ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf18j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os06g30320:12006.t02736:unspliced-genomic nucleolar comp... 32 0.49
2LOC_Os11g46240:12011.t04148:unspliced-genomic ATP binding pr... 32 0.67
3LOC_Os02g04080:12002.t00307:unspliced-genomic TTN7, putative 32 0.67
4LOC_Os06g11640:12006.t01041:unspliced-genomic serine/threoni... 27 1.3
5LOC_Os05g27450:12005.t02396:unspliced-genomic transposon pro... 29 1.4
6LOC_Os08g41270:12008.t03856:unspliced-genomic inositol 1,4,5... 30 2.4
7LOC_Os10g30990:12010.t02429:unspliced-genomic retrotransposo... 29 4.5
8LOC_Os09g18159:12009.t01599:unspliced-genomic light repressi... 29 4.5
9LOC_Os03g46220:12003.t03990:unspliced-genomic retrotransposo... 29 4.5
10LOC_Os12g04270:12012.t00316:unspliced-genomic expressed protein 29 6.2
11LOC_Os11g04500:12011.t00343:unspliced-genomic expressed protein 29 6.2
12LOC_Os10g03990:12010.t00288:unspliced-genomic receptor-like ... 29 6.2
13LOC_Os06g19090:12006.t01732:unspliced-genomic hypothetical p... 29 6.2
14LOC_Os01g47410:12001.t04189:unspliced-genomic aspartic prote... 29 6.2
15LOC_Os11g11070:12011.t00995:unspliced-genomic mRNA capping e... 29 6.5
16LOC_Os03g15020:12003.t01288:unspliced-genomic beta-galactosi... 29 6.5
17LOC_Os02g29850:12002.t02678:unspliced-genomic retrotransposo... 29 6.5
18LOC_Os02g36720:12002.t03309:unspliced-genomic hypothetical p... 23 6.5
19LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putati... 25 6.6
20LOC_Os04g47400:12004.t04266:unspliced-genomic pollen-specifi... 24 7.6
21LOC_Os11g22130:12011.t01883:unspliced-genomic retrotransposo... 28 8.5
22LOC_Os08g33488:12008.t03089:unspliced-genomic MADS-box trans... 28 8.5
23LOC_Os05g09000:12005.t00777:unspliced-genomic expressed protein 28 8.5
24LOC_Os11g26970:12011.t02312:unspliced-genomic hypothetical p... 28 8.9
25LOC_Os09g19820:12009.t01716:unspliced-genomic aminopeptidase... 28 8.9
26LOC_Os07g07160:12007.t00594:unspliced-genomic hypothetical p... 28 8.9
27LOC_Os02g57870:12002.t05358:unspliced-genomic expressed protein 28 8.9
28LOC_Os10g34400:12010.t02738:unspliced-genomic expressed protein 26 9.6

>LOC_Os06g30320:12006.t02736:unspliced-genomic nucleolar complex-associated protein, expressed|
          Length = 6822
 Score = 32.2 bits (64), Expect = 0.49
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3 / -2

                                          
Query: 112  STKCSNYFIKTIIFC*YETL*IIFPPICTS 23
            S KC     KT IFC*+     IFPP C S
Sbjct: 6818 SNKCVL*HSKTWIFC*WTVKPTIFPPFCAS 6729



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>LOC_Os11g46240:12011.t04148:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 6759

 Score = 31.8 bits (63), Expect = 0.67
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = -2 / +2

                                                 
Query: 122  YPGVNKMFKLLYKDYNFLLI*NLMNHISSNMYVSQSG 12
            Y  V+ + ++L+++ ++LLI N ++HI S +++   G
Sbjct: 1154 YHSVSSVARVLFQNNSYLLIINFLDHIISQIFLELEG 1264



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>LOC_Os02g04080:12002.t00307:unspliced-genomic TTN7, putative|
          Length = 6148

 Score = 31.8 bits (63), Expect = 0.67
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3 / +1

