ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf13d16 |
|---|---|
| Clone Library Name | barley_pub |
>O75521:PECI_HUMAN Peroxisomal 3,2-trans-enoyl-CoA isomerase - Homo sapiens (Human)| Length = 359 Score = 45.8 bits (107), Expect = 7e-04 Identities = 22/63 (34%), Positives = 38/63 (60%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 ++V+L+L L K A +GPC + +P ++AKW +W LG++ E A + Y++L+S Sbjct: 24 NEVKLKLYALYKQATEGPC-NMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSS 82 Query: 1448 FVP 1456 P Sbjct: 83 LSP 85
>Q9WUR2:PECI_MOUSE Peroxisomal 3,2-trans-enoyl-CoA isomerase - Mus musculus (Mouse)| Length = 358 Score = 44.7 bits (104), Expect = 0.001 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 ++V+L+L L K A +G C + +P L ++AKW +W LG++ E A + Y++L+S Sbjct: 24 NEVKLRLYALYKQATEGTC-NMPKPGMLDFVNKAKWDAWNALGSLPKETARQNYVDLVSS 82 Query: 1448 F-------VPGWMGDKTSSTEKREVDVDSEGALLTMT 1537 G G + E +++ V SE + +T Sbjct: 83 LSSSSEAPSQGKRGADEKARESKDILVTSEDGITKIT 119
>Q5R7V3:ACBD5_PONPY Acyl-CoA-binding domain-containing protein 5 - Pongo pygmaeus| (Orangutan) Length = 525 Score = 43.1 bits (100), Expect = 0.004 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 4/134 (2%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 +++ L+ K A +GPC ++P P R KW +W LG+M E AM Y+ + + Sbjct: 67 NEMMLKFYSFYKQATEGPC-KLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMSAYVEEMKK 125 Query: 1448 FVPGWMGDKTSSTEKREVDVDSEGALLTMTAHTSDPQINQGNEGSTSIDEGPLTNPPNPE 1627 + + TEK E + G + D + + ++ ++ +D LT+ PN + Sbjct: 126 II-----ETMPMTEKVEELLRVIGPFYEI---VEDKKSGRSSDITSDLD-NVLTSTPNAK 176 Query: 1628 ----KGQSSDIPAE 1657 K +SSD AE Sbjct: 177 TVNGKAESSDSGAE 190
>Q641E3:ACBD5_XENLA Acyl-CoA-binding domain-containing protein 5 - Xenopus laevis| (African clawed frog) Length = 467 Score = 42.4 bits (98), Expect = 0.007 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 4/135 (2%) Frame = +2 Query: 1265 NSDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLS 1444 ++++ L+ K A GPC + A+P P R KW +W LG+M E AM Y++ + Sbjct: 31 SNEMMLKFYSFYKQATLGPC-NTARPGFWDPVGRYKWDAWNSLGDMSKEDAMIAYVDEMK 89 Query: 1445 EFVPGWMGDKTSSTEKREVDVDSEGALLTMTAHTSDPQINQGNEGSTSIDEGPLTNPPNP 1624 + + + T+K E + G + D + +G+ G TS LT+ PN Sbjct: 90 KII-----ETMPVTDKVEELLQVIGPFYEI---VEDKKHGRGS-GVTSELGSVLTSTPNG 140 Query: 1625 E----KGQSSDIPAE 1657 + K +SSD AE Sbjct: 141 KAVNGKAESSDSGAE 155
>Q640U0:ACBD5_XENTR Acyl-CoA-binding domain-containing protein 5 - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 458 Score = 40.8 bits (94), Expect = 0.021 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Frame = +2 Query: 1265 NSDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLS 1444 ++++ L+ K A GPC + +P P R KW +W LG+M E AM Y++ + Sbjct: 31 SNEMMLKFYSFYKQATLGPC-NTPRPGFWDPVGRYKWDAWNSLGDMSKEDAMIAYVDEMK 89 Query: 1445 EFVPGWMGDKTSSTEKREVDVDSEGALLTMTAHTSDPQINQGNEGSTSIDEGPLTNPPNP 1624 + + + TEK E + G + D + +G+ G TS LT+ PN Sbjct: 90 KIL-----ETMPVTEKVEELLQVIGPFYEI---VEDKKHGRGS-GVTSELGSVLTSTPNG 140 Query: 1625 E----KGQSSDIPAE 1657 + K +SSD AE Sbjct: 141 KAVNGKAESSDSGAE 155
