ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf18j10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001074428.1| Oryza sativa (japonica cultivar-group) Os11g0481200 (Os11g0481200) mRNA, complete cds Length = 2004 Score = 946 bits (477), Expect = 0.0 Identities = 987/1157 (85%) Strand = Plus / Plus Query: 419 aatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgcaatatgt 478 ||||| ||||| ||||||||||||||||| |||||| ||||||||| ||||| |||||| Sbjct: 299 aatggttacttacgtgtccggtgcaatggtggcttgaaccaacaacgtagtgcgatatgt 358 Query: 479 aatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttagataca 538 |||||||||||||| |||||||| ||||||||||||||||||||||||||| | || ||| Sbjct: 359 aatgctgttgttgctgcacgaataatgaatgctacactagtgctgccagagctggacaca 418 Query: 539 aattcattctggcatgacgagagtggttttgtagatacatatgatgttccccacttcatc 598 ||||| ||||||||||| |||||||||||| ||| || |||||||| | |||||||||| Sbjct: 419 aattctttctggcatgatgagagtggttttttaggtatttatgatgtgctccacttcatc 478 Query: 599 aagacattgaaatatgatgttcgaattgttatgagcgttccaaaaatcaccacacatgga 658 |||||||| || |||||||||||||||| |||| | ||||| |||| || ||| ||||| Sbjct: 479 aagacattaaagtatgatgttcgaattgctatggtcattccagaaattactacaaatgga 538 Query: 659 aagaccaagaagctcagagcatataagattgaaccacctagagatgcaccagttacctgg 718 |||||||||||||| | ||| || ||||| ||| ||| |||||||||||||||| ||| Sbjct: 539 aagaccaagaagctgaaagcccatcagattcgaccgcctcgagatgcaccagttacgtgg 598 Query: 719 tacagaacaactgctctggagaagttgaggaagtatggtgcgatatatttaactccattt 778 || | |||| |||| |||||||| ||| ||||||||| || ||||||||||| |||||| Sbjct: 599 tatacaacagttgctttggagaagatgaagaagtatggagctatatatttaaccccattt 658 Query: 779 tcacaccgtttggcagaagaaattgatgatccagagcttcaaagattgagatgcagggtg 838 |||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 659 tcacaccgcctggcagaagacattgatgatccagagctccagagattgagatgcagggtg 718 Query: 839 aattatcacgctctacagtttaagccaaatatcatgaaaacaagcagtgatatagtgaat 898 ||||| || || |||| || ||||| | || ||||||||||||||||| ||||| ||| Sbjct: 719 aattaccatgcactacgattcaagcctcacataatgaaaacaagcagtgagatagtcaat 778 Query: 899 aagctccgttcagaaggccatttcatgtcaattcatcttcggtttgagctggatatgctt 958 ||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 779 aagctccgtacagaaggccatttcatgtcaattcaccttcgatttgagatggatatgctt 838 Query: 959 gcatatgccgggtgcattgacatattcgcgcctaaagaacaggaaatcctgttgaagtat 1018 |||| ||| ||||||||||| |||||| | ||| |||||||| |||| ||| | ||||| Sbjct: 839 gcatttgctgggtgcattgatatattcacacctcaagaacagaaaattctgatcaagtac 898 Query: 1019 cgggaagaaaattttgcaaataagacccttgtttacaggaaaagaaggctcattggaaag 1078 || | ||| |||||||| | ||| ||| |||| ||| ||||||||||||| || ||| Sbjct: 899 cgcaaggaacattttgcagaaaaggaacttatttatagggaaagaaggctcatcgggaag 958 Query: 1079 tgccctttaactccagaagaggtgggtcttatcatacgtgctatgggatttgataacaca 1138 ||||||||||||||||||||||| |||||||| | || | ||||||||||| || | | Sbjct: 959 tgccctttaactccagaagaggtaggtcttattcttcgatccatgggatttgacaataaa 1018 Query: 1139 acacggatttaccttgcttctggcaagctctttggtggggaacgcttcatgaagccattc 1198 ||| | || ||||||||||||||| | |||||||||||| |||| |||||||||||||| Sbjct: 1019 acaagaatctaccttgcttctggcgatctctttggtgggaaacgattcatgaagccattt 1078 Query: 1199 agggctatgtttccacgtctagaaaacaatagtatggttgggagtggaaagctggaagaa 1258 | ||||||||||||||| |||||||| | || | ||||| |||||||||||||||| Sbjct: 1079 aaggctatgtttccacgcttagaaaaccacagcactgttggtcctggaaagctggaagaa 1138 Query: 1259 gacacccgagggctagcaagggcagcagttgattacatggtctgtctcctgtcagacatt 1318 | || ||||||| || | | ||||| |||||||||||||||||||||||||||||| Sbjct: 1139 aatacaagagggctcgcgggttctgcagtggattacatggtctgtctcctgtcagacatt 1198 Query: 1319 tttatacccacatatgatggcccgagcaacttcgcaaacaacctcatgggtcatcgccta 1378 ||||| || ||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 1199 tttattcctacatatgatggcccgagcaactttgcaaacaacctaatgggccaccgccta 1258 Query: 1379 tattatggtttccgaaccacaatcacgccaaacaggaaggcccttgctccgatattcatg 1438 || ||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1259 tactatggtttccggacaacaatcacaccaaacaggaaggccctagctcccatattcatg 1318 Query: 1439 gacatggaggaagggcatgcgtctggatatgaggagaggatcaggctggtcatgttcaac 1498 |||| ||||||||| | || || | | ||||||| | |||||| ||| ||||||||| Sbjct: 1319 gacagggaggaaggtcgcgccgctcgctttgaggagcgagtcaggcaggttatgttcaac 1378 Query: 1499 acccattttggagccccccacaagcgcatccatccagagtctttctacacaaactcatgg 1558 || ||||||| | |||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 1379 acatattttggtggcccccacaagcgtgtccatccagaatctttctacacaaactcatgg 1438 Query: 1559 ccagagtgcttctgcca 1575 || |||||||||||||| Sbjct: 1439 cctgagtgcttctgcca 1455 Score = 109 bits (55), Expect = 4e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 309 tccaggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcat 368 |||||||| ||| ||| ||| |||||||||| ||||||||||||||||| ||||| |||| Sbjct: 201 tccaggatgttgatgtaaataagttgtggagaactgcagattcaaatggttggagggcat 260 Query: 369 cttctgcaccacgcacctattggcctc 395 |||||||||| |||||||||||||||| Sbjct: 261 cttctgcaccgcgcacctattggcctc 287 Score = 50.1 bits (25), Expect = 0.032 Identities = 58/69 (84%) Strand = Plus / Plus Query: 215 ccggcgcggctgtgggtcgccgtagcggcgctggtcacgggcaccatctggctctggtcc 274 |||||| ||||||||||||| || ||||||| || | |||||| ||||||||| ||| Sbjct: 89 ccggcgaggctgtgggtcgcggtgctggcgctgctcgccggcaccctctggctcttctcc 148 Query: 275 tcctcctcc 283 ||||||||| Sbjct: 149 tcctcctcc 157
>dbj|AK068263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N04, full insert sequence Length = 2005 Score = 946 bits (477), Expect = 0.0 Identities = 987/1157 (85%) Strand = Plus / Plus Query: 419 aatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgcaatatgt 478 ||||| ||||| ||||||||||||||||| |||||| ||||||||| ||||| |||||| Sbjct: 300 aatggttacttacgtgtccggtgcaatggtggcttgaaccaacaacgtagtgcgatatgt 359 Query: 479 aatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttagataca 538 |||||||||||||| |||||||| ||||||||||||||||||||||||||| | || ||| Sbjct: 360 aatgctgttgttgctgcacgaataatgaatgctacactagtgctgccagagctggacaca 419 Query: 539 aattcattctggcatgacgagagtggttttgtagatacatatgatgttccccacttcatc 598 ||||| ||||||||||| |||||||||||| ||| || |||||||| | |||||||||| Sbjct: 420 aattctttctggcatgatgagagtggttttttaggtatttatgatgtgctccacttcatc 479 Query: 599 aagacattgaaatatgatgttcgaattgttatgagcgttccaaaaatcaccacacatgga 658 |||||||| || |||||||||||||||| |||| | ||||| |||| || ||| ||||| Sbjct: 480 aagacattaaagtatgatgttcgaattgctatggtcattccagaaattactacaaatgga 539 Query: 659 aagaccaagaagctcagagcatataagattgaaccacctagagatgcaccagttacctgg 718 |||||||||||||| | ||| || ||||| ||| ||| |||||||||||||||| ||| Sbjct: 540 aagaccaagaagctgaaagcccatcagattcgaccgcctcgagatgcaccagttacgtgg 599 Query: 719 tacagaacaactgctctggagaagttgaggaagtatggtgcgatatatttaactccattt 778 || | |||| |||| |||||||| ||| ||||||||| || ||||||||||| |||||| Sbjct: 600 tatacaacagttgctttggagaagatgaagaagtatggagctatatatttaaccccattt 659 Query: 779 tcacaccgtttggcagaagaaattgatgatccagagcttcaaagattgagatgcagggtg 838 |||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 660 tcacaccgcctggcagaagacattgatgatccagagctccagagattgagatgcagggtg 719 Query: 839 aattatcacgctctacagtttaagccaaatatcatgaaaacaagcagtgatatagtgaat 898 ||||| || || |||| || ||||| | || ||||||||||||||||| ||||| ||| Sbjct: 720 aattaccatgcactacgattcaagcctcacataatgaaaacaagcagtgagatagtcaat 779 Query: 899 aagctccgttcagaaggccatttcatgtcaattcatcttcggtttgagctggatatgctt 958 ||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 780 aagctccgtacagaaggccatttcatgtcaattcaccttcgatttgagatggatatgctt 839 Query: 959 gcatatgccgggtgcattgacatattcgcgcctaaagaacaggaaatcctgttgaagtat 1018 |||| ||| ||||||||||| |||||| | ||| |||||||| |||| ||| | ||||| Sbjct: 840 gcatttgctgggtgcattgatatattcacacctcaagaacagaaaattctgatcaagtac 899 Query: 1019 cgggaagaaaattttgcaaataagacccttgtttacaggaaaagaaggctcattggaaag 1078 || | ||| |||||||| | ||| ||| |||| ||| ||||||||||||| || ||| Sbjct: 900 cgcaaggaacattttgcagaaaaggaacttatttatagggaaagaaggctcatcgggaag 959 Query: 1079 tgccctttaactccagaagaggtgggtcttatcatacgtgctatgggatttgataacaca 1138 ||||||||||||||||||||||| |||||||| | || | ||||||||||| || | | Sbjct: 960 tgccctttaactccagaagaggtaggtcttattcttcgatccatgggatttgacaataaa 1019 Query: 1139 acacggatttaccttgcttctggcaagctctttggtggggaacgcttcatgaagccattc 1198 ||| | || ||||||||||||||| | |||||||||||| |||| |||||||||||||| Sbjct: 1020 acaagaatctaccttgcttctggcgatctctttggtgggaaacgattcatgaagccattt 1079 Query: 1199 agggctatgtttccacgtctagaaaacaatagtatggttgggagtggaaagctggaagaa 1258 | ||||||||||||||| |||||||| | || | ||||| |||||||||||||||| Sbjct: 1080 aaggctatgtttccacgcttagaaaaccacagcactgttggtcctggaaagctggaagaa 1139 Query: 1259 gacacccgagggctagcaagggcagcagttgattacatggtctgtctcctgtcagacatt 1318 | || ||||||| || | | ||||| |||||||||||||||||||||||||||||| Sbjct: 1140 aatacaagagggctcgcgggttctgcagtggattacatggtctgtctcctgtcagacatt 1199 Query: 1319 tttatacccacatatgatggcccgagcaacttcgcaaacaacctcatgggtcatcgccta 1378 ||||| || ||||||||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 1200 tttattcctacatatgatggcccgagcaactttgcaaacaacctaatgggccaccgccta 1259 Query: 1379 tattatggtttccgaaccacaatcacgccaaacaggaaggcccttgctccgatattcatg 1438 || ||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1260 tactatggtttccggacaacaatcacaccaaacaggaaggccctagctcccatattcatg 1319 Query: 1439 gacatggaggaagggcatgcgtctggatatgaggagaggatcaggctggtcatgttcaac 1498 |||| ||||||||| | || || | | ||||||| | |||||| ||| ||||||||| Sbjct: 1320 gacagggaggaaggtcgcgccgctcgctttgaggagcgagtcaggcaggttatgttcaac 1379 Query: 1499 acccattttggagccccccacaagcgcatccatccagagtctttctacacaaactcatgg 1558 || ||||||| | |||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 1380 acatattttggtggcccccacaagcgtgtccatccagaatctttctacacaaactcatgg 1439 Query: 1559 ccagagtgcttctgcca 1575 || |||||||||||||| Sbjct: 1440 cctgagtgcttctgcca 1456 Score = 109 bits (55), Expect = 4e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 309 tccaggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcat 368 |||||||| ||| ||| ||| |||||||||| ||||||||||||||||| ||||| |||| Sbjct: 202 tccaggatgttgatgtaaataagttgtggagaactgcagattcaaatggttggagggcat 261 Query: 369 cttctgcaccacgcacctattggcctc 395 |||||||||| |||||||||||||||| Sbjct: 262 cttctgcaccgcgcacctattggcctc 288 Score = 50.1 bits (25), Expect = 0.032 Identities = 58/69 (84%) Strand = Plus / Plus Query: 215 ccggcgcggctgtgggtcgccgtagcggcgctggtcacgggcaccatctggctctggtcc 274 |||||| ||||||||||||| || ||||||| || | |||||| ||||||||| ||| Sbjct: 90 ccggcgaggctgtgggtcgcggtgctggcgctgctcgccggcaccctctggctcttctcc 149 Query: 275 tcctcctcc 283 ||||||||| Sbjct: 150 tcctcctcc 158