                                        
Query: 196  FFFRLSICTNICHIFS*IFILENKVILE 113
            F F +   TN+C ++ *IF+L   ++LE
Sbjct: 3037 FLFLIDNLTNVCFVYC*IFLLLGMIVLE 3120



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>LOC_Os06g11640:12006.t01041:unspliced-genomic serine/threonine-protein phosphatase 2A activator 2, putative,|
            expressed
          Length = 4745

 Score = 26.7 bits (52), Expect(2) = 1.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1 / +3

                               
Query: 201  FFFFLDYQFAQIYVIYFLK 145
            FFF L Y+F  ++ ++F K
Sbjct: 3165 FFFILQYEFNIVFYVHFTK 3221



 Score = 23.1 bits (44), Expect(2) = 1.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3 / +1

                                      
Query: 136  LENKVILESTKCSNYFIKTIIFC*YE 59
            +ENK++  +T CSN  +   + C Y+
Sbjct: 3541 IENKLLGLATCCSN*KLNFCVLCHYK 3618



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>LOC_Os05g27450:12005.t02396:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 7138

 Score = 28.6 bits (56), Expect(2) = 1.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3 / -3

                                  
Query: 199  FFFFRLSICTNICHIFS*IFIL 134
            FFF RL +  NICH+   IF L
Sbjct: 6677 FFFVRLCLR*NICHVRQKIFCL 6612



 Score = 21.7 bits (41), Expect(2) = 1.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3 / -3

                                   
Query: 142  FILENKVILESTKCSNYFIKTII 74
            +I  NK+ L   KC +  I+T +
Sbjct: 4979 YIYMNKIYLHYRKCVHMHIETYV 4911



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>LOC_Os08g41270:12008.t03856:unspliced-genomic inositol 1,4,5-trisphosphate 5-phosphatase, putative, expressed|
          Length = 7376

 Score = 29.9 bits (59), Expect = 2.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2 / +3

                                                 
Query: 116  GVNKMFKLLYKDYNFLLI*NLMNHISSNMYVSQSGVT 6
            G +K   L   D+N  LI NLM + SS  Y +  GVT
Sbjct: 5199 GESKTHMLFCLDHNHSLIHNLMFYCSSGRYEACMGVT 5309



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>LOC_Os10g30990:12010.t02429:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2971

 Score = 29.0 bits (57), Expect = 4.5
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3 / -1

                                                
Query: 142 FILENKVILESTKCSNYFIKTIIFC*YETL*IIFPPI 32
           F+L+NK     T CS+   KT+ +   +++*II P I
Sbjct: 874 FLLKNKPFFGPTYCSHGNRKTVTYLLLQSI*IIRPSI 764



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>LOC_Os09g18159:12009.t01599:unspliced-genomic light repressible receptor protein kinase, putative, expressed|
          Length = 20467

 Score = 29.0 bits (57), Expect = 4.5
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3 / -1

                                                 
Query: 193   FFRLSICTNICHIFS*IFILENKVILESTKCSNYFI 86
             + RLS+  +I H   *IF  EN++IL   K ++ +I
Sbjct: 17503 WMRLSLHAHIWHSKY*IFFTENRLILSMVKHNSNYI 17396



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>LOC_Os03g46220:12003.t03990:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5778

 Score = 29.0 bits (57), Expect = 4.5
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3 / -3

                        
Query: 40   PPICTSPSRASP 5
            PP CTSP+RASP
Sbjct: 1963 PPPCTSPTRASP 1928



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>LOC_Os12g04270:12012.t00316:unspliced-genomic expressed protein|
          Length = 3493

 Score = 28.6 bits (56), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3 / +3

                           
Query: 199  FFFFRLSICTNICHI 155
            F FF L+ C NICH+
Sbjct: 3039 FIFFGLTPCANICHL 3083



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>LOC_Os11g04500:12011.t00343:unspliced-genomic expressed protein|
          Length = 3506

 Score = 28.6 bits (56), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3 / +3

                           
Query: 199  FFFFRLSICTNICHI 155
            F FF L+ C NICH+
Sbjct: 3039 FIFFGLTPCANICHL 3083



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>LOC_Os10g03990:12010.t00288:unspliced-genomic receptor-like kinase, putative|
          Length = 2393