>Q502L1:ACBD5_DANRE Acyl-CoA-binding domain-containing protein 5 - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 501 Score = 39.3 bits (90), Expect = 0.061 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +2 Query: 1271 DVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKY---MNLL 1441 D+ L+ K A GPC + +P P +AKW +W LG M E AM Y + L+ Sbjct: 34 DMMLKFYSYYKQATQGPC-NIPRPGFWDPVGKAKWDAWSSLGEMPKEEAMAAYVDDLKLI 92 Query: 1442 SEFVP 1456 E +P Sbjct: 93 LESMP 97
>Q5ZHQ6:ACBD5_CHICK Acyl-CoA-binding domain-containing protein 5 - Gallus gallus| (Chicken) Length = 492 Score = 38.5 bits (88), Expect = 0.10 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 +++ L+ K A GPC + +P P R KW +W LG+M E AM Y+ + + Sbjct: 32 NEMMLKFYSFYKQATQGPC-NIPRPGFWDPIGRYKWDAWSALGDMSKEEAMIAYVEEMKK 90 Query: 1448 FVPGWMGDKTSSTEKREVDVDSEGALLTMTAHTSDPQINQGNEGSTSIDEGPLTNPPNPE 1627 + + T+K E + G + + + N+G+ G TS + + PN + Sbjct: 91 IL-----ESMPMTDKVEELLQVIGPFYEIV----EDKKNRGS-GLTSDLSNVMNSTPNIK 140 Query: 1628 ----KGQSSDIPAE 1657 K +SSD AE Sbjct: 141 AVNGKAESSDSGAE 154
>A0FKI7:ACBD5_RAT Acyl-CoA-binding domain-containing protein 5 - Rattus norvegicus| (Rat) Length = 506 Score = 38.1 bits (87), Expect = 0.14 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 +++ L+ K A +GPC ++P P R KW +W LG+M E AM Y+ + + Sbjct: 68 NEMMLRFYSFYKQATEGPC-KLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKK 126 Query: 1448 FV 1453 + Sbjct: 127 II 128
>Q5XG73:ACBD5_MOUSE Acyl-CoA-binding domain-containing protein 5 - Mus musculus (Mouse)| Length = 508 Score = 38.1 bits (87), Expect = 0.14 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 +++ L+ K A +GPC ++P P R KW +W LG+M E AM Y+ + + Sbjct: 68 NEMMLKFYSFYKQATEGPC-KLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKK 126 Query: 1448 FV 1453 + Sbjct: 127 II 128
>Q5T8D3:ACBD5_HUMAN Acyl-CoA-binding domain-containing protein 5 - Homo sapiens (Human)| Length = 534 Score = 38.1 bits (87), Expect = 0.14 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLSE 1447 +++ L+ K A +GPC ++P P R KW +W LG+M E AM Y+ + + Sbjct: 65 NEMMLKFYSFYKQATEGPC-KLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMIAYVEEMKK 123 Query: 1448 FV 1453 + Sbjct: 124 II 125
>P07106:ACBD5_BOVIN Acyl-CoA-binding domain-containing protein 5 - Bos taurus (Bovine)| Length = 533 Score = 38.1 bits (87), Expect = 0.14 Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 30/154 (19%) Frame = +2 Query: 1268 SDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKY---MNL 1438 +++ L+ K A +GPC ++P P R KW +W LG+M E AM Y M Sbjct: 66 NEMMLKFYSFYKQATEGPC-KLSKPGFWDPVGRYKWDAWSSLGDMTKEEAMIAYVEEMKK 124 Query: 1439 LSEFVP------------------------GWMGDKTS-STEKREVDVDSEGALLTMT-- 1537 + E +P G D TS EK ++ G +L T Sbjct: 125 ILETMPMTEKVEELLHVIGPFYEIVEDKKSGRSSDLTSVRLEKISKCLEDLGNVLASTPN 184 Query: 1538 AHTSDPQINQGNEGSTSIDEGPLTNPPNPEKGQS 1639 A T + + + G+ S +E +P PE S Sbjct: 185 AKTVNGKAESSDSGAESEEEAAQEDPKRPEPRDS 218
>Q9BR61:ACBD6_HUMAN Acyl-CoA-binding domain-containing protein 6 - Homo sapiens (Human)| Length = 282 Score = 37.4 bits (85), Expect = 0.23 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 15/85 (17%) Frame = +2 Query: 1253 LSKLNSDVQLQLQGLLKVAVD---------------GPCYDAAQPLTLRPSSRAKWVSWQ 1387 L++L LQGL++VA G C + +P + KW +W+ Sbjct: 42 LAELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNC-NTPKPSFFDFEGKQKWEAWK 100 Query: 1388 KLGNMHPEIAMEKYMNLLSEFVPGW 1462 LG+ P AM++Y+ ++ + PGW Sbjct: 101 ALGDSSPSQAMQEYIAVVKKLDPGW 125
