ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf21h16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066218.1| Oryza sativa (japonica cultivar-group) Os07g0492100 (Os07g0492100) mRNA, complete cds Length = 4056 Score = 2101 bits (1060), Expect = 0.0 Identities = 1859/2127 (87%), Gaps = 3/2127 (0%) Strand = Plus / Plus Query: 932 actagaaatggaggaaaatgaagggtgtgccccaaggaagtactatgagtatttgcactc 991 ||||||||| ||||||||||||||||||| |||| ||||||||| || |||||||| || Sbjct: 862 actagaaattgaggaaaatgaagggtgtgttccaaagaagtactacgaatatttgcagtc 921 Query: 992 cctaaatgacaagcagagggaggcttcatgtagtgatgtagctgttccgttaatgatcgt 1051 ||| ||||||| ||||||||| ||| ||||||||||||| || |||| ||||||| || Sbjct: 922 cctgaatgacaggcagagggaagctgcatgtagtgatgtgactattccactaatgatagt 981 Query: 1052 tgcaggtccaggaagtggaaagacttctacaatggttggtagggttctcacattgctgaa 1111 ||| |||||||||||||||||||| || |||||||||||| |||| |||||| |||| || Sbjct: 982 tgctggtccaggaagtggaaagacatcaacaatggttggtcgggtgctcacactgctcaa 1041 Query: 1112 agagggaatttcaccatcaaacatccttgctatgacattcacaactgctgctgcctcaga 1171 ||||| | || ||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 1042 agaggaatttccaccatcaaacattcttgctatgacattcacaactgctgctgcttctga 1101 Query: 1172 aatgagggaccggataggggcagtggtcgggaaggcagttgccaaagagatcataataag 1231 |||| |||| || || ||| ||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1102 aatgcgggatcgaattgggacagtggtggggaaggcagttgccaaggagattgtaataag 1161 Query: 1232 cacatttcactccttctgcttgcagctttgcaggacccatgctgaaaagctaggccgtac 1291 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1162 cacatttcactcattctgcttgcagctttgcaggacccatgctgaaaagctaggccgcac 1221 Query: 1292 atctgaattcataatatatggccatgggcaacagaggagggccattgttgaggcagaacg 1351 ||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||| || Sbjct: 1222 atctgaattcataatctatggaaatgggcagcagaggagggctgttattgaggcagagcg 1281 Query: 1352 cctgttggagcatggcaaaagtgatggtttaggagatgcagttaagcagtgtgatggaga 1411 || ||||| || ||||| | ||||| ||||||||||| |||| | || |||||||| Sbjct: 1282 tctattggaaagtgacaaaaataatggtctaggagatgcaaataagaattgcgatggaga 1341 Query: 1412 cattaaaaattcctttaaagacaaagctaagaagtggttgaagtttgttacacaggcgaa 1471 ||||||||||| || || |||||||||||||| ||| |||||||||||||||||| || Sbjct: 1342 tattaaaaattctttcaaggacaaagctaagaaatggcagaagtttgttacacaggcaaa 1401 Query: 1472 atcttcaggacaaactcccgaagaatatgaaaagaagggggatttgacaggagcttcgat 1531 | |||| || |||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 1402 agcttctggtaggactcccgaggagtatgaaaagaagggggatttgacaggagcttcaat 1461 Query: 1532 tcttcggcactacaatgaaatactagtgtcttgtaatgctcttgattatcatgattttat 1591 |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct: 1462 tcttcggcactacaatgaaatattaaggtcttgtaatgctcttgattaccatgattttat 1521 Query: 1592 taactcatccataactcttctcacgaagtttcctgaagtatacaaagagtgccaaaccac 1651 ||| ||||| ||||| |||||||| |||||||||||||||||| | ||||||| || || Sbjct: 1522 taattcatcgataacccttctcacaaagtttcctgaagtatacgacgagtgccgaaatac 1581 Query: 1652 atgtcaggcaatagtagttgatgagtttcaggataccagtgctatgcaatattttcttct 1711 ||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1582 atggcaggcaatagtagttgatgagtttcaggatacaagtgctatgcaatattatctttt 1641 Query: 1712 gaaacttctagcttctcacaatcatataaccattgttggtgatgaagatcagtccatctt 1771 || ||||| || ||||| | ||||| ||||||||||| ||||||||||||||||| Sbjct: 1642 aaagacactagcatcccacaaccgcataactattgttggtgacgaagatcagtccatctt 1701 Query: 1772 cagtttcaatggtgccgatgtttctggctttgattcatttcgtagagactttccaaatca 1831 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 1702 cagtttcaatggtgctgatgtctctggctttgattcatttcgtagagattttccaaatca 1761 Query: 1832 taaagagatcaggttaaacaagaactaccgctctacacgggcaattgttgaagcagcaac 1891 |||||| |||| || | ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1762 caaagaggtcagattgagcaagaactatcgctctacacgggcaattgttgaagcagcaac 1821 Query: 1892 agcccttattcgcaacaacactaaccggtgtcatcataaacttgttgagacagacaaccc 1951 ||| | |||| |||||||||||| ||| || ||||||| |||||| ||||| || Sbjct: 1822 agctttaattcacaacaacactaaacggcaaagccacaaacttgctgagaccgacaatcc 1881 Query: 1952 ttctggaagtaagatcactgttaaggagtgccatagtgaagattcacaatgtgcgtttgt 2011 ||||| | |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1882 ctctgggaataagatcattgttaaggagtgccacagtgaagattcacaatgtgcatttgt 1941 Query: 2012 cattgacaaaatcattgaaactacatctagttcagctgaaggtcgcgactttggtaaaat 2071 |||||||| || |||||||| ||||||||||||| |||||| | | ||||| ||||| Sbjct: 1942 tattgacaagattattgaaaccacatctagttcagttgaaggatgtcattttggcaaaat 2001 Query: 2072 tgctgtcctatatcgaagacagataactggcaaagcattccaagtgtcattccgcaacag 2131 ||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| Sbjct: 2002 tgctgtcctatatcgcagacagatcactggcaaagcattccaggcgtcattccgcaacag 2061 Query: 2132 gaaaataccctttaatgttcatggtgtggctttctaccggaaaaaggttatcaaagctat 2191 ||||| || |||||| |||||||||||||||||||| ||||||||||||||||||| || Sbjct: 2062 aaaaattccttttaatattcatggtgtggctttctacaggaaaaaggttatcaaagcaat 2121 Query: 2192 tatggcaatacttagaaccacattacctggttgtgacgatgg---cccatggcgtcaggc 2248 |||||| ||||||| ||| |||||||| || ||||| |||| |||||||| ||| || Sbjct: 2122 tatggccatacttaaaactacattaccaggctgtgatgatgatgccccatggcatcaagc 2181 Query: 2249 cttaaagatccttttgcctggtgacaaggaagnnnnnnngaagattatagatcacgtgga 2308 ||| ||| | || | |||||||||||||||| |||||||||| |||| | || Sbjct: 2182 cttcaaggccattcttcctggtgacaaggaagaaaaaaagaagattatacatcatattga 2241 Query: 2309 aaagatttcgttggctagaaagtgtagcttcatatcagctgctactgacatcttcagtgc 2368 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2242 aaagatttcattggctagaaagtgtagcttcatatcggctgctactgacatcttcagtgc 2301 Query: 2369 aaaggtctcggggaccttcaaaagggcccagattactcaagggcgtaaggttttatcgac 2428 ||||||||| || ||||||||||||||||||||||||||||| | ||||||||||| | Sbjct: 2302 aaaggtctctggtaccttcaaaagggcccagattactcaaggaagaaaggttttatcagc 2361 Query: 2429 cttgtatagcctatcaaaatttgttgagagggaacaatcagtttcagctatcatttcctc 2488 |||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||| || Sbjct: 2362 cttggatagcctatcaaaacttgttgaaagggaacaatcagtttcagtggtcatttcttc 2421 Query: 2489 tgcaggaaatatgctacctcagcaatatctcctcgaaaaacgtgcagttattgataatga 2548 ||| ||| |||||||||||||| |||| || || ||||| ||||| || ||||| ||| Sbjct: 2422 tgctggagatatgctacctcagaaatacctacttgaaaagcgtgcgattgttgatgctga 2481 Query: 2549 tggtggtaaattgttaaatgaagacaatgacatcagatctgtacttcagtttttaatgga 2608 ||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 2482 tgggggtaaattattaaatgaagataatgacatcagatcagtccttcagtttttaatgga 2541 Query: 2609 tgatgtgtctgatttcttgtcaacacacttttctagttcagggggtgcaagccagactga 2668 |||||||||||| ||||| |||||||| ||||||||||||| || | ||||| ||||||| Sbjct: 2542 tgatgtgtctgacttcttatcaacacatttttctagttcagtggatacaagcaagactga 2601 Query: 2669 ggagaaaggctgcactgctacacttaaagccttcattgattacatttctttgagggaaac 2728 |||||||||||| || |||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 2602 ggagaaaggctgtgcttctacacttaaagcctttattgattatatctctttgagagaaac 2661 Query: 2729 agaaaattttagatcccggaaggaggaaaataagaactccatcacattaacaactattca 2788 ||||| || ||||| || |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 2662 tgaaaacttcagatcacgaaaggaggaaaataaaaactctatcacattaacaactatcca 2721 Query: 2789 tcagtcaaaaggtttagagtgggatgttgtgttcatcgtgcaggtaaatgattcagaaat 2848 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 2722 ccagtcaaaaggtttagagtgggatgttgtgtttatcgtgcaggcaaatgattcagaaat 2781 Query: 2849 ccccttgctgcatgagtacaatggcactgtgaaagaagctggatgcacattggaggagga 2908 || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 2782 tcctttgttgcatgagtacaatggcactgtgaaagaagctggaagcacactggaggagga 2841 Query: 2909 gaggaggctattctatgttgcaatgacacgagctcggaagaaattgtacatcttgcatgt 2968 ||| |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 2842 gagaaggctattctatgttgcaatgacacgagctcgaaagaaactgtacatcttacatgt 2901 Query: 2969 cacaattgactctcatcgccagctgctgccaccttcacgtttcctgagagagattccagg 3028 ||| |||||||| ||||||||||||||| ||||||||| ||||| || |||||||| | Sbjct: 2902 cacggttgactctaatcgccagctgctgcaaccttcacgcttcctcagggagattcctgc 2961 Query: 3029 tcaccttctcgacatacagggtgaggg 3055 ||||||||| || ||||||||||||| Sbjct: 2962 tcaccttcttgaggtacagggtgaggg 2988 Score = 517 bits (261), Expect = e-143 Identities = 423/477 (88%) Strand = Plus / Plus Query: 3149 gaatgaaacttcaccttaccctgaaccgatgcagtcatgccttgctaatgatttcttgaa 3208 ||||||||||||||||| ||| ||| | ||| |||| |||||||||||||||||||| Sbjct: 3079 gaatgaaacttcacctttcccagaaatggatcagccatgtcttgctaatgatttcttgaa 3138 Query: 3209 gaggttcgaaattgatgatcgagcagtagtctcacatatatttcatcattgggcgaagaa 3268 |||||| |||||||| ||| ||||| || | ||||||||||||||||| ||||||||||| Sbjct: 3139 gaggtttgaaattgaggatagagcaataatttcacatatatttcatcaatgggcgaagaa 3198 Query: 3269 gcaggcatttcaaattccaaagagactgcttgataagatcaaatttgtgatcgatgaacg 3328 ||||||||||||| |||||| || |||||||||||||| ||||| || |||||||| Sbjct: 3199 acaggcatttcaaaatccaaaaaggctgcttgataagattggttttgttattgatgaacg 3258 Query: 3329 