ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf18f19 |
|---|---|
| Clone Library Name | barley_pub |
>Q8BKC5:IMB3_MOUSE Importin beta-3 - Mus musculus (Mouse)| Length = 1097 Score = 38.5 bits (88), Expect = 0.091 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = +3 Query: 822 LETEGNMLRKAICSMMEEV-RTLIEDDDSWAVEILRGRGEVHRNTRFMVDCIMSVKMART 998 +ET+ +M RK IC + E+ R LI++D G + +F+ D + S M Sbjct: 99 METQSSM-RKKICDIAAELARNLIDED---------GNNQWPEGLKFLFDSVSSQNMGLR 148 Query: 999 SAQRHDAGNLPGMVDNSVDYLKDVLLRKSELC 1094 A H N PG+ N + DV+ R C Sbjct: 149 EAALHIFWNFPGIFGNQQQHYLDVIKRMLVQC 180
>O00410:IMB3_HUMAN Importin beta-3 - Homo sapiens (Human)| Length = 1097 Score = 36.6 bits (83), Expect = 0.35 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Frame = +3 Query: 822 LETEGNMLRKAICSMMEEV-RTLIEDDDSWAVEILRGRGEVHRNTRFMVDCIMSVKMART 998 +ET+ +M RK +C + E+ R LI++D G + +F+ D + S + Sbjct: 99 METQSSM-RKKVCDIAAELARNLIDED---------GNNQWPEGLKFLFDSVSSQNVGLR 148 Query: 999 SAQRHDAGNLPGMVDNSVDYLKDVLLRKSELC 1094 A H N PG+ N + DV+ R C Sbjct: 149 EAALHIFWNFPGIFGNQQQHYLDVIKRMLVQC 180
>Q91YD9:WASL_MOUSE Neural Wiskott-Aldrich syndrome protein - Mus musculus (Mouse)| Length = 501 Score = 35.8 bits (81), Expect = 0.59 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = +3 Query: 27 SLSSSSPTKGVPLPSRSMAGRLAAVPEETTDGSPAACPPTNLYRDSIRMVPLPRG 191 +L SS+P+ P P SMAG A P P PP L D VP P G Sbjct: 346 ALPSSAPSGPPPPPPPSMAGSTAPPPPPPPPPPPGPPPPPGLPSDGDHQVPAPSG 400
>Q9K012:PURA_NEIMB Adenylosuccinate synthetase - Neisseria meningitidis serogroup B| Length = 432 Score = 33.1 bits (74), Expect = 3.8 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Frame = +3 Query: 684 LAVPGAETLRAVVDMFICVSSVSCYMFTTLVISPEAKSIFGEI-----GGLLETEGNMLR 848 L V G +T+ ++ I S+ C++ + +V+SPEA + GEI G+ EG + Sbjct: 44 LVVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEA--LLGEIDELNAAGVKNVEGRLKI 101 Query: 849 KAICSMMEEVRTLIEDDDSWAVEILRGRGEV 941 C ++ ++ A E RG+G++ Sbjct: 102 APTCPLILPYHIALDQ----AREASRGKGKI 128
>Q9JV25:PURA_NEIMA Adenylosuccinate synthetase - Neisseria meningitidis serogroup A| Length = 432 Score = 33.1 bits (74), Expect = 3.8 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Frame = +3 Query: 684 LAVPGAETLRAVVDMFICVSSVSCYMFTTLVISPEAKSIFGEI-----GGLLETEGNMLR 848 L V G +T+ ++ I S+ C++ + +V+SPEA + GEI G+ EG + Sbjct: 44 LVVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEA--LLGEIDELNAAGVKNVEGRLKI 101 Query: 849 KAICSMMEEVRTLIEDDDSWAVEILRGRGEV 941 C ++ ++ A E RG+G++ Sbjct: 102 APTCPLILPYHIALDQ----AREASRGKGKI 128
>Q39FS0:PURA1_BURS3 Adenylosuccinate synthetase 1 - Burkholderia sp. (strain 383)| (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) Length = 448 Score = 33.1 bits (74), Expect = 3.8 Identities = 24/69 (34%), Positives = 36/69 (52%) Frame = +3 Query: 684 LAVPGAETLRAVVDMFICVSSVSCYMFTTLVISPEAKSIFGEIGGLLETEGNMLRKAICS 863 L + G +T+ ++ I V+CY+ +V+SPEA +F EIG L E N+ + S Sbjct: 53 LIIGGKKTILRLIPSGIMREGVACYIGNGVVLSPEA--LFKEIGELEEAGVNVRDRLFIS 110 Query: 864 MMEEVRTLI 890 E TLI Sbjct: 111 ---EATTLI 116
>Q9Y2N3:PO121_HUMAN Nuclear envelope pore membrane protein POM 121 - Homo sapiens| (Human) Length = 1229 Score = 33.1 bits (74), Expect = 3.8 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = +2 Query: 53 GRPSTKQKHGRPACRRAGGDHRRLPGRLPANQPLPRLDPDGPSSPRAVH 199 G+P Q PA G D R PGR P +P PR P P + R H Sbjct: 129 GKPGPPQ----PAPAPEGQDLRNRPGRRPPARPAPRSTPPSPPTHRVHH 173
>P73769:MUTS_SYNY3 DNA mismatch repair protein mutS - Synechocystis sp. (strain PCC| 6803) Length = 878 Score = 33.1 bits (74), Expect = 3.8 Identities = 25/105 (23%), Positives = 42/105 (40%) Frame = +3 Query: 831 EGNMLRKAICSMMEEVRTLIEDDDSWAVEILRGRGEVHRNTRFMVDCIMSVKMARTSAQR 1010 EGN++R + ++E+R +EDD+ W + EV T ++ Sbjct: 458 EGNLIRSGVNPTLDEMRQSLEDDNQWLANL-----EV------------------TEREK 494 Query: 1011 HDAGNLPGMVDNSVDYLKDVLLRKSELCPDLSLRYLFLLNNSYFI 1145 NL + + Y + KSE PD +R L+N +I Sbjct: 495 TGIANLKVGYNKAFGYYLSLPRSKSEQAPDNYIRKQTLVNEERYI 539
