypothetical protein| Length = 866 Score = 36.8 bits (74), Expect = 0.74 Identities = 13/43 (30%), Positives = 28/43 (65%) Frame = +2 / +2 Query: 488 NIMWIIHGTFFVLDNCLYIWLMLYINIFLVGCTLQVFIFTLVK 616 N +W T++V L+++L L++ ++L ++ +FIFT++K Sbjct: 572 NFLWDRGSTWYVD**SLHLYLYLHLYLYLFSISISIFIFTIIK 700
>LOC_Os11g36530:12011.t03200:unspliced-genomic dnaJ domain containing protein| Length = 3798 Score = 36.3 bits (73), Expect = 1.0 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -3 / +3 Query: 729 SHEFTTVLNIFMHILFQLYC 670 +H+FTT L I+ HI+F LYC Sbjct: 3144 NHQFTTTLLIYRHIIFPLYC 3203
>LOC_Os04g41238:12004.t05468:unspliced-genomic expressed protein| Length = 1379 Score = 27.2 bits (53), Expect(3) = 1.1 Identities = 9/19 (47%), Positives = 16/19 (84%) Frame = +1 / +3 Query: 2416 LMILFPAVPILLFSLLVSV 2472 L++LFP +L+FSLL+++ Sbjct: 585 LLVLFPVQNLLIFSLLLTI 641 Score = 26.3 bits (51), Expect(3) = 1.1 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +2 / +2 Query: 392 CYHCPLIVVNCLPGKLFESIL 454 C H PL+ N P L SIL Sbjct: 470 CRHVPLVATNLFPFSLVPSIL 532 Score = 24.9 bits (48), Expect(3) = 1.1 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +3 / +3 Query: 3 ASSSSHPPESTTGGAG 50 ASSSS PP GG G Sbjct: 192 ASSSSRPPPPGAGGVG 239
>LOC_Os09g35830:12009.t03062:unspliced-genomic RNA-binding protein, putative, expressed| Length = 12479 Score = 29.0 bits (57), Expect(3) = 1.1 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +2 / +2 Query: 1418 ICYCLFFPPW 1447 IC+C F+PPW Sbjct: 10538 ICFCFFWPPW 10567 Score = 28.6 bits (56), Expect(3) = 1.1 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +2 / +3 Query: 1091 HRNGLTKAAVPSVDIGELAVSASPLLCQYVCWNVAALLGTSSMTHS 1228 HR +T P + L+ S S L+C ++C ++ +L +S+ T S Sbjct: 3954 HR*IVTHLMPPQLLTTPLSPSQSHLICAFLCGHLVEVLSSSASTIS 4091 Score = 26.7 bits (52), Expect(3) = 1.1 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 / +3 Query: 6 SSSSHPPESTTGGAGRHPSMV 68 S SHPP+ ++ AG H S+V Sbjct: 2592 SRRSHPPKHSSYDAGEHTSVV 2654
>LOC_Os12g33060:12012.t02999:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 9834 Score = 27.6 bits (54), Expect(2) = 1.3 Identities = 11/40 (27%), Positives = 24/40 (60%) Frame = +2 / -2 Query: 503 IHGTFFVLDNCLYIWLMLYINIFLVGCTLQVFIFTLVKYM 622 IH +++ +YI++ +YI I+++ + +I T + YM Sbjct: 4820 IHIYAYIIYAYIYIYIYIYIYIYILYLYMFQYICTCIIYM 4701 Score = 25.4 bits (49), Expect(2) = 1.3 Identities = 7/24 (29%), Positives = 15/24 (62%) Frame = +1 / -3 Query: 595 VYFYSCEVHAIHLVCIVQYVWIWL 666 +Y Y C +A +C+ Y++I++ Sbjct: 4699 IYTYICFANAYVCMCVCVYIYIYI 4628