>gb|AY104203.1| Zea mays PCO148677 mRNA sequence Length = 564 Score = 747 bits (377), Expect = 0.0 Identities = 509/553 (92%) Strand = Plus / Plus Query: 432 gtgtccggtgcaatggcggcttgtcccaacaacgaagtgcaatatgtaatgctgttgttg 491 ||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||||| | Sbjct: 12 gtgtctggtgcaacggcggcttgacccaacaacgcagtgcaatatgtaatgctgttgtcg 71 Query: 492 cagcacgaatcatgaatgctacactagtgctgccagagttagatacaaattcattctggc 551 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 72 tagcacgaatcatgaatgctacactagtgctgccagagttagacacaaattcattttggc 131 Query: 552 atgacgagagtggttttgtagatacatatgatgttccccacttcatcaagacattgaaat 611 | || ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 132 acgatgagagtggttttgtagatatatatgatgttccccacttcatcaacacattgaaat 191 Query: 612 atgatgttcgaattgttatgagcgttccaaaaatcaccacacatggaaagaccaagaagc 671 |||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||| Sbjct: 192 atgatgttcgaattgtcatgagcattccaaaaatcactgcacaaggaaagaccaagaagc 251 Query: 672 tcagagcatataagattgaaccacctagagatgcaccagttacctggtacagaacaactg 731 ||| ||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 252 tcaaagcatataagattttacctcctagagatgcacccgttacttggtacagaacaactg 311 Query: 732 ctctggagaagttgaggaagtatggtgcgatatatttaactccattttcacaccgtttgg 791 || |||||| | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 312 ctttggagagactaaggaagtatggtgcaatatatttaactccattttcacaccgtttgg 371 Query: 792 cagaagaaattgatgatccagagcttcaaagattgagatgcagggtgaattatcacgctc 851 ||||| ||||||||||||||||| | || ||||||||||||||||||||||||||||| | Sbjct: 372 cagaaaaaattgatgatccagagttccagagattgagatgcagggtgaattatcacgcac 431 Query: 852 tacagtttaagccaaatatcatgaaaacaagcagtgatatagtgaataagctccgttcag 911 ||| |||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 432 tacgatttaagccaagtatcatgaaaacaagtagtgatatagcgaataagctccattcag 491 Query: 912 aaggccatttcatgtcaattcatcttcggtttgagctggatatgcttgcatatgccgggt 971 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 492 aaggccatttcatgtcaattcatcttcggtttgagctggatgtgcttgcatatgctgggt 551 Query: 972 gcattgacatatt 984 || | |||||||| Sbjct: 552 gcttcgacatatt 564
>ref|NM_001064245.1| Oryza sativa (japonica cultivar-group) Os06g0502800 (Os06g0502800) mRNA, complete cds Length = 4995 Score = 486 bits (245), Expect = e-133 Identities = 392/441 (88%) Strand = Plus / Plus Query: 396 ccccaccaactgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttgt 455 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3842 ccccaccatctgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttga 3901 Query: 456 cccaacaacgaagtgcaatatgtaatgctgttgttgcagcacgaatcatgaatgctacac 515 | |||| | |||||||||||| |||||||||||| |||||||||||||||||||| | Sbjct: 3902 gcaaacagcatagtgcaatatgtgatgctgttgttgttgcacgaatcatgaatgctacgc 3961 Query: 516 tagtgctgccagagttagatacaaattcattctggcatgacgagagtggttttgtagata 575 |||||||||||||||||| |||| ||||||||||||||| |||||||||||| |||||| Sbjct: 3962 tagtgctgccagagttagccacaagttcattctggcatgatgagagtggttttctagata 4021 Query: 576 catatgatgttccccacttcatcaagacattgaaatatgatgttcgaattgttatgagcg 635 ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4022 tatatgatgttcggcacttcatcaagacattgaaatatgatgttcagattgttatgagca 4081 Query: 636 ttccaaaaatcaccacacatggaaagaccaagaagctcagagcatataagattgaaccac 695 |||||||||||| || | ||||| |||||||| |||||||| || ||||| ||||| Sbjct: 4082 ttccaaaaatcagtgcaaagggaaataccaagaatctcagagcccatcagattctaccac 4141 Query: 696 ctagagatgcaccagttacctggtacagaacaactgctctggagaagttgaggaagtatg 755 ||||| ||||||||||||| |||||||||||| |||| |||||||| | | |||| ||| Sbjct: 4142 ctagatatgcaccagttacttggtacagaacagttgctatggagaagataaagaagcatg 4201 Query: 756 gtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatgatccagagc 815 | || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4202 gggctatatatttgactccattttcacaccgtttggcagaagaaatcgatgatccagagc 4261 Query: 816 ttcaaagattgagatgcaggg 836 | || |||||||||||||||| Sbjct: 4262 tccagagattgagatgcaggg 4282 Score = 422 bits (213), Expect = e-114 Identities = 451/531 (84%), Gaps = 12/531 (2%) Strand = Plus / Plus Query: 1059 aaagaaggctcattggaaagtgccctttaactccagaagaggtgggtcttatcatacgtg 1118 ||||||||||||||||||||| |||||||| ||||||||||||||||||| | |||||| Sbjct: 4319 aaagaaggctcattggaaagttccctttaattccagaagaggtgggtcttcttctacgtg 4378 Query: 1119 ctatgggatttgataacacaacacggatttaccttgcttctggcaagctctttggtgggg 1178 ||||||||||||| ||||||||| |||| ||||||||| || |||||||||||| ||||| Sbjct: 4379 ctatgggatttgacaacacaacaaggatctaccttgctcctagcaagctctttgctgggg 4438 Query: 1179 aacgcttcatga------agccattcagggctatgtttccacgtctagaaaacaatagta 1232 | ||| |||||| |||||||| ||| |||||||||| |||||||||| | |||| Sbjct: 4439 atcgcctcatgatcacgaagccattcgaggccatgtttccacatctagaaaaccacagta 4498 Query: 1233 tggttggg------agtggaaagctggaagaagacacccgagggctagcaagggcagcag 1286 |||||| | ||||| |||||||||| | |||| ||||||||| || | |||| Sbjct: 4499 cggttggacctggaactggaatgctggaagaaaatacccaagggctagcgtggtcggcag 4558 Query: 1287 ttgattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagca 1346 | ||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||| Sbjct: 4559 tggattacatggtctgtctcctgtcggacattttcatacccacatatgatgggccaagca 4618 Query: 1347 acttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatcacgc 1406 ||||||| |||||||||||||||||||| | || | ||||||| ||| || ||| | | Sbjct: 4619 acttcgcgcacaacctcatgggtcatcgcttgtaccacggtttccaaacgacgatcgcac 4678 Query: 1407 caaacaggaaggcccttgctccgatattcatggacatggaggaagggcatgcgtctggat 1466 || |||||||||| |||||| ||||||||| |||| ||||||||| | ||| ||||| | Sbjct: 4679 cagacaggaaggcacttgctaggatattcattgacagggaggaaggccgtgcatctggct 4738 Query: 1467 atgaggagaggatcaggctggtcatgttcaacacccattttggagccccccacaagcgca 1526 ||||||||||| |||||| | |||||||||| |||||||||| | || | ||||||| Sbjct: 4739 atgaggagagggtcaggcagctcatgttcaatgcccattttggcggtccgcggaagcgca 4798 Query: 1527 tccatccagagtctttctacacaaactcatggccagagtgcttctgccaga 1577 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4799 tccatccagagtctttctacacaaactcatggccagagtgcttctgccaga 4849
>ref|NM_001073196.1| Oryza sativa (japonica cultivar-group) Os12g0425600 (Os12g0425600) mRNA, partial cds Length = 2181 Score = 424 bits (214), Expect = e-115 Identities = 679/834 (81%) Strand = Plus / Plus Query: 748 gaagtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatga 807 ||||||||| || |||||||||||||| || |||||||| || |||||||| |||||||| Sbjct: 724 gaagtatggggctatatatttaactcctttctcacaccgcttagcagaagatattgatga 783 Query: 808 tccagagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaa 867 ||||||||| || || ||||||||| | |||||||| ||||| |||| ||||||||| | Sbjct: 784 tccagagctccagaggttgagatgccgagtgaattaccacgcactacgatttaagccaca 843 Query: 868 tatcatgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtc 927 ||||||||||| |||| ||| |||||||| ||||| || || |||||||| |||||||| Sbjct: 844 tatcatgaaaattagcaatgagatagtgaacaagctacggtctgaaggccacttcatgtc 903 Query: 928 aattcatcttcggtttgagctggatatgcttgcatatgccgggtgcattgacatattcgc 987 |||||||||||| |||||| |||| |||||||| | ||| || |||||||| ||||| | Sbjct: 904 aattcatcttcgatttgagatggacatgcttgcttttgctggatgcattgatatatttac 963 Query: 988 gcctaaagaacaggaaatcctgttgaagtatcgggaagaaaattttgcaaataagaccct 1047 || |||||||| |||| ||| | | || || ||| ||||||||||||| || | ||| Sbjct: 964 cccagaagaacagaaaattctgatcgaataccgtgaaaaaaattttgcaaagaaaatcct 1023 Query: 1048 tgtttacaggaaaagaaggctcattggaaagtgccctttaactccagaagaggtgggtct 1107 |||||||| | | ||||| |||| || |||||||| || ||||||||||||||||| || Sbjct: 1024 tgtttacaaggatagaagaatcatagggaagtgccccttgactccagaagaggtgggcct 1083 Query: 1108 tatcatacgtgctatgggatttgataacacaacacggatttaccttgcttctggcaagct 1167 |||| | ||||| || || ||||| || |||| || ||||| ||||| ||||| || | Sbjct: 1084 tatccttcgtgccattggttttgacaattcaacccgtatttatcttgcatctggtgagat 1143 Query: 1168 ctttggtggggaacgcttcatgaagccattcagggctatgtttccacgtctagaaaacaa 1227 |||||||| || || ||||||| ||||| || || |||||||| || ||||| ||| | Sbjct: 1144 atttggtggtgatcgattcatgagtccatttagagcaatgtttcctcgcctagataacca 1203 Query: 1228 tagtatggttgggagtggaaagctggaagaagacacccgagggctagcaagggcagcagt 1287 ||| ||||| || ||||||||||||| | || ||||| | || | ||||||| Sbjct: 1204 cagttcagttggacctgaaaagctggaagaaaatactcgaggcttggctggatcagcagt 1263 Query: 1288 tgattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaa 1347 ||||| ||||||||||||||||| || || || || ||||| || ||||| || ||||| Sbjct: 1264 agattatatggtctgtctcctgtcggatatcttcatgcccacgtacgatggtccaagcaa 1323 Query: 1348 cttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatcacgcc 1407 ||| ||||||||||||||||| || ||||| || ||||| |||| || ||||| || || Sbjct: 1324 ctttgcaaacaacctcatgggccaccgcctctactatggcttccagacaacaattacacc 1383 Query: 1408 aaacaggaaggcccttgctccgatattcatggacatggaggaagggcatgcgtctggata 1467 ||||||||||||||||||||| ||||||||||||| ||||||||| |||| | || | Sbjct: 1384 aaacaggaaggcccttgctccaatattcatggacagggaggaaggccatgtaaccggttt 1443 Query: 1468 tgaggagaggatcaggctggtcatgttcaacacccattttggagccccccacaagcgcat 1527 |||||| | |||||| || ||||||||||| || ||||| | || ||||||||||| Sbjct: 1444 tgaggatcgagtcaggcaagtaatgttcaacacacactttggcggtccacacaagcgcat 1503 Query: 1528 ccatccagagtctttctacacaaactcatggccagagtgcttctgccagatgaa 1581 ||||||||||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1504 tcatccagagtctttctatacaaactcatggcctgagtgcttctgccatatgaa 1557 Score = 206 bits (104), Expect = 2e-49 Identities = 277/335 (82%), Gaps = 6/335 (1%) Strand = Plus / Plus Query: 295 cggcgcctacagggtccaggattttgttgtgaatgagttgtggaggactgcagattcaaa 354 ||||| ||||||||| |||||| ||| ||||||| ||||||||| |||||| | |||||| Sbjct: 277 cggcggctacagggttcaggatgttgatgtgaataagttgtggacgactgctggttcaaa 336 Query: 355 tggctggagagcatcttctgcaccacgcacctattggcctcccccaccaactgaatctga 414 ||| ||||||||||||||||||||||| | |||||||||||||| ||| |||| || Sbjct: 337 tggttggagagcatcttctgcaccacggtcatattggcctccccctccagctgagact-- 394 Query: 415 gagcaatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgcaat 474 ||||| ||||||||||| |||||||||||||| ||| |||||| ||||||| || Sbjct: 395 ----aatggatacttgcgtgttcggtgcaatggcggattgaatcaacaaagaagtgctat 450 Query: 475 atgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttaga 534 ||||||||||||||||||||| || || |||||||||||| |||| || |||||| | || Sbjct: 451 atgtaatgctgttgttgcagctcgtataatgaatgctacattagttctaccagagcttga 510 Query: 535 tacaaattcattctggcatgacgagagtggttttgtagatacatatgatgttccccactt 594 ||||||||| ||||||| || | ||||||||| || || |||||||||||||| || Sbjct: 511 tacaaattctttctggcgggataaaagtggttttccaggtatctatgatgttccccattt 570 Query: 595 catcaagacattgaaatatgatgttcgaattgtta 629 | ||||| || ||| ||||||||| ||||||| Sbjct: 571 tctgaagactttaaaacatgatgttcatattgtta 605 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 659 aagaccaagaagctcagagcatataagattgaaccacctagagatgc 705 ||||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 635 aagactaagaagctcaaagctcataagattgtgccacctagagatgc 681
