ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf16c16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os08g0168700:Os08g0168700 33 0.20
2AK103050:Os01g0930300 30 0.99
3AK100846:Os01g0521500 30 1.3
4AK104501:Os02g0817600 30 1.7
5Os07g0668000:Os07g0668000 29 2.2
6Os07g0404500:Os07g0404500 29 2.2
7AK103753:Os01g0967700 29 2.2
8AK061279:Os04g0401100 29 2.2
9Os09g0548300:Os09g0548300 29 2.9
10Os01g0516700:Os01g0516700 29 2.9
11AK120093:Os01g0898900 28 4.9
12AK104081:Os08g0112500 28 4.9
13AK072696:Os08g0112500 28 4.9
14Os10g0196900:Os10g0196900 28 6.4
15AK107318: 28 6.4
16AK111414:Os03g0341000 28 6.4
17AK108637:Os07g0569800 28 6.4
18AK107073:Os08g0561600 28 6.4
19AK066884:Os08g0561600 28 6.4
20Os11g0654400:Os11g0654400 27 8.3
21Os11g0652900:Os11g0652900 27 8.3
22Os07g0195900:Os07g0195900 27 8.3
23AK111193: 27 8.3
24AK110134: 27 8.3
25AK110025: 27 8.3
26AK101821: 27 8.3
27AK120635:Os08g0326900 27 8.3
28AK070982:Os02g0810900 27 8.3
29AK068738:Os06g0172000 27 8.3
30AK063435:Os01g0151600 27 8.3
31AK060976:Os02g0810900 27 8.3

>Os08g0168700:Os08g0168700 |
          Length = 694
 Score = 32.7 bits (73), Expect = 0.20
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
 Frame = +2

Query: 11  LHSQPPTRGDEPHSRSP---ACRDYLGCSSP----------SSASPLPQHLDGGREKKDP 151
           L+S   T G     R P   ACR   GC +P          SS SPLP H  G   +   
Sbjct: 303 LNSMASTSGMRRWRRWPRHAACRGSRGCRTPPEPPLDPPPHSSTSPLPTHATGVAARHWS 362

Query: 152 SAATSCGDGVCHRGHLSIGLLNF 220
             +T   + +   GHL   ++++
Sbjct: 363 CRSTRSNESLLTNGHLDTTIIDW 385



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>AK103050:Os01g0930300 |
          Length = 322

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 16/67 (23%), Positives = 28/67 (41%)
 Frame = +2

Query: 296 NLDH*QHHAQLHPCLHPTSRCESSTSRPRWVTQPLGTVHINVDSAIFANDSCLGVGGFIR 475
           NL   +H  Q    +    +C+ S     W+    G + +NVD + + +D   G G  +R
Sbjct: 135 NLIKGKHVVQYGSSMPLPRQCKPSAESSSWIRPQEGWMKLNVDGSYYPSDGKGGTGAVLR 194

Query: 476 VHHGRCV 496
              G  +
Sbjct: 195 DSSGNLI 201



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>AK100846:Os01g0521500 |
          Length = 603

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
 Frame = -1

Query: 323 ARDVASDPDCSALELPSTAFAPTEVLNVVYKKAPKN----*EDLWTDARGDRHHLRTKSP 156
           +RD +SDPD  +   PS + A +   +   +   ++         + +R  RHH      
Sbjct: 24  SRDASSDPDPDSASSPSPSSASSPSRSPDRRSRSRSSGSKRRKASSSSRRHRHH-----H 78

Query: 155 HSDPSSLARHRDVEEEERPRK-----EKSTRGSRGTLANGNGA 42
           H       R RD ++E R R+     E+  RG   + ++G+G+
Sbjct: 79  HKSSGRSRRSRDDDDERRRRRRRRDEERGRRGGDASESSGSGS 121



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>AK104501:Os02g0817600 |
          Length = 281

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 86  SSPSSASPLPQHLDGGREKKDPSAATSCGDGVCHRGHLSIGLLNF 220
           SS SS+SP      GG+  + P+A TS G       H S G++ +
Sbjct: 71  SSVSSSSPAAAAAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGW 115