>LOC_Os06g51029:12006.t04786:unspliced-genomic OsFtsH1 - Oryza sativa FtsH protease, homologue of AtFtsH1/5,| expressed Length = 7677 Score = 29.9 bits (59), Expect(2) = 1.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 / +3 Query: 1220 SWRMSQAAQQRSSRHTGTGAAT 1155 SWR Q+RSSRHT T + + Sbjct: 7212 SWRRPTQEQRRSSRHTSTSSTS 7277 Score = 23.1 bits (44), Expect(2) = 1.4 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -2 / +1 Query: 1261 PKDRDLLPQGL*VGHGGC 1208 P D+ P+GL GH GC Sbjct: 7135 PLVADVEPEGLLDGHRGC 7188
>LOC_Os01g64030:12001.t05771:unspliced-genomic Leucine Rich Repeat family protein, expressed| Length = 7370 Score = 29.5 bits (58), Expect(2) = 1.4 Identities = 10/35 (28%), Positives = 20/35 (57%) Frame = +2 / -3 Query: 446 SILMF**TWTFSYSNIMWIIHGTFFVLDNCLYIWL 550 ++ M+* W + I WI+ F++ C+YI++ Sbjct: 4803 TVNMY*NIWIYYTKVIHWIVSQDIFIIYICIYIYI 4699 Score = 23.5 bits (45), Expect(2) = 1.4 Identities = 6/14 (42%), Positives = 12/14 (85%) Frame = +2 / -1 Query: 533 CLYIWLMLYINIFL 574 C+YI++ +YI I++ Sbjct: 4685 CIYIYIYIYIYIYI 4644
>LOC_Os10g31440:12010.t02468:unspliced-genomic lipoprotein, putative, expressed| Length = 1037 Score = 35.9 bits (72), Expect = 1.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 / +2 Query: 173 GHRWGVRGWPWVRMGLWKCLWLSISIFK 256 G W VRGW W+ + LW +W IF+ Sbjct: 155 GRWWRVRGWFWMGIRLWLWVWSGRRIFR 238
>LOC_Os02g02050:12002.t00105:unspliced-genomic SNF2 family N-terminal domain containing protein, expressed| Length = 16644 Score = 35.9 bits (72), Expect = 1.4 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -3 / -3 Query: 387 LCQLYDRSYTSHKDETFQQALTKQALVLHPLQTFSETQCPETGP 256 L Q+ DR+Y H+ QQ + K A +L + SE Q E+GP Sbjct: 1273 LYQILDRTYKYHQKTPIQQTVKKLASILIAVN*ESERQTSESGP 1142
>LOC_Os10g31460:12010.t02469:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 8917 Score = 35.4 bits (71), Expect = 1.9 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 / +1 Query: 182 WGVRGWPWVRMGLWKCLW 235 W R W W+R +WKC+W Sbjct: 8620 WWQRVW*WIRKRIWKCVW 8673
>LOC_Os10g31420:12010.t02467:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 934 Score = 35.4 bits (71), Expect = 1.9 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 / +3 Query: 167 RLGHRWGVRGWPWVRMGLWKCLWLSISIF 253 R RWG R W WVR W +WL + ++ Sbjct: 120 RWRRRWGRRRWWWVREWFWVGIWLWLRVW 206
>LOC_Os07g19070:12007.t01765:unspliced-genomic expressed protein| Length = 4179 Score = 35.4 bits (71), Expect = 1.9 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 / +2 Query: 1466 SSLLVGTSLLPNPGIYSCSFLVGTRPTLSGSHGLHI 1573 S+LLV S+LP PG +S L GT P + G+ I Sbjct: 260 SNLLVSPSILPPPGRHSICILAGTVPNAQIARGIDI 367
>LOC_Os03g43280:12003.t03726:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3693 Score = 35.4 bits (71), Expect = 1.9 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1 / +1 Query: 1025 VARSIHNMINQLLRFPACRHRIHRKISVKLCINLLYCILI 906 V H + NQ+ RIH+ + LCI+LL C+LI Sbjct: 3358 VCEFAHCLSNQIYTTRELDVRIHKSFKISLCIDLLSCLLI 3477