>dbj|AK105475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A05, full insert sequence Length = 2181 Score = 424 bits (214), Expect = e-115 Identities = 679/834 (81%) Strand = Plus / Plus Query: 748 gaagtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatga 807 ||||||||| || |||||||||||||| || |||||||| || |||||||| |||||||| Sbjct: 724 gaagtatggggctatatatttaactcctttctcacaccgcttagcagaagatattgatga 783 Query: 808 tccagagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaa 867 ||||||||| || || ||||||||| | |||||||| ||||| |||| ||||||||| | Sbjct: 784 tccagagctccagaggttgagatgccgagtgaattaccacgcactacgatttaagccaca 843 Query: 868 tatcatgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtc 927 ||||||||||| |||| ||| |||||||| ||||| || || |||||||| |||||||| Sbjct: 844 tatcatgaaaattagcaatgagatagtgaacaagctacggtctgaaggccacttcatgtc 903 Query: 928 aattcatcttcggtttgagctggatatgcttgcatatgccgggtgcattgacatattcgc 987 |||||||||||| |||||| |||| |||||||| | ||| || |||||||| ||||| | Sbjct: 904 aattcatcttcgatttgagatggacatgcttgcttttgctggatgcattgatatatttac 963 Query: 988 gcctaaagaacaggaaatcctgttgaagtatcgggaagaaaattttgcaaataagaccct 1047 || |||||||| |||| ||| | | || || ||| ||||||||||||| || | ||| Sbjct: 964 cccagaagaacagaaaattctgatcgaataccgtgaaaaaaattttgcaaagaaaatcct 1023 Query: 1048 tgtttacaggaaaagaaggctcattggaaagtgccctttaactccagaagaggtgggtct 1107 |||||||| | | ||||| |||| || |||||||| || ||||||||||||||||| || Sbjct: 1024 tgtttacaaggatagaagaatcatagggaagtgccccttgactccagaagaggtgggcct 1083 Query: 1108 tatcatacgtgctatgggatttgataacacaacacggatttaccttgcttctggcaagct 1167 |||| | ||||| || || ||||| || |||| || ||||| ||||| ||||| || | Sbjct: 1084 tatccttcgtgccattggttttgacaattcaacccgtatttatcttgcatctggtgagat 1143 Query: 1168 ctttggtggggaacgcttcatgaagccattcagggctatgtttccacgtctagaaaacaa 1227 |||||||| || || ||||||| ||||| || || |||||||| || ||||| ||| | Sbjct: 1144 atttggtggtgatcgattcatgagtccatttagagcaatgtttcctcgcctagataacca 1203 Query: 1228 tagtatggttgggagtggaaagctggaagaagacacccgagggctagcaagggcagcagt 1287 ||| ||||| || ||||||||||||| | || ||||| | || | ||||||| Sbjct: 1204 cagttcagttggacctgaaaagctggaagaaaatactcgaggcttggctggatcagcagt 1263 Query: 1288 tgattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaa 1347 ||||| ||||||||||||||||| || || || || ||||| || ||||| || ||||| Sbjct: 1264 agattatatggtctgtctcctgtcggatatcttcatgcccacgtacgatggtccaagcaa 1323 Query: 1348 cttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatcacgcc 1407 ||| ||||||||||||||||| || ||||| || ||||| |||| || ||||| || || Sbjct: 1324 ctttgcaaacaacctcatgggccaccgcctctactatggcttccagacaacaattacacc 1383 Query: 1408 aaacaggaaggcccttgctccgatattcatggacatggaggaagggcatgcgtctggata 1467 ||||||||||||||||||||| ||||||||||||| ||||||||| |||| | || | Sbjct: 1384 aaacaggaaggcccttgctccaatattcatggacagggaggaaggccatgtaaccggttt 1443 Query: 1468 tgaggagaggatcaggctggtcatgttcaacacccattttggagccccccacaagcgcat 1527 |||||| | |||||| || ||||||||||| || ||||| | || ||||||||||| Sbjct: 1444 tgaggatcgagtcaggcaagtaatgttcaacacacactttggcggtccacacaagcgcat 1503 Query: 1528 ccatccagagtctttctacacaaactcatggccagagtgcttctgccagatgaa 1581 ||||||||||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1504 tcatccagagtctttctatacaaactcatggcctgagtgcttctgccatatgaa 1557 Score = 206 bits (104), Expect = 2e-49 Identities = 277/335 (82%), Gaps = 6/335 (1%) Strand = Plus / Plus Query: 295 cggcgcctacagggtccaggattttgttgtgaatgagttgtggaggactgcagattcaaa 354 ||||| ||||||||| |||||| ||| ||||||| ||||||||| |||||| | |||||| Sbjct: 277 cggcggctacagggttcaggatgttgatgtgaataagttgtggacgactgctggttcaaa 336 Query: 355 tggctggagagcatcttctgcaccacgcacctattggcctcccccaccaactgaatctga 414 ||| ||||||||||||||||||||||| | |||||||||||||| ||| |||| || Sbjct: 337 tggttggagagcatcttctgcaccacggtcatattggcctccccctccagctgagact-- 394 Query: 415 gagcaatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgcaat 474 ||||| ||||||||||| |||||||||||||| ||| |||||| ||||||| || Sbjct: 395 ----aatggatacttgcgtgttcggtgcaatggcggattgaatcaacaaagaagtgctat 450 Query: 475 atgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttaga 534 ||||||||||||||||||||| || || |||||||||||| |||| || |||||| | || Sbjct: 451 atgtaatgctgttgttgcagctcgtataatgaatgctacattagttctaccagagcttga 510 Query: 535 tacaaattcattctggcatgacgagagtggttttgtagatacatatgatgttccccactt 594 ||||||||| ||||||| || | ||||||||| || || |||||||||||||| || Sbjct: 511 tacaaattctttctggcgggataaaagtggttttccaggtatctatgatgttccccattt 570 Query: 595 catcaagacattgaaatatgatgttcgaattgtta 629 | ||||| || ||| ||||||||| ||||||| Sbjct: 571 tctgaagactttaaaacatgatgttcatattgtta 605 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 659 aagaccaagaagctcagagcatataagattgaaccacctagagatgc 705 ||||| |||||||||| ||| ||||||||| |||||||||||||| Sbjct: 635 aagactaagaagctcaaagctcataagattgtgccacctagagatgc 681
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 371 bits (187), Expect = 7e-99 Identities = 388/455 (85%) Strand = Plus / Minus Query: 1121 atgggatttgataacacaacacggatttaccttgcttctggcaagctctttggtggggaa 1180 ||||||||||| || | |||| | || ||||||||||||||| | |||||||||||| || Sbjct: 143021 atgggatttgacaataaaacaagaatctaccttgcttctggcgatctctttggtgggaaa 142962 Query: 1181 cgcttcatgaagccattcagggctatgtttccacgtctagaaaacaatagtatggttggg 1240 || |||||||||||||| | ||||||||||||||| |||||||| | || | ||||| Sbjct: 142961 cgattcatgaagccatttaaggctatgtttccacgcttagaaaaccacagcactgttggt 142902 Query: 1241 agtggaaagctggaagaagacacccgagggctagcaagggcagcagttgattacatggtc 1300 |||||||||||||||| | || ||||||| || | | ||||| |||||||||||| Sbjct: 142901 cctggaaagctggaagaaaatacaagagggctcgcgggttctgcagtggattacatggtc 142842 Query: 1301 tgtctcctgtcagacatttttatacccacatatgatggcccgagcaacttcgcaaacaac 1360 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 142841 tgtctcctgtcagacatttttattcctacatatgatggcccgagcaactttgcaaacaac 142782 Query: 1361 ctcatgggtcatcgcctatattatggtttccgaaccacaatcacgccaaacaggaaggcc 1420 || ||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| Sbjct: 142781 ctaatgggccaccgcctatactatggtttccggacaacaatcacaccaaacaggaaggcc 142722 Query: 1421 cttgctccgatattcatggacatggaggaagggcatgcgtctggatatgaggagaggatc 1480 || ||||| ||||||||||||| ||||||||| | || || | | ||||||| | || Sbjct: 142721 ctagctcccatattcatggacagggaggaaggtcgcgccgctcgctttgaggagcgagtc 142662 Query: 1481 aggctggtcatgttcaacacccattttggagccccccacaagcgcatccatccagagtct 1540 |||| ||| ||||||||||| ||||||| | |||||||||||| |||||||||| ||| Sbjct: 142661 aggcaggttatgttcaacacatattttggtggcccccacaagcgtgtccatccagaatct 142602 Query: 1541 ttctacacaaactcatggccagagtgcttctgcca 1575 |||||||||||||||||||| |||||||||||||| Sbjct: 142601 ttctacacaaactcatggcctgagtgcttctgcca 142567 Score = 81.8 bits (41), Expect = 9e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 969 ggtgcattgacatattcgcgcctaaagaacaggaaatcctgttgaagtatcgggaagaaa 1028 |||||||||| |||||| | ||| |||||||| |||| ||| | ||||| || | ||| Sbjct: 143630 ggtgcattgatatattcacacctcaagaacagaaaattctgatcaagtaccgcaaggaac 143571 Query: 1029 attttgcaaataagacccttgtttacaggaaaagaaggctcattggaaagtgccctttaa 1088 |||||||| | ||| ||| |||| ||| ||||||||||||| || ||||||||||||| Sbjct: 143570 attttgcagaaaaggaacttatttatagggaaagaaggctcatcgggaagtgccctttaa 143511 Query: 1089 ctccagaagaggt 1101 ||||||||||||| Sbjct: 143510 ctccagaagaggt 143498
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 371 bits (187), Expect = 7e-99 Identities = 388/455 (85%) Strand = Plus / Minus Query: 1121 atgggatttgataacacaacacggatttaccttgcttctggcaagctctttggtggggaa 1180 ||||||||||| || | |||| | || ||||||||||||||| | |||||||||||| || Sbjct: 18341 atgggatttgacaataaaacaagaatctaccttgcttctggcgatctctttggtgggaaa 18282 Query: 1181 cgcttcatgaagccattcagggctatgtttccacgtctagaaaacaatagtatggttggg 1240 || |||||||||||||| | ||||||||||||||| |||||||| | || | ||||| Sbjct: 18281 cgattcatgaagccatttaaggctatgtttccacgcttagaaaaccacagcactgttggt 18222 Query: 1241 agtggaaagctggaagaagacacccgagggctagcaagggcagcagttgattacatggtc 1300 |||||||||||||||| | || ||||||| || | | ||||| |||||||||||| Sbjct: 18221 cctggaaagctggaagaaaatacaagagggctcgcgggttctgcagtggattacatggtc 18162 Query: 1301 tgtctcctgtcagacatttttatacccacatatgatggcccgagcaacttcgcaaacaac 1360 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 18161 tgtctcctgtcagacatttttattcctacatatgatggcccgagcaactttgcaaacaac 18102 Query: 1361 ctcatgggtcatcgcctatattatggtttccgaaccacaatcacgccaaacaggaaggcc 1420 || ||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| Sbjct: 18101 ctaatgggccaccgcctatactatggtttccggacaacaatcacaccaaacaggaaggcc 18042 Query: 1421 cttgctccgatattcatggacatggaggaagggcatgcgtctggatatgaggagaggatc 1480 || ||||| ||||||||||||| ||||||||| | || || | | ||||||| | || Sbjct: 18041 ctagctcccatattcatggacagggaggaaggtcgcgccgctcgctttgaggagcgagtc 17982 Query: 1481 aggctggtcatgttcaacacccattttggagccccccacaagcgcatccatccagagtct 1540 |||| ||| ||||||||||| ||||||| | |||||||||||| |||||||||| ||| Sbjct: 17981 aggcaggttatgttcaacacatattttggtggcccccacaagcgtgtccatccagaatct 17922 Query: 1541 ttctacacaaactcatggccagagtgcttctgcca 1575 |||||||||||||||||||| |||||||||||||| Sbjct: 17921 ttctacacaaactcatggcctgagtgcttctgcca 17887 Score = 272 bits (137), Expect = 5e-69 Identities = 239/273 (87%) Strand = Plus / Minus Query: 699 gagatgcaccagttacctggtacagaacaactgctctggagaagttgaggaagtatggtg 758 |||||||||||||||| ||||| | |||| |||| |||||||| ||| ||||||||| | Sbjct: 19639 gagatgcaccagttacgtggtatacaacagttgctttggagaagatgaagaagtatggag 19580 Query: 759 cgatatatttaactccattttcacaccgtttggcagaagaaattgatgatccagagcttc 818 | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| | Sbjct: 19579 ctatatatttaaccccattttcacaccgcctggcagaagacattgatgatccagagctcc 19520 Query: 819 aaagattgagatgcagggtgaattatcacgctctacagtttaagccaaatatcatgaaaa 878 | ||||||||||||||||||||||| || || |||| || ||||| | || ||||||| Sbjct: 19519 agagattgagatgcagggtgaattaccatgcactacgattcaagcctcacataatgaaaa 19460 Query: 879 caagcagtgatatagtgaataagctccgttcagaaggccatttcatgtcaattcatcttc 938 |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 19459 caagcagtgagatagtcaataagctccgtacagaaggccatttcatgtcaattcaccttc 19400 Query: 939 ggtttgagctggatatgcttgcatatgccgggt 971 | |||||| ||||||||||||||| ||| |||| Sbjct: 19399 gatttgagatggatatgcttgcatttgctgggt 19367 Score = 121 bits (61), Expect = 1e-23 Identities = 82/89 (92%) Strand = Plus / Minus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | Sbjct: 20965 atatgtaatgctgttgttgctgcacgaataatgaatgctacactagtgctgccagagctg 20906 Query: 533 gatacaaattcattctggcatgacgagag 561 || |||||||| ||||||||||| ||||| Sbjct: 20905 gacacaaattctttctggcatgatgagag 20877 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||| ||| |||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 21308 aggatgttgatgtaaataagttgtggagaactgcagattcaaatggttggagggcatctt 21249 Query: 372 ctgcaccacgcacctattggcctc 395 ||||||| |||||||||||||||| Sbjct: 21248 ctgcaccgcgcacctattggcctc 21225 Score = 97.6 bits (49), Expect = 2e-16 Identities = 97/113 (85%) Strand = Plus / Minus Query: 560 agtggttttgtagatacatatgatgttccccacttcatcaagacattgaaatatgatgtt 619 ||||||||| ||| || |||||||| | |||||||||||||||||| || ||||||||| Sbjct: 19868 agtggttttttaggtatttatgatgtgctccacttcatcaagacattaaagtatgatgtt 19809 Query: 620 cgaattgttatgagcgttccaaaaatcaccacacatggaaagaccaagaagct 672 ||||||| |||| | ||||| |||| || ||| ||||||||||||||||||| Sbjct: 19808 cgaattgctatggtcattccagaaattactacaaatggaaagaccaagaagct 19756 Score = 81.8 bits (41), Expect = 9e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 969 ggtgcattgacatattcgcgcctaaagaacaggaaatcctgttgaagtatcgggaagaaa 1028 |||||||||| |||||| | ||| |||||||| |||| ||| | ||||| || | ||| Sbjct: 18950 ggtgcattgatatattcacacctcaagaacagaaaattctgatcaagtaccgcaaggaac 18891 Query: 1029 attttgcaaataagacccttgtttacaggaaaagaaggctcattggaaagtgccctttaa 1088 |||||||| | ||| ||| |||| ||| ||||||||||||| || ||||||||||||| Sbjct: 18890 attttgcagaaaaggaacttatttatagggaaagaaggctcatcgggaagtgccctttaa 18831 Query: 1089 ctccagaagaggt 1101 ||||||||||||| Sbjct: 18830 ctccagaagaggt 18818 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 419 aatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgc 471 ||||| ||||| ||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 21118 aatggttacttacgtgtccggtgcaatggtggcttgaaccaacaacgtagtgc 21066 Score = 50.1 bits (25), Expect = 0.032 Identities = 58/69 (84%) Strand = Plus / Minus Query: 215 ccggcgcggctgtgggtcgccgtagcggcgctggtcacgggcaccatctggctctggtcc 274 |||||| ||||||||||||| || ||||||| || | |||||| ||||||||| ||| Sbjct: 22923 ccggcgaggctgtgggtcgcggtgctggcgctgctcgccggcaccctctggctcttctcc 22864 Query: 275 tcctcctcc 283 ||||||||| Sbjct: 22863 tcctcctcc 22855
