| Clone Name | FLbaf18j03 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g30320:12006.t02736:unspliced-genomic nucleolar complex-associated protein, expressed| Length = 6822 Score = 32.2 bits (64), Expect = 0.49 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 / -2 Query: 112 STKCSNYFIKTIIFC*YETL*IIFPPICTS 23 S KC KT IFC*+ IFPP C S Sbjct: 6818 SNKCVL*HSKTWIFC*WTVKPTIFPPFCAS 6729
>LOC_Os11g46240:12011.t04148:unspliced-genomic ATP binding protein, putative, expressed| Length = 6759 Score = 31.8 bits (63), Expect = 0.67 Identities = 11/37 (29%), Positives = 25/37 (67%) Frame = -2 / +2 Query: 122 YPGVNKMFKLLYKDYNFLLI*NLMNHISSNMYVSQSG 12 Y V+ + ++L+++ ++LLI N ++HI S +++ G Sbjct: 1154 YHSVSSVARVLFQNNSYLLIINFLDHIISQIFLELEG 1264
>LOC_Os02g04080:12002.t00307:unspliced-genomic TTN7, putative| Length = 6148 Score = 31.8 bits (63), Expect = 0.67 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -3 / +1 Query: 196 FFFRLSICTNICHIFS*IFILENKVILE 113 F F + TN+C ++ *IF+L ++LE Sbjct: 3037 FLFLIDNLTNVCFVYC*IFLLLGMIVLE 3120
>LOC_Os06g11640:12006.t01041:unspliced-genomic serine/threonine-protein phosphatase 2A activator 2, putative,| expressed Length = 4745 Score = 26.7 bits (52), Expect(2) = 1.3 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -1 / +3 Query: 201 FFFFLDYQFAQIYVIYFLK 145 FFF L Y+F ++ ++F K Sbjct: 3165 FFFILQYEFNIVFYVHFTK 3221 Score = 23.1 bits (44), Expect(2) = 1.3 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -3 / +1 Query: 136 LENKVILESTKCSNYFIKTIIFC*YE 59 +ENK++ +T CSN + + C Y+ Sbjct: 3541 IENKLLGLATCCSN*KLNFCVLCHYK 3618
>LOC_Os05g27450:12005.t02396:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 7138 Score = 28.6 bits (56), Expect(2) = 1.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -3 / -3 Query: 199 FFFFRLSICTNICHIFS*IFIL 134 FFF RL + NICH+ IF L Sbjct: 6677 FFFVRLCLR*NICHVRQKIFCL 6612 Score = 21.7 bits (41), Expect(2) = 1.4 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = -3 / -3 Query: 142 FILENKVILESTKCSNYFIKTII 74 +I NK+ L KC + I+T + Sbjct: 4979 YIYMNKIYLHYRKCVHMHIETYV 4911
>LOC_Os08g41270:12008.t03856:unspliced-genomic inositol 1,4,5-trisphosphate 5-phosphatase, putative, expressed| Length = 7376 Score = 29.9 bits (59), Expect = 2.4 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 / +3 Query: 116 GVNKMFKLLYKDYNFLLI*NLMNHISSNMYVSQSGVT 6 G +K L D+N LI NLM + SS Y + GVT Sbjct: 5199 GESKTHMLFCLDHNHSLIHNLMFYCSSGRYEACMGVT 5309
>LOC_Os10g30990:12010.t02429:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2971 Score = 29.0 bits (57), Expect = 4.5 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -3 / -1 Query: 142 FILENKVILESTKCSNYFIKTIIFC*YETL*IIFPPI 32 F+L+NK T CS+ KT+ + +++*II P I Sbjct: 874 FLLKNKPFFGPTYCSHGNRKTVTYLLLQSI*IIRPSI 764
>LOC_Os09g18159:12009.t01599:unspliced-genomic light repressible receptor protein kinase, putative, expressed| Length = 20467 Score = 29.0 bits (57), Expect = 4.5 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 / -1 Query: 193 FFRLSICTNICHIFS*IFILENKVILESTKCSNYFI 86 + RLS+ +I H *IF EN++IL K ++ +I Sbjct: 17503 WMRLSLHAHIWHSKY*IFFTENRLILSMVKHNSNYI 17396
>LOC_Os03g46220:12003.t03990:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5778 Score = 29.0 bits (57), Expect = 4.5 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 / -3 Query: 40 PPICTSPSRASP 5 PP CTSP+RASP Sbjct: 1963 PPPCTSPTRASP 1928