>O08816:WASL_RAT Neural Wiskott-Aldrich syndrome protein - Rattus norvegicus (Rat)| Length = 501 Score = 32.7 bits (73), Expect = 5.0 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = +3 Query: 27 SLSSSSPTKGVPLPSRSMAGRLAAVPEETTDGSPAACPPTNLYRDSIRMVPLPRG 191 +L SS+P+ P P SMAG A P P PP L D VP G Sbjct: 346 ALPSSAPSGPPPPPPLSMAGSTAPPPPPPPPPPPGPPPPPGLPSDGDHQVPASSG 400
>Q63US2:PURA_BURPS Adenylosuccinate synthetase - Burkholderia pseudomallei| (Pseudomonas pseudomallei) Length = 448 Score = 32.7 bits (73), Expect = 5.0 Identities = 24/69 (34%), Positives = 38/69 (55%) Frame = +3 Query: 684 LAVPGAETLRAVVDMFICVSSVSCYMFTTLVISPEAKSIFGEIGGLLETEGNMLRKAICS 863 L + G +T+ ++ I V+CY+ +V+SPEA +F EIG LE G +R+ + Sbjct: 53 LIIGGKKTILRLIPSGIMREGVACYIGNGVVLSPEA--LFKEIGE-LEEAGLSVRERL-- 107 Query: 864 MMEEVRTLI 890 + E TLI Sbjct: 108 FISEATTLI 116
>Q3JRR4:PURA_BURP1 Adenylosuccinate synthetase - Burkholderia pseudomallei (strain| 1710b) Length = 448 Score = 32.7 bits (73), Expect = 5.0 Identities = 24/69 (34%), Positives = 38/69 (55%) Frame = +3 Query: 684 LAVPGAETLRAVVDMFICVSSVSCYMFTTLVISPEAKSIFGEIGGLLETEGNMLRKAICS 863 L + G +T+ ++ I V+CY+ +V+SPEA +F EIG LE G +R+ + Sbjct: 53 LIIGGKKTILRLIPSGIMREGVACYIGNGVVLSPEA--LFKEIGE-LEEAGLSVRERL-- 107 Query: 864 MMEEVRTLI 890 + E TLI Sbjct: 108 FISEATTLI 116
>Q62JX6:PURA_BURMA Adenylosuccinate synthetase - Burkholderia mallei (Pseudomonas| mallei) Length = 448 Score = 32.7 bits (73), Expect = 5.0 Identities = 24/69 (34%), Positives = 38/69 (55%) Frame = +3 Query: 684 LAVPGAETLRAVVDMFICVSSVSCYMFTTLVISPEAKSIFGEIGGLLETEGNMLRKAICS 863 L + G +T+ ++ I V+CY+ +V+SPEA +F EIG LE G +R+ + Sbjct: 53 LIIGGKKTILRLIPSGIMREGVACYIGNGVVLSPEA--LFKEIGE-LEEAGLSVRERL-- 107 Query: 864 MMEEVRTLI 890 + E TLI Sbjct: 108 FISEATTLI 116
>P23327:SRCH_HUMAN Sarcoplasmic reticulum histidine-rich calcium-binding protein| precursor - Homo sapiens (Human) Length = 699 Score = 32.3 bits (72), Expect = 6.5 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 737 TDEHVYHGPKRLCSGNSE----DGVDEDEHRRDTCFPKPCHRDRRHLVNGDHQISDIED* 570 +D H +HGP G+ E D D+D+ D + H+ RH +G + D+ D Sbjct: 228 SDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDG 287 Query: 569 HGESSNPSPDHVLERRRRHVLD 504 H + P H R R H D Sbjct: 288 H---HHRDPSH---RHRSHEED 303
>Q12888:TP53B_HUMAN Tumor suppressor p53-binding protein 1 - Homo sapiens (Human)| Length = 1972 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +2 Query: 59 PSTKQKHGRPACRRAGGDHRRLPGRLPANQPLPRLDPDGPSSPRAVHQI-DSVR 217 P + + GRP R G +PG L P L PD S R V ++ DS R Sbjct: 1395 PRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKSFSRVVPRVPDSTR 1448
>P23730:IFEA_ASCSU Intermediate filament protein A - Ascaris suum (Pig roundworm)| (Ascaris lumbricoides) Length = 497 Score = 32.0 bits (71), Expect = 8.5 Identities = 14/49 (28%), Positives = 31/49 (63%) Frame = +3 Query: 822 LETEGNMLRKAICSMMEEVRTLIEDDDSWAVEILRGRGEVHRNTRFMVD 968 LE E N+LR+ I +++EE+ + +++ +A E+ + R ++ + T +D Sbjct: 110 LEAEINLLRRRIANIIEEIARIKKENLQFANELTKARSDLDQETLNRID 158 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 310,208,648 Number of extensions: 7031979 Number of successful extensions: 20587 Number of sequences better than 10.0: 15 Number of HSP's gapped: 20550 Number of HSP's successfully gapped: 15 Length of query: 591 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 472 Effective length of database: 68,045,334 Effective search space: 32117397648 Effective search space used: 32117397648 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