cctgcgtggtaaagggtacaagcgcaaggatgtcttgtgcaagctgaagtcattgttaag 3388 | || |||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 3259 tttacgaggtaaaggatacaagcgcaaggatgtattgtgcaagctgaaatcattcttaag 3318 Query: 3389 cgacgatgaagcgcttggttacgcagaatatgttatcaagtgggaacaaattcctatcga 3448 | ||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||| Sbjct: 3319 tggtgatgaagcgtttggttatgcacaatatgttatcaagtgggaacagattcctatcga 3378 Query: 3449 caagcgaagccatttgatgagagagagacaggaacatttccagaagcagaggatagagaa 3508 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3379 caagcggagccatttgatgagagagagacaggaacatttccaaaagcagaggatagagaa 3438 Query: 3509 ctccatgggttcttcagagcctacacctaagcagatatcctacctccggagcctggggtg 3568 |||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 3439 ctccatgggttcctcagaacctacacctaagcagatatcgtacctccggaacctggggtg 3498 Query: 3569 caccataacacccacgtctcgtctccacgcgtccaatcttattgagaagtataaatc 3625 |||||| |||||||||||||| || |||||||| ||||||| |||||||| ||||| Sbjct: 3499 caccatcacacccacgtctcgcctgcacgcgtcgcatcttatcgagaagtacaaatc 3555 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 329 catggacgaggcgttcttgcttgaggtggacgccatctgcgaggagcactcgcggtccat 388 |||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||| Sbjct: 328 catggacgaggcgttcctgcgggaggtggacgccatttgcgaggagcacgagcggtcctc 387 Query: 389 ggcctggaaggataagg 405 |||| |||||||||||| Sbjct: 388 ggccaggaaggataagg 404 Score = 46.1 bits (23), Expect = 0.97 Identities = 47/55 (85%) Strand = Plus / Plus Query: 177 tgcccgccgccccgccagccgctcgccgatgttacggtcaacgccctgcagcagc 231 ||||||||||| |||| ||||||||||| || || | ||||||||||| ||||| Sbjct: 176 tgcccgccgccgcgccgcccgctcgccgacgtcaccggcaacgccctgcggcagc 230
>dbj|AK067461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102E06, full insert sequence Length = 4056 Score = 2093 bits (1056), Expect = 0.0 Identities = 1858/2127 (87%), Gaps = 3/2127 (0%) Strand = Plus / Plus Query: 932 actagaaatggaggaaaatgaagggtgtgccccaaggaagtactatgagtatttgcactc 991 ||||||||| ||||||||||||||||||| |||| ||||||||| || |||||||| || Sbjct: 862 actagaaattgaggaaaatgaagggtgtgttccaaagaagtactacgaatatttgcagtc 921 Query: 992 cctaaatgacaagcagagggaggcttcatgtagtgatgtagctgttccgttaatgatcgt 1051 ||| ||||||| ||||||||| ||| ||||||||||||| || |||| ||||||| || Sbjct: 922 cctgaatgacaggcagagggaagctgcatgtagtgatgtgactattccactaatgatagt 981 Query: 1052 tgcaggtccaggaagtggaaagacttctacaatggttggtagggttctcacattgctgaa 1111 ||| |||||||||||||||||||| || |||||||||||| |||| |||||| |||| || Sbjct: 982 tgctggtccaggaagtggaaagacatcaacaatggttggtcgggtgctcacactgctcaa 1041 Query: 1112 agagggaatttcaccatcaaacatccttgctatgacattcacaactgctgctgcctcaga 1171 ||||| | || ||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 1042 agaggaatttccaccatcaaacattcttgctatgacattcacaactgctgctgcttctga 1101 Query: 1172 aatgagggaccggataggggcagtggtcgggaaggcagttgccaaagagatcataataag 1231 |||| |||| || || ||| ||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1102 aatgcgggatcgaattgggacagtggtggggaaggcagttgccaaggagattgtaataag 1161 Query: 1232 cacatttcactccttctgcttgcagctttgcaggacccatgctgaaaagctaggccgtac 1291 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1162 cacatttcactcattctgcttgcagctttgcaggacccatgctgaaaagctaggccgcac 1221 Query: 1292 atctgaattcataatatatggccatgggcaacagaggagggccattgttgaggcagaacg 1351 ||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||| || Sbjct: 1222 atctgaattcataatctatggaaatgggcagcagaggagggctgttattgaggcagagcg 1281 Query: 1352 cctgttggagcatggcaaaagtgatggtttaggagatgcagttaagcagtgtgatggaga 1411 || ||||| || ||||| | ||||| ||||||||||| |||| | || |||||||| Sbjct: 1282 tctattggaaagtgacaaaaataatggtctaggagatgcaaataagaattgcgatggaga 1341 Query: 1412 cattaaaaattcctttaaagacaaagctaagaagtggttgaagtttgttacacaggcgaa 1471 ||||||||||| || || |||||||||||||| ||| |||||||||||||||||| || Sbjct: 1342 tattaaaaattctttcaaggacaaagctaagaaatggcagaagtttgttacacaggcaaa 1401 Query: 1472 atcttcaggacaaactcccgaagaatatgaaaagaagggggatttgacaggagcttcgat 1531 | |||| || |||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 1402 agcttctggtaggactcccgaggagtatgaaaagaagggggatttgacaggagcttcaat 1461 Query: 1532 tcttcggcactacaatgaaatactagtgtcttgtaatgctcttgattatcatgattttat 1591 |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct: 1462 tcttcggcactacaatgaaatattaaggtcttgtaatgctcttgattaccatgattttat 1521 Query: 1592 taactcatccataactcttctcacgaagtttcctgaagtatacaaagagtgccaaaccac 1651 ||| ||||| ||||| |||||||| |||||||||||||||||| | ||||||| || || Sbjct: 1522 taattcatcgataacccttctcacaaagtttcctgaagtatacgacgagtgccgaaatac 1581 Query: 1652 atgtcaggcaatagtagttgatgagtttcaggataccagtgctatgcaatattttcttct 1711 ||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1582 atggcaggcaatagtagttgatgagtttcaggatacaagtgctatgcaatattatctttt 1641 Query: 1712 gaaacttctagcttctcacaatcatataaccattgttggtgatgaagatcagtccatctt 1771 || ||||| || ||||| | ||||| ||||||||||| ||||||||||||||||| Sbjct: 1642 aaagacactagcatcccacaaccgcataactattgttggtgacgaagatcagtccatctt 1701 Query: 1772 cagtttcaatggtgccgatgtttctggctttgattcatttcgtagagactttccaaatca 1831 ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 1702 cagtttcaatggtgctgatgtctctggctttgattcatttcgtagagattttccaaaaca 1761 Query: 1832 taaagagatcaggttaaacaagaactaccgctctacacgggcaattgttgaagcagcaac 1891 |||||| |||| || | ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1762 caaagaggtcagattgagcaagaactatcgctctacacgggcaattgttgaagcagcaac 1821 Query: 1892 agcccttattcgcaacaacactaaccggtgtcatcataaacttgttgagacagacaaccc 1951 ||| | |||| |||||||||||| ||| || ||||||| |||||| ||||| || Sbjct: 1822 agctttaattcacaacaacactaaacggcaaagccacaaacttgctgagaccgacaatcc 1881 Query: 1952 ttctggaagtaagatcactgttaaggagtgccatagtgaagattcacaatgtgcgtttgt 2011 ||||| | |||||||| ||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1882 ctctgggaataagatcattgttaaggagtgccacagtgaagattcacaatgtgcatttgt 1941 Query: 2012 cattgacaaaatcattgaaactacatctagttcagctgaaggtcgcgactttggtaaaat 2071 |||||||| || |||||||| ||||||||||||| |||||| | | ||||| ||||| Sbjct: 1942 tattgacaagattattgaaaccacatctagttcagttgaaggatgtcattttggcaaaat 2001 Query: 2072 tgctgtcctatatcgaagacagataactggcaaagcattccaagtgtcattccgcaacag 2131 ||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| Sbjct: 2002 tgctgtcctatatcgcagacagatcactggcaaagcattccaggcgtcattccgcaacag 2061 Query: 2132 gaaaataccctttaatgttcatggtgtggctttctaccggaaaaaggttatcaaagctat 2191 ||||| || |||||| |||||||||||||||||||| ||||||||||||||||||| || Sbjct: 2062 aaaaattccttttaatattcatggtgtggctttctacaggaaaaaggttatcaaagcaat 2121 Query: 2192 tatggcaatacttagaaccacattacctggttgtgacgatgg---cccatggcgtcaggc 2248 |||||| ||||||| ||| |||||||| || ||||| |||| |||||||| ||| || Sbjct: 2122 tatggccatacttaaaactacattaccaggctgtgatgatgatgccccatggcatcaagc 2181 Query: 2249 cttaaagatccttttgcctggtgacaaggaagnnnnnnngaagattatagatcacgtgga 2308 ||| ||| | || | |||||||||||||||| |||||||||| |||| | || Sbjct: 2182 cttcaaggccattcttcctggtgacaaggaagaaaaaaagaagattatacatcatattga 2241 Query: 2309 aaagatttcgttggctagaaagtgtagcttcatatcagctgctactgacatcttcagtgc 2368 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2242 aaagatttcattggctagaaagtgtagcttcatatcggctgctactgacatcttcagtgc 2301 Query: 2369 aaaggtctcggggaccttcaaaagggcccagattactcaagggcgtaaggttttatcgac 2428 ||||||||| || ||||||||||||||||||||||||||||| | ||||||||||| | Sbjct: 2302 aaaggtctctggtaccttcaaaagggcccagattactcaaggaagaaaggttttatcagc 2361 Query: 2429 cttgtatagcctatcaaaatttgttgagagggaacaatcagtttcagctatcatttcctc 2488 |||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||| || Sbjct: 2362 cttggatagcctatcaaaacttgttgaaagggaacaatcagtttcagtggtcatttcttc 2421 Query: 2489 tgcaggaaatatgctacctcagcaatatctcctcgaaaaacgtgcagttattgataatga 2548 ||| ||| |||||||||||||| |||| || || ||||| ||||| || ||||| ||| Sbjct: 2422 tgctggagatatgctacctcagaaatacctacttgaaaagcgtgcgattgttgatgctga 2481 Query: 2549 tggtggtaaattgttaaatgaagacaatgacatcagatctgtacttcagtttttaatgga 2608 ||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 2482 tgggggtaaattattaaatgaagataatgacatcagatcagtccttcagtttttaatgga 2541 Query: 2609 tgatgtgtctgatttcttgtcaacacacttttctagttcagggggtgcaagccagactga 2668 |||||||||||| ||||| |||||||| ||||||||||||| || | ||||| ||||||| Sbjct: 2542 tgatgtgtctgacttcttatcaacacatttttctagttcagtggatacaagcaagactga 2601 Query: 2669 ggagaaaggctgcactgctacacttaaagccttcattgattacatttctttgagggaaac 2728 |||||||||||| || |||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 2602 ggagaaaggctgtgcttctacacttaaagcctttattgattatatctctttgagagaaac 2661 Query: 2729 agaaaattttagatcccggaaggaggaaaataagaactccatcacattaacaactattca 2788 ||||| || ||||| || |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 2662 tgaaaacttcagatcacgaaaggaggaaaataaaaactctatcacattaacaactatcca 2721 Query: 2789 tcagtcaaaaggtttagagtgggatgttgtgttcatcgtgcaggtaaatgattcagaaat 2848 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 2722 