| Clone Name | FLbaf16c16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 86 tcttctccttcctcggcctctcct 109 |||||||||||||||||||||||| Sbjct: 1428297 tcttctccttcctcggcctctcct 1428320
>gb|AY050668.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (PPP1R14A) gene, complete cds Length = 169660 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tctccttcctcggcctctcctc 110 |||||||||||||||||||||| Sbjct: 123854 tctccttcctcggcctctcctc 123833
>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the 3' end of a novel gene, a guanidinoacetate N-methyltransferase (GAMT) pseudogene and a CpG island, complete sequence Length = 164345 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 444 atagctgcttgggagtgggtggttttatcc 473 |||||||||||| ||||||||| ||||||| Sbjct: 30434 atagctgcttggcagtgggtggctttatcc 30405
>gb|AC011479.7| Homo sapiens chromosome 19 clone CTB-102L5, complete sequence Length = 169661 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tctccttcctcggcctctcctc 110 |||||||||||||||||||||| Sbjct: 123855 tctccttcctcggcctctcctc 123834
>gb|AC193793.1| Gallus gallus BAC clone CH261-30P23 from chromosome z, complete sequence Length = 181135 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 gctcttctccttcctcggcctctcc 108 |||||||||||||||| |||||||| Sbjct: 164597 gctcttctccttcctctgcctctcc 164573
>gb|DQ244584.1| Zea mays clone 9423 mRNA sequence Length = 1388 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cctcggcctctcctcttcctc 116 ||||||||||||||||||||| Sbjct: 6 cctcggcctctcctcttcctc 26
>ref|NM_001072581.1| Oryza sativa (japonica cultivar-group) Os12g0126300 (Os12g0126300) mRNA, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ggtgctcttctccttcctcggcctc 105 ||||||||||||| ||||||||||| Sbjct: 153 ggtgctcttctccgtcctcggcctc 129
>ref|NM_001072237.1| Oryza sativa (japonica cultivar-group) Os11g0139500 (Os11g0139500) mRNA, partial cds Length = 4144 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 attttccagagataatgttca 545 ||||||||||||||||||||| Sbjct: 4116 attttccagagataatgttca 4136
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 attttccagagataatgttca 545 ||||||||||||||||||||| Sbjct: 38902 attttccagagataatgttca 38922
>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence Length = 189126 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 87 cttctccttcctcggcctctcctcttcct 115 |||||||||||| |||||| ||||||||| Sbjct: 89848 cttctccttccttggcctcccctcttcct 89876
>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence Length = 135248 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 tcacattatatacaacattat 563 ||||||||||||||||||||| Sbjct: 10688 tcacattatatacaacattat 10708
>emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-193I1 on chromosome 3, complete sequence Length = 119364 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 tcacattatatacaacattat 563 ||||||||||||||||||||| Sbjct: 110050 tcacattatatacaacattat 110070
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 ggtgctcttctccttcctcggcctc 105 ||||||||||||| ||||||||||| Sbjct: 1273613 ggtgctcttctccgtcctcggcctc 1273637 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 ttttccagagataatgttca 545 |||||||||||||||||||| Sbjct: 1762323 ttttccagagataatgttca 1762342
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 attttccagagataatgttca 545 ||||||||||||||||||||| Sbjct: 1821072 attttccagagataatgttca 1821092
>emb|AL139378.15| Human DNA sequence from clone RP11-271B5 on chromosome 13 Contains the FGF9 gene for fibroblast growth factor 9 (glia-activating factor (GAF, HBFG-9)), a ribosomal protein S7 (40S ribosomal protein S7) (RPS7) pseudogene and two CpG islands, complete sequence Length = 166703 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgctcttctccttcctcggcc 103 ||||||||||||||||||||| Sbjct: 143148 tgctcttctccttcctcggcc 143168
>dbj|AK120730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B09, full insert sequence Length = 4145 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 attttccagagataatgttca 545 ||||||||||||||||||||| Sbjct: 4117 attttccagagataatgttca 4137
>dbj|AK103113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119E15, full insert sequence Length = 1169 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 attttccagagataatgttca 545 ||||||||||||||||||||| Sbjct: 1141 attttccagagataatgttca 1161
>gb|AC125341.4| Mus musculus BAC clone RP24-459O3 from 6, complete sequence Length = 167607 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 ttctccttcctcggcctctcctcttcctc 116 ||||||||||||| |||||| |||||||| Sbjct: 98003 ttctccttcctcgtcctctcttcttcctc 98031
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ggtgctcttctccttcctcggcctc 105 ||||||||||||| ||||||||||| Sbjct: 19169 ggtgctcttctccgtcctcggcctc 19145
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 ggtgctcttctccttcctcggcctc 105 ||||||||||||| ||||||||||| Sbjct: 155556 ggtgctcttctccgtcctcggcctc 155532
>ref|NM_133493.2| Homo sapiens CD109 molecule (CD109), mRNA Length = 9447 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 4216 ttcacattatatacaacatt 4197