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 371 bits (187), Expect = 7e-99 Identities = 388/455 (85%) Strand = Plus / Minus Query: 1121 atgggatttgataacacaacacggatttaccttgcttctggcaagctctttggtggggaa 1180 ||||||||||| || | |||| | || ||||||||||||||| | |||||||||||| || Sbjct: 16277906 atgggatttgacaataaaacaagaatctaccttgcttctggcgatctctttggtgggaaa 16277847 Query: 1181 cgcttcatgaagccattcagggctatgtttccacgtctagaaaacaatagtatggttggg 1240 || |||||||||||||| | ||||||||||||||| |||||||| | || | ||||| Sbjct: 16277846 cgattcatgaagccatttaaggctatgtttccacgcttagaaaaccacagcactgttggt 16277787 Query: 1241 agtggaaagctggaagaagacacccgagggctagcaagggcagcagttgattacatggtc 1300 |||||||||||||||| | || ||||||| || | | ||||| |||||||||||| Sbjct: 16277786 cctggaaagctggaagaaaatacaagagggctcgcgggttctgcagtggattacatggtc 16277727 Query: 1301 tgtctcctgtcagacatttttatacccacatatgatggcccgagcaacttcgcaaacaac 1360 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 16277726 tgtctcctgtcagacatttttattcctacatatgatggcccgagcaactttgcaaacaac 16277667 Query: 1361 ctcatgggtcatcgcctatattatggtttccgaaccacaatcacgccaaacaggaaggcc 1420 || ||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| Sbjct: 16277666 ctaatgggccaccgcctatactatggtttccggacaacaatcacaccaaacaggaaggcc 16277607 Query: 1421 cttgctccgatattcatggacatggaggaagggcatgcgtctggatatgaggagaggatc 1480 || ||||| ||||||||||||| ||||||||| | || || | | ||||||| | || Sbjct: 16277606 ctagctcccatattcatggacagggaggaaggtcgcgccgctcgctttgaggagcgagtc 16277547 Query: 1481 aggctggtcatgttcaacacccattttggagccccccacaagcgcatccatccagagtct 1540 |||| ||| ||||||||||| ||||||| | |||||||||||| |||||||||| ||| Sbjct: 16277546 aggcaggttatgttcaacacatattttggtggcccccacaagcgtgtccatccagaatct 16277487 Query: 1541 ttctacacaaactcatggccagagtgcttctgcca 1575 |||||||||||||||||||| |||||||||||||| Sbjct: 16277486 ttctacacaaactcatggcctgagtgcttctgcca 16277452 Score = 272 bits (137), Expect = 5e-69 Identities = 239/273 (87%) Strand = Plus / Minus Query: 699 gagatgcaccagttacctggtacagaacaactgctctggagaagttgaggaagtatggtg 758 |||||||||||||||| ||||| | |||| |||| |||||||| ||| ||||||||| | Sbjct: 16279204 gagatgcaccagttacgtggtatacaacagttgctttggagaagatgaagaagtatggag 16279145 Query: 759 cgatatatttaactccattttcacaccgtttggcagaagaaattgatgatccagagcttc 818 | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| | Sbjct: 16279144 ctatatatttaaccccattttcacaccgcctggcagaagacattgatgatccagagctcc 16279085 Query: 819 aaagattgagatgcagggtgaattatcacgctctacagtttaagccaaatatcatgaaaa 878 | ||||||||||||||||||||||| || || |||| || ||||| | || ||||||| Sbjct: 16279084 agagattgagatgcagggtgaattaccatgcactacgattcaagcctcacataatgaaaa 16279025 Query: 879 caagcagtgatatagtgaataagctccgttcagaaggccatttcatgtcaattcatcttc 938 |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 16279024 caagcagtgagatagtcaataagctccgtacagaaggccatttcatgtcaattcaccttc 16278965 Query: 939 ggtttgagctggatatgcttgcatatgccgggt 971 | |||||| ||||||||||||||| ||| |||| Sbjct: 16278964 gatttgagatggatatgcttgcatttgctgggt 16278932 Score = 121 bits (61), Expect = 1e-23 Identities = 82/89 (92%) Strand = Plus / Minus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | Sbjct: 16280530 atatgtaatgctgttgttgctgcacgaataatgaatgctacactagtgctgccagagctg 16280471 Query: 533 gatacaaattcattctggcatgacgagag 561 || |||||||| ||||||||||| ||||| Sbjct: 16280470 gacacaaattctttctggcatgatgagag 16280442 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||| ||| |||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 16280873 aggatgttgatgtaaataagttgtggagaactgcagattcaaatggttggagggcatctt 16280814 Query: 372 ctgcaccacgcacctattggcctc 395 ||||||| |||||||||||||||| Sbjct: 16280813 ctgcaccgcgcacctattggcctc 16280790 Score = 97.6 bits (49), Expect = 2e-16 Identities = 97/113 (85%) Strand = Plus / Minus Query: 560 agtggttttgtagatacatatgatgttccccacttcatcaagacattgaaatatgatgtt 619 ||||||||| ||| || |||||||| | |||||||||||||||||| || ||||||||| Sbjct: 16279433 agtggttttttaggtatttatgatgtgctccacttcatcaagacattaaagtatgatgtt 16279374 Query: 620 cgaattgttatgagcgttccaaaaatcaccacacatggaaagaccaagaagct 672 ||||||| |||| | ||||| |||| || ||| ||||||||||||||||||| Sbjct: 16279373 cgaattgctatggtcattccagaaattactacaaatggaaagaccaagaagct 16279321 Score = 81.8 bits (41), Expect = 9e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 969 ggtgcattgacatattcgcgcctaaagaacaggaaatcctgttgaagtatcgggaagaaa 1028 |||||||||| |||||| | ||| |||||||| |||| ||| | ||||| || | ||| Sbjct: 16278515 ggtgcattgatatattcacacctcaagaacagaaaattctgatcaagtaccgcaaggaac 16278456 Query: 1029 attttgcaaataagacccttgtttacaggaaaagaaggctcattggaaagtgccctttaa 1088 |||||||| | ||| ||| |||| ||| ||||||||||||| || ||||||||||||| Sbjct: 16278455 attttgcagaaaaggaacttatttatagggaaagaaggctcatcgggaagtgccctttaa 16278396 Query: 1089 ctccagaagaggt 1101 ||||||||||||| Sbjct: 16278395 ctccagaagaggt 16278383 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 419 aatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgc 471 ||||| ||||| ||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 16280683 aatggttacttacgtgtccggtgcaatggtggcttgaaccaacaacgtagtgc 16280631 Score = 50.1 bits (25), Expect = 0.032 Identities = 58/69 (84%) Strand = Plus / Minus Query: 215 ccggcgcggctgtgggtcgccgtagcggcgctggtcacgggcaccatctggctctggtcc 274 |||||| ||||||||||||| || ||||||| || | |||||| ||||||||| ||| Sbjct: 16282488 ccggcgaggctgtgggtcgcggtgctggcgctgctcgccggcaccctctggctcttctcc 16282429 Query: 275 tcctcctcc 283 ||||||||| Sbjct: 16282428 tcctcctcc 16282420
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 361 bits (182), Expect = 6e-96 Identities = 414/492 (84%), Gaps = 12/492 (2%) Strand = Plus / Minus Query: 1098 aggtgggtcttatcatacgtgctatgggatttgataacacaacacggatttaccttgctt 1157 ||||||||||| | ||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct: 17580111 aggtgggtcttcttctacgtgctatgggatttgacaacacaacaaggatctaccttgctc 17580052 Query: 1158 ctggcaagctctttggtggggaacgcttcatga------agccattcagggctatgtttc 1211 || |||||||||||| |||||| ||| |||||| |||||||| ||| ||||||| Sbjct: 17580051 ctagcaagctctttgctggggatcgcctcatgatcacgaagccattcgaggccatgtttc 17579992 Query: 1212 cacgtctagaaaacaatagtatggttggg------agtggaaagctggaagaagacaccc 1265 ||| |||||||||| | |||| |||||| | ||||| |||||||||| | |||| Sbjct: 17579991 cacatctagaaaaccacagtacggttggacctggaactggaatgctggaagaaaataccc 17579932 Query: 1266 gagggctagcaagggcagcagttgattacatggtctgtctcctgtcagacatttttatac 1325 ||||||||| || | ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 17579931 aagggctagcgtggtcggcagtggattacatggtctgtctcctgtcggacattttcatac 17579872 Query: 1326 ccacatatgatggcccgagcaacttcgcaaacaacctcatgggtcatcgcctatattatg 1385 ||||||||||||| || ||||||||||| |||||||||||||||||||| | || | | Sbjct: 17579871 ccacatatgatgggccaagcaacttcgcgcacaacctcatgggtcatcgcttgtaccacg 17579812 Query: 1386 gtttccgaaccacaatcacgccaaacaggaaggcccttgctccgatattcatggacatgg 1445 |||||| ||| || ||| | ||| |||||||||| |||||| ||||||||| |||| || Sbjct: 17579811 gtttccaaacgacgatcgcaccagacaggaaggcacttgctaggatattcattgacaggg 17579752 Query: 1446 aggaagggcatgcgtctggatatgaggagaggatcaggctggtcatgttcaacacccatt 1505 ||||||| | ||| ||||| |||||||||||| |||||| | |||||||||| |||||| Sbjct: 17579751 aggaaggccgtgcatctggctatgaggagagggtcaggcagctcatgttcaatgcccatt 17579692 Query: 1506 ttggagccccccacaagcgcatccatccagagtctttctacacaaactcatggccagagt 1565 |||| | || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17579691 ttggcggtccgcggaagcgcatccatccagagtctttctacacaaactcatggccagagt 17579632 Query: 1566 gcttctgccaga 1577 |||||||||||| Sbjct: 17579631 gcttctgccaga 17579620 Score = 325 bits (164), Expect = 4e-85 Identities = 239/264 (90%) Strand = Plus / Minus Query: 691 accacctagagatgcaccagttacctggtacagaacaactgctctggagaagttgaggaa 750 |||||||||| ||||||||||||| |||||||||||| |||| |||||||| | | ||| Sbjct: 17581304 accacctagatatgcaccagttacttggtacagaacagttgctatggagaagataaagaa 17581245 Query: 751 gtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatgatcc 810 | |||| || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 17581244 gcatggggctatatatttgactccattttcacaccgtttggcagaagaaatcgatgatcc 17581185 Query: 811 agagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaatat 870 |||||| || |||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 17581184 agagctccagagattgagatgcagggtgaattatcatgcactacgatttaagccaaatat 17581125 Query: 871 catgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtcaat 930 |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| Sbjct: 17581124 catgaaaacaagcagtgagatagttaataagctccactcagaaggccatttcatgtcaat 17581065 Query: 931 tcatcttcggtttgagctggatat 954 ||||| | |||||||||||||||| Sbjct: 17581064 tcatccttggtttgagctggatat 17581041 Score = 125 bits (63), Expect = 7e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 560 agtggttttgtagatacatatgatgttccccacttcatcaagacattgaaatatgatgtt 619 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 17581540 agtggttttctagatatatatgatgttcggcacttcatcaagacattgaaatatgatgtt 17581481 Query: 620 cgaattgttatgagcgttccaaaaatcaccacacatggaaagaccaagaagctcagagc 678 | |||||||||||| |||||||||||| || | ||||| |||||||| |||||||| Sbjct: 17581480 cagattgttatgagcattccaaaaatcagtgcaaagggaaataccaagaatctcagagc 17581422 Score = 113 bits (57), Expect = 3e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 17583315 atatgtgatgctgttgttgttgcacgaatcatgaatgctacgctagtgctgccagagtta 17583256 Query: 533 gatacaaattcattctggcatgacgagag 561 | |||| ||||||||||||||| ||||| Sbjct: 17583255 gccacaagttcattctggcatgatgagag 17583227 Score = 109 bits (55), Expect = 4e-20 Identities = 58/59 (98%) Strand = Plus / Minus Query: 396 ccccaccaactgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttg 454 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17583507 ccccaccatctgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttg 17583449 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||| ||| |||||||||| |||||| |||||||||| ||||||||||||| Sbjct: 17583692 aggatgttgatgtaaataagttgtggagaactgcatattcaaatggttggagagcatctt 17583633 Query: 372 ctgcaccacgcacctattggcctc 395 |||||||||| ||||||||||||| Sbjct: 17583632 ctgcaccacgtacctattggcctc 17583609 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1059 aaagaaggctcattggaaagtgccctttaactccagaagaggt 1101 ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 17580589 aaagaaggctcattggaaagttccctttaattccagaagaggt 17580547 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/76 (85%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 174 ggggcctcggcagcgagacgttgctgcgccggcaccgcgcaccggcgcggctgtgggtcg 233 ||||||| ||||||||| ||||||||| ||||||| | ||||||| |||| ||||||| Sbjct: 17586414 ggggccttggcagcgaggcgttgctgc--cggcaccacaaaccggcggggctatgggtcg 17586357 Query: 234 ccgtagcggcgctggt 249 |||| |||| |||||| Sbjct: 17586356 ccgtggcggtgctggt 17586341