 Score = 28.6 bits (56), Expect = 6.2
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -2 / +3

                                                           
Query: 188  *IINLHKYMSYIFLNIHIGE*SYPGVNKMFKLLYKDYNFLLI*NLMN 48
            *+ N+H  M YI++ I+I    Y   N +   +Y    F++I ++ N
Sbjct: 1731 *LTNIHTRMLYIYIYIYIYLYIYIWYNLLNSFIYMYIRFIIIKDIAN 1871



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>LOC_Os06g19090:12006.t01732:unspliced-genomic hypothetical protein|
          Length = 3301

 Score = 28.6 bits (56), Expect = 6.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2 / -1

                                
Query: 113  LQDNFILQYEYLRKYMTYIC 172
            LQ + I   +YLR  MTYIC
Sbjct: 3076 LQSSLINYLQYLRSMMTYIC 3017



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>LOC_Os01g47410:12001.t04189:unspliced-genomic aspartic proteinase oryzasin-1 precursor, putative, expressed|
          Length = 6496

 Score = 28.6 bits (56), Expect = 6.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2 / +1

                              
Query: 200  FFFF*IINLHKYMSYIFL 147
            FF+F I +LH  +SYIFL
Sbjct: 5197 FFYFRIYSLHPKVSYIFL 5250



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>LOC_Os11g11070:12011.t00995:unspliced-genomic mRNA capping enzyme, putative, expressed|
          Length = 12776

 Score = 28.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1 / +1

                           
Query: 159  IYFLKYSYWRIKLSW 115
            I +LK  YW IKLSW
Sbjct: 9868 IVYLKARYWDIKLSW 9912



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>LOC_Os03g15020:12003.t01288:unspliced-genomic beta-galactosidase precursor, putative, expressed|
          Length = 6223

 Score = 28.6 bits (56), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1 / -2

                                 
Query: 174  AQIYVIYFLKYSYWRIKLSWS 112
            AQ+  I   K+SYW ++++WS
Sbjct: 5058 AQLNDIITKKFSYWNMRINWS 4996



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>LOC_Os02g29850:12002.t02678:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 4158

 Score = 28.6 bits (56), Expect = 6.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1 / -1

                                      
Query: 201  FFFFLDYQFAQIYVIYFLKYSYWRIK 124
            FFF L +  A +Y+ +F    +WR K
Sbjct: 3798 FFFLLLHSHASLYLCFFSLKEFWRKK 3721



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>LOC_Os02g36720:12002.t03309:unspliced-genomic hypothetical protein|
          Length = 1166

 Score = 22.6 bits (43), Expect(2) = 6.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3 / -3

                                     
Query: 142  FILENKVILESTKCSNYFIKTIIFC 68
            ++L +    E  KC++ +IK  +FC
Sbjct: 1017 YLLSSS*KYERIKCAS*YIKNKLFC 943



 Score = 21.7 bits (41), Expect(2) = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3 / -2

                       
Query: 40  PPICTSPSRASP 5
           PP   SPSR SP
Sbjct: 421 PPALQSPSRLSP 386



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>LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putative, expressed|
          Length = 8085

 Score = 24.9 bits (48), Expect(2) = 6.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2 / +2

                                      
Query: 110  NKMFKLLYKDYNFLLI*NLMNHISSN 33
            N M  L Y+D +FLLI  L+N   +N
Sbjct: 6488 NLMNNLFYQDTSFLLIEPLLNKPITN 6565



 Score = 23.1 bits (44), Expect(2) = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3 / +3

                        
Query: 196  FFFRLSICTNIC 161
            F+F + +C NIC
Sbjct: 1242 FYFTILVCQNIC 1277



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>LOC_Os04g47400:12004.t04266:unspliced-genomic pollen-specific protein NTP303 precursor, putative, expressed|
          Length = 3395

 Score = 23.5 bits (45), Expect(2) = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3 / +2