>P32323:AGA1_YEAST A-agglutinin anchorage subunit precursor - Saccharomyces cerevisiae| (Baker's yeast) Length = 725 Score = 37.0 bits (84), Expect = 0.30 Identities = 37/126 (29%), Positives = 54/126 (42%) Frame = -2 Query: 663 SCFTPTASVA*TSCFCNPATGTSLGATSAPRSC*WLVXXXXSTQRTSP*EDSAPESRGFX 484 S +P S ++ NP T TSL +TS S + TSP S S Sbjct: 164 SIISPVTSTLSSTTSSNPTT-TSLSSTSTSPS----------STSTSPSSTSTSSSSTST 212 Query: 483 XXXXXXXXVKSGCFLPTSPSSFCSCDTAPRNSSGARSVAGTPSSAATHSVLPSATVAGAF 304 S P+S S+ S T+ +SS + S + T +S+++ S PS+T + Sbjct: 213 SSSSTSTSSSSTSTSPSSTSTSSSL-TSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSS 271 Query: 303 STSTHP 286 STST P Sbjct: 272 STSTSP 277
>Q5RJK8:ACBD6_RAT Acyl-CoA-binding domain-containing protein 6 - Rattus norvegicus| (Rat) Length = 282 Score = 35.4 bits (80), Expect = 0.88 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +2 Query: 1364 RAKWVSWQKLGNMHPEIAMEKYMNLLSEFVPGW 1462 + KW +W+ LG+ P AM++Y+ + + PGW Sbjct: 93 KQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGW 125
>Q9D061:ACBD6_MOUSE Acyl-CoA-binding domain-containing protein 6 - Mus musculus (Mouse)| Length = 282 Score = 35.4 bits (80), Expect = 0.88 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +2 Query: 1364 RAKWVSWQKLGNMHPEIAMEKYMNLLSEFVPGW 1462 + KW +W+ LG+ P AM++Y+ + + PGW Sbjct: 93 KQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGW 125
>O88573:AFF1_MOUSE AF4/FMR2 family member 1 - Mus musculus (Mouse)| Length = 1217 Score = 35.0 bits (79), Expect = 1.2 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = -3 Query: 962 PYSELLHVEQQLLRQILVSFPHPLLR-HRGSLLEPQREPIRADSLQ*LAPPASQVQRQ 792 PYS +H +++L+++ S+P PL H S EP R P L ++ PA+Q Q+Q Sbjct: 334 PYSNEVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSRFPFPTKDLLHVS-PATQSQKQ 390
>Q2KHT9:ACBD4_BOVIN Acyl-CoA-binding domain-containing protein 4 - Bos taurus (Bovine)| Length = 303 Score = 35.0 bits (79), Expect = 1.2 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = +2 Query: 1280 LQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYM 1432 L+ K A GPC QP P R KW +W LG M E AM Y+ Sbjct: 40 LRFYSYYKQATMGPCL-IPQPGFWDPIGRYKWEAWNSLGQMSREEAMSAYI 89
>O22643:ACBP_FRIAG Acyl-CoA-binding protein - Fritillaria agrestis (Stinkbells)| Length = 87 Score = 34.7 bits (78), Expect = 1.5 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +2 Query: 1265 NSDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLS 1444 +++ +L L GL K + GP D +P P RAKW +W+ + E AM Y+ + Sbjct: 22 SNENKLILYGLYKQSTVGPV-DTGRPGMFSPRERAKWDAWKAVEGKSKEEAMGDYITKVK 80 Query: 1445 EFV 1453 + + Sbjct: 81 QLL 83
>P42281:ACBP_DROME Acyl-CoA-binding protein homolog - Drosophila melanogaster (Fruit| fly) Length = 86 Score = 33.9 bits (76), Expect = 2.6 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = +2 Query: 1253 LSKLNSDVQ-LQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKY 1429 L+K SD + LQL L K A G D A+P L +AKW +W K E A ++Y Sbjct: 16 LTKRPSDDEFLQLYALFKQASVGD-NDTAKPGLLDLKGKAKWEAWNKQKGKSSEAAQQEY 74 Query: 1430 MNLLSEFV 1453 + + V Sbjct: 75 ITFVEGLV 82