>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0564B04 Length = 64684 Score = 361 bits (182), Expect = 6e-96 Identities = 414/492 (84%), Gaps = 12/492 (2%) Strand = Plus / Minus Query: 1098 aggtgggtcttatcatacgtgctatgggatttgataacacaacacggatttaccttgctt 1157 ||||||||||| | ||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct: 6459 aggtgggtcttcttctacgtgctatgggatttgacaacacaacaaggatctaccttgctc 6400 Query: 1158 ctggcaagctctttggtggggaacgcttcatga------agccattcagggctatgtttc 1211 || |||||||||||| |||||| ||| |||||| |||||||| ||| ||||||| Sbjct: 6399 ctagcaagctctttgctggggatcgcctcatgatcacgaagccattcgaggccatgtttc 6340 Query: 1212 cacgtctagaaaacaatagtatggttggg------agtggaaagctggaagaagacaccc 1265 ||| |||||||||| | |||| |||||| | ||||| |||||||||| | |||| Sbjct: 6339 cacatctagaaaaccacagtacggttggacctggaactggaatgctggaagaaaataccc 6280 Query: 1266 gagggctagcaagggcagcagttgattacatggtctgtctcctgtcagacatttttatac 1325 ||||||||| || | ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 6279 aagggctagcgtggtcggcagtggattacatggtctgtctcctgtcggacattttcatac 6220 Query: 1326 ccacatatgatggcccgagcaacttcgcaaacaacctcatgggtcatcgcctatattatg 1385 ||||||||||||| || ||||||||||| |||||||||||||||||||| | || | | Sbjct: 6219 ccacatatgatgggccaagcaacttcgcgcacaacctcatgggtcatcgcttgtaccacg 6160 Query: 1386 gtttccgaaccacaatcacgccaaacaggaaggcccttgctccgatattcatggacatgg 1445 |||||| ||| || ||| | ||| |||||||||| |||||| ||||||||| |||| || Sbjct: 6159 gtttccaaacgacgatcgcaccagacaggaaggcacttgctaggatattcattgacaggg 6100 Query: 1446 aggaagggcatgcgtctggatatgaggagaggatcaggctggtcatgttcaacacccatt 1505 ||||||| | ||| ||||| |||||||||||| |||||| | |||||||||| |||||| Sbjct: 6099 aggaaggccgtgcatctggctatgaggagagggtcaggcagctcatgttcaatgcccatt 6040 Query: 1506 ttggagccccccacaagcgcatccatccagagtctttctacacaaactcatggccagagt 1565 |||| | || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6039 ttggcggtccgcggaagcgcatccatccagagtctttctacacaaactcatggccagagt 5980 Query: 1566 gcttctgccaga 1577 |||||||||||| Sbjct: 5979 gcttctgccaga 5968 Score = 325 bits (164), Expect = 4e-85 Identities = 239/264 (90%) Strand = Plus / Minus Query: 691 accacctagagatgcaccagttacctggtacagaacaactgctctggagaagttgaggaa 750 |||||||||| ||||||||||||| |||||||||||| |||| |||||||| | | ||| Sbjct: 7652 accacctagatatgcaccagttacttggtacagaacagttgctatggagaagataaagaa 7593 Query: 751 gtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatgatcc 810 | |||| || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 7592 gcatggggctatatatttgactccattttcacaccgtttggcagaagaaatcgatgatcc 7533 Query: 811 agagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaatat 870 |||||| || |||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 7532 agagctccagagattgagatgcagggtgaattatcatgcactacgatttaagccaaatat 7473 Query: 871 catgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtcaat 930 |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| Sbjct: 7472 catgaaaacaagcagtgagatagttaataagctccactcagaaggccatttcatgtcaat 7413 Query: 931 tcatcttcggtttgagctggatat 954 ||||| | |||||||||||||||| Sbjct: 7412 tcatccttggtttgagctggatat 7389 Score = 125 bits (63), Expect = 7e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 560 agtggttttgtagatacatatgatgttccccacttcatcaagacattgaaatatgatgtt 619 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 7888 agtggttttctagatatatatgatgttcggcacttcatcaagacattgaaatatgatgtt 7829 Query: 620 cgaattgttatgagcgttccaaaaatcaccacacatggaaagaccaagaagctcagagc 678 | |||||||||||| |||||||||||| || | ||||| |||||||| |||||||| Sbjct: 7828 cagattgttatgagcattccaaaaatcagtgcaaagggaaataccaagaatctcagagc 7770 Score = 113 bits (57), Expect = 3e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 9663 atatgtgatgctgttgttgttgcacgaatcatgaatgctacgctagtgctgccagagtta 9604 Query: 533 gatacaaattcattctggcatgacgagag 561 | |||| ||||||||||||||| ||||| Sbjct: 9603 gccacaagttcattctggcatgatgagag 9575 Score = 109 bits (55), Expect = 4e-20 Identities = 58/59 (98%) Strand = Plus / Minus Query: 396 ccccaccaactgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttg 454 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9855 ccccaccatctgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttg 9797 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||| ||| |||||||||| |||||| |||||||||| ||||||||||||| Sbjct: 10040 aggatgttgatgtaaataagttgtggagaactgcatattcaaatggttggagagcatctt 9981 Query: 372 ctgcaccacgcacctattggcctc 395 |||||||||| ||||||||||||| Sbjct: 9980 ctgcaccacgtacctattggcctc 9957 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1059 aaagaaggctcattggaaagtgccctttaactccagaagaggt 1101 ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 6937 aaagaaggctcattggaaagttccctttaattccagaagaggt 6895 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/76 (85%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 174 ggggcctcggcagcgagacgttgctgcgccggcaccgcgcaccggcgcggctgtgggtcg 233 ||||||| ||||||||| ||||||||| ||||||| | ||||||| |||| ||||||| Sbjct: 12762 ggggccttggcagcgaggcgttgctgc--cggcaccacaaaccggcggggctatgggtcg 12705 Query: 234 ccgtagcggcgctggt 249 |||| |||| |||||| Sbjct: 12704 ccgtggcggtgctggt 12689
>dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075M17 Length = 91422 Score = 361 bits (182), Expect = 6e-96 Identities = 414/492 (84%), Gaps = 12/492 (2%) Strand = Plus / Minus Query: 1098 aggtgggtcttatcatacgtgctatgggatttgataacacaacacggatttaccttgctt 1157 ||||||||||| | ||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct: 84557 aggtgggtcttcttctacgtgctatgggatttgacaacacaacaaggatctaccttgctc 84498 Query: 1158 ctggcaagctctttggtggggaacgcttcatga------agccattcagggctatgtttc 1211 || |||||||||||| |||||| ||| |||||| |||||||| ||| ||||||| Sbjct: 84497 ctagcaagctctttgctggggatcgcctcatgatcacgaagccattcgaggccatgtttc 84438 Query: 1212 cacgtctagaaaacaatagtatggttggg------agtggaaagctggaagaagacaccc 1265 ||| |||||||||| | |||| |||||| | ||||| |||||||||| | |||| Sbjct: 84437 cacatctagaaaaccacagtacggttggacctggaactggaatgctggaagaaaataccc 84378 Query: 1266 gagggctagcaagggcagcagttgattacatggtctgtctcctgtcagacatttttatac 1325 ||||||||| || | ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 84377 aagggctagcgtggtcggcagtggattacatggtctgtctcctgtcggacattttcatac 84318 Query: 1326 ccacatatgatggcccgagcaacttcgcaaacaacctcatgggtcatcgcctatattatg 1385 ||||||||||||| || ||||||||||| |||||||||||||||||||| | || | | Sbjct: 84317 ccacatatgatgggccaagcaacttcgcgcacaacctcatgggtcatcgcttgtaccacg 84258 Query: 1386 gtttccgaaccacaatcacgccaaacaggaaggcccttgctccgatattcatggacatgg 1445 |||||| ||| || ||| | ||| |||||||||| |||||| ||||||||| |||| || Sbjct: 84257 gtttccaaacgacgatcgcaccagacaggaaggcacttgctaggatattcattgacaggg 84198 Query: 1446 aggaagggcatgcgtctggatatgaggagaggatcaggctggtcatgttcaacacccatt 1505 ||||||| | ||| ||||| |||||||||||| |||||| | |||||||||| |||||| Sbjct: 84197 aggaaggccgtgcatctggctatgaggagagggtcaggcagctcatgttcaatgcccatt 84138 Query: 1506 ttggagccccccacaagcgcatccatccagagtctttctacacaaactcatggccagagt 1565 |||| | || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84137 ttggcggtccgcggaagcgcatccatccagagtctttctacacaaactcatggccagagt 84078 Query: 1566 gcttctgccaga 1577 |||||||||||| Sbjct: 84077 gcttctgccaga 84066 Score = 325 bits (164), Expect = 4e-85 Identities = 239/264 (90%) Strand = Plus / Minus Query: 691 accacctagagatgcaccagttacctggtacagaacaactgctctggagaagttgaggaa 750 |||||||||| ||||||||||||| |||||||||||| |||| |||||||| | | ||| Sbjct: 85750 accacctagatatgcaccagttacttggtacagaacagttgctatggagaagataaagaa 85691 Query: 751 gtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatgatcc 810 | |||| || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 85690 gcatggggctatatatttgactccattttcacaccgtttggcagaagaaatcgatgatcc 85631 Query: 811 agagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaatat 870 |||||| || |||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 85630 agagctccagagattgagatgcagggtgaattatcatgcactacgatttaagccaaatat 85571 Query: 871 catgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtcaat 930 |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| Sbjct: 85570 catgaaaacaagcagtgagatagttaataagctccactcagaaggccatttcatgtcaat 85511 Query: 931 tcatcttcggtttgagctggatat 954 ||||| | |||||||||||||||| Sbjct: 85510 tcatccttggtttgagctggatat 85487 Score = 125 bits (63), Expect = 7e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 560 agtggttttgtagatacatatgatgttccccacttcatcaagacattgaaatatgatgtt 619 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 85986 agtggttttctagatatatatgatgttcggcacttcatcaagacattgaaatatgatgtt 85927 Query: 620 cgaattgttatgagcgttccaaaaatcaccacacatggaaagaccaagaagctcagagc 678 | |||||||||||| |||||||||||| || | ||||| |||||||| |||||||| Sbjct: 85926 cagattgttatgagcattccaaaaatcagtgcaaagggaaataccaagaatctcagagc 85868 Score = 113 bits (57), Expect = 3e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 87761 atatgtgatgctgttgttgttgcacgaatcatgaatgctacgctagtgctgccagagtta 87702 Query: 533 gatacaaattcattctggcatgacgagag 561 | |||| ||||||||||||||| ||||| Sbjct: 87701 gccacaagttcattctggcatgatgagag 87673 Score = 109 bits (55), Expect = 4e-20 Identities = 58/59 (98%) Strand = Plus / Minus Query: 396 ccccaccaactgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttg 454 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87953 ccccaccatctgaatctgagagcaatgggtacttgcgtgtccggtgcaatggcggcttg 87895 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||| ||| |||||||||| |||||| |||||||||| ||||||||||||| Sbjct: 88138 aggatgttgatgtaaataagttgtggagaactgcatattcaaatggttggagagcatctt 88079 Query: 372 ctgcaccacgcacctattggcctc 395 |||||||||| ||||||||||||| Sbjct: 88078 ctgcaccacgtacctattggcctc 88055 Score = 69.9 bits (35), Expect = 3e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 1059 aaagaaggctcattggaaagtgccctttaactccagaagaggt 1101 ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 85035 aaagaaggctcattggaaagttccctttaattccagaagaggt 84993 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/76 (85%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 174 ggggcctcggcagcgagacgttgctgcgccggcaccgcgcaccggcgcggctgtgggtcg 233 ||||||| ||||||||| ||||||||| ||||||| | ||||||| |||| ||||||| Sbjct: 90860 ggggccttggcagcgaggcgttgctgc--cggcaccacaaaccggcggggctatgggtcg 90803 Query: 234 ccgtagcggcgctggt 249 |||| |||| |||||| Sbjct: 90802 ccgtggcggtgctggt 90787