ccagtcaaaaggtttagagtgggatgttgtgtttatcgtgcaggcaaatgattcagaaat 2781 Query: 2849 ccccttgctgcatgagtacaatggcactgtgaaagaagctggatgcacattggaggagga 2908 || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 2782 tcctttgttgcatgagtacaatggcactgtgaaagaagctggaagcacactggaggagga 2841 Query: 2909 gaggaggctattctatgttgcaatgacacgagctcggaagaaattgtacatcttgcatgt 2968 ||| |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 2842 gagaaggctattctatgttgcaatgacacgagctcgaaagaaactgtacatcttacatgt 2901 Query: 2969 cacaattgactctcatcgccagctgctgccaccttcacgtttcctgagagagattccagg 3028 ||| |||||||| ||||||||||||||| ||||||||| ||||| || |||||||| | Sbjct: 2902 cacggttgactctaatcgccagctgctgcaaccttcacgcttcctcagggagattcctgc 2961 Query: 3029 tcaccttctcgacatacagggtgaggg 3055 ||||||||| || ||||||||||||| Sbjct: 2962 tcaccttcttgaggtacagggtgaggg 2988 Score = 517 bits (261), Expect = e-143 Identities = 423/477 (88%) Strand = Plus / Plus Query: 3149 gaatgaaacttcaccttaccctgaaccgatgcagtcatgccttgctaatgatttcttgaa 3208 ||||||||||||||||| ||| ||| | ||| |||| |||||||||||||||||||| Sbjct: 3079 gaatgaaacttcacctttcccagaaatggatcagccatgtcttgctaatgatttcttgaa 3138 Query: 3209 gaggttcgaaattgatgatcgagcagtagtctcacatatatttcatcattgggcgaagaa 3268 |||||| |||||||| ||| ||||| || | ||||||||||||||||| ||||||||||| Sbjct: 3139 gaggtttgaaattgaggatagagcaataatttcacatatatttcatcaatgggcgaagaa 3198 Query: 3269 gcaggcatttcaaattccaaagagactgcttgataagatcaaatttgtgatcgatgaacg 3328 ||||||||||||| |||||| || |||||||||||||| ||||| || |||||||| Sbjct: 3199 acaggcatttcaaaatccaaaaaggctgcttgataagattggttttgttattgatgaacg 3258 Query: 3329 cctgcgtggtaaagggtacaagcgcaaggatgtcttgtgcaagctgaagtcattgttaag 3388 | || |||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 3259 tttacgaggtaaaggatacaagcgcaaggatgtattgtgcaagctgaaatcattcttaag 3318 Query: 3389 cgacgatgaagcgcttggttacgcagaatatgttatcaagtgggaacaaattcctatcga 3448 | ||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||| Sbjct: 3319 tggtgatgaagcgtttggttatgcacaatatgttatcaagtgggaacagattcctatcga 3378 Query: 3449 caagcgaagccatttgatgagagagagacaggaacatttccagaagcagaggatagagaa 3508 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3379 caagcggagccatttgatgagagagagacaggaacatttccaaaagcagaggatagagaa 3438 Query: 3509 ctccatgggttcttcagagcctacacctaagcagatatcctacctccggagcctggggtg 3568 |||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 3439 ctccatgggttcctcagaacctacacctaagcagatatcgtacctccggaacctggggtg 3498 Query: 3569 caccataacacccacgtctcgtctccacgcgtccaatcttattgagaagtataaatc 3625 |||||| |||||||||||||| || |||||||| ||||||| |||||||| ||||| Sbjct: 3499 caccatcacacccacgtctcgcctgcacgcgtcgcatcttatcgagaagtacaaatc 3555 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Plus Query: 329 catggacgaggcgttcttgcttgaggtggacgccatctgcgaggagcactcgcggtccat 388 |||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||| Sbjct: 329 catggacgaggcgttcctgcgggaggtggacgccatttgcgaggagcacgagcggtcctc 388 Query: 389 ggcctggaaggataagg 405 |||| |||||||||||| Sbjct: 389 ggccaggaaggataagg 405 Score = 46.1 bits (23), Expect = 0.97 Identities = 47/55 (85%) Strand = Plus / Plus Query: 177 tgcccgccgccccgccagccgctcgccgatgttacggtcaacgccctgcagcagc 231 ||||||||||| |||| ||||||||||| || || | ||||||||||| ||||| Sbjct: 177 tgcccgccgccgcgccgcccgctcgccgacgtcaccggcaacgccctgcggcagc 231
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 218 bits (110), Expect = 1e-52 Identities = 173/194 (89%) Strand = Plus / Minus Query: 2592 cttcagtttttaatggatgatgtgtctgatttcttgtcaacacacttttctagttcaggg 2651 ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| | Sbjct: 18288263 cttcagtttttaatggatgatgtgtctgacttcttatcaacacatttttctagttcagtg 18288204 Query: 2652 ggtgcaagccagactgaggagaaaggctgcactgctacacttaaagccttcattgattac 2711 | | ||||| ||||||||||||||||||| || |||||||||||||||| |||||||| Sbjct: 18288203 gatacaagcaagactgaggagaaaggctgtgcttctacacttaaagcctttattgattat 18288144 Query: 2712 atttctttgagggaaacagaaaattttagatcccggaaggaggaaaataagaactccatc 2771 || |||||||| ||||| ||||| || ||||| || |||||||||||||| ||||| ||| Sbjct: 18288143 atctctttgagagaaactgaaaacttcagatcacgaaaggaggaaaataaaaactctatc 18288084 Query: 2772 acattaacaactat 2785 |||||||||||||| Sbjct: 18288083 acattaacaactat 18288070 Score = 210 bits (106), Expect = 3e-50 Identities = 145/158 (91%) Strand = Plus / Minus Query: 1123 caccatcaaacatccttgctatgacattcacaactgctgctgcctcagaaatgagggacc 1182 ||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||| | Sbjct: 18295400 caccatcaaacattcttgctatgacattcacaactgctgctgcttctgaaatgcgggatc 18295341 Query: 1183 ggataggggcagtggtcgggaaggcagttgccaaagagatcataataagcacatttcact 1242 | || ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 18295340 gaattgggacagtggtggggaaggcagttgccaaggagattgtaataagcacatttcact 18295281 Query: 1243 ccttctgcttgcagctttgcaggacccatgctgaaaag 1280 | |||||||||||||||||||||||||||||||||||| Sbjct: 18295280 cattctgcttgcagctttgcaggacccatgctgaaaag 18295243 Score = 143 bits (72), Expect = 6e-30 Identities = 96/104 (92%) Strand = Plus / Minus Query: 2290 agattatagatcacgtggaaaagatttcgttggctagaaagtgtagcttcatatcagctg 2349 |||||||| |||| | ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 18290737 agattatacatcatattgaaaagatttcattggctagaaagtgtagcttcatatcggctg 18290678 Query: 2350 ctactgacatcttcagtgcaaaggtctcggggaccttcaaaagg 2393 |||||||||||||||||||||||||||| || |||||||||||| Sbjct: 18290677 ctactgacatcttcagtgcaaaggtctctggtaccttcaaaagg 18290634 Score = 141 bits (71), Expect = 2e-29 Identities = 116/131 (88%) Strand = Plus / Minus Query: 1963 agatcactgttaaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaa 2022 |||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||| | Sbjct: 18292311 agatcattgttaaggagtgccacagtgaagattcacaatgtgcatttgttattgacaaga 18292252 Query: 2023 tcattgaaactacatctagttcagctgaaggtcgcgactttggtaaaattgctgtcctat 2082 | |||||||| ||||||||||||| |||||| | | ||||| |||||||||||||||| Sbjct: 18292251 ttattgaaaccacatctagttcagttgaaggatgtcattttggcaaaattgctgtcctat 18292192 Query: 2083 atcgaagacag 2093 |||| |||||| Sbjct: 18292191 atcgcagacag 18292181 Score = 139 bits (70), Expect = 9e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 1524 gcttcgattcttcggcactacaatgaaatactagtgtcttgtaatgctcttgattatcat 1583 ||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||| Sbjct: 18293137 gcttcaattcttcggcactacaatgaaatattaaggtcttgtaatgctcttgattaccat 18293078 Query: 1584 gattttattaactcatccataactcttctcacgaagtttcctgaag 1629 ||||||||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 18293077 gattttattaattcatcgataacccttctcacaaagtttcctgaag 18293032 Score = 139 bits (70), Expect = 9e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 932 actagaaatggaggaaaatgaagggtgtgccccaaggaagtactatgagtatttgcactc 991 ||||||||| ||||||||||||||||||| |||| ||||||||| || |||||||| || Sbjct: 18296270 actagaaattgaggaaaatgaagggtgtgttccaaagaagtactacgaatatttgcagtc 18296211 Query: 992 cctaaatgacaagcagagggaggcttcatgtagtgatgtagctgttccgttaatgatcgt 1051 ||| ||||||| ||||||||| ||| ||||||||||||| || |||| ||||||| || Sbjct: 18296210 cctgaatgacaggcagagggaagctgcatgtagtgatgtgactattccactaatgatagt 18296151 Query: 1052 tgcaggtccaggaagtggaaag 1073 ||| |||||||||||||||||| Sbjct: 18296150 tgctggtccaggaagtggaaag 18296129 Score = 135 bits (68), Expect = 1e-27 Identities = 158/188 (84%) Strand = Plus / Minus Query: 1280 gctaggccgtacatctgaattcataatatatggccatgggcaacagaggagggccattgt 1339 ||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || | Sbjct: 18294573 gctaggccgcacatctgaattcataatctatggaaatgggcagcagaggagggctgttat 18294514 Query: 1340 tgaggcagaacgcctgttggagcatggcaaaagtgatggtttaggagatgcagttaagca 1399 ||||||||| || || ||||| || ||||| | ||||| ||||||||||| |||| | Sbjct: 18294513 tgaggcagagcgtctattggaaagtgacaaaaataatggtctaggagatgcaaataagaa 18294454 Query: 1400 gtgtgatggagacattaaaaattcctttaaagacaaagctaagaagtggttgaagtttgt 1459 || |||||||| ||||||||||| || || |||||||||||||| ||| ||||||||| Sbjct: 18294453 ttgcgatggagatattaaaaattctttcaaggacaaagctaagaaatggcagaagtttgt 18294394 Query: 1460 tacacagg 1467 |||||||| Sbjct: 18294393 tacacagg 18294386 Score = 125 bits (63), Expect = 1e-24 Identities = 75/79 (94%) Strand = Plus / Minus Query: 1760 tcagtccatcttcagtttcaatggtgccgatgtttctggctttgattcatttcgtagaga 1819 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 18292700 tcagtccatcttcagtttcaatggtgctgatgtctctggctttgattcatttcgtagaga 18292641 Query: 1820 ctttccaaatcataaagag 1838 ||||||||||| |||||| Sbjct: 18292640 ttttccaaatcacaaagag 18292622 Score = 121 bits (61), Expect = 2e-23 Identities = 82/89 (92%) Strand = Plus / Minus Query: 2902 aggaggagaggaggctattctatgttgcaatgacacgagctcggaagaaattgtacatct 2961 |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 18287309 aggaggagagaaggctattctatgttgcaatgacacgagctcgaaagaaactgtacatct 18287250 Query: 2962 tgcatgtcacaattgactctcatcgccag 2990 | |||||||| |||||||| |||||||| Sbjct: 