>Q6DGF9:ACBD4_RAT Acyl-CoA-binding domain-containing protein 4 - Rattus norvegicus| (Rat) Length = 326 Score = 33.9 bits (76), Expect = 2.6 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +2 Query: 1280 LQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYM 1432 L+ K A GPC +P P R KW +W LG M E AM Y+ Sbjct: 38 LRFYSYYKQATAGPCL-VPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYI 87
>Q5R7P6:ACBD4_PONPY Acyl-CoA-binding domain-containing protein 4 - Pongo pygmaeus| (Orangutan) Length = 269 Score = 33.5 bits (75), Expect = 3.4 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +2 Query: 1280 LQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYM 1432 L+ K A GPC +P P R KW +W LG M E AM Y+ Sbjct: 40 LRFYSYYKQATMGPCL-VPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYI 89
>Q8NC06:ACBD4_HUMAN Acyl-CoA-binding domain-containing protein 4 - Homo sapiens (Human)| Length = 268 Score = 33.5 bits (75), Expect = 3.4 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +2 Query: 1280 LQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYM 1432 L+ K A GPC +P P R KW +W LG M E AM Y+ Sbjct: 40 LRFYSYYKQATMGPCL-VPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYI 89
>Q92357:CFR1_SCHPO Cell fusion protein cfr1 - Schizosaccharomyces pombe (Fission yeast)| Length = 620 Score = 33.1 bits (74), Expect = 4.4 Identities = 27/123 (21%), Positives = 46/123 (37%) Frame = +2 Query: 791 LDAVPGKQEEQVIEANQHESAPVAAPRVIPDAAAKDEEMKQXXXXXXXXXXXXXQNKEEA 970 L++ P Q+ +EAN H+ P + P V E++ KEE Sbjct: 393 LESTPAAQQTSEVEANNHQEKPSSLPAV--------EQINVNEENNTPETEGLEDEKEEN 444 Query: 971 QCEAGTVDQQEKLVSKEELALKKSDDLNVSQEVVPNDKVVVQLPEEETTLLGMPEDEARA 1150 A ++ QE+ S E + + +E PN+ + EE + + E A Sbjct: 445 NTAAESLINQEETTSGEAVTKSTVESSANEEEAEPNEII------EENAVKSLLNQEGPA 498 Query: 1151 SME 1159 + E Sbjct: 499 TNE 501
>P35487:ODPAT_MOUSE Pyruvate dehydrogenase E1 component alpha subunit, testis-specific| form, mitochondrial precursor - Mus musculus (Mouse) Length = 391 Score = 32.7 bits (73), Expect = 5.7 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2 Query: 1920 HTITAY--HGYCYKLNLMIRLILADIQAAGGRC 1828 H IT+Y HG+CY L ++ ILA++ G C Sbjct: 114 HVITSYRAHGFCYTRGLSVKSILAELTGRKGGC 146
>P57752:ACBP_ARATH Acyl-CoA-binding protein - Arabidopsis thaliana (Mouse-ear cress)| Length = 92 Score = 32.7 bits (73), Expect = 5.7 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +2 Query: 1265 NSDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMNLLS 1444 N D+ L L GL K A GP D ++P RAKW +W+ + E AM Y+ + Sbjct: 23 NEDL-LILYGLYKQAKFGPV-DTSRPGMFSMKERAKWDAWKAVEGKSSEEAMNDYITKVK 80 Query: 1445 EFV 1453 + + Sbjct: 81 QLL 83
>P29803:ODPAT_HUMAN Pyruvate dehydrogenase E1 component alpha subunit, testis-specific| form, mitochondrial precursor - Homo sapiens (Human) Length = 388 Score = 32.3 bits (72), Expect = 7.5 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = -2 Query: 1920 HTITAY--HGYCYKLNLMIRLILADIQAAGGRC 1828 H IT+Y HG CY L +R ILA++ G C Sbjct: 111 HVITSYRAHGVCYTRGLSVRSILAELTGRRGGC 143
>P34618:CEC1_CAEEL Chromo domain protein cec-1 - Caenorhabditis elegans| Length = 304 Score = 32.3 bits (72), Expect = 7.5 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +2 Query: 977 EAGTVDQQEKLVSKEELALKKSDDLNVSQEVVPNDKVVVQ-LPEEETTLLGMPEDEARAS 1153 E + D++ K +EE+ DD +E VP K VQ PEEE ++ G E+E++ Sbjct: 131 EHSSADKKSKAEDEEEV----EDD----EEPVPKKKKEVQEEPEEEESVEGEDEEESQEV 182 Query: 1154 MEFEEWEGIERSEVEK 1201 + +E E +E E E+ Sbjct: 183 EDLKEDEKMEEDEKEE 198