>LOC_Os02g15230:12002.t01316:unspliced-genomic esterase precursor, putative, expressed| Length = 3536 Score = 35.4 bits (71), Expect = 1.9 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +1 / +3 Query: 1021 ATMVVACRTAAISDSSSVRPLMHSQKWINKGSCAV 1125 AT A TAA S ++SVRPL+ WI+ +C V Sbjct: 663 ATPPAAAPTAASSSTTSVRPLVSPLDWISMSACFV 767
>LOC_Os12g40660:12012.t03745:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2928 Score = 35.0 bits (70), Expect = 2.6 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1 / +1 Query: 1025 VARSIHNMINQLLRFPACRHRIHRKISVKLCINLLYCILI 906 V H + NQ+ RIH+ + LCI+LL C+LI Sbjct: 2593 VCEYAHCLSNQICTTRELDVRIHKPFKISLCIDLLSCLLI 2712
>LOC_Os12g01250:12012.t00024:unspliced-genomic csAtPR5, putative| Length = 5206 Score = 35.0 bits (70), Expect = 2.6 Identities = 23/76 (30%), Positives = 32/76 (42%) Frame = +3 / -1 Query: 1977 DPSDGFRLIIHLSRLLWLISSYKLSWEICVCLPAGYCAVWHQKNLRVRCLMTLSIFPSMI 2156 DPS + L I S L + + +C G C VW K LR+ L + S+FP Sbjct: 4246 DPSLTWILTIVASTALQVQHMSTQAPHVCWTNICGACTVWCIKTLRLNTLSSASVFPFTF 4067 Query: 2157 LQQNNEEHGI*YSLRD 2204 +N I + RD Sbjct: 4066 SSTSNVTGSITTTARD 4019
>LOC_Os11g35762:12011.t03124:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4637 Score = 35.0 bits (70), Expect = 2.6 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1 / +2 Query: 1025 VARSIHNMINQLLRFPACRHRIHRKISVKLCINLLYCILI 906 V H + NQ+ RIH+ + LCI+LL C+LI Sbjct: 4469 VCEYAHCLSNQIYTTRELDVRIHKPFKISLCIDLLSCLLI 4588
>LOC_Os04g11580:12004.t00983:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 899 Score = 35.0 bits (70), Expect = 2.6 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1 / +3 Query: 1025 VARSIHNMINQLLRFPACRHRIHRKISVKLCINLLYCILI 906 V H + NQ+ RIH+ + LCI+LL C+LI Sbjct: 660 VCEYAHCLSNQIYTTRELDVRIHKPFKISLCIDLLSCLLI 779
>LOC_Os02g31940:12002.t02837:unspliced-genomic potassium transporter 1, putative, expressed| Length = 6213 Score = 34.5 bits (69), Expect = 3.6 Identities = 11/52 (21%), Positives = 29/52 (55%) Frame = +2 / -1 Query: 467 TWTFSYSNIMWIIHGTFFVLDNCLYIWLMLYINIFLVGCTLQVFIFTLVKYM 622 +WT I++ + F++ NC+ W++ +I +F + L + ++T + ++ Sbjct: 2184 SWTLILILIIFQFYSKFWISLNCICTWILFFIFLFFIPNFLYLKLYTYLDFL 2029
>LOC_Os10g31320:12010.t02458:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 929 Score = 34.1 bits (68), Expect = 5.0 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +2 / +3 Query: 179 RWGVRGWPWVRMGLWKCLWL 238 RW R W W+R GLW +W+ Sbjct: 411 RWWCRIWVWLR*GLWLWIWI 470
>LOC_Os08g41250:12008.t03854:unspliced-genomic signal recognition particle receptor beta subunit, putative,| expressed Length = 3002 Score = 34.1 bits (68), Expect = 5.0 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 / +3 Query: 530 NCLYIWLMLYINIFLVGCTLQVFIFTLVKYMQFT*CV*CNMSGY 661 NC++ L +I+I +V + VFI + T +*C+ SGY Sbjct: 2253 NCMFFLLTYHISITIVHQIVMVFILNFYNFNASTYNL*CSFSGY 2384