18287249 tacatgtcacggttgactctaatcgccag 18287221 Score = 115 bits (58), Expect = 1e-21 Identities = 82/90 (91%) Strand = Plus / Minus Query: 2090 acagataactggcaaagcattccaagtgtcattccgcaacaggaaaataccctttaatgt 2149 |||||| ||||||||||||||||| | ||||||||||||||| ||||| || |||||| | Sbjct: 18292111 acagatcactggcaaagcattccaggcgtcattccgcaacagaaaaattccttttaatat 18292052 Query: 2150 tcatggtgtggctttctaccggaaaaaggt 2179 ||||||||||||||||||| |||||||||| Sbjct: 18292051 tcatggtgtggctttctacaggaaaaaggt 18292022 Score = 107 bits (54), Expect = 3e-19 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3477 caggaacatttccagaagcagaggatagagaactccatgggttcttcagagcctacacct 3536 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 18285502 caggaacatttccaaaagcagaggatagagaactccatgggttcctcagaacctacacct 18285443 Query: 3537 aagcag 3542 |||||| Sbjct: 18285442 aagcag 18285437 Score = 105 bits (53), Expect = 1e-18 Identities = 59/61 (96%) Strand = Plus / Minus Query: 3420 gttatcaagtgggaacaaattcctatcgacaagcgaagccatttgatgagagagagacag 3479 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 18285682 gttatcaagtgggaacagattcctatcgacaagcggagccatttgatgagagagagacag 18285623 Query: 3480 g 3480 | Sbjct: 18285622 g 18285622 Score = 103 bits (52), Expect = 5e-18 Identities = 85/96 (88%) Strand = Plus / Minus Query: 3210 aggttcgaaattgatgatcgagcagtagtctcacatatatttcatcattgggcgaagaag 3269 ||||| |||||||| ||| ||||| || | ||||||||||||||||| ||||||||||| Sbjct: 18286508 aggtttgaaattgaggatagagcaataatttcacatatatttcatcaatgggcgaagaaa 18286449 Query: 3270 caggcatttcaaattccaaagagactgcttgataag 3305 ||||||||||||| |||||| || |||||||||||| Sbjct: 18286448 caggcatttcaaaatccaaaaaggctgcttgataag 18286413 Score = 103 bits (52), Expect = 5e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 2829 caggtaaatgattcagaaatccccttgctgcatgagtacaatggcactgtgaaagaagct 2888 |||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||| Sbjct: 18287454 caggcaaatgattcagaaattcctttgttgcatgagtacaatggcactgtgaaagaagct 18287395 Query: 2889 ggatgcacattggagg 2904 ||| ||||| |||||| Sbjct: 18287394 ggaagcacactggagg 18287379 Score = 103 bits (52), Expect = 5e-18 Identities = 115/136 (84%) Strand = Plus / Minus Query: 1628 agtatacaaagagtgccaaaccacatgtcaggcaatagtagttgatgagtttcaggatac 1687 ||||||| | ||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 18292949 agtatacgacgagtgccgaaatacatggcaggcaatagtagttgatgagtttcaggatac 18292890 Query: 1688 cagtgctatgcaatattttcttctgaaacttctagcttctcacaatcatataaccattgt 1747 |||||||||||||||| |||| | || ||||| || ||||| | ||||| ||||| Sbjct: 18292889 aagtgctatgcaatattatcttttaaagacactagcatcccacaaccgcataactattgt 18292830 Query: 1748 tggtgatgaagatcag 1763 |||||| ||||||||| Sbjct: 18292829 tggtgacgaagatcag 18292814 Score = 101 bits (51), Expect = 2e-17 Identities = 78/87 (89%) Strand = Plus / Minus Query: 3539 gcagatatcctacctccggagcctggggtgcaccataacacccacgtctcgtctccacgc 3598 ||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| Sbjct: 18285225 gcagatatcgtacctccggaacctggggtgcaccatcacacccacgtctcgcctgcacgc 18285166 Query: 3599 gtccaatcttattgagaagtataaatc 3625 ||| ||||||| |||||||| ||||| Sbjct: 18285165 gtcgcatcttatcgagaagtacaaatc 18285139 Score = 91.7 bits (46), Expect = 2e-14 Identities = 61/66 (92%) Strand = Plus / Minus Query: 1850 caagaactaccgctctacacgggcaattgttgaagcagcaacagcccttattcgcaacaa 1909 ||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 18292499 caagaactatcgctctacacgggcaattgttgaagcagcaacagctttaattcacaacaa 18292440 Query: 1910 cactaa 1915 |||||| Sbjct: 18292439 cactaa 18292434 Score = 81.8 bits (41), Expect = 2e-11 Identities = 44/45 (97%) Strand = Plus / Minus Query: 2790 cagtcaaaaggtttagagtgggatgttgtgttcatcgtgcaggta 2834 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 18287975 cagtcaaaaggtttagagtgggatgttgtgtttatcgtgcaggta 18287931 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Minus Query: 329 catggacgaggcgttcttgcttgaggtggacgccatctgcgaggagcactcgcggtccat 388 |||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||| Sbjct: 18297730 catggacgaggcgttcctgcgggaggtggacgccatttgcgaggagcacgagcggtcctc 18297671 Query: 389 ggcctggaaggataagg 405 |||| |||||||||||| Sbjct: 18297670 ggccaggaaggataagg 18297654 Score = 75.8 bits (38), Expect = 1e-09 Identities = 62/70 (88%) Strand = Plus / Minus Query: 2391 agggcccagattactcaagggcgtaaggttttatcgaccttgtatagcctatcaaaattt 2450 |||||||||||||||||||| | ||||||||||| ||||| |||||||||||||| || Sbjct: 18290493 agggcccagattactcaaggaagaaaggttttatcagccttggatagcctatcaaaactt 18290434 Query: 2451 gttgagaggg 2460 ||||| |||| Sbjct: 18290433 gttgaaaggg 18290424 Score = 63.9 bits (32), Expect = 4e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1485 actcccgaagaatatgaaaagaagggggatttgacaggag 1524 |||||||| || |||||||||||||||||||||||||||| Sbjct: 18293258 actcccgaggagtatgaaaagaagggggatttgacaggag 18293219 Score = 61.9 bits (31), Expect = 2e-05 Identities = 58/67 (86%) Strand = Plus / Minus Query: 3355 aggatgtcttgtgcaagctgaagtcattgttaagcgacgatgaagcgcttggttacgcag 3414 ||||||| |||||||||||||| ||||| ||||| | ||||||||| ||||||| ||| Sbjct: 18285869 aggatgtattgtgcaagctgaaatcattcttaagtggtgatgaagcgtttggttatgcac 18285810 Query: 3415 aatatgt 3421 ||||||| Sbjct: 18285809 aatatgt 18285803 Score = 60.0 bits (30), Expect = 6e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 2546 tgatggtggtaaattgttaaatgaagacaatgacatcagatc 2587 |||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 18289249 tgatgggggtaaattattaaatgaagataatgacatcagatc 18289208 Score = 60.0 bits (30), Expect = 6e-05 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 2176 aggttatcaaagctattatggcaatacttagaaccacattacctggttg---tgacgatg 2232 ||||||||||||| |||||||| ||||||| ||| |||||||| || || ||| |||| Sbjct: 18290938 aggttatcaaagcaattatggccatacttaaaactacattaccaggctgtgatgatgatg 18290879 Query: 2233 gcccatggcgtcaggccttaaagatccttttgcctggtgacaaggaag 2280 |||||||| ||| ||||| ||| | || | |||||||||||||||| Sbjct: 18290878 ccccatggcatcaagccttcaaggccattcttcctggtgacaaggaag 18290831 Score = 58.0 bits (29), Expect = 3e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 3149 gaatgaaacttcaccttaccctgaaccgatgcagtcatgccttgctaatgatttcttgaa 3208 ||||||||||||||||| ||| ||| | ||| |||| |||||||||||||||||||| Sbjct: 18286758 gaatgaaacttcacctttcccagaaatggatcagccatgtcttgctaatgatttcttgaa 18286699 Query: 3209 gaggt 3213 ||||| Sbjct: 18286698 gaggt 18286694 Score = 56.0 bits (28), Expect = 0.001 Identities = 46/52 (88%) Strand = Plus / Minus Query: 2459 ggaacaatcagtttcagctatcatttcctctgcaggaaatatgctacctcag 2510 ||||||||||||||||| ||||||| ||||| ||| |||||||||||||| Sbjct: 18289860 ggaacaatcagtttcagtggtcatttcttctgctggagatatgctacctcag 18289809 Score = 46.1 bits (23), Expect = 0.97 Identities = 47/55 (85%) Strand = Plus / Minus Query: 177 tgcccgccgccccgccagccgctcgccgatgttacggtcaacgccctgcagcagc 231 ||||||||||| |||| ||||||||||| || || | ||||||||||| ||||| Sbjct: 18297882 tgcccgccgccgcgccgcccgctcgccgacgtcaccggcaacgccctgcggcagc 18297828 Score = 44.1 bits (22), Expect = 3.8 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1071 aagacttctacaatggttggtagggttctcacattgctgaaagagg 1116 ||||| || |||||||||||| |||| |||||| |||| ||||||| Sbjct: 18295548 aagacatcaacaatggttggtcgggtgctcacactgctcaaagagg 18295503
>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1218_C12 Length = 105861 Score = 218 bits (110), Expect = 1e-52 Identities = 173/194 (89%) Strand = Plus / Minus Query: 2592 cttcagtttttaatggatgatgtgtctgatttcttgtcaacacacttttctagttcaggg 2651 ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| | Sbjct: 91506 cttcagtttttaatggatgatgtgtctgacttcttatcaacacatttttctagttcagtg 91447 Query: 2652 ggtgcaagccagactgaggagaaaggctgcactgctacacttaaagccttcattgattac 2711 | | ||||| ||||||||||||||||||| || |||||||||||||||| |||||||| Sbjct: 91446 gatacaagcaagactgaggagaaaggctgtgcttctacacttaaagcctttattgattat 91387 Query: 2712 atttctttgagggaaacagaaaattttagatcccggaaggaggaaaataagaactccatc 2771 || |||||||| ||||| ||||| || ||||| || |||||||||||||| ||||| ||| Sbjct: 91386 atctctttgagagaaactgaaaacttcagatcacgaaaggaggaaaataaaaactctatc 91327 Query: 2772 acattaacaactat 2785 |||||||||||||| Sbjct: 91326 acattaacaactat 91313 Score = 210 bits (106), Expect = 3e-50 Identities = 145/158 (91%) Strand = Plus / Minus Query: 1123 caccatcaaacatccttgctatgacattcacaactgctgctgcctcagaaatgagggacc 1182 ||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||| | Sbjct: 98643 caccatcaaacattcttgctatgacattcacaactgctgctgcttctgaaatgcgggatc 98584 Query: 1183 ggataggggcagtggtcgggaaggcagttgccaaagagatcataataagcacatttcact 1242 | || ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 98583 gaattgggacagtggtggggaaggcagttgccaaggagattgtaataagcacatttcact 98524 Query: 1243 ccttctgcttgcagctttgcaggacccatgctgaaaag 1280 | |||||||||||||||||||||||||||||||||||| Sbjct: 98523 cattctgcttgcagctttgcaggacccatgctgaaaag 