ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf18j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120541:Os02g0236100 27 3.3

>AK120541:Os02g0236100 |
          Length = 620
 Score = 26.9 bits (58), Expect = 3.3
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 168 IYVIYFLKYSYWRIKLSWSQQNVQITL*RL*FF 70
           ++VI +LKY  WR+  + + Q+++I L  L  F
Sbjct: 254 LFVICWLKYCRWRLPFASADQDLEIELGHLKHF 286


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 4,761,759
Number of extensions: 91113
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 117
Number of HSP's successfully gapped: 1
Length of query: 67
Length of database: 15,399,855
Length adjustment: 39
Effective length of query: 28
Effective length of database: 13,838,256
Effective search space: 387471168
Effective search space used: 387471168
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top