ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf13c12 |
|---|---|
| Clone Library Name | barley_pub |
>Q9S775:PKL_ARATH CHD3-type chromatin remodeling factor PICKLE - Arabidopsis thaliana| (Mouse-ear cress) Length = 1384 Score = 528 bits (1361), Expect = e-149 Identities = 326/789 (41%), Positives = 464/789 (58%), Gaps = 37/789 (4%) Frame = +2 Query: 173 PLSEVDATVHTKQELTPESKVYGNINEIAGNGHDDT------AYEFLVKWAGKSNIHNSW 334 PL+E+D + + T S+ G D ++LVKW G S +H SW Sbjct: 96 PLNEIDKILDCEMRPTKSSE----------QGSSDAEPKPIFVKQYLVKWKGLSYLHCSW 145 Query: 335 ISESELRTL------AKRKLENYKAKYGMGLINICKD-------QWCQPQRVIALRVSLD 475 + E E + K ++ N+ + M N +D +W R++A R Sbjct: 146 VPEKEFQKAYKSNHRLKTRVNNFHRQ--MESFNNSEDDFVAIRPEWTTVDRILACREEDG 203 Query: 476 EVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQFKNFECQAL-DRDVRGNCANARNR 652 E+E L+K+ L YDEC WE E + + + + +FK+ + +DV + RN Sbjct: 204 ELEY-LVKYKELSYDECYWE--SESDISTFQNEIQRFKDVNSRTRRSKDVD----HKRNP 256 Query: 653 QELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSL 832 ++ P+ LKG +L P+QLE LN+LR W K +VILADEMGLGKT+ + A L+SL Sbjct: 257 RDFQQFDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASL 315 Query: 833 CCEFKINL-PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWH-EGDA 1006 F+ NL P LV+ PLST+ NW EFA+WAP +NVV Y G+A+AR+ IR++E++ D Sbjct: 316 ---FEENLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQ 372 Query: 1007 TQIGKSK----------KSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXX 1156 +I K K K KF+VLLT+YEM+ +D+ L+ + WE +IVDEGHR Sbjct: 373 KKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDS 432 Query: 1157 XXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKV 1336 HR+LLTGTPLQNN+ E++ L++FL F SL F+E+F ++ E++ Sbjct: 433 KLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQI 492 Query: 1337 EELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKG 1516 L K++APH+LRR+KKD MK++PPK E ++ V+L+S+Q EYY+A+ T+NYQVL T KG Sbjct: 493 SRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVL--TKKG 550 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSD 1696 GA SL NI+M+LRKVC HPY++ G EP + +++ KL LL M+ L Sbjct: 551 GAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQ 610 Query: 1697 GHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFN-QDKTRFVFL 1873 GHRVLI++Q +LD+LEDY T + +ER+DG V AERQ I RFN ++ +F FL Sbjct: 611 GHRVLIYTQFQHMLDLLEDYCTHK--KWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFL 668 Query: 1874 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 2053 LSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAHR+GQ+N++++YRL+ R ++EER Sbjct: 669 LSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEER 728 Query: 2054 ILQLAKKKLMLDQLFVNKSE----SQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKH 2221 ++QL KKK++L+ L V K + +Q+E++DIIR+G++ELF + D DEA Sbjct: 729 MMQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKELFASED-------DEA----- 776 Query: 2222 DVSDIEVKHRRKTGGLGDVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAESTDGDLD 2401 G S K+ +D+ AI +LLDR L S D + + Sbjct: 777 -------------------------GKSGKIHYDDAAIDKLLDR-DLVEAEEVSVDDEEE 810 Query: 2402 NDMLGTVKV 2428 N L KV Sbjct: 811 NGFLKAFKV 819
>Q6PDQ2:CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 - Mus musculus (Mouse)| Length = 1915 Score = 499 bits (1286), Expect = e-140 Identities = 321/784 (40%), Positives = 430/784 (54%), Gaps = 70/784 (8%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRTLAKRKLENYKAK------------------------ 394 +F VKW G S H SW+SE +L + NY+ K Sbjct: 535 QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594 Query: 395 -----------YGMGLINICKDQWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWERL 541 Y G+ K +W R++ V LIKW LPYD+ +WE Sbjct: 595 DPKFAEMEERFYRYGI----KPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWE-- 648 Query: 542 DEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPK------------ 685 E + ++ L Q + + L R G + +L L + P+ Sbjct: 649 SEDVEIQDYDLFKQ-SYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYER 707 Query: 686 -----ELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 + GG L P+Q+E LNWLR W + + ILADEMGLGKTV FL SL E Sbjct: 708 QPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 767 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWH-EGDATQIGKS- 1024 P LV PLST+ NW EF WAP + VV Y G +R+ IR+ E+ E +A + GK Sbjct: 768 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKA 827 Query: 1025 -----KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXX 1189 + S KF+VLLT+YE++ +D L S+ W LIVDE HR Sbjct: 828 SRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSL 887 Query: 1190 QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHM 1369 QH++LLTGTPLQNN+ E+++LLNFL P F +L F E+F ++A +++++L ++ PHM Sbjct: 888 QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHM 947 Query: 1370 LRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVM 1549 LRRLK D KN+P KTE +V VEL+ +Q +YY+ +LT+N++ L G GG SLLN+VM Sbjct: 948 LRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARG-GGNQVSLLNVVM 1006 Query: 1550 QLRKVCNHPYLIPGTEPESGS-PEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFS 1720 L+K CNHPYL P E+ P +++ I+AS KL LL MLK L GHRVLIFS Sbjct: 1007 DLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFS 1066 Query: 1721 QMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGL 1897 QMTK+LD+LED+L E G K +ER+DG ++ RQ AI RFN + F FLLSTR+ GL Sbjct: 1067 QMTKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124 Query: 1898 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AKKK Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184 Query: 2078 LMLDQLFVNK-------SESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDI 2236 +ML L V S S++E++DI+++GTEELF++ G DN E D Sbjct: 1185 MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGED-------- 1236 Query: 2237 EVKHRRKTGGLGDVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAESTDGDLDNDMLG 2416 S+ + +D+ AI RLLDR+ T E T+ N+ L Sbjct: 1237 ----------------------SSVIHYDDKAIERLLDRNQDET---EDTELQGMNEYLS 1271 Query: 2417 TVKV 2428 + KV Sbjct: 1272 SFKV 1275
>Q14839:CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 - Homo sapiens (Human)| Length = 1912 Score = 499 bits (1286), Expect = e-140 Identities = 321/784 (40%), Positives = 430/784 (54%), Gaps = 70/784 (8%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRTLAKRKLENYKAK------------------------ 394 +F VKW G S H SW+SE +L + NY+ K Sbjct: 542 QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601 Query: 395 -----------YGMGLINICKDQWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWERL 541 Y G+ K +W R++ V LIKW LPYD+ +WE Sbjct: 602 DPKFAEMEERFYRYGI----KPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWE-- 655 Query: 542 DEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPK------------ 685 E + ++ L Q + + L R G + +L L + P+ Sbjct: 656 SEDVEIQDYDLFKQ-SYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYER 714 Query: 686 -----ELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 + GG L P+Q+E LNWLR W + + ILADEMGLGKTV FL SL E Sbjct: 715 QPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 774 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWH-EGDATQIGKS- 1024 P LV PLST+ NW EF WAP + VV Y G +R+ IR+ E+ E +A + GK Sbjct: 775 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKA 834 Query: 1025 -----KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXX 1189 + S KF+VLLT+YE++ +D L S+ W LIVDE HR Sbjct: 835 SRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSL 894 Query: 1190 QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHM 1369 QH++LLTGTPLQNN+ E+++LLNFL P F +L F E+F ++A +++++L ++ PHM Sbjct: 895 QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHM 954 Query: 1370 LRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVM 1549 LRRLK D KN+P KTE +V VEL+ +Q +YY+ +LT+N++ L G GG SLLN+VM Sbjct: 955 LRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARG-GGNQVSLLNVVM 1013 Query: 1550 QLRKVCNHPYLIPGTEPESGS-PEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFS 1720 L+K CNHPYL P E+ P +++ I+AS KL LL MLK L GHRVLIFS Sbjct: 1014 DLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFS 1073 Query: 1721 QMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGL 1897 QMTK+LD+LED+L E G K +ER+DG ++ RQ AI RFN + F FLLSTR+ GL Sbjct: 1074 QMTKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131 Query: 1898 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AKKK Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191 Query: 2078 LMLDQLFVNK-------SESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDI 2236 +ML L V S S++E++DI+++GTEELF++ G DN E D Sbjct: 1192 MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGED-------- 1243 Query: 2237 EVKHRRKTGGLGDVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAESTDGDLDNDMLG 2416 S+ + +D+ AI RLLDR+ T E T+ N+ L Sbjct: 1244 ----------------------SSVIHYDDKAIERLLDRNQDET---EDTELQGMNEYLS 1278 Query: 2417 TVKV 2428 + KV Sbjct: 1279 SFKV 1282
>Q8TDI0:CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 - Homo sapiens (Human)| Length = 1954 Score = 495 bits (1274), Expect = e-139 Identities = 323/796 (40%), Positives = 444/796 (55%), Gaps = 82/796 (10%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRTLAKRKLENYKAK----------YGMGLINI------ 418 EF VKWAG S H SW+ E +L NY+ K YG G + Sbjct: 510 EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 569 Query: 419 -----------------CKDQWCQPQRVIALRVSLDEVEEA--LIKWYGLPYDECTWERL 541 K +W R+ L S D+ + LIKW LPYD+CTWE + Sbjct: 570 NKDPLYAKMEERFYRYGIKPEWMMIHRI--LNHSFDKKGDVHYLIKWKDLPYDQCTWE-I 626 Query: 542 DEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARNRQEL----------TVLI------ 673 D+ + Y +L + L D R + ++L T ++ Sbjct: 627 DDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKF 686 Query: 674 -QQPKELK--GGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEF 844 +QP + GG L P+QLE LNWLR W + + ILADEMGLGKTV FL SL E Sbjct: 687 DKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG 746 Query: 845 KINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWH-EGDATQIGK 1021 P LV PLST+ NW EF WAP VV Y G +RS IR+ E+ E +A + GK Sbjct: 747 HSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGK 806 Query: 1022 S------KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXX 1183 + KF+VLLT+YE++ +D L S+ W L+VDE HR Sbjct: 807 KVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY 866 Query: 1184 XXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAP 1363 +++LLTGTPLQNN+ E+++LLNFL P F +L F E+F +++ +++++L L+ P Sbjct: 867 KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 926 Query: 1364 HMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNI 1543 HMLRRLK D KN+P KTE +V VEL+ +Q +YY+ +LT+N++ L + G GG SLLNI Sbjct: 927 HMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKG-GGNQVSLLNI 985 Query: 1544 VMQLRKVCNHPYLIPGTEPESG---SPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLI 1714 +M L+K CNHPYL P E+ + + +K+S KL LL MLK L +GHRVLI Sbjct: 986 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLI 1045 Query: 1715 FSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSC 1891 FSQMTK+LD+LED+L E+ +ER+DG ++ RQ AI RFN + F FLLSTR+ Sbjct: 1046 FSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAG 1103 Query: 1892 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAK 2071 GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK Sbjct: 1104 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAK 1163 Query: 2072 KKLMLDQLFV-------NKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVS 2230 +K+ML L V + S +++E++DI+++GTEELF+ D+V G S + V+ Sbjct: 1164 RKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFK--DDVEGM----MSQGQRPVT 1217 Query: 2231 DIEVKHRRKTGGLG----------DVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAE 2380 I K G L ++K + S+ + +D+ AI +LLDR+ T + Sbjct: 1218 PIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDAT---D 1274 Query: 2381 STDGDLDNDMLGTVKV 2428 T+ N+ L + KV Sbjct: 1275 DTELQNMNEYLSSFKV 1