>gb|AY109119.2| Zea mays PCO100556 mRNA sequence Length = 583 Score = 307 bits (155), Expect = 8e-80 Identities = 269/307 (87%) Strand = Plus / Plus Query: 730 tgctctggagaagttgaggaagtatggtgcgatatatttaactccattttcacaccgttt 789 |||| |||||| | ||| ||||||||| || |||||||||| |||||||||||||||||| Sbjct: 251 tgctttggagacgatgaagaagtatggagctatatatttaagtccattttcacaccgttt 310 Query: 790 ggcagaagaaattgatgatccagagcttcaaagattgagatgcagggtgaattatcacgc 849 ||||||||| |||||| |||||||||| || |||||||||||||| |||||||| || || Sbjct: 311 ggcagaagatattgataatccagagctccagagattgagatgcagagtgaattaccatgc 370 Query: 850 tctacagtttaagccaaatatcatgaaaacaagcagtgatatagtgaataagctccgttc 909 |||| || ||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 371 actacgattcaagccaaatatcatgaaaacaagcagtgagatagtgaacaagctccgctc 430 Query: 910 agaaggccatttcatgtcaattcatcttcggtttgagctggatatgcttgcatatgccgg 969 |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| || Sbjct: 431 agaaggccatttcatgtcaattcatcttcgatttgagttggatatgcttgcatttgcagg 490 Query: 970 gtgcattgacatattcgcgcctaaagaacaggaaatcctgttgaagtatcgggaagaaaa 1029 |||| ||||||||||| ||| |||| || |||| |||| |||||| |||||||| | Sbjct: 491 gtgctttgacatattcaaacctcaagagcaaaaaattctgtggaagtacagggaagaaca 550 Query: 1030 ttttgca 1036 ||||||| Sbjct: 551 ttttgca 557 Score = 226 bits (114), Expect = 2e-55 Identities = 174/194 (89%) Strand = Plus / Plus Query: 481 tgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttagatacaaa 540 |||||||||||| ||||| ||||||||||||||||| ||||||||| | ||||| ||||| Sbjct: 2 tgctgttgttgctgcacggatcatgaatgctacactggtgctgccaaaattagacacaaa 61 Query: 541 ttcattctggcatgacgagagtggttttgtagatacatatgatgttccccacttcatcaa 600 ||||||||||||||| || ||||| ||||||| || ||||||||||||||||||||||| Sbjct: 62 ttcattctggcatgatgaaagtggctttgtaggtatttatgatgttccccacttcatcaa 121 Query: 601 gacattgaaatatgatgttcgaattgttatgagcgttccaaaaatcaccacacatggaaa 660 |||| |||||||||| || ||||||||||||||| |||| ||||||| ||| ||||||| Sbjct: 122 gacactgaaatatgacgtccgaattgttatgagcattcctgaaatcactacaaatggaaa 181 Query: 661 gaccaagaagctca 674 |||||||||||||| Sbjct: 182 gaccaagaagctca 195
>gb|BT017734.1| Zea mays clone EL01N0448G12.c mRNA sequence Length = 1162 Score = 283 bits (143), Expect = 1e-72 Identities = 320/379 (84%) Strand = Plus / Plus Query: 1064 aggctcattggaaagtgccctttaactccagaagaggtgggtcttatcatacgtgctatg 1123 ||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||| ||| Sbjct: 17 aggctcaaaggaaagtgccctttaactccagaagaggtaggttttattctacgtgccatg 76 Query: 1124 ggatttgataacacaacacggatttaccttgcttctggcaagctctttggtggggaacgc 1183 |||||||| || | |||||| ||||||||||| |||||| |||||||||| ||| |||| Sbjct: 77 ggatttgacaatagaacacgcatttaccttgcctctggcgagctctttggagggaaacgt 136 Query: 1184 ttcatgaagccattcagggctatgtttccacgtctagaaaacaatagtatggttgggagt 1243 |||||||||||||||| | | ||||||||||| |||| ||| | || | ||||| | Sbjct: 137 ttcatgaagccattcaagaccatgtttccacgcttagagaaccacagcacagttggacct 196 Query: 1244 ggaaagctggaagaagacacccgagggctagcaagggcagcagttgattacatggtctgt 1303 |||||||||||||| | |||| |||||||||| | |||||||||| |||||||| || Sbjct: 197 ggaaagctggaagagaatacccaagggctagcaggatcagcagttgactacatggtttgc 256 Query: 1304 ctcctgtcagacatttttatacccacatatgatggcccgagcaacttcgcaaacaacctc 1363 |||||||| |||||||| || ||||||||||||||||| |||||||| |||||||||||| Sbjct: 257 ctcctgtctgacattttcatgcccacatatgatggcccaagcaactttgcaaacaacctc 316 Query: 1364 atgggtcatcgcctatattatggtttccgaaccacaatcacgccaaacaggaaggccctt 1423 ||||| || || | || || |||||||| |||||||||||||| ||||| ||||| ||| Sbjct: 317 atgggccaccgtatgtactacggtttccggaccacaatcacgccgaacagaaaggctctt 376 Query: 1424 gctccgatattcatggaca 1442 || |||||| |||| |||| Sbjct: 377 gccccgatactcatcgaca 395 Score = 147 bits (74), Expect = 2e-31 Identities = 152/178 (85%) Strand = Plus / Plus Query: 1472 gagaggatcaggctggtcatgttcaacacccattttggagccccccacaagcgcatccat 1531 ||||| |||||| ||| |||| ||||||||||||||| ||||||||||||||| ||||| Sbjct: 422 gagagaatcaggagggtgatgtccaacacccattttggtgccccccacaagcgcgtccat 481 Query: 1532 ccagagtctttctacacaaactcatggccagagtgcttctgccagatgaatgctaggaat 1591 ||||||||||||||||| ||||||||||| |||||||||||||||| | |||| | ||| Sbjct: 482 ccagagtctttctacacgaactcatggcctgagtgcttctgccagacggatgccaagaac 541 Query: 1592 caagctgaccggtgcccgcccgacaatgtaaatgatgtccttgaaagtcagttccaga 1649 || || |||||||| || || || || ||||||| || || ||||| |||||||||| Sbjct: 542 catgcagaccggtgtccccctgataacataaatgacgttctggaaagccagttccaga 599
>gb|AY106253.1| Zea mays PCO096155 mRNA sequence Length = 1091 Score = 283 bits (143), Expect = 1e-72 Identities = 320/379 (84%) Strand = Plus / Plus Query: 1064 aggctcattggaaagtgccctttaactccagaagaggtgggtcttatcatacgtgctatg 1123 ||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||| ||| Sbjct: 64 aggctcaaaggaaagtgccctttaactccagaagaggtaggttttattctacgtgccatg 123 Query: 1124 ggatttgataacacaacacggatttaccttgcttctggcaagctctttggtggggaacgc 1183 |||||||| || | |||||| ||||||||||| |||||| |||||||||| ||| |||| Sbjct: 124 ggatttgacaatagaacacgcatttaccttgcctctggcgagctctttggagggaaacgt 183 Query: 1184 ttcatgaagccattcagggctatgtttccacgtctagaaaacaatagtatggttgggagt 1243 |||||||||||||||| | | ||||||||||| |||| ||| | || | ||||| | Sbjct: 184 ttcatgaagccattcaagaccatgtttccacgcttagagaaccacagcacagttggacct 243 Query: 1244 ggaaagctggaagaagacacccgagggctagcaagggcagcagttgattacatggtctgt 1303 |||||||||||||| | |||| |||||||||| | |||||||||| |||||||| || Sbjct: 244 ggaaagctggaagagaatacccaagggctagcaggatcagcagttgactacatggtttgc 303 Query: 1304 ctcctgtcagacatttttatacccacatatgatggcccgagcaacttcgcaaacaacctc 1363 |||||||| |||||||| || ||||||||||||||||| |||||||| |||||||||||| Sbjct: 304 ctcctgtctgacattttcatgcccacatatgatggcccaagcaactttgcaaacaacctc 363 Query: 1364 atgggtcatcgcctatattatggtttccgaaccacaatcacgccaaacaggaaggccctt 1423 ||||| || || | || || |||||||| |||||||||||||| ||||| ||||| ||| Sbjct: 364 atgggccaccgtatgtactacggtttccggaccacaatcacgccgaacagaaaggctctt 423 Query: 1424 gctccgatattcatggaca 1442 || |||||| |||| |||| Sbjct: 424 gccccgatactcatcgaca 442 Score = 139 bits (70), Expect = 4e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 1472 gagaggatcaggctggtcatgttcaacacccattttggagccccccacaagcgcatccat 1531 ||||| |||||| ||| |||| ||||||||||||||| ||||||||||||||| ||||| Sbjct: 469 gagagaatcaggagggtgatgtccaacacccattttggtgccccccacaagcgcgtccat 528 Query: 1532 ccagagtctttctacacaaactcatggccagagtgcttctgccaga 1577 ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 529 ccagagtctttctacacgaactcatggcctgagtgcttctgccaga 574
>gb|AY111274.1| Zea mays CL15198_1 mRNA sequence Length = 682 Score = 244 bits (123), Expect = 1e-60 Identities = 218/251 (86%), Gaps = 3/251 (1%) Strand = Plus / Minus Query: 1417 ggcccttgctccgatattcatggacatggaggaagggcatgcgtctggatatgaggagag 1476 ||||||||||| |||||||||||||| |||||||||||| | |||| || ||||||||| Sbjct: 680 ggcccttgctcggatattcatggacagggaggaagggcacacatctgcatttgaggagag 621 Query: 1477 gatcaggctggtcatgttcaacacccattttggagccccccacaagcgcatccatccaga 1536 | |||||| ||||||| ||| |||||| ||| | ||||||||||||||||||| Sbjct: 620 ggtcaggcaggtcatgctca---cccattctggcgnnnnnnacaagcgcatccatccaga 564 Query: 1537 gtctttctacacaaactcatggccagagtgcttctgccagatgaatgctaggaatcaagc 1596 |||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||| || Sbjct: 563 gtctttctacacaaacccatggacagagtgcttctgccagacgaaagctaggaatcatgc 504 Query: 1597 tgaccggtgcccgcccgacaatgtaaatgatgtccttgaaagtcagttccagaataaaga 1656 |||||||||||| | | ||| |||||||||||||||||||||| |||||| |||||||| Sbjct: 503 tgaccggtgcccacacaacagtgtaaatgatgtccttgaaagttggttccataataaaga 444 Query: 1657 agatgtagaag 1667 ||||||||||| Sbjct: 443 agatgtagaag 433 Score = 157 bits (79), Expect = 2e-34 Identities = 97/103 (94%) Strand = Plus / Minus Query: 1788 ttggaggaaggattgatggctccggatctcggtaggcaattatgttcaactcgagattta 1847 ||||||||||||||||||||||| |||||| |||||| ||||||||| |||| ||||||| Sbjct: 312 ttggaggaaggattgatggctccagatctctgtaggcgattatgttcgactcaagattta 253 Query: 1848 gttgttgagattgttagtctgggagggtcagaaccagattttg 1890 |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 252 gttgttgagattcttagtctgggagggtcagaaccagattttg 210
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 216 bits (109), Expect = 2e-52 Identities = 253/301 (84%) Strand = Plus / Plus Query: 1281 cagcagttgattacatggtctgtctcctgtcagacatttttatacccacatatgatggcc 1340 ||||||| ||||| ||||||||||||||||| || || || || ||||| || ||||| | Sbjct: 13542663 cagcagtagattatatggtctgtctcctgtcggatatcttcatgcccacgtacgatggtc 13542722 Query: 1341 cgagcaacttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaa 1400 | |||||||| ||||||||||||||||| || ||||| || ||||| |||| || |||| Sbjct: 13542723 caagcaactttgcaaacaacctcatgggccaccgcctctactatggcttccagacaacaa 13542782 Query: 1401 tcacgccaaacaggaaggcccttgctccgatattcatggacatggaggaagggcatgcgt 1460 | || ||||||||||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct: 13542783 ttacaccaaacaggaaggcccttgctccaatattcatggacagggaggaaggccatgtaa 13542842 Query: 1461 ctggatatgaggagaggatcaggctggtcatgttcaacacccattttggagccccccaca 1520 | || | |||||| | |||||| || ||||||||||| || ||||| | || |||| Sbjct: 13542843 ccggttttgaggatcgagtcaggcaagtaatgttcaacacacactttggcggtccacaca 13542902 Query: 1521 agcgcatccatccagagtctttctacacaaactcatggccagagtgcttctgccagatga 1580 ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 13542903 agcgcattcatccagagtctttctatacaaactcatggcctgagtgcttctgccatatga 13542962 Query: 1581 a 1581 | Sbjct: 13542963 a 13542963 Score = 192 bits (97), Expect = 3e-45 Identities = 184/213 (86%) Strand = Plus / Plus Query: 748 gaagtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatga 807 ||||||||| || |||||||||||||| || |||||||| || |||||||| |||||||| Sbjct: 13541173 gaagtatggggctatatatttaactcctttctcacaccgcttagcagaagatattgatga 13541232 Query: 808 tccagagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaa 867 ||||||||| || || ||||||||| | |||||||| ||||| |||| ||||||||| | Sbjct: 13541233 tccagagctccagaggttgagatgccgagtgaattaccacgcactacgatttaagccaca 13541292 Query: 868 tatcatgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtc 927 ||||||||||| |||| ||| |||||||| ||||| || || |||||||| |||||||| Sbjct: 13541293 tatcatgaaaattagcaatgagatagtgaacaagctacggtctgaaggccacttcatgtc 13541352 Query: 928 aattcatcttcggtttgagctggatatgcttgc 960 |||||||||||| |||||| |||| |||||||| Sbjct: 13541353 aattcatcttcgatttgagatggacatgcttgc 13541385 Score = 87.7 bits (44), Expect = 1e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||||||| ||||||||| |||||| | ||||||||| ||||||||||||| Sbjct: 13539799 aggatgttgatgtgaataagttgtggacgactgctggttcaaatggttggagagcatctt 13539858 Query: 372 ctgcaccacgcacctattggcctc 395 |||||||||| | |||||||||| Sbjct: 13539859 ctgcaccacggtcatattggcctc 13539882 Score = 85.7 bits (43), Expect = 6e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 ||||||||||||||||||||||| || || |||||||||||| |||| || |||||| | Sbjct: 13540178 atatgtaatgctgttgttgcagctcgtataatgaatgctacattagttctaccagagctt 13540237 Query: 533 gatacaaattcattctggc 551 ||||||||||| ||||||| Sbjct: 13540238 gatacaaattctttctggc 13540256 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 1026 aaaattttgcaaataagacccttgtttacaggaaaagaaggctcattggaaagtgccctt 1085 ||||||||||||| || | ||||||||||| | | ||||| |||| || |||||||| | Sbjct: 13541887 aaaattttgcaaagaaaatccttgtttacaaggatagaagaatcatagggaagtgcccct 13541946 Query: 1086 taactccagaagaggtg 1102 | ||||||||||||||| Sbjct: 13541947 tgactccagaagaggtg 13541963 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 419 aatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgc 471 ||||| ||||||||||| |||||||||||||| ||| |||||| ||||||| Sbjct: 13539996 aatggatacttgcgtgttcggtgcaatggcggattgaatcaacaaagaagtgc 13540048