>LOC_Os12g04270:12012.t00316:unspliced-genomic expressed protein| Length = 3493 Score = 28.6 bits (56), Expect = 6.2 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 / +3 Query: 199 FFFFRLSICTNICHI 155 F FF L+ C NICH+ Sbjct: 3039 FIFFGLTPCANICHL 3083
>LOC_Os11g04500:12011.t00343:unspliced-genomic expressed protein| Length = 3506 Score = 28.6 bits (56), Expect = 6.2 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 / +3 Query: 199 FFFFRLSICTNICHI 155 F FF L+ C NICH+ Sbjct: 3039 FIFFGLTPCANICHL 3083
>LOC_Os10g03990:12010.t00288:unspliced-genomic receptor-like kinase, putative| Length = 2393 Score = 28.6 bits (56), Expect = 6.2 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = -2 / +3 Query: 188 *IINLHKYMSYIFLNIHIGE*SYPGVNKMFKLLYKDYNFLLI*NLMN 48 *+ N+H M YI++ I+I Y N + +Y F++I ++ N Sbjct: 1731 *LTNIHTRMLYIYIYIYIYLYIYIWYNLLNSFIYMYIRFIIIKDIAN 1871
>LOC_Os06g19090:12006.t01732:unspliced-genomic hypothetical protein| Length = 3301 Score = 28.6 bits (56), Expect = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 / -1 Query: 113 LQDNFILQYEYLRKYMTYIC 172 LQ + I +YLR MTYIC Sbjct: 3076 LQSSLINYLQYLRSMMTYIC 3017
>LOC_Os01g47410:12001.t04189:unspliced-genomic aspartic proteinase oryzasin-1 precursor, putative, expressed| Length = 6496 Score = 28.6 bits (56), Expect = 6.2 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 / +1 Query: 200 FFFF*IINLHKYMSYIFL 147 FF+F I +LH +SYIFL Sbjct: 5197 FFYFRIYSLHPKVSYIFL 5250
>LOC_Os11g11070:12011.t00995:unspliced-genomic mRNA capping enzyme, putative, expressed| Length = 12776 Score = 28.6 bits (56), Expect = 6.5 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 / +1 Query: 159 IYFLKYSYWRIKLSW 115 I +LK YW IKLSW Sbjct: 9868 IVYLKARYWDIKLSW 9912
>LOC_Os03g15020:12003.t01288:unspliced-genomic beta-galactosidase precursor, putative, expressed| Length = 6223 Score = 28.6 bits (56), Expect = 6.5 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 / -2 Query: 174 AQIYVIYFLKYSYWRIKLSWS 112 AQ+ I K+SYW ++++WS Sbjct: 5058 AQLNDIITKKFSYWNMRINWS 4996
>LOC_Os02g29850:12002.t02678:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4158 Score = 28.6 bits (56), Expect = 6.5 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = -1 / -1 Query: 201 FFFFLDYQFAQIYVIYFLKYSYWRIK 124 FFF L + A +Y+ +F +WR K Sbjct: 3798 FFFLLLHSHASLYLCFFSLKEFWRKK 3721
>LOC_Os02g36720:12002.t03309:unspliced-genomic hypothetical protein| Length = 1166 Score = 22.6 bits (43), Expect(2) = 6.5 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = -3 / -3 Query: 142 FILENKVILESTKCSNYFIKTIIFC 68 ++L + E KC++ +IK +FC Sbjct: 1017 YLLSSS*KYERIKCAS*YIKNKLFC 943 Score = 21.7 bits (41), Expect(2) = 6.5 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -3 / -2 Query: 40 PPICTSPSRASP 5 PP SPSR SP Sbjct: 421 PPALQSPSRLSP 386
>LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putative, expressed| Length = 8085 Score = 24.9 bits (48), Expect(2) = 6.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 / +2 Query: 110 NKMFKLLYKDYNFLLI*NLMNHISSN 33 N M L Y+D +FLLI L+N +N Sbjct: 6488 NLMNNLFYQDTSFLLIEPLLNKPITN 6565 Score = 23.1 bits (44), Expect(2) = 6.6 Identities = 6/12 (50%), Positives = 9/12 (75%) Frame = -3 / +3 Query: 196 FFFRLSICTNIC 161 F+F + +C NIC Sbjct: 1242 FYFTILVCQNIC 1277