98486 Score = 143 bits (72), Expect = 6e-30 Identities = 96/104 (92%) Strand = Plus / Minus Query: 2290 agattatagatcacgtggaaaagatttcgttggctagaaagtgtagcttcatatcagctg 2349 |||||||| |||| | ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 93980 agattatacatcatattgaaaagatttcattggctagaaagtgtagcttcatatcggctg 93921 Query: 2350 ctactgacatcttcagtgcaaaggtctcggggaccttcaaaagg 2393 |||||||||||||||||||||||||||| || |||||||||||| Sbjct: 93920 ctactgacatcttcagtgcaaaggtctctggtaccttcaaaagg 93877 Score = 141 bits (71), Expect = 2e-29 Identities = 116/131 (88%) Strand = Plus / Minus Query: 1963 agatcactgttaaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaa 2022 |||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||| | Sbjct: 95554 agatcattgttaaggagtgccacagtgaagattcacaatgtgcatttgttattgacaaga 95495 Query: 2023 tcattgaaactacatctagttcagctgaaggtcgcgactttggtaaaattgctgtcctat 2082 | |||||||| ||||||||||||| |||||| | | ||||| |||||||||||||||| Sbjct: 95494 ttattgaaaccacatctagttcagttgaaggatgtcattttggcaaaattgctgtcctat 95435 Query: 2083 atcgaagacag 2093 |||| |||||| Sbjct: 95434 atcgcagacag 95424 Score = 139 bits (70), Expect = 9e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 1524 gcttcgattcttcggcactacaatgaaatactagtgtcttgtaatgctcttgattatcat 1583 ||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||| Sbjct: 96380 gcttcaattcttcggcactacaatgaaatattaaggtcttgtaatgctcttgattaccat 96321 Query: 1584 gattttattaactcatccataactcttctcacgaagtttcctgaag 1629 ||||||||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 96320 gattttattaattcatcgataacccttctcacaaagtttcctgaag 96275 Score = 139 bits (70), Expect = 9e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 932 actagaaatggaggaaaatgaagggtgtgccccaaggaagtactatgagtatttgcactc 991 ||||||||| ||||||||||||||||||| |||| ||||||||| || |||||||| || Sbjct: 99513 actagaaattgaggaaaatgaagggtgtgttccaaagaagtactacgaatatttgcagtc 99454 Query: 992 cctaaatgacaagcagagggaggcttcatgtagtgatgtagctgttccgttaatgatcgt 1051 ||| ||||||| ||||||||| ||| ||||||||||||| || |||| ||||||| || Sbjct: 99453 cctgaatgacaggcagagggaagctgcatgtagtgatgtgactattccactaatgatagt 99394 Query: 1052 tgcaggtccaggaagtggaaag 1073 ||| |||||||||||||||||| Sbjct: 99393 tgctggtccaggaagtggaaag 99372 Score = 135 bits (68), Expect = 1e-27 Identities = 158/188 (84%) Strand = Plus / Minus Query: 1280 gctaggccgtacatctgaattcataatatatggccatgggcaacagaggagggccattgt 1339 ||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || | Sbjct: 97816 gctaggccgcacatctgaattcataatctatggaaatgggcagcagaggagggctgttat 97757 Query: 1340 tgaggcagaacgcctgttggagcatggcaaaagtgatggtttaggagatgcagttaagca 1399 ||||||||| || || ||||| || ||||| | ||||| ||||||||||| |||| | Sbjct: 97756 tgaggcagagcgtctattggaaagtgacaaaaataatggtctaggagatgcaaataagaa 97697 Query: 1400 gtgtgatggagacattaaaaattcctttaaagacaaagctaagaagtggttgaagtttgt 1459 || |||||||| ||||||||||| || || |||||||||||||| ||| ||||||||| Sbjct: 97696 ttgcgatggagatattaaaaattctttcaaggacaaagctaagaaatggcagaagtttgt 97637 Query: 1460 tacacagg 1467 |||||||| Sbjct: 97636 tacacagg 97629 Score = 125 bits (63), Expect = 1e-24 Identities = 75/79 (94%) Strand = Plus / Minus Query: 1760 tcagtccatcttcagtttcaatggtgccgatgtttctggctttgattcatttcgtagaga 1819 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 95943 tcagtccatcttcagtttcaatggtgctgatgtctctggctttgattcatttcgtagaga 95884 Query: 1820 ctttccaaatcataaagag 1838 ||||||||||| |||||| Sbjct: 95883 ttttccaaatcacaaagag 95865 Score = 121 bits (61), Expect = 2e-23 Identities = 82/89 (92%) Strand = Plus / Minus Query: 2902 aggaggagaggaggctattctatgttgcaatgacacgagctcggaagaaattgtacatct 2961 |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90552 aggaggagagaaggctattctatgttgcaatgacacgagctcgaaagaaactgtacatct 90493 Query: 2962 tgcatgtcacaattgactctcatcgccag 2990 | |||||||| |||||||| |||||||| Sbjct: 90492 tacatgtcacggttgactctaatcgccag 90464 Score = 115 bits (58), Expect = 1e-21 Identities = 82/90 (91%) Strand = Plus / Minus Query: 2090 acagataactggcaaagcattccaagtgtcattccgcaacaggaaaataccctttaatgt 2149 |||||| ||||||||||||||||| | ||||||||||||||| ||||| || |||||| | Sbjct: 95354 acagatcactggcaaagcattccaggcgtcattccgcaacagaaaaattccttttaatat 95295 Query: 2150 tcatggtgtggctttctaccggaaaaaggt 2179 ||||||||||||||||||| |||||||||| Sbjct: 95294 tcatggtgtggctttctacaggaaaaaggt 95265 Score = 107 bits (54), Expect = 3e-19 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3477 caggaacatttccagaagcagaggatagagaactccatgggttcttcagagcctacacct 3536 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 88745 caggaacatttccaaaagcagaggatagagaactccatgggttcctcagaacctacacct 88686 Query: 3537 aagcag 3542 |||||| Sbjct: 88685 aagcag 88680 Score = 105 bits (53), Expect = 1e-18 Identities = 59/61 (96%) Strand = Plus / Minus Query: 3420 gttatcaagtgggaacaaattcctatcgacaagcgaagccatttgatgagagagagacag 3479 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88925 gttatcaagtgggaacagattcctatcgacaagcggagccatttgatgagagagagacag 88866 Query: 3480 g 3480 | Sbjct: 88865 g 88865 Score = 103 bits (52), Expect = 5e-18 Identities = 85/96 (88%) Strand = Plus / Minus Query: 3210 aggttcgaaattgatgatcgagcagtagtctcacatatatttcatcattgggcgaagaag 3269 ||||| |||||||| ||| ||||| || | ||||||||||||||||| ||||||||||| Sbjct: 89751 aggtttgaaattgaggatagagcaataatttcacatatatttcatcaatgggcgaagaaa 89692 Query: 3270 caggcatttcaaattccaaagagactgcttgataag 3305 ||||||||||||| |||||| || |||||||||||| Sbjct: 89691 caggcatttcaaaatccaaaaaggctgcttgataag 89656 Score = 103 bits (52), Expect = 5e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 2829 caggtaaatgattcagaaatccccttgctgcatgagtacaatggcactgtgaaagaagct 2888 |||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||| Sbjct: 90697 caggcaaatgattcagaaattcctttgttgcatgagtacaatggcactgtgaaagaagct 90638 Query: 2889 ggatgcacattggagg 2904 ||| ||||| |||||| Sbjct: 90637 ggaagcacactggagg 90622 Score = 103 bits (52), Expect = 5e-18 Identities = 115/136 (84%) Strand = Plus / Minus Query: 1628 agtatacaaagagtgccaaaccacatgtcaggcaatagtagttgatgagtttcaggatac 1687 ||||||| | ||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 96192 agtatacgacgagtgccgaaatacatggcaggcaatagtagttgatgagtttcaggatac 96133 Query: 1688 cagtgctatgcaatattttcttctgaaacttctagcttctcacaatcatataaccattgt 1747 |||||||||||||||| |||| | || ||||| || ||||| | ||||| ||||| Sbjct: 96132 aagtgctatgcaatattatcttttaaagacactagcatcccacaaccgcataactattgt 96073 Query: 1748 tggtgatgaagatcag 1763 |||||| ||||||||| Sbjct: 96072 tggtgacgaagatcag 96057 Score = 101 bits (51), Expect = 2e-17 Identities = 78/87 (89%) Strand = Plus / Minus Query: 3539 gcagatatcctacctccggagcctggggtgcaccataacacccacgtctcgtctccacgc 3598 ||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| Sbjct: 88468 gcagatatcgtacctccggaacctggggtgcaccatcacacccacgtctcgcctgcacgc 88409 Query: 3599 gtccaatcttattgagaagtataaatc 3625 ||| ||||||| |||||||| ||||| Sbjct: 88408 gtcgcatcttatcgagaagtacaaatc 88382 Score = 91.7 bits (46), Expect = 2e-14 Identities = 61/66 (92%) Strand = Plus / Minus Query: 1850 caagaactaccgctctacacgggcaattgttgaagcagcaacagcccttattcgcaacaa 1909 ||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 95742 caagaactatcgctctacacgggcaattgttgaagcagcaacagctttaattcacaacaa 95683 Query: 1910 cactaa 1915 |||||| Sbjct: 95682 cactaa 95677 Score = 81.8 bits (41), Expect = 2e-11 Identities = 44/45 (97%) Strand = Plus / Minus Query: 2790 cagtcaaaaggtttagagtgggatgttgtgttcatcgtgcaggta 2834 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 91218 cagtcaaaaggtttagagtgggatgttgtgtttatcgtgcaggta 91174 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Minus Query: 329 catggacgaggcgttcttgcttgaggtggacgccatctgcgaggagcactcgcggtccat 388 |||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||| Sbjct: 100973 catggacgaggcgttcctgcgggaggtggacgccatttgcgaggagcacgagcggtcctc 100914 Query: 389 ggcctggaaggataagg 405 |||| |||||||||||| Sbjct: 100913 ggccaggaaggataagg 100897 Score = 75.8 bits (38), Expect = 1e-09 Identities = 62/70 (88%) Strand = Plus / Minus Query: 2391 agggcccagattactcaagggcgtaaggttttatcgaccttgtatagcctatcaaaattt 2450 |||||||||||||||||||| | ||||||||||| ||||| |||||||||||||| || Sbjct: 93736 agggcccagattactcaaggaagaaaggttttatcagccttggatagcctatcaaaactt 93677 Query: 2451 gttgagaggg 2460 ||||| |||| Sbjct: 93676 gttgaaaggg 93667 Score = 63.9 bits (32), Expect = 4e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1485 actcccgaagaatatgaaaagaagggggatttgacaggag 1524 |||||||| || |||||||||||||||||||||||||||| Sbjct: 96501 actcccgaggagtatgaaaagaagggggatttgacaggag 96462 Score = 61.9 bits (31), Expect = 2e-05 Identities = 58/67 (86%) Strand = Plus / Minus Query: 3355 aggatgtcttgtgcaagctgaagtcattgttaagcgacgatgaagcgcttggttacgcag 3414 ||||||| |||||||||||||| ||||| ||||| | ||||||||| ||||||| ||| Sbjct: 89112 aggatgtattgtgcaagctgaaatcattcttaagtggtgatgaagcgtttggttatgcac 