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>Os07g0668000:Os07g0668000 |
          Length = 574

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 158 PHS-DPSSLARHRDVEEEERPRKEKSTRGSR--GTLANGNGARR 36
           PH+ DPSSL ++   +E +  R+++  R  R  G   NG GAR+
Sbjct: 414 PHACDPSSLPQYPPSKEMDAKRRDEEARRLRAAGGRVNGEGARK 457



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>Os07g0404500:Os07g0404500 |
          Length = 902

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 149 DPSSLARHRDVEEEERPRKEKSTRGSRGTL 60
           DPS++   R+ EE+ER R++K  R + G +
Sbjct: 843 DPSNVESRREEEEDERRREKKKRRSTGGPI 872



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>AK103753:Os01g0967700 |
          Length = 343

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +2

Query: 317 HAQLHPCLHPTSRCESSTSRPRWVTQPLGTVHINVDSAIFANDSCLGVGGFIRVHHGRCV 496
           HA L    HP    + +  R +WV    G + +N D A  A +   G    +R H G  V
Sbjct: 244 HASLRKGKHP----KVNVQRNKWVPPVDGNLKLNFDGAFRAVNKSGGYDFLVRDHRGCAV 299

Query: 497 L 499
           L
Sbjct: 300 L 300



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>AK061279:Os04g0401100 |
          Length = 216

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 5   SPLHSQPPTRGDEPHSRSPAC--RDYLGCSSP--SSASPLPQHLDGGREKKDPSAATSCG 172
           SP+ S  PT     HSR+  C  R     ++P  ++A+  P HL   R ++   AA   G
Sbjct: 89  SPIPSPSPTHASSYHSRTLTCTRRRRRAAAAPPRTAATATPSHLRRRRRQRSQRAAARLG 148



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>Os09g0548300:Os09g0548300 |
          Length = 569

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = +2

Query: 74  YLGCSSPSSASPLPQHLDGGREKKDPSAATSCGDGVCHRGHLSIGLLNFSVPFYIQRLVP 253
           + G    +S  P P       +  D +A  S G    H G +   LLN ++P  + + + 
Sbjct: 81  FYGEEDAASDQPFPARASPSDDANDSTAVRSLGGD--HPGEIKKELLNLALPAIVGQAID 138

Query: 254 PLGQ 265
           P+ Q
Sbjct: 139 PVAQ 142



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>Os01g0516700:Os01g0516700 |
          Length = 433

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 1   GVSPPFAATNARRRAPFPFASVPR 72
           G  PP   ++A   AP+PFA +PR
Sbjct: 110 GAPPPSLESDAAASAPYPFAPIPR 133



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>AK120093:Os01g0898900 |
          Length = 402

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 223 GAFLYTTFSTSVGAKAVLGNSKALQS 300
           GA+LYT F  +V A A + N KAL+S
Sbjct: 208 GAYLYTLFFVTVPALASVYNEKALKS 233



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>AK104081:Os08g0112500 |
          Length = 303

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 167 TKSPHSDPSSLARHRDVEEEERPRKEKSTRGSRGTLANGN---GARRRALVAANG 12
           TK    DPSSL ++   +E +   +++  R  R     G+     RR+ L A NG
Sbjct: 24  TKPYACDPSSLPKYPPSKEYDAKLRDEEARRQRAAAVKGHESEAGRRKQLPAPNG 78



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>AK072696:Os08g0112500 |
          Length = 748

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 167 TKSPHSDPSSLARHRDVEEEERPRKEKSTRGSRGTLANGN---GARRRALVAANG 12
           TK    DPSSL ++   +E +   +++  R  R     G+     RR+ L A NG
Sbjct: 469 TKPYACDPSSLPKYPPSKEYDAKLRDEEARRQRAAAVKGHESEAGRRKQLPAPNG 523



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>Os10g0196900:Os10g0196900 |
          Length = 271

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 366 LPRDLVGLHNRWARYISMLIVLFSRMIAAWEWVV 467
           +P  +   H R A +I  ++ + +RM AA EW++
Sbjct: 47  IPNVIPSEHGRGADHIGFIVAVHTRMAAAVEWLL 80