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 216 bits (109), Expect = 2e-52 Identities = 253/301 (84%) Strand = Plus / Minus Query: 1281 cagcagttgattacatggtctgtctcctgtcagacatttttatacccacatatgatggcc 1340 ||||||| ||||| ||||||||||||||||| || || || || ||||| || ||||| | Sbjct: 42576 cagcagtagattatatggtctgtctcctgtcggatatcttcatgcccacgtacgatggtc 42517 Query: 1341 cgagcaacttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaa 1400 | |||||||| ||||||||||||||||| || ||||| || ||||| |||| || |||| Sbjct: 42516 caagcaactttgcaaacaacctcatgggccaccgcctctactatggcttccagacaacaa 42457 Query: 1401 tcacgccaaacaggaaggcccttgctccgatattcatggacatggaggaagggcatgcgt 1460 | || ||||||||||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct: 42456 ttacaccaaacaggaaggcccttgctccaatattcatggacagggaggaaggccatgtaa 42397 Query: 1461 ctggatatgaggagaggatcaggctggtcatgttcaacacccattttggagccccccaca 1520 | || | |||||| | |||||| || ||||||||||| || ||||| | || |||| Sbjct: 42396 ccggttttgaggatcgagtcaggcaagtaatgttcaacacacactttggcggtccacaca 42337 Query: 1521 agcgcatccatccagagtctttctacacaaactcatggccagagtgcttctgccagatga 1580 ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 42336 agcgcattcatccagagtctttctatacaaactcatggcctgagtgcttctgccatatga 42277 Query: 1581 a 1581 | Sbjct: 42276 a 42276 Score = 192 bits (97), Expect = 3e-45 Identities = 184/213 (86%) Strand = Plus / Minus Query: 748 gaagtatggtgcgatatatttaactccattttcacaccgtttggcagaagaaattgatga 807 ||||||||| || |||||||||||||| || |||||||| || |||||||| |||||||| Sbjct: 44066 gaagtatggggctatatatttaactcctttctcacaccgcttagcagaagatattgatga 44007 Query: 808 tccagagcttcaaagattgagatgcagggtgaattatcacgctctacagtttaagccaaa 867 ||||||||| || || ||||||||| | |||||||| ||||| |||| ||||||||| | Sbjct: 44006 tccagagctccagaggttgagatgccgagtgaattaccacgcactacgatttaagccaca 43947 Query: 868 tatcatgaaaacaagcagtgatatagtgaataagctccgttcagaaggccatttcatgtc 927 ||||||||||| |||| ||| |||||||| ||||| || || |||||||| |||||||| Sbjct: 43946 tatcatgaaaattagcaatgagatagtgaacaagctacggtctgaaggccacttcatgtc 43887 Query: 928 aattcatcttcggtttgagctggatatgcttgc 960 |||||||||||| |||||| |||| |||||||| Sbjct: 43886 aattcatcttcgatttgagatggacatgcttgc 43854 Score = 87.7 bits (44), Expect = 1e-13 Identities = 74/84 (88%) Strand = Plus / Minus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| ||| ||||||| ||||||||| |||||| | ||||||||| ||||||||||||| Sbjct: 45440 aggatgttgatgtgaataagttgtggacgactgctggttcaaatggttggagagcatctt 45381 Query: 372 ctgcaccacgcacctattggcctc 395 |||||||||| | |||||||||| Sbjct: 45380 ctgcaccacggtcatattggcctc 45357 Score = 85.7 bits (43), Expect = 6e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 ||||||||||||||||||||||| || || |||||||||||| |||| || |||||| | Sbjct: 45061 atatgtaatgctgttgttgcagctcgtataatgaatgctacattagttctaccagagctt 45002 Query: 533 gatacaaattcattctggc 551 ||||||||||| ||||||| Sbjct: 45001 gatacaaattctttctggc 44983 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Minus Query: 1026 aaaattttgcaaataagacccttgtttacaggaaaagaaggctcattggaaagtgccctt 1085 ||||||||||||| || | ||||||||||| | | ||||| |||| || |||||||| | Sbjct: 43352 aaaattttgcaaagaaaatccttgtttacaaggatagaagaatcatagggaagtgcccct 43293 Query: 1086 taactccagaagaggtg 1102 | ||||||||||||||| Sbjct: 43292 tgactccagaagaggtg 43276 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Minus Query: 419 aatgggtacttgcgtgtccggtgcaatggcggcttgtcccaacaacgaagtgc 471 ||||| ||||||||||| |||||||||||||| ||| |||||| ||||||| Sbjct: 45243 aatggatacttgcgtgttcggtgcaatggcggattgaatcaacaaagaagtgc 45191
>gb|AY107954.1| Zea mays PCO069262 mRNA sequence Length = 724 Score = 141 bits (71), Expect = 1e-29 Identities = 125/143 (87%) Strand = Plus / Plus Query: 312 aggattttgttgtgaatgagttgtggaggactgcagattcaaatggctggagagcatctt 371 ||||| |||||| |||||||||||||| || | | || ||||||| ||||||||||||| Sbjct: 411 aggatgttgttgcaaatgagttgtggagaaccgtaaatgcaaatggttggagagcatctt 470 Query: 372 ctgcaccacgcacctattggcctcccccaccaactgaatctgagagcaatgggtacttgc 431 ||||||||| || ||||||||||| | |||| |||||||||||||||||||||||||| Sbjct: 471 ctgcaccacacatctattggcctcacataccagctgaatctgagagcaatgggtacttgt 530 Query: 432 gtgtccggtgcaatggcggcttg 454 ||||||||||||| || |||||| Sbjct: 531 gtgtccggtgcaacggtggcttg 553 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 225 tgtgggtcgccgtagcggcgctggtcacgggcaccatctggctctggtcctcctcctc 282 |||||||| | ||| |||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 310 tgtgggtcactgtaacggcactggtcacaggcaccatctgcctctgttcgtcctcctc 367
>ref|NM_100369.3| Arabidopsis thaliana unknown protein (AT1G04910) mRNA, complete cds Length = 1886 Score = 109 bits (55), Expect = 4e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct: 1242 gattacatggtttgtcttctctccgacatttttatgccaacatatgatggaccgagcaat 1301 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatca 1403 ||||| ||||| ||| | ||||||||||| || ||||||||||| |||||||||| Sbjct: 1302 ttcgccaacaatctcttaggtcatcgcctttactatggtttccgtaccacaatca 1356 Score = 71.9 bits (36), Expect = 9e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 461 caacgaagtgcaatatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtg 520 ||||| ||||| ||||||||||| || |||| || || ||||||||||||||||| ||| Sbjct: 411 caacgtagtgcgatatgtaatgcagtacttgctgcgcggatcatgaatgctacacttgtg 470 Query: 521 ctgccagagttagatacaaattcattctggcatgacgagagtggtttt 568 |||| || |||||| |||| || || |||||||| || ||||||||| Sbjct: 471 ttgcccgaattagatgcaaactcgttttggcatgatgacagtggtttt 518
>gb|BT008880.1| Arabidopsis thaliana At1g04910 mRNA, complete cds Length = 1560 Score = 109 bits (55), Expect = 4e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct: 1138 gattacatggtttgtcttctctccgacatttttatgccaacatatgatggaccgagcaat 1197 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatca 1403 ||||| ||||| ||| | ||||||||||| || ||||||||||| |||||||||| Sbjct: 1198 ttcgccaacaatctcttaggtcatcgcctttactatggtttccgtaccacaatca 1252 Score = 71.9 bits (36), Expect = 9e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 461 caacgaagtgcaatatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtg 520 ||||| ||||| ||||||||||| || |||| || || ||||||||||||||||| ||| Sbjct: 307 caacgtagtgcgatatgtaatgcagtacttgctgcgcggatcatgaatgctacacttgtg 366 Query: 521 ctgccagagttagatacaaattcattctggcatgacgagagtggtttt 568 |||| || |||||| |||| || || |||||||| || ||||||||| Sbjct: 367 ttgcccgaattagatgcaaactcgttttggcatgatgacagtggtttt 414
>gb|AY062762.1| Arabidopsis thaliana Similar to auxin-independent growth promoter (axi 1) (F13M7.10) mRNA, complete cds Length = 1873 Score = 109 bits (55), Expect = 4e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct: 1242 gattacatggtttgtcttctctccgacatttttatgccaacatatgatggaccgagcaat 1301 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatca 1403 ||||| ||||| ||| | ||||||||||| || ||||||||||| |||||||||| Sbjct: 1302 ttcgccaacaatctcttaggtcatcgcctttactatggtttccgtaccacaatca 1356 Score = 71.9 bits (36), Expect = 9e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 461 caacgaagtgcaatatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtg 520 ||||| ||||| ||||||||||| || |||| || || ||||||||||||||||| ||| Sbjct: 411 caacgtagtgcgatatgtaatgcagtacttgctgcgcggatcatgaatgctacacttgtg 470 Query: 521 ctgccagagttagatacaaattcattctggcatgacgagagtggtttt 568 |||| || |||||| |||| || || |||||||| || ||||||||| Sbjct: 471 ttgcccgaattagatgcaaactcgttttggcatgatgacagtggtttt 518
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence Length = 89713 Score = 109 bits (55), Expect = 4e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct: 34072 gattacatggtttgtcttctctccgacatttttatgccaacatatgatggaccgagcaat 34131 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatca 1403 ||||| ||||| ||| | ||||||||||| || ||||||||||| |||||||||| Sbjct: 34132 ttcgccaacaatctcttaggtcatcgcctttactatggtttccgtaccacaatca 34186 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 473 atatgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagtta 532 ||||||||||| || |||| || || ||||||||||||||||| ||| |||| || ||| Sbjct: 32514 atatgtaatgcagtacttgctgcgcggatcatgaatgctacacttgtgttgcccgaatta 32573 Query: 533 gatacaaattcattctggcatga 555 ||| |||| || || |||||||| Sbjct: 32574 gatgcaaactcgttttggcatga 32596
>ref|NM_100368.2| Arabidopsis thaliana unknown protein (AT1G04900) mRNA, complete cds Length = 2360 Score = 105 bits (53), Expect = 6e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 1291 ttacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaactt 1350 ||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||| || Sbjct: 2360 ttacatggtttgtcttctctccgacatttttatgccaacatatgatggaccgagcaattt 2301 Query: 1351 cgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatca 1403 ||| ||||| ||| | ||||||||||| || ||||||||||| |||||||||| Sbjct: 2300 cgccaacaatctcttaggtcatcgcctttactatggtttccgtaccacaatca 2248
>gb|BT013646.1| Lycopersicon esculentum clone 132452R, mRNA sequence Length = 1980 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 457 ccaacaacgaagtgcaatatgtaatgctgttgttgcagcacgaatcatgaatgctacact 516 ||||||||| |||||||| |||||||| ||| |||| |||||||| |||||||||||||| Sbjct: 419 ccaacaacgtagtgcaatctgtaatgcagttcttgctgcacgaattatgaatgctacact 478 Query: 517 agtgctgccagagttagatacaaattcattctggca 552 ||| | || ||||| ||| ||||||| |||||||| Sbjct: 479 ggtgttacctgagttggatgcaaattccttctggca 514 Score = 67.9 bits (34), Expect = 1e-07 Identities = 88/106 (83%) Strand = Plus / Plus Query: 1086 taactccagaagaggtgggtcttatcatacgtgctatgggatttgataacacaacacgga 1145 ||||||||||||||||||||||||| |||| || ||||| ||||| ||| | || ||| Sbjct: 1048 taactccagaagaggtgggtcttattttacgcgcaatgggttttgacaactctactagga 1107 Query: 1146 tttaccttgcttctggcaagctctttggtggggaacgcttcatgaa 1191 | ||||||||| | || ||||||||||||| || || |||||||| Sbjct: 1108 tataccttgctgcaggtgagctctttggtggtgagcgattcatgaa 1153 Score = 52.0 bits (26), Expect = 0.008 Identities = 92/114 (80%) Strand = Plus / Plus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||| ||||| ||||| || || || ||||| || || ||||||||||| || ||||| Sbjct: 1254 gattatatggtttgtcttctctctgatattttcatgccaacatatgatggaccaagcaat 1313 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatc 1402 ||||| ||||| ||| | |||||||| |||| |||||||| || || |||||| Sbjct: 1314 ttcgcgaacaatctccttggtcatcggttatactatggttttcgcacgacaatc 1367