>LOC_Os08g14180:12008.t01294:unspliced-genomic flavonol 4-sulfotransferase, putative, expressed| Length = 4598 Score = 34.1 bits (68), Expect = 5.0 Identities = 12/43 (27%), Positives = 27/43 (62%) Frame = +2 / +1 Query: 533 CLYIWLMLYINIFLVGCTLQVFIFTLVKYMQFT*CV*CNMSGY 661 C+YI++ +YI IFL+ + I++++ ++ *C C++ + Sbjct: 3142 CIYIYIYIYIYIFLI*NKHIIKIYSMLNLIKLI*CYKCDLKKF 3270
>LOC_Os07g40900:12007.t03749:unspliced-genomic vegetative cell wall protein gp1 precursor, putative, expressed| Length = 1440 Score = 34.1 bits (68), Expect = 5.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 / -1 Query: 164 IRLGHRWGVRGWPWVRMGLW 223 IR HRW +R W +R+GLW Sbjct: 510 IRFRHRWHIRLWRPIRIGLW 451
>LOC_Os06g09870:12006.t00865:unspliced-genomic glycine-rich cell wall structural protein 2 precursor, putative,| expressed Length = 1107 Score = 34.1 bits (68), Expect = 5.0 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 / +3 Query: 167 RLGHRWGVRGWPWVRMGLWKCLWLSISIFKG 259 R G RW W WVR W +WL + ++ G Sbjct: 120 RRGRRWRRGRWWWVREWFWMGIWLWLWVWPG 212
>LOC_Os06g04090:12006.t00300:unspliced-genomic NAM protein, putative, expressed| Length = 3489 Score = 34.1 bits (68), Expect = 5.0 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -3 / -3 Query: 2328 LALYHSMTPTSNLKERTYSPLRRTERQTTEMLHL* 2224 +A+ HS P +L R++SP R ER+T LHL* Sbjct: 1144 VAMPHSQPPIYHLTSRSHSPPRVRERETQLELHL* 1040
>LOC_Os01g36590:12001.t03207:unspliced-genomic nodulin-like protein, putative| Length = 5502 Score = 34.1 bits (68), Expect = 5.0 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +1 / +1 Query: 1195 CAAWDILHDPLKAPGVVNPCPWV 1263 C+ WD++ D AP CPW+ Sbjct: 5341 CSIWDVVCDARNAPATATSCPWL 5409
>LOC_Os12g08070:12012.t00689:unspliced-genomic prenyltransferase/ zinc ion binding protein, putative, expressed| Length = 1942 Score = 33.6 bits (67), Expect = 6.8 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -1 / -1 Query: 92 ARATEGGDDHGWMPSRSAGGALG 24 ++ T GG DHGW+ R G LG Sbjct: 217 SKTTRGGKDHGWIAHRRGGRGLG 149
>LOC_Os09g03380:12009.t00235:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5329 Score = 33.6 bits (67), Expect = 6.8 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 / +2 Query: 77 GGDDHGWMPSRSAGGALGWMGRGAR 3 GGD+ GW P R A GW G AR Sbjct: 5105 GGDELGWRPGRWRTLAAGWWGGAAR 5179
>LOC_Os02g55220:12002.t05098:unspliced-genomic carboxyl-terminal proteinase, putative| Length = 2135 Score = 33.6 bits (67), Expect = 6.8 Identities = 9/27 (33%), Positives = 19/27 (70%) Frame = +2 / +3 Query: 539 YIWLMLYINIFLVGCTLQVFIFTLVKY 619 ++ + Y+ I+L+GC L V +T++K+ Sbjct: 630 HVCIFFYVYIYLIGCALGVIYYTVIKF 710
>LOC_Os01g08530:12001.t00731:unspliced-genomic fibroin heavy chain precursor, putative, expressed| Length = 1461 Score = 33.6 bits (67), Expect = 6.8 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +2 / +3 Query: 179 RWGVRGWPWVRMGLWKCLW 235 RW +GW W R G W+ +W Sbjct: 414 RWWSQGWRWSRGGWWRWIW 470