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>AK107318: |
          Length = 697

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 260 GQRQYLATPRRC-NLDH*QHHAQLHPCLHPTSRCESSTSRPRWVTQPLGTVHINVDSAIF 436
           G RQY++T RRC  L         H C+      E  T  P  ++  L +  ++  + +F
Sbjct: 371 GLRQYISTIRRCRRLIFIACGTSYHSCMAVRGAFEDLTEIP--ISVELASDFLDRQAPVF 428

Query: 437 ANDSCLGV 460
            +D+C+ V
Sbjct: 429 RDDTCVFV 436



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>AK111414:Os03g0341000 |
          Length = 243

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 149 DPSSLARHRDVEEEERPRKEKSTRGSRGTLANGNGARRR 33
           DP+  A   + E+E++P   +  RG R TL    G RRR
Sbjct: 37  DPAEQAAADEEEQEQQPAARRQRRGERRTLY--RGIRRR 73



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>AK108637:Os07g0569800 |
          Length = 588

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +2

Query: 2   ESPLHSQPPTRGDEPHSRSPACR---DYLGCSSPSSASPLPQHLDGGREKKDPSAATS 166
           E+PL + PPT     +S  P+     D    SS SS++       G R     SAAT+
Sbjct: 510 EAPLPALPPTMPVPTYSSLPSLALYCDAAAASSSSSSAGFSSSTSGERSSTSSSAATA 567



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>AK107073:Os08g0561600 |
          Length = 502

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 206 LWTDARGDRHHLRTKSPHSDPSSLAR 129
           +W +  G  HHLR+  P   PSS  R
Sbjct: 22  VWVEPPGKTHHLRSPPPPPSPSSSKR 47



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>AK066884:Os08g0561600 |
          Length = 577

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 206 LWTDARGDRHHLRTKSPHSDPSSLAR 129
           +W +  G  HHLR+  P   PSS  R
Sbjct: 22  VWVEPPGKTHHLRSPPPPPSPSSSKR 47



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>Os11g0654400:Os11g0654400 |
          Length = 268

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = -3

Query: 285 GVAKYCLCPNGGTKRCI*KGT----EKLRRPMDRCPR*QTPSPHEVAALGSFFSRP 130
           G+   C+ P GG K  I +      E ++  MDR P  +   P EVAA  +F   P
Sbjct: 195 GIRVNCVAP-GGVKTDICQDETIDPELIKSEMDRLPMRRLAEPEEVAATVAFLCMP 249



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>Os11g0652900:Os11g0652900 |
          Length = 264

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = -3

Query: 285 GVAKYCLCPNGGTKRCI*KGT----EKLRRPMDRCPR*QTPSPHEVAALGSFFSRP 130
           G+   C+ P GG K  I +      E ++  MDR P  +   P EVAA  +F   P
Sbjct: 191 GIRVNCVAP-GGVKTDICQDETIDPELIKSEMDRLPMRRLAEPEEVAATVAFLCMP 245



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>Os07g0195900:Os07g0195900 |
          Length = 1219

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +2

Query: 8   PLHSQPPTRGDEPHSRSPACRDYLGCSSPSSASPLPQHL 124
           PL SQPP     P    P  +D  G SS SSA P P H+
Sbjct: 85  PLPSQPPPLLPPPPK--PPTKD--GASSSSSAPPSPTHV 119



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>AK111193: |
          Length = 759

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 38  DEPHSRSPACRDYLGCSSPSSASPLPQHLDGGREKKDPSAA 160
           D   + +  CRD++     + AS LP+HL   ++++ P+AA
Sbjct: 570 DPADANNVRCRDFIAAVDIAEASRLPKHL--RQQQEQPTAA 608



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>AK110134: |
          Length = 944

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 4/129 (3%)
 Frame = +2

Query: 35  GDEPHSRSPACRD-YLGCSSPSSASPLPQHLDGGREKKDPSAATSCGDGVCHRGHLSIGL 211
           G  P + +P     Y G   PS+++  P    GG      ++ +       H    ++  
Sbjct: 114 GPSPANSAPRSNSGYTGFDPPSASNNSPMRQHGGSHSSAYTSHSPYAPSQSHAPDAAMHP 173