89053 Query: 3415 aatatgt 3421 ||||||| Sbjct: 89052 aatatgt 89046 Score = 60.0 bits (30), Expect = 6e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 2546 tgatggtggtaaattgttaaatgaagacaatgacatcagatc 2587 |||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 92492 tgatgggggtaaattattaaatgaagataatgacatcagatc 92451 Score = 60.0 bits (30), Expect = 6e-05 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 2176 aggttatcaaagctattatggcaatacttagaaccacattacctggttg---tgacgatg 2232 ||||||||||||| |||||||| ||||||| ||| |||||||| || || ||| |||| Sbjct: 94181 aggttatcaaagcaattatggccatacttaaaactacattaccaggctgtgatgatgatg 94122 Query: 2233 gcccatggcgtcaggccttaaagatccttttgcctggtgacaaggaag 2280 |||||||| ||| ||||| ||| | || | |||||||||||||||| Sbjct: 94121 ccccatggcatcaagccttcaaggccattcttcctggtgacaaggaag 94074 Score = 58.0 bits (29), Expect = 3e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 3149 gaatgaaacttcaccttaccctgaaccgatgcagtcatgccttgctaatgatttcttgaa 3208 ||||||||||||||||| ||| ||| | ||| |||| |||||||||||||||||||| Sbjct: 90001 gaatgaaacttcacctttcccagaaatggatcagccatgtcttgctaatgatttcttgaa 89942 Query: 3209 gaggt 3213 ||||| Sbjct: 89941 gaggt 89937 Score = 56.0 bits (28), Expect = 0.001 Identities = 46/52 (88%) Strand = Plus / Minus Query: 2459 ggaacaatcagtttcagctatcatttcctctgcaggaaatatgctacctcag 2510 ||||||||||||||||| ||||||| ||||| ||| |||||||||||||| Sbjct: 93103 ggaacaatcagtttcagtggtcatttcttctgctggagatatgctacctcag 93052 Score = 46.1 bits (23), Expect = 0.97 Identities = 47/55 (85%) Strand = Plus / Minus Query: 177 tgcccgccgccccgccagccgctcgccgatgttacggtcaacgccctgcagcagc 231 ||||||||||| |||| ||||||||||| || || | ||||||||||| ||||| Sbjct: 101125 tgcccgccgccgcgccgcccgctcgccgacgtcaccggcaacgccctgcggcagc 101071 Score = 44.1 bits (22), Expect = 3.8 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1071 aagacttctacaatggttggtagggttctcacattgctgaaagagg 1116 ||||| || |||||||||||| |||| |||||| |||| ||||||| Sbjct: 98791 aagacatcaacaatggttggtcgggtgctcacactgctcaaagagg 98746
>dbj|AP004266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F10 Length = 153929 Score = 218 bits (110), Expect = 1e-52 Identities = 173/194 (89%) Strand = Plus / Minus Query: 2592 cttcagtttttaatggatgatgtgtctgatttcttgtcaacacacttttctagttcaggg 2651 ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| | Sbjct: 17758 cttcagtttttaatggatgatgtgtctgacttcttatcaacacatttttctagttcagtg 17699 Query: 2652 ggtgcaagccagactgaggagaaaggctgcactgctacacttaaagccttcattgattac 2711 | | ||||| ||||||||||||||||||| || |||||||||||||||| |||||||| Sbjct: 17698 gatacaagcaagactgaggagaaaggctgtgcttctacacttaaagcctttattgattat 17639 Query: 2712 atttctttgagggaaacagaaaattttagatcccggaaggaggaaaataagaactccatc 2771 || |||||||| ||||| ||||| || ||||| || |||||||||||||| ||||| ||| Sbjct: 17638 atctctttgagagaaactgaaaacttcagatcacgaaaggaggaaaataaaaactctatc 17579 Query: 2772 acattaacaactat 2785 |||||||||||||| Sbjct: 17578 acattaacaactat 17565 Score = 210 bits (106), Expect = 3e-50 Identities = 145/158 (91%) Strand = Plus / Minus Query: 1123 caccatcaaacatccttgctatgacattcacaactgctgctgcctcagaaatgagggacc 1182 ||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||| | Sbjct: 24895 caccatcaaacattcttgctatgacattcacaactgctgctgcttctgaaatgcgggatc 24836 Query: 1183 ggataggggcagtggtcgggaaggcagttgccaaagagatcataataagcacatttcact 1242 | || ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 24835 gaattgggacagtggtggggaaggcagttgccaaggagattgtaataagcacatttcact 24776 Query: 1243 ccttctgcttgcagctttgcaggacccatgctgaaaag 1280 | |||||||||||||||||||||||||||||||||||| Sbjct: 24775 cattctgcttgcagctttgcaggacccatgctgaaaag 24738 Score = 143 bits (72), Expect = 6e-30 Identities = 96/104 (92%) Strand = Plus / Minus Query: 2290 agattatagatcacgtggaaaagatttcgttggctagaaagtgtagcttcatatcagctg 2349 |||||||| |||| | ||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 20232 agattatacatcatattgaaaagatttcattggctagaaagtgtagcttcatatcggctg 20173 Query: 2350 ctactgacatcttcagtgcaaaggtctcggggaccttcaaaagg 2393 |||||||||||||||||||||||||||| || |||||||||||| Sbjct: 20172 ctactgacatcttcagtgcaaaggtctctggtaccttcaaaagg 20129 Score = 141 bits (71), Expect = 2e-29 Identities = 116/131 (88%) Strand = Plus / Minus Query: 1963 agatcactgttaaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaa 2022 |||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||| | Sbjct: 21806 agatcattgttaaggagtgccacagtgaagattcacaatgtgcatttgttattgacaaga 21747 Query: 2023 tcattgaaactacatctagttcagctgaaggtcgcgactttggtaaaattgctgtcctat 2082 | |||||||| ||||||||||||| |||||| | | ||||| |||||||||||||||| Sbjct: 21746 ttattgaaaccacatctagttcagttgaaggatgtcattttggcaaaattgctgtcctat 21687 Query: 2083 atcgaagacag 2093 |||| |||||| Sbjct: 21686 atcgcagacag 21676 Score = 139 bits (70), Expect = 9e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 1524 gcttcgattcttcggcactacaatgaaatactagtgtcttgtaatgctcttgattatcat 1583 ||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||| Sbjct: 22632 gcttcaattcttcggcactacaatgaaatattaaggtcttgtaatgctcttgattaccat 22573 Query: 1584 gattttattaactcatccataactcttctcacgaagtttcctgaag 1629 ||||||||||| ||||| ||||| |||||||| ||||||||||||| Sbjct: 22572 gattttattaattcatcgataacccttctcacaaagtttcctgaag 22527 Score = 139 bits (70), Expect = 9e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 932 actagaaatggaggaaaatgaagggtgtgccccaaggaagtactatgagtatttgcactc 991 ||||||||| ||||||||||||||||||| |||| ||||||||| || |||||||| || Sbjct: 25765 actagaaattgaggaaaatgaagggtgtgttccaaagaagtactacgaatatttgcagtc 25706 Query: 992 cctaaatgacaagcagagggaggcttcatgtagtgatgtagctgttccgttaatgatcgt 1051 ||| ||||||| ||||||||| ||| ||||||||||||| || |||| ||||||| || Sbjct: 25705 cctgaatgacaggcagagggaagctgcatgtagtgatgtgactattccactaatgatagt 25646 Query: 1052 tgcaggtccaggaagtggaaag 1073 ||| |||||||||||||||||| Sbjct: 25645 tgctggtccaggaagtggaaag 25624 Score = 135 bits (68), Expect = 1e-27 Identities = 158/188 (84%) Strand = Plus / Minus Query: 1280 gctaggccgtacatctgaattcataatatatggccatgggcaacagaggagggccattgt 1339 ||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || | Sbjct: 24068 gctaggccgcacatctgaattcataatctatggaaatgggcagcagaggagggctgttat 24009 Query: 1340 tgaggcagaacgcctgttggagcatggcaaaagtgatggtttaggagatgcagttaagca 1399 ||||||||| || || ||||| || ||||| | ||||| ||||||||||| |||| | Sbjct: 24008 tgaggcagagcgtctattggaaagtgacaaaaataatggtctaggagatgcaaataagaa 23949 Query: 1400 gtgtgatggagacattaaaaattcctttaaagacaaagctaagaagtggttgaagtttgt 1459 || |||||||| ||||||||||| || || |||||||||||||| ||| ||||||||| Sbjct: 23948 ttgcgatggagatattaaaaattctttcaaggacaaagctaagaaatggcagaagtttgt 23889 Query: 1460 tacacagg 1467 |||||||| Sbjct: 23888 tacacagg 23881 Score = 125 bits (63), Expect = 1e-24 Identities = 75/79 (94%) Strand = Plus / Minus Query: 1760 tcagtccatcttcagtttcaatggtgccgatgtttctggctttgattcatttcgtagaga 1819 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 22195 tcagtccatcttcagtttcaatggtgctgatgtctctggctttgattcatttcgtagaga 22136 Query: 1820 ctttccaaatcataaagag 1838 ||||||||||| |||||| Sbjct: 22135 ttttccaaatcacaaagag 22117 Score = 121 bits (61), Expect = 2e-23 Identities = 82/89 (92%) Strand = Plus / Minus Query: 2902 aggaggagaggaggctattctatgttgcaatgacacgagctcggaagaaattgtacatct 2961 |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 16804 aggaggagagaaggctattctatgttgcaatgacacgagctcgaaagaaactgtacatct 16745 Query: 2962 tgcatgtcacaattgactctcatcgccag 2990 | |||||||| |||||||| |||||||| Sbjct: 16744 tacatgtcacggttgactctaatcgccag 16716 Score = 115 bits (58), Expect = 1e-21 Identities = 82/90 (91%) Strand = Plus / Minus Query: 2090 acagataactggcaaagcattccaagtgtcattccgcaacaggaaaataccctttaatgt 2149 |||||| ||||||||||||||||| | ||||||||||||||| ||||| || |||||| | Sbjct: 21606 acagatcactggcaaagcattccaggcgtcattccgcaacagaaaaattccttttaatat 21547 Query: 2150 tcatggtgtggctttctaccggaaaaaggt 2179 ||||||||||||||||||| |||||||||| Sbjct: 21546 tcatggtgtggctttctacaggaaaaaggt 21517 Score = 107 bits (54), Expect = 3e-19 Identities = 63/66 (95%) Strand = Plus / Minus Query: 3477 caggaacatttccagaagcagaggatagagaactccatgggttcttcagagcctacacct 3536 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 14997 caggaacatttccaaaagcagaggatagagaactccatgggttcctcagaacctacacct 14938 Query: 3537 aagcag 3542 |||||| Sbjct: 14937 aagcag 14932 Score = 105 bits (53), Expect = 1e-18 Identities = 59/61 (96%) Strand = Plus / Minus Query: 3420 gttatcaagtgggaacaaattcctatcgacaagcgaagccatttgatgagagagagacag 3479 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 15177 gttatcaagtgggaacagattcctatcgacaagcggagccatttgatgagagagagacag 15118 Query: 3480 g 3480 | Sbjct: 15117 g 15117 Score = 103 bits (52), Expect = 5e-18 Identities = 85/96 (88%) Strand = Plus / Minus Query: 3210 aggttcgaaattgatgatcgagcagtagtctcacatatatttcatcattgggcgaagaag 