>LOC_Os09g29830:12009.t02661:unspliced-genomic DNA binding protein, putative, expressed| Length = 3416 Score = 31.8 bits (63), Expect(2) = 9.2 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -3 / -3 Query: 1539 RVPTRKLQLYIPGLGRREVPTKR 1471 R P R L LY+P GRREV R Sbjct: 459 RCPVRILMLYVPARGRREVEDHR 391 Score = 24.9 bits (48), Expect(2) = 9.2 Identities = 9/34 (26%), Positives = 18/34 (52%) Frame = -2 / -3 Query: 2203 SLKEYQIPCSSLFC*RIIDGKMDKVMRHRTRKFF 2102 +L++ Q+P C + D++ H+ R+FF Sbjct: 3264 ALQQIQLPACCSSCCSVNARSPDRISSHQGRRFF 3163
>LOC_Os08g42080:12008.t03937:unspliced-genomic ACR5, putative, expressed| Length = 2514 Score = 33.1 bits (66), Expect = 9.4 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = +2 / -2 Query: 2012 VETSLADFELQTLMGDMCLPACGILCSLASEELACAVSHDLIHLPINDPSAE**RAWD 2185 V TS + +L+G +C I L S AC VS L+H+ + SAE W+ Sbjct: 1703 VGTSSHKTRISSLLGSVCHSHAKI*QYLCSSGAACCVSSSLVHVSGQNVSAETEAQWN 1530
>LOC_Os08g27250:12008.t02489:unspliced-genomic hypothetical protein| Length = 2447 Score = 33.1 bits (66), Expect = 9.4 Identities = 10/24 (41%), Positives = 19/24 (79%) Frame = +1 / +2 Query: 586 PASVYFYSCEVHAIHLVCIVQYVW 657 P + YF++C+ +A HLVCI+ +++ Sbjct: 995 PFNFYFHTCQCYAHHLVCILFFLF 1066
>LOC_Os05g12460:12005.t04672:unspliced-genomic expressed protein| Length = 1514 Score = 33.1 bits (66), Expect = 9.4 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +2 / +1 Query: 1112 AAVPSVDIGELAVSASPLLCQYVCWNVAALL 1204 +A P+ +G+++VS + C Y CW+VA LL Sbjct: 52 SATPARLLGDVSVSVNVPRCCY*CWSVAVLL 144
>LOC_Os04g18730:12004.t01615:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8657 Score = 33.1 bits (66), Expect = 9.4 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 / +3 Query: 1971 HVDPSDGFRLIIHLSRLLWLISSYKLSWEICVCLPAGYCAVWHQ 2102 H+ S G L I LS+ +WLI ++ W P +CA++ Q Sbjct: 3609 HLTIS*GSTLRIKLSQSIWLIMCNQIKWWYLKLFPNIWCAIYGQ 3740
>LOC_Os02g29980:12002.t02691:unspliced-genomic glucan endo-1,3-beta-glucosidase 4 precursor, putative, expressed| Length = 5728 Score = 33.1 bits (66), Expect = 9.4 Identities = 8/24 (33%), Positives = 18/24 (75%) Frame = +1 / +2 Query: 598 YFYSCEVHAIHLVCIVQYVWIWLI 669 +F+ CEV+ ++L+C+ Y +W++ Sbjct: 1988 FFFFCEVNCVYLLCLFLYFRLWIM 2059 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 1,091,608,226 Number of extensions: 17580981 Number of successful extensions: 70060 Number of sequences better than 10.0: 40 Length of query: 898 Length of database: 55,613,886 Length adjustment: 52 Effective length of query: 846 Effective length of database: 52,687,430 Effective search space: 44573565780 Effective search space used: 44573565780 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