Query: 212 LNFSVPF---YIQRLVPPLGQRQYLATPRRCNLDH*QHHAQLHPCLHPTSRCESSTSRPR 382
              S+P    Y      P   +     P+     H   H   HP  HP    +    +  
Sbjct: 174 QRSSMPSHYDYQNNYPHPHHPQNPQMPPQHHPHPHPHPHPHPHPHPHPHPSQQQHHQQAH 233

Query: 383 WVTQPLGTV 409
           W T PL +V
Sbjct: 234 WNTGPLPSV 242



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>AK110025: |
          Length = 968

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +2

Query: 14  HSQPPTRGDEPHSRSPACRDYLGCSSPSSASPLPQHLDGGREKKDPSAATS 166
           HS   TR   PH  SP+ +      SPS+ S  P  L+G   +   S ATS
Sbjct: 25  HSPSATRSRHPHHHSPSSQG--STPSPSNLSH-PASLNGDDARHGTSPATS 72



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>AK101821: |
          Length = 310

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 5   SPLHSQPPTRGDEPHSRSPACRDYLGCSSPSSASP 109
           S  H+ PP     P SRS + R    CS+  SA P
Sbjct: 246 STSHAAPPRTASSPTSRSTSRRPRSACSTGVSAFP 280



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>AK120635:Os08g0326900 |
          Length = 114

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 17/60 (28%), Positives = 22/60 (36%)
 Frame = -1

Query: 197 DARGDRHHLRTKSPHSDPSSLARHRDVEEEERPRKEKSTRGSRGTLANGNGARRRALVAA 18
           D RG         P S+  +  + R      RPR     RG   ++  G   RRR L  A
Sbjct: 48  DGRGGTDSTSRSPPRSEKGASRQWRQRRRSPRPRAAAPDRGGEPSVRGGCWRRRRHLRVA 107



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>AK070982:Os02g0810900 |
          Length = 331

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +2

Query: 95  SSASPLPQHLDGGREKKDPSAATSCGDGVCHRGHLSIGL 211
           SS     QHLDGG      SAA S  DG    G + +GL
Sbjct: 281 SSIFDFSQHLDGGAVAASASAAGSRVDGGEQCGLMELGL 319



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>AK068738:Os06g0172000 |
          Length = 511

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 98  RKEKSTRGSRGTLANGNGARRRALVAANGGE 6
           R+   TRGS  +LA   G RRR     +GGE
Sbjct: 44  REPARTRGSSSSLAGAAGERRRRRGEEDGGE 74



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>AK063435:Os01g0151600 |
          Length = 358

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
 Frame = +3

Query: 282 LQGAAIWI-TSNITRSCIHVFTPHPGVSPLPRDLVGLHNRW---------ARYISMLIVL 431
           LQG  + + TS   ++C++ FT  PG    P   V  H  W          RY   +I L
Sbjct: 250 LQGLELRMSTSTRLKACLYSFTS-PGGPTYPTRAVR-HAAWNTLDLLFPVGRYPRHVISL 307

Query: 432 FSRMIAAWEWVVLSVFTMDVVCWN 503
           F R++  W W           CWN
Sbjct: 308 FFRLLYPWYW--------PSSCWN 323



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>AK060976:Os02g0810900 |
          Length = 331

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +2

Query: 95  SSASPLPQHLDGGREKKDPSAATSCGDGVCHRGHLSIGL 211
           SS     QHLDGG      SAA S  DG    G + +GL
Sbjct: 281 SSIFDFSQHLDGGAVAASASAAGSRVDGGEQCGLMELGL 319


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,762,736
Number of extensions: 538508
Number of successful extensions: 2110
Number of sequences better than 10.0: 31
Number of HSP's gapped: 2108
Number of HSP's successfully gapped: 31
Length of query: 206
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 110
Effective length of database: 11,555,919
Effective search space: 1271151090
Effective search space used: 1271151090
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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