>ref|XM_518588.2| PREDICTED: Pan troglodytes CD109 (CD109), mRNA Length = 5884 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 3903 ttcacattatatacaacatt 3884
>gb|AY788891.1| Homo sapiens CD109 mRNA, complete cds Length = 4369 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 3765 ttcacattatatacaacatt 3746
>ref|XM_001112930.1| PREDICTED: Macaca mulatta similar to CD109, transcript variant 2 (LOC716136), mRNA Length = 5599 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 4222 ttcacattatatacaacatt 4203
>ref|XM_001112898.1| PREDICTED: Macaca mulatta similar to CD109, transcript variant 1 (LOC716136), mRNA Length = 5445 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 4068 ttcacattatatacaacatt 4049
>gb|AC151912.1| Pan troglodytes chromosome X clone PTB-093M21 map human ortholog q26.2, complete sequence Length = 180904 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttctccttcctcggcctctc 107 |||||||||||||||||||| Sbjct: 98261 ttctccttcctcggcctctc 98242
>ref|XM_659192.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6680.2), mRNA Length = 1470 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 atgtcttcaccccacatcca 353 |||||||||||||||||||| Sbjct: 164 atgtcttcaccccacatcca 145
>gb|AY149920.1| Homo sapiens activated T-cell marker CD109 (CD109) mRNA, complete cds Length = 4338 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 3791 ttcacattatatacaacatt 3772
>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence Length = 167927 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cttctccttcctcggcctct 106 |||||||||||||||||||| Sbjct: 110304 cttctccttcctcggcctct 110323
>gb|AY376991.1| Litopenaeus vannamei microsatellite TUGAPv7-9.188 sequence Length = 517 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 85 ctcttctccttcctcggcctctcctcttcctc 116 ||||||||||||||| ||||| ||||||||| Sbjct: 488 ctcttctccttcctcctcctcttctcttcctc 457
>dbj|AK123960.1| Homo sapiens cDNA FLJ41966 fis, clone PUAEN2009174 Length = 2843 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 2000 ttcacattatatacaacatt 1981
>gb|AC090008.14| Mus muclulus Strain C57BL6/J chromosome 2 BAC, RP23-163H21, Complete Sequence, complete sequence Length = 196733 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 89 tctccttcctcggcctctcctcttcctc 116 ||||||||||| |||| ||||||||||| Sbjct: 146552 tctccttcctctgcctttcctcttcctc 146525
>ref|XM_380516.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00340.1) partial mRNA Length = 2391 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acatatcaatgttgatagtg 428 |||||||||||||||||||| Sbjct: 852 acatatcaatgttgatagtg 833
>ref|NM_001046031.1| Bos taurus junctional sarcoplasmic reticulum protein 1 (JSRP1), mRNA gb|BC110244.1| Bos taurus junctional sarcoplasmic reticulum protein 1, mRNA (cDNA clone MGC:134155 IMAGE:8064284), complete cds Length = 1274 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttctccttcctcggcctctcctc 110 ||||||||| |||||||||||||| Sbjct: 953 cttctcctttctcggcctctcctc 930
>gb|AC091877.2| Homo sapiens chromosome 5 clone CTD-3061E14, complete sequence Length = 147536 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ataggtcttcttaatttttc 222 |||||||||||||||||||| Sbjct: 31317 ataggtcttcttaatttttc 31336
>emb|CR730384.2|CNS0GQID Tetraodon nigroviridis full-length cDNA Length = 1229 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcttctccttcctcggcctc 105 |||||||||||||||||||| Sbjct: 145 tcttctccttcctcggcctc 164
>emb|CR729517.2|CNS0GPUB Tetraodon nigroviridis full-length cDNA Length = 1224 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcttctccttcctcggcctc 105 |||||||||||||||||||| Sbjct: 141 tcttctccttcctcggcctc 160
>emb|CR719070.2|CNS0GHS4 Tetraodon nigroviridis full-length cDNA Length = 671 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 cttcctcggcctctcctcttcctc 116 ||||||| |||||||||||||||| Sbjct: 214 cttcctccgcctctcctcttcctc 191
>gb|AF410459.1| Homo sapiens CD109 (CD109) mRNA, complete cds Length = 5883 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 3903 ttcacattatatacaacatt 3884
>gb|AC104806.3| Homo sapiens BAC clone RP11-584P21 from 4, complete sequence Length = 147777 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttctccttcctcggcctctc 107 |||||||||||||||||||| Sbjct: 36797 ttctccttcctcggcctctc 36778
>emb|CR639312.2|CNS0ES9I Tetraodon nigroviridis full-length cDNA Length = 1433 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcttctccttcctcggcctc 105 |||||||||||||||||||| Sbjct: 144 tcttctccttcctcggcctc 163
>emb|AL591480.8| Human DNA sequence from clone RP11-525G3 on chromosome 6 Contains the 3' end of the gene for CD109 (CD109) and a CpG island, complete sequence Length = 91419 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 3632 ttcacattatatacaacatt 3613
>emb|AL356257.14| Human DNA sequence from clone RP11-789G22 on chromosome 13 Contains the 5' end of the ABCC4 gene for ATP-binding cassette, sub-family C (CFTR/MRP), member4, a novel gene and a CpG island, complete sequence Length = 193483 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttctccttcctcggcctctc 107 |||||||||||||||||||| Sbjct: 56063 ttctccttcctcggcctctc 56044