>O92529:POLG_HCVT5 Genome polyprotein [Contains: Core protein p21 - Hepatitis C virus| genotype 6b (isolate Th580) (HCV) Length = 3019 Score = 32.0 bits (71), Expect = 9.8 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -2 Query: 1707 NALISPMQEILDDRYVHSAGMSELCPFSGLGGFVSGPSS 1591 +A+ +Q++ D +V SE P SGLGG ++GPSS Sbjct: 2344 SAVSQALQQLADKVFVEDTSTSE--PSSGLGGSIAGPSS 2380
>Q01042:IE68_SHV21 Immediate-early protein - Saimiriine herpesvirus 2 (strain 11)| (SaHV-2) (Herpesvirus saimiri) Length = 407 Score = 32.0 bits (71), Expect = 9.8 Identities = 27/129 (20%), Positives = 50/129 (38%) Frame = +2 Query: 812 QEEQVIEANQHESAPVAAPRVIPDAAAKDEEMKQXXXXXXXXXXXXXQNKEEAQCEAGTV 991 +E++ E E+ A +A A++EE ++ + EEA+ EA Sbjct: 102 EEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEE 161 Query: 992 DQQEKLVSKEELALKKSDDLNVSQEVVPNDKVVVQLPEEETTLLGMPEDEARASMEFEEW 1171 + +E+ + E A + ++ E + + EE E+ + E EE Sbjct: 162 EAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEA 221 Query: 1172 EGIERSEVE 1198 E E +E E Sbjct: 222 EEAEEAEEE 230
>Q61495:DSG1A_MOUSE Desmoglein-1 alpha precursor - Mus musculus (Mouse)| Length = 1057 Score = 32.0 bits (71), Expect = 9.8 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = -2 Query: 1806 ITHTNTHYSTNISTTTNTVQI*SYEEGISSDLSNALISPMQEILDDRYVHSAGMSELCPF 1627 +T N ++N+ T +Q S G S ++ L S I+ +R V AGMSE+ Sbjct: 928 LTIPNPQETSNVVVTERVIQPTSGMIGNLS-MTPELSSAHNVIVTERVVSGAGMSEIAGT 986 Query: 1626 SGLGGFVSGPSSMLV 1582 +GLGG SS LV Sbjct: 987 AGLGGVGGIGSSGLV 1001
>Q28181:CNGB1_BOVIN 240 kDa protein of rod photoreceptor CNG-channel [Contains: Glutamic| acid-rich protein - Bos taurus (Bovine) Length = 1394 Score = 32.0 bits (71), Expect = 9.8 Identities = 35/137 (25%), Positives = 57/137 (41%) Frame = +2 Query: 794 DAVPGKQEEQVIEANQHESAPVAAPRVIPDAAAKDEEMKQXXXXXXXXXXXXXQNKEEAQ 973 +A P +E+ + E P PR+ + ++EE + + EE + Sbjct: 331 EAAPADEEKGKVV----EQTPRELPRIQEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKE 386 Query: 974 CEAGTVDQQEKLVSKEELALKKSDDLNVSQEVVPNDKVVVQLPEEETTLLGMPEDEARAS 1153 E G ++E+ KEE +K ++ +E D+ + EEE G E+E Sbjct: 387 EEEGREKEEEEGEKKEEEGREKEEEEGGEKE----DEEGREKEEEEGR--GKEEEEGG-- 438 Query: 1154 MEFEEWEGIERSEVEKR 1204 E EE EG + EVE R Sbjct: 439 -EKEEEEGRGKEEVEGR 454
>P31787:ACBP_YEAST Acyl-CoA-binding protein - Saccharomyces cerevisiae (Baker's yeast)| Length = 87 Score = 32.0 bits (71), Expect = 9.8 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +2 Query: 1256 SKLNSDVQLQLQGLLKVAVDGPCYDAAQPLTLRPSSRAKWVSWQKLGNMHPEIAMEKYMN 1435 +K ++D L+L L K A G D +P R KW +W+ L E A ++Y+ Sbjct: 18 TKPSTDELLELYALYKQATVGD-NDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIA 76 Query: 1436 LLSEFV 1453 L+ + + Sbjct: 77 LVDQLI 82 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 275,853,755 Number of extensions: 5429699 Number of successful extensions: 16544 Number of sequences better than 10.0: 32 Number of HSP's gapped: 16488 Number of HSP's successfully gapped: 32 Length of query: 661 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 541 Effective length of database: 67,771,039 Effective search space: 36664132099 Effective search space used: 36664132099 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