>gb|AC148527.20| Medicago truncatula clone mth2-49g13, complete sequence Length = 107439 Score = 77.8 bits (39), Expect = 1e-10 Identities = 96/115 (83%) Strand = Plus / Minus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 |||||||||||||| || || || |||||||| || || || ||||| || || |||||| Sbjct: 47618 gattacatggtctgccttctttctgacattttcatgccaacctatgacgggccaagcaac 47559 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaaccacaatca 1403 || ||||||||||| | ||||||||||| ||||||||||| || || ||||||| Sbjct: 47558 tttgcaaacaaccttcttggtcatcgcctttattatggttttcggactacaatca 47504 Score = 67.9 bits (34), Expect = 1e-07 Identities = 67/78 (85%) Strand = Plus / Minus Query: 478 taatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttagatac 537 |||||||||| |||| || || || ||||||||||||||||||||||| || || ||| | Sbjct: 52002 taatgctgttcttgctgcgcggattatgaatgctacactagtgctgcctgaattggatgc 51943 Query: 538 aaattcattctggcatga 555 ||| || ||||||||||| Sbjct: 51942 aaactccttctggcatga 51925 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 1335 atggcccgagcaacttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaa 1394 ||||||| |||||||| |||||||||||| | ||||||||||| |||||||| || || | Sbjct: 30259 atggcccaagcaactttgcaaacaacctccttggtcatcgcctttattatggctttcgga 30200 Query: 1395 ccacaatca 1403 | ||||||| Sbjct: 30199 ctacaatca 30191 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 482 gctgttgttgcagcacgaatcatgaatgctacactagtgctgcc 525 |||||| |||| || || |||||||||||||||||||||||||| Sbjct: 34066 gctgttcttgctgcgcggatcatgaatgctacactagtgctgcc 34023 Score = 48.1 bits (24), Expect = 0.12 Identities = 33/36 (91%) Strand = Plus / Minus Query: 920 ttcatgtcaattcatcttcggtttgagctggatatg 955 |||||||| || ||||||||||||||| |||||||| Sbjct: 49574 ttcatgtcgatacatcttcggtttgagatggatatg 49539 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 934 tcttcggtttgagctggatatg 955 |||||||||||||||||||||| Sbjct: 31566 tcttcggtttgagctggatatg 31545
>gb|AC183427.2| Populus trichocarpa clone Pop1-48H6, complete sequence Length = 82149 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 476 tgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttagat 535 |||||||||||| |||| ||| |||||||||| |||||||| || |||| ||||| ||| Sbjct: 11915 tgtaatgctgttcttgctgcaagaatcatgaacgctacacttgttttgcctgagttggat 11856 Query: 536 acaaattcattctggcatga 555 |||| || ||||||||||| Sbjct: 11855 gcaaactccttctggcatga 11836 Score = 54.0 bits (27), Expect = 0.002 Identities = 87/107 (81%) Strand = Plus / Minus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||||||||| ||||| || | ||||| ||||| || || |||||||| || |||||| Sbjct: 9610 gattacatggtttgtcttcttgctgacatatttatgccaacttatgatggaccaagcaac 9551 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaac 1395 || || ||||| ||| ||||||| || || |||||||| || ||||| Sbjct: 9550 tttgccaacaatctcctgggtcaccgtctgtattatggctttcgaac 9504 Score = 42.1 bits (21), Expect = 7.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 772 tccattttcacaccgtttggcagaagaaattga 804 |||||||||||| ||||| || ||||||||||| Sbjct: 11025 tccattttcacatcgtttagctgaagaaattga 10993
>gb|AC184060.2| Populus trichocarpa clone Pop1-106E15, complete sequence Length = 86314 Score = 61.9 bits (31), Expect = 8e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 1289 gattacatggtctgtctcctgtcagacatttttatacccacatatgatggcccgagcaac 1348 ||||||||||| ||||| || | ||||| ||||| || || |||||||| || |||||| Sbjct: 68718 gattacatggtttgtcttcttgctgacatatttatgccaacttatgatgggccaagcaac 68777 Query: 1349 ttcgcaaacaacctcatgggtcatcgcctatattatggtttccgaac 1395 || || ||||| ||| ||||||| ||||| |||||||| || ||||| Sbjct: 68778 tttgccaacaatctcttgggtcaccgcctgtattatggctttcgaac 68824 Score = 56.0 bits (28), Expect = 5e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 476 tgtaatgctgttgttgcagcacgaatcatgaatgctacactagtgctgccagagttagat 535 |||||||||||| |||| ||| |||||||||| |||||||| || |||| ||||| ||| Sbjct: 66355 tgtaatgctgttcttgctgcaagaatcatgaacgctacacttgttttgcctgagttggat 66414 Query: 536 acaaattcattctggcatga 555 | || || ||||||||||| Sbjct: 66415 gcgaactccttctggcatga 66434 Score = 50.1 bits (25), Expect = 0.032 Identities = 34/37 (91%) Strand = Plus / Plus Query: 768 taactccattttcacaccgtttggcagaagaaattga 804 |||||||||||||||| ||||| || ||||||||||| Sbjct: 67310 taactccattttcacatcgtttagctgaagaaattga 67346
>gb|AC145884.3| Pan troglodytes BAC clone RP43-40D9 from chromosome y, complete sequence Length = 95740 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1644 tccagaataaagaagatgtagaagcagaag 1673 |||||||||||||||| ||||||| ||||| Sbjct: 91497 tccagaataaagaagaagtagaagaagaag 91468
>gb|AC103798.2| Homo sapiens chromosome 11, clone RP11-159D8, complete sequence Length = 163680 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1776 gtatgacaatttttggaggaag 1797 |||||||||||||||||||||| Sbjct: 146243 gtatgacaatttttggaggaag 146264
>gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 11, complete sequence Length = 177314 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1776 gtatgacaatttttggaggaag 1797 |||||||||||||||||||||| Sbjct: 145767 gtatgacaatttttggaggaag 145746
>gb|AC110817.6| Mus musculus BAC clone RP23-155B20 from 13, complete sequence Length = 200362 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 ggtccaggattttgttgtgaat 328 |||||||||||||||||||||| Sbjct: 93111 ggtccaggattttgttgtgaat 93090
>emb|CT573420.5| M.truncatula DNA sequence from clone MTH2-17L3 on chromosome 3, complete sequence Length = 126234 Score = 42.1 bits (21), Expect = 7.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 824 ttgagatgcagggtgaattatcacgctct 852 |||||||| ||||| |||||||||||||| Sbjct: 46481 ttgagatgtagggtcaattatcacgctct 46509
>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence Length = 203772 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1578 tgaatgctaggaatcaagctg 1598 ||||||||||||||||||||| Sbjct: 201702 tgaatgctaggaatcaagctg 201682
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 800 attgatgatccagagcttcaa 820 ||||||||||||||||||||| Sbjct: 950749 attgatgatccagagcttcaa 950769
>gb|AC133090.4| Mus musculus BAC clone RP24-194H23 from chromosome 15, complete sequence Length = 148555 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1237 tgggagtggaaagctggaaga 1257 ||||||||||||||||||||| Sbjct: 116893 tgggagtggaaagctggaaga 116873
>gb|AC153008.4| Mus musculus BAC clone RP23-457I7 from chromosome 15, complete sequence Length = 171878 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1237 tgggagtggaaagctggaaga 1257 ||||||||||||||||||||| Sbjct: 156088 tgggagtggaaagctggaaga 156108
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gccggcaccgcgcaccggcgc 221 ||||||||||||||||||||| Sbjct: 11826648 gccggcaccgcgcaccggcgc 11826628
>emb|AL390965.15| Human DNA sequence from clone RP11-640E11 on chromosome 13 Contains a solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 (SLC25A5) pseudogene, complete sequence Length = 92179 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 gaatcatgaatgctacactag 518 ||||||||||||||||||||| Sbjct: 61257 gaatcatgaatgctacactag 61277
>emb|AL049738.4|HSJ944N18 Human DNA sequence from clone RP5-944N18 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 122383 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 787 tttggcagaagaaattgatga 807 ||||||||||||||||||||| Sbjct: 64068 tttggcagaagaaattgatga 64048
>gb|AE009540.1| Brucella melitensis 16M chromosome I, section 97 of 195 of the complete sequence Length = 10277 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 800 attgatgatccagagcttcaa 820 ||||||||||||||||||||| Sbjct: 2720 attgatgatccagagcttcaa 2700
>gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, complete sequence Length = 211732 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 catctggctctggtcctcctc 279 ||||||||||||||||||||| Sbjct: 16047 catctggctctggtcctcctc 16067
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 gccggcaccgcgcaccggcgc 221 ||||||||||||||||||||| Sbjct: 80768 gccggcaccgcgcaccggcgc 80788
>emb|AJ586718.1| Bluetongue virus 15 vp5 gene for outer capsid protein VP5, genomic RNA, isolate ZIM2003/09 Length = 1639 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 catctggctctggtcctcctcctcc 283 ||||||| ||||||||||||||||| Sbjct: 477 catctggatctggtcctcctcctcc 453
>emb|AJ586717.1| Bluetongue virus 15 vp5 gene for outer capsid protein VP5, genomic RNA, isolate ZIM2003/08 Length = 1639 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 catctggctctggtcctcctcctcc 283 ||||||| ||||||||||||||||| Sbjct: 477 catctggatctggtcctcctcctcc 453
>emb|AJ586716.1| Bluetongue virus 15 vp5 gene for outer capsid protein VP5, genomic RNA, isolate RSArrrr/15 Length = 1639 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 catctggctctggtcctcctcctcc 283 ||||||| ||||||||||||||||| Sbjct: 477 catctggatctggtcctcctcctcc 453
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 800 attgatgatccagagcttcaa 820 ||||||||||||||||||||| Sbjct: 969750 attgatgatccagagcttcaa 969770
>gb|AC157803.6| Mus musculus chromosome 1, clone RP24-302H15, complete sequence Length = 136168 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 tcctcctcctccgttgtcctc 292 ||||||||||||||||||||| Sbjct: 126045 tcctcctcctccgttgtcctc 126025
>gb|AC102401.11| Mus musculus chromosome 1, clone RP24-257D18, complete sequence Length = 166242 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 tcctcctcctccgttgtcctc 292 ||||||||||||||||||||| Sbjct: 50129 tcctcctcctccgttgtcctc 50149
>gb|AC157520.2| Mus musculus BAC clone RP23-229N21 from 6, complete sequence Length = 196037 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1790 ggaggaaggattgatggctcc 1810 ||||||||||||||||||||| Sbjct: 133368 ggaggaaggattgatggctcc 133388
>gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome 15, complete sequence Length = 148029 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1578 tgaatgctaggaatcaagctg 1598 ||||||||||||||||||||| Sbjct: 112441 tgaatgctaggaatcaagctg 112421
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 800 attgatgatccagagcttcaa 820 ||||||||||||||||||||| Sbjct: 966870 attgatgatccagagcttcaa 966890
>dbj|AB024733.1| Symplocarpus foetidus mRNA for SfUCPa, complete cds Length = 1525 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 593 ttcatcaagacattgaaatatgatg 617 |||||||||||||||||| |||||| Sbjct: 1045 ttcatcaagacattgaaaaatgatg 1069
>dbj|AP000945.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-870F11, complete sequences Length = 216975 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1722 tgagtcagctaaggttttgat 1742 ||||||||||||||||||||| Sbjct: 22861 tgagtcagctaaggttttgat 22841 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 361,366,790 Number of extensions: 19209894 Number of successful extensions: 93783 Number of sequences better than 10.0: 54 Number of HSP's gapped: 93758 Number of HSP's successfully gapped: 154 Length of query: 2011 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1988 Effective length of database: 18,503,978,556 Effective search space: 36785909369328 Effective search space used: 36785909369328 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