                        
Query: 40   PPICTSPSRASP 5
            PP C +P+RA P
Sbjct: 1928 PPSCATPARAPP 1963



 Score = 23.1 bits (44), Expect(2) = 7.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1 / +1

                        
Query: 132 RIKLSWSQQNVQI 94
           R+ LSW  QNV++
Sbjct: 616 RLDLSWGTQNVEV 654



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>LOC_Os11g22130:12011.t01883:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 2189

 Score = 28.1 bits (55), Expect = 8.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2 / -1

                                  
Query: 200  FFFF*IINLHKYMSYIFLNIHI 135
            FFFF  I LH YMS  F +  I
Sbjct: 1955 FFFFFTIMLHTYMSIFFFSFCI 1890



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>LOC_Os08g33488:12008.t03089:unspliced-genomic MADS-box transcription factor 23, putative, expressed|
          Length = 9654

 Score = 28.1 bits (55), Expect = 8.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2 / +2

                                     
Query: 200  FFFF*IINLHKYMSYIFLNIHIGE* 126
            FFFF  I+  KY  YIF  I I +*
Sbjct: 6830 FFFFPDISFSKYTQYIFF*IFISQ* 6904



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>LOC_Os05g09000:12005.t00777:unspliced-genomic expressed protein|
          Length = 3363

 Score = 28.1 bits (55), Expect = 8.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3 / -2

                              
Query: 172  TNICHIFS*IFILENKVI 119
            T  CH+ + IFIL+NK++
Sbjct: 2606 TTCCHLMTVIFILQNKLV 2553



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>LOC_Os11g26970:12011.t02312:unspliced-genomic hypothetical protein|
          Length = 2097

 Score = 28.1 bits (55), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1 / +3

                              
Query: 201  FFFFLDYQFAQIYVIYFL 148
            F F LDY F + Y+I+F+
Sbjct: 1779 FSFLLDYTFLEAYLIFFM 1832



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>LOC_Os09g19820:12009.t01716:unspliced-genomic aminopeptidase-like protein, putative, expressed|
          Length = 4189

 Score = 28.1 bits (55), Expect = 8.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1 / +2

                                  
Query: 156  YFLKYSYWRIKLSWSQQNVQIT 91
            YFL  SY+ I   W  QN+ +T
Sbjct: 3320 YFLTKSYYTISQQWDIQNILLT 3385



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>LOC_Os07g07160:12007.t00594:unspliced-genomic hypothetical protein|
          Length = 1236

 Score = 28.1 bits (55), Expect = 8.9
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -1 / -2

                                   
Query: 201 FFFFLDYQFAQIYVIYFLKYSYWR 130
           ++++  Y +   Y  YFL++SY++
Sbjct: 515 YYYYYYYYYYYYYYYYFLRFSYYK 444



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>LOC_Os02g57870:12002.t05358:unspliced-genomic expressed protein|
          Length = 2274

 Score = 28.1 bits (55), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1 / +1

                                
Query: 75   FFVNMKPYESYFLQYVRLPV 16
            F +N+KP+ S+F  Y+ L +
Sbjct: 1516 FLINLKPHSSFFFYYLYLQI 1575



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>LOC_Os10g34400:12010.t02738:unspliced-genomic expressed protein|
          Length = 8998

 Score = 25.8 bits (50), Expect(2) = 9.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3 / +1

                         
Query: 196  FFFRLSICTNICH 158
            F F LSICT  CH
Sbjct: 3577 FLFLLSICTKECH 3615



 Score = 21.7 bits (41), Expect(2) = 9.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3 / +1

                         
Query: 100  SNYFIKTIIFC*Y 62
            SNY I T  FC Y
Sbjct: 5992 SNYLIFTFFFCFY 6030


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 70,230,680
Number of extensions: 1049291
Number of successful extensions: 3619
Number of sequences better than 10.0: 28
Length of query: 67
Length of database: 55,613,886
Length adjustment: 43
Effective length of query: 24
Effective length of database: 53,193,932
Effective search space: 1276654368
Effective search space used: 1276654368
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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