3269 ||||| |||||||| ||| ||||| || | ||||||||||||||||| ||||||||||| Sbjct: 16003 aggtttgaaattgaggatagagcaataatttcacatatatttcatcaatgggcgaagaaa 15944 Query: 3270 caggcatttcaaattccaaagagactgcttgataag 3305 ||||||||||||| |||||| || |||||||||||| Sbjct: 15943 caggcatttcaaaatccaaaaaggctgcttgataag 15908 Score = 103 bits (52), Expect = 5e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 2829 caggtaaatgattcagaaatccccttgctgcatgagtacaatggcactgtgaaagaagct 2888 |||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||| Sbjct: 16949 caggcaaatgattcagaaattcctttgttgcatgagtacaatggcactgtgaaagaagct 16890 Query: 2889 ggatgcacattggagg 2904 ||| ||||| |||||| Sbjct: 16889 ggaagcacactggagg 16874 Score = 103 bits (52), Expect = 5e-18 Identities = 115/136 (84%) Strand = Plus / Minus Query: 1628 agtatacaaagagtgccaaaccacatgtcaggcaatagtagttgatgagtttcaggatac 1687 ||||||| | ||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 22444 agtatacgacgagtgccgaaatacatggcaggcaatagtagttgatgagtttcaggatac 22385 Query: 1688 cagtgctatgcaatattttcttctgaaacttctagcttctcacaatcatataaccattgt 1747 |||||||||||||||| |||| | || ||||| || ||||| | ||||| ||||| Sbjct: 22384 aagtgctatgcaatattatcttttaaagacactagcatcccacaaccgcataactattgt 22325 Query: 1748 tggtgatgaagatcag 1763 |||||| ||||||||| Sbjct: 22324 tggtgacgaagatcag 22309 Score = 101 bits (51), Expect = 2e-17 Identities = 78/87 (89%) Strand = Plus / Minus Query: 3539 gcagatatcctacctccggagcctggggtgcaccataacacccacgtctcgtctccacgc 3598 ||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| Sbjct: 14720 gcagatatcgtacctccggaacctggggtgcaccatcacacccacgtctcgcctgcacgc 14661 Query: 3599 gtccaatcttattgagaagtataaatc 3625 ||| ||||||| |||||||| ||||| Sbjct: 14660 gtcgcatcttatcgagaagtacaaatc 14634 Score = 91.7 bits (46), Expect = 2e-14 Identities = 61/66 (92%) Strand = Plus / Minus Query: 1850 caagaactaccgctctacacgggcaattgttgaagcagcaacagcccttattcgcaacaa 1909 ||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 21994 caagaactatcgctctacacgggcaattgttgaagcagcaacagctttaattcacaacaa 21935 Query: 1910 cactaa 1915 |||||| Sbjct: 21934 cactaa 21929 Score = 81.8 bits (41), Expect = 2e-11 Identities = 44/45 (97%) Strand = Plus / Minus Query: 2790 cagtcaaaaggtttagagtgggatgttgtgttcatcgtgcaggta 2834 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 17470 cagtcaaaaggtttagagtgggatgttgtgtttatcgtgcaggta 17426 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Minus Query: 329 catggacgaggcgttcttgcttgaggtggacgccatctgcgaggagcactcgcggtccat 388 |||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||| Sbjct: 27225 catggacgaggcgttcctgcgggaggtggacgccatttgcgaggagcacgagcggtcctc 27166 Query: 389 ggcctggaaggataagg 405 |||| |||||||||||| Sbjct: 27165 ggccaggaaggataagg 27149 Score = 75.8 bits (38), Expect = 1e-09 Identities = 62/70 (88%) Strand = Plus / Minus Query: 2391 agggcccagattactcaagggcgtaaggttttatcgaccttgtatagcctatcaaaattt 2450 |||||||||||||||||||| | ||||||||||| ||||| |||||||||||||| || Sbjct: 19988 agggcccagattactcaaggaagaaaggttttatcagccttggatagcctatcaaaactt 19929 Query: 2451 gttgagaggg 2460 ||||| |||| Sbjct: 19928 gttgaaaggg 19919 Score = 63.9 bits (32), Expect = 4e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1485 actcccgaagaatatgaaaagaagggggatttgacaggag 1524 |||||||| || |||||||||||||||||||||||||||| Sbjct: 22753 actcccgaggagtatgaaaagaagggggatttgacaggag 22714 Score = 61.9 bits (31), Expect = 2e-05 Identities = 58/67 (86%) Strand = Plus / Minus Query: 3355 aggatgtcttgtgcaagctgaagtcattgttaagcgacgatgaagcgcttggttacgcag 3414 ||||||| |||||||||||||| ||||| ||||| | ||||||||| ||||||| ||| Sbjct: 15364 aggatgtattgtgcaagctgaaatcattcttaagtggtgatgaagcgtttggttatgcac 15305 Query: 3415 aatatgt 3421 ||||||| Sbjct: 15304 aatatgt 15298 Score = 60.0 bits (30), Expect = 6e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 2546 tgatggtggtaaattgttaaatgaagacaatgacatcagatc 2587 |||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 18744 tgatgggggtaaattattaaatgaagataatgacatcagatc 18703 Score = 60.0 bits (30), Expect = 6e-05 Identities = 89/108 (82%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 2176 aggttatcaaagctattatggcaatacttagaaccacattacctggttg---tgacgatg 2232 ||||||||||||| |||||||| ||||||| ||| |||||||| || || ||| |||| Sbjct: 20433 aggttatcaaagcaattatggccatacttaaaactacattaccaggctgtgatgatgatg 20374 Query: 2233 gcccatggcgtcaggccttaaagatccttttgcctggtgacaaggaag 2280 |||||||| ||| ||||| ||| | || | |||||||||||||||| Sbjct: 20373 ccccatggcatcaagccttcaaggccattcttcctggtgacaaggaag 20326 Score = 58.0 bits (29), Expect = 3e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 3149 gaatgaaacttcaccttaccctgaaccgatgcagtcatgccttgctaatgatttcttgaa 3208 ||||||||||||||||| ||| ||| | ||| |||| |||||||||||||||||||| Sbjct: 16253 gaatgaaacttcacctttcccagaaatggatcagccatgtcttgctaatgatttcttgaa 16194 Query: 3209 gaggt 3213 ||||| Sbjct: 16193 gaggt 16189 Score = 56.0 bits (28), Expect = 0.001 Identities = 46/52 (88%) Strand = Plus / Minus Query: 2459 ggaacaatcagtttcagctatcatttcctctgcaggaaatatgctacctcag 2510 ||||||||||||||||| ||||||| ||||| ||| |||||||||||||| Sbjct: 19355 ggaacaatcagtttcagtggtcatttcttctgctggagatatgctacctcag 19304 Score = 46.1 bits (23), Expect = 0.97 Identities = 47/55 (85%) Strand = Plus / Minus Query: 177 tgcccgccgccccgccagccgctcgccgatgttacggtcaacgccctgcagcagc 231 ||||||||||| |||| ||||||||||| || || | ||||||||||| ||||| Sbjct: 27377 tgcccgccgccgcgccgcccgctcgccgacgtcaccggcaacgccctgcggcagc 27323 Score = 44.1 bits (22), Expect = 3.8 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1071 aagacttctacaatggttggtagggttctcacattgctgaaagagg 1116 ||||| || |||||||||||| |||| |||||| |||| ||||||| Sbjct: 25043 aagacatcaacaatggttggtcgggtgctcacactgctcaaagagg 24998
>ref|NM_118644.3| Arabidopsis thaliana ATP binding / ATP-dependent DNA helicase/ DNA binding (AT4G25120) mRNA, complete cds Length = 3561 Score = 67.9 bits (34), Expect = 3e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 2119 cattccgcaacaggaaaataccctttaatgttcatggtgtggctttctaccggaaaaagg 2178 |||||||| | || |||||||| ||||| ||||||||||| ||||||||| ||||||||| Sbjct: 1799 cattccgccagagaaaaataccatttaacgttcatggtgttgctttctacaggaaaaagg 1858 Query: 2179 tt 2180 || Sbjct: 1859 tt 1860 Score = 65.9 bits (33), Expect = 1e-06 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1725 tctcacaatcatataaccattgttggtgatgaagatcagtccatcttcagttt 1777 ||||| ||||| ||||| |||||||||||||| ||||||||||||||| |||| Sbjct: 1402 tctcataatcacataactattgttggtgatgatgatcagtccatcttcggttt 1454 Score = 56.0 bits (28), Expect = 0.001 Identities = 73/88 (82%) Strand = Plus / Plus Query: 2527 aacgtgcagttattgataatgatggtggtaaattgttaaatgaagacaatgacatcagat 2586 |||| |||||| | ||||||||||| || ||| || | ||||||||||| || | |||| Sbjct: 2207 aacgagcagttgtggataatgatggaggaaaactgcttaatgaagacaacgatcttagat 2266 Query: 2587 ctgtacttcagtttttaatggatgatgt 2614 ||||||| |||| |||||||||||||| Sbjct: 2267 ctgtactccagtacttaatggatgatgt 2294 Score = 44.1 bits (22), Expect = 3.8 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1974 aaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaatcattgaaa 2031 ||||| ||||||| ||| || |||| ||||| | ||||||||||||||| ||||||| Sbjct: 1651 aaggaatgccataatgaggaagcacagtgtgcatatgtcattgacaaaataattgaaa 1708
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 65.9 bits (33), Expect = 1e-06 Identities = 54/61 (88%) Strand = Plus / Plus Query: 2119 cattccgcaacaggaaaataccctttaatgttcatggtgtggctttctaccggaaaaagg 2178 |||||||| | || |||||||| ||||| ||||||||||| ||||||||| ||||||||| Sbjct: 168847 cattccgccagagaaaaataccatttaacgttcatggtgttgctttctacaggaaaaagg 168906 Query: 2179 t 2179 | Sbjct: 168907 t 168907 Score = 46.1 bits (23), Expect = 0.97 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1725 tctcacaatcatataaccattgttggtgatgaagatcag 1763 ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 168075 tctcataatcacataactattgttggtgatgatgatcag 168113 Score = 44.1 bits (22), Expect = 3.8 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1974 aaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaatcattgaaa 2031 ||||| ||||||| ||| || |||| ||||| | ||||||||||||||| ||||||| Sbjct: 168599 aaggaatgccataatgaggaagcacagtgtgcatatgtcattgacaaaataattgaaa 168656
>emb|AL035523.1|ATF13M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F13M23 (ESSAII project) Length = 99688 Score = 65.9 bits (33), Expect = 1e-06 Identities = 54/61 (88%) Strand = Plus / Plus Query: 2119 cattccgcaacaggaaaataccctttaatgttcatggtgtggctttctaccggaaaaagg 2178 |||||||| | || |||||||| ||||| ||||||||||| ||||||||| ||||||||| Sbjct: 87099 cattccgccagagaaaaataccatttaacgttcatggtgttgctttctacaggaaaaagg 87158 Query: 2179 t 2179 | Sbjct: 87159 t 87159 Score = 46.1 bits (23), Expect = 0.97 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1725 tctcacaatcatataaccattgttggtgatgaagatcag 1763 ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 86327 tctcataatcacataactattgttggtgatgatgatcag 86365 Score = 44.1 bits (22), Expect = 3.8 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1974 aaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaatcattgaaa 2031 ||||| ||||||| ||| || |||| ||||| | ||||||||||||||| ||||||| Sbjct: 86851 aaggaatgccataatgaggaagcacagtgtgcatatgtcattgacaaaataattgaaa 86908
>emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome 4, BAC clone F24A6 (ESSAII project) Length = 92073 Score = 65.9 bits (33), Expect = 1e-06 Identities = 54/61 (88%) Strand = Plus / Plus Query: 2119 cattccgcaacaggaaaataccctttaatgttcatggtgtggctttctaccggaaaaagg 2178 |||||||| | || |||||||| ||||| ||||||||||| ||||||||| ||||||||| Sbjct: 26966 cattccgccagagaaaaataccatttaacgttcatggtgttgctttctacaggaaaaagg 27025 Query: 2179 t 2179 | Sbjct: 27026 t 27026 Score = 46.1 bits (23), Expect = 0.97 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1725 tctcacaatcatataaccattgttggtgatgaagatcag 1763 ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 26194 tctcataatcacataactattgttggtgatgatgatcag 26232 Score = 44.1 bits (22), Expect = 3.8 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1974 aaggagtgccatagtgaagattcacaatgtgcgtttgtcattgacaaaatcattgaaa 2031 ||||| ||||||| ||| || |||| ||||| | ||||||||||||||| ||||||| Sbjct: 26718 aaggaatgccataatgaggaagcacagtgtgcatatgtcattgacaaaataattgaaa 26775
>gb|AC134548.5| Mus musculus BAC clone RP24-258K6 from chromosome 15, complete sequence Length = 177331 Score = 50.1 bits (25), Expect = 0.062 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1262 caggacccatgctgaaaagctaggc 1286 ||||||||||||||||||||||||| Sbjct: 53587 caggacccatgctgaaaagctaggc 53611
>gb|M13366.1|MUSGPDX Mouse glycerophosphate dehydrogenase gene, complete cds Length = 8342 Score = 50.1 bits (25), Expect = 0.062 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1262 caggacccatgctgaaaagctaggc 1286 ||||||||||||||||||||||||| Sbjct: 4227 caggacccatgctgaaaagctaggc 4251
>gb|M25558.1|MUSGPD Mouse glycerol-3-phosphate dehydrogenase gene, complete cds Length = 10793 Score = 50.1 bits (25), Expect = 0.062 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1262 caggacccatgctgaaaagctaggc 1286 ||||||||||||||||||||||||| Sbjct: 7135 caggacccatgctgaaaagctaggc 7159
>emb|CR376804.6| Zebrafish DNA sequence from clone DKEY-42P14 in linkage group 25, complete sequence Length = 117107 Score = 48.1 bits (24), Expect = 0.25 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2661 cagactgaggagaaaggctgcactgcta 2688 ||||||||||||| |||||||||||||| Sbjct: 36919 cagactgaggagacaggctgcactgcta 36892
>ref|XM_001027324.1| Tetrahymena thermophila SB210 Kinesin motor domain containing protein (TTHERM_00681890) mRNA, complete cds Length = 2505 Score = 46.1 bits (23), Expect = 0.97 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1060 caggaagtggaaagacttctacaatgg 1086 |||||||||||||||||| |||||||| Sbjct: 1784 caggaagtggaaagacttatacaatgg 1810
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 46.1 bits (23), Expect = 0.97 Identities = 35/39 (89%) Strand = Plus / Minus Query: 2904 gaggagaggaggctattctatgttgcaatgacacgagct 2942 |||||| |||| |||||||||||||||| ||||||||| Sbjct: 595657 gaggagcggagattattctatgttgcaataacacgagct 595619
>gb|CP000395.1| Borrelia afzelii PKo, complete genome Length = 905394 Score = 44.1 bits (22), Expect = 3.8 Identities = 37/42 (88%) Strand = Plus / Minus Query: 2901 gaggaggagaggaggctattctatgttgcaatgacacgagct 2942 ||||||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 350524 gaggaggagagaaggcttttttatgttgcaattacaagagct 350483
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 ccatgcccgccgccccgccagc 195 |||||||||||||||||||||| Sbjct: 321389 ccatgcccgccgccccgccagc 321368
>gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome 13, complete sequence Length = 191185 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3486 ttccagaagcagaggatagaga 3507 |||||||||||||||||||||| Sbjct: 104266 ttccagaagcagaggatagaga 104287
>dbj|AK147790.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270039P20 product:regulatory factor X, 1 (influences HLA class II expression), full insert sequence Length = 3681 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2985 cgccagctgctgccaccttcac 3006 |||||||||||||||||||||| Sbjct: 2438 cgccagctgctgccaccttcac 2417
>ref|NM_009055.2| Mus musculus regulatory factor X, 1 (influences HLA class II expression) (Rfx1), mRNA dbj|AK083571.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030046L06 product:regulatory factor (trans-acting) 1, full insert sequence Length = 4153 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2985 cgccagctgctgccaccttcac 3006 |||||||||||||||||||||| Sbjct: 2404 cgccagctgctgccaccttcac 2383
>dbj|AK037226.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030011J15 product:regulatory factor (trans-acting) 1, full insert sequence Length = 3109 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2985 cgccagctgctgccaccttcac 3006 |||||||||||||||||||||| Sbjct: 1376 cgccagctgctgccaccttcac 1355
>emb|AL513409.1|NCB11O9 Neurospora crassa DNA linkage group II BAC clone B11O9 Length = 71085 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 gaggacgacgacatggacgagg 339 |||||||||||||||||||||| Sbjct: 37793 gaggacgacgacatggacgagg 37814
>emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chromosome 1 Contains part of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 152113 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 931 gactagaaatggaggaaaatga 952 |||||||||||||||||||||| Sbjct: 115037 gactagaaatggaggaaaatga 115058
>emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chromosome Xp11.1-11.22 Contains the NUDT11 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 11, two novel genes, the NUDT10 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 10 and three CpG islands, complete sequence Length = 184873 Score = 44.1 bits (22), Expect = 3.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 658 ttaagttggaggacactttctgggaa 683 |||||||||||| ||||||||||||| Sbjct: 138641 ttaagttggaggtcactttctgggaa 138616
>emb|X76088.1|MMRFX1 M.musculus (BALB/c) MRFX1 mRNA Length = 3125 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2985 cgccagctgctgccaccttcac 3006 |||||||||||||||||||||| Sbjct: 2340 cgccagctgctgccaccttcac 2319
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 gccccgccagccgctcgccgat 206 |||||||||||||||||||||| Sbjct: 9059 gccccgccagccgctcgccgat 9038
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 gccccgccagccgctcgccgat 206 |||||||||||||||||||||| Sbjct: 277409 gccccgccagccgctcgccgat 277388
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 gccccgccagccgctcgccgat 206 |||||||||||||||||||||| Sbjct: 130230 gccccgccagccgctcgccgat 130209
>ref|XM_958498.1| Neurospora crassa OR74A hypothetical protein ( (AB002530) mus-23 [Neurospora crassa OR74A] ) (NCU08730.1) partial mRNA Length = 1578 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 gaggacgacgacatggacgagg 339 |||||||||||||||||||||| Sbjct: 1117 gaggacgacgacatggacgagg 1138
>gb|AC154335.1| Mus musculus BAC clone RP24-499C1 from 13, complete sequence Length = 177948 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3730 ttttctgtttacagagctgtga 3751 |||||||||||||||||||||| Sbjct: 103238 ttttctgtttacagagctgtga 103259
>gb|BC057018.1| Mus musculus regulatory factor X, 1 (influences HLA class II expression), mRNA (cDNA clone MGC:67125 IMAGE:5705637), complete cds Length = 4167 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2985 cgccagctgctgccaccttcac 3006 |||||||||||||||||||||| Sbjct: 2412 cgccagctgctgccaccttcac 2391
>dbj|AB002530.1| Neurospora crassa mus-23 gene, complete cds Length = 3720 Score = 44.1 bits (22), Expect = 3.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 gaggacgacgacatggacgagg 339 |||||||||||||||||||||| Sbjct: 1507 gaggacgacgacatggacgagg 1528
>dbj|AP001324.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-864N7, complete sequences Length = 230157 Score = 44.1 bits (22), Expect = 3.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2530 gtgcagttattgataatgatggtggt 2555 |||| ||||||||||||||||||||| Sbjct: 118147 gtgctgttattgataatgatggtggt 118122 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 766,941,255 Number of extensions: 42002121 Number of successful extensions: 240476 Number of sequences better than 10.0: 33 Number of HSP's gapped: 240455 Number of HSP's successfully gapped: 133 Length of query: 3956 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 3932 Effective length of database: 18,499,340,271 Effective search space: 72739405945572 Effective search space used: 72739405945572 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