>LOC_Os04g47400:12004.t04266:unspliced-genomic pollen-specific protein NTP303 precursor, putative, expressed| Length = 3395 Score = 23.5 bits (45), Expect(2) = 7.6 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = -3 / +2 Query: 40 PPICTSPSRASP 5 PP C +P+RA P Sbjct: 1928 PPSCATPARAPP 1963 Score = 23.1 bits (44), Expect(2) = 7.6 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -1 / +1 Query: 132 RIKLSWSQQNVQI 94 R+ LSW QNV++ Sbjct: 616 RLDLSWGTQNVEV 654
>LOC_Os11g22130:12011.t01883:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2189 Score = 28.1 bits (55), Expect = 8.5 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 / -1 Query: 200 FFFF*IINLHKYMSYIFLNIHI 135 FFFF I LH YMS F + I Sbjct: 1955 FFFFFTIMLHTYMSIFFFSFCI 1890
>LOC_Os08g33488:12008.t03089:unspliced-genomic MADS-box transcription factor 23, putative, expressed| Length = 9654 Score = 28.1 bits (55), Expect = 8.5 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 / +2 Query: 200 FFFF*IINLHKYMSYIFLNIHIGE* 126 FFFF I+ KY YIF I I +* Sbjct: 6830 FFFFPDISFSKYTQYIFF*IFISQ* 6904
>LOC_Os05g09000:12005.t00777:unspliced-genomic expressed protein| Length = 3363 Score = 28.1 bits (55), Expect = 8.5 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = -3 / -2 Query: 172 TNICHIFS*IFILENKVI 119 T CH+ + IFIL+NK++ Sbjct: 2606 TTCCHLMTVIFILQNKLV 2553
>LOC_Os11g26970:12011.t02312:unspliced-genomic hypothetical protein| Length = 2097 Score = 28.1 bits (55), Expect = 8.9 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -1 / +3 Query: 201 FFFFLDYQFAQIYVIYFL 148 F F LDY F + Y+I+F+ Sbjct: 1779 FSFLLDYTFLEAYLIFFM 1832
>LOC_Os09g19820:12009.t01716:unspliced-genomic aminopeptidase-like protein, putative, expressed| Length = 4189 Score = 28.1 bits (55), Expect = 8.9 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -1 / +2 Query: 156 YFLKYSYWRIKLSWSQQNVQIT 91 YFL SY+ I W QN+ +T Sbjct: 3320 YFLTKSYYTISQQWDIQNILLT 3385
>LOC_Os07g07160:12007.t00594:unspliced-genomic hypothetical protein| Length = 1236 Score = 28.1 bits (55), Expect = 8.9 Identities = 7/24 (29%), Positives = 16/24 (66%) Frame = -1 / -2 Query: 201 FFFFLDYQFAQIYVIYFLKYSYWR 130 ++++ Y + Y YFL++SY++ Sbjct: 515 YYYYYYYYYYYYYYYYFLRFSYYK 444
>LOC_Os02g57870:12002.t05358:unspliced-genomic expressed protein| Length = 2274 Score = 28.1 bits (55), Expect = 8.9 Identities = 8/20 (40%), Positives = 14/20 (70%) Frame = -1 / +1 Query: 75 FFVNMKPYESYFLQYVRLPV 16 F +N+KP+ S+F Y+ L + Sbjct: 1516 FLINLKPHSSFFFYYLYLQI 1575
>LOC_Os10g34400:12010.t02738:unspliced-genomic expressed protein| Length = 8998 Score = 25.8 bits (50), Expect(2) = 9.6 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -3 / +1 Query: 196 FFFRLSICTNICH 158 F F LSICT CH Sbjct: 3577 FLFLLSICTKECH 3615 Score = 21.7 bits (41), Expect(2) = 9.6 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -3 / +1 Query: 100 SNYFIKTIIFC*Y 62 SNY I T FC Y Sbjct: 5992 SNYLIFTFFFCFY 6030 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 70,230,680 Number of extensions: 1049291 Number of successful extensions: 3619 Number of sequences better than 10.0: 28 Length of query: 67 Length of database: 55,613,886 Length adjustment: 43 Effective length of query: 24 Effective length of database: 53,193,932 Effective search space: 1276654368 Effective search space used: 1276654368 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)