>gb|AC092751.4| Genomic sequence for Mus musculus, clone RP23-113P18, complete sequence Length = 209990 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 tctccttcctcggcctctcctcttcctc 116 ||||||||||| |||| ||||||||||| Sbjct: 113714 tctccttcctctgcctttcctcttcctc 113741
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gacgagccccattcccgttc 57 |||||||||||||||||||| Sbjct: 2668979 gacgagccccattcccgttc 2668960
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 tcttcctcaacatctcgatg 128 |||||||||||||||||||| Sbjct: 310404 tcttcctcaacatctcgatg 310385
>emb|BX545848.23| Zebrafish DNA sequence from clone DKEY-8O19 in linkage group 20 Contains the gene for a novel protein (zgc:63746), the gene for a novel protein (zgc:55614), the gene for the 5' end of a novel protein similar to mouse and human cyclin-dependent kinase (CDC2-like) 11 (CDK11), the gene for a novel protein similar to vertebrate mitogen-activated protein kinase kinase kinase 5 (MAP3K5), a novel gene and eleven CpG islands, complete sequence Length = 199986 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tttttcggtgcctttttata 236 |||||||||||||||||||| Sbjct: 179070 tttttcggtgcctttttata 179051
>emb|AL834478.1|HSM805581 Homo sapiens mRNA; cDNA DKFZp762L1111 (from clone DKFZp762L1111) Length = 2938 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 2018 ttcacattatatacaacatt 1999
>emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chromosome 11 Contains the genes for two novel 7 transmembrane receptor (rhodopsin family) domain-containing proteins, a high mobility group box 1 (Hmgb1) pseudogene, the Cias1 gene for cold autoinflammatory syndrome 1 homolog (human), a novel gene (4933439C10Rik), the gene for a novel protein (D130067D09), a ribosomal protein L18 (Rpl18) pseudogene, an ariadne homolog 2 (Drosophila) (Arih2) pseudogene, the gene for a novel zinc finger domain-containing protein, the 3' end of the gene for a novel protein and one CpG island, complete sequence Length = 157300 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 ctcttctccttcctcggcctctcctctt 112 ||||||||||||||| ||||||||||| Sbjct: 33557 ctcttctccttcctcctcctctcctctt 33530
>gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosome 16, complete sequence Length = 202933 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 aatgatagctgcttgggagt 459 |||||||||||||||||||| Sbjct: 85599 aatgatagctgcttgggagt 85580
>gb|AC079921.5| Homo sapiens BAC clone RP11-360F5 from 4, complete sequence Length = 189796 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ataggtcttcttaatttttc 222 |||||||||||||||||||| Sbjct: 11772 ataggtcttcttaatttttc 11791
>gb|AC104463.3| Homo sapiens chromosome 1 clone RP11-569A11, complete sequence Length = 156818 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttctccttcctcggcctctc 107 |||||||||||||||||||| Sbjct: 117711 ttctccttcctcggcctctc 117692
>gb|AC146590.25| Medicago truncatula clone mth2-145p10, complete sequence Length = 130834 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttttcggtgcctttttata 236 |||||||||||||||||||| Sbjct: 58023 tttttcggtgcctttttata 58042
>ref|XM_317010.2| Anopheles gambiae str. PEST ENSANGP00000019306 (ENSANGG00000016817), partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tcccgttcgccagcgtgccgcgac 73 ||||||||||||||| |||||||| Sbjct: 169 tcccgttcgccagcgcgccgcgac 192
>emb|BX641095.1|HSM806923 Homo sapiens mRNA; cDNA DKFZp686N23150 (from clone DKFZp686N23150) Length = 4237 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ttcacattatatacaacatt 561 |||||||||||||||||||| Sbjct: 3578 ttcacattatatacaacatt 3559
>gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complete sequence Length = 166988 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cttctccttcctcggcctct 106 |||||||||||||||||||| Sbjct: 10361 cttctccttcctcggcctct 10380
>emb|AL773563.12| Mouse DNA sequence from clone RP23-414L19 on chromosome 2, complete sequence Length = 184665 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 tctccttcctcggcctctcctcttcctc 116 ||||||||||| |||| ||||||||||| Sbjct: 68751 tctccttcctctgcctttcctcttcctc 68778
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ttttccagagataatgttca 545 |||||||||||||||||||| Sbjct: 78159 ttttccagagataatgttca 78140
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ttttccagagataatgttca 545 |||||||||||||||||||| Sbjct: 4598 ttttccagagataatgttca 4579 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 102,707,656 Number of extensions: 5720565 Number of successful extensions: 122940 Number of sequences better than 10.0: 59 Number of HSP's gapped: 122940 Number of HSP's successfully gapped: 60 Length of query: 620 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 598 Effective length of database: 18,508,616,841 Effective search space: 11068152870918 Effective search space used: 11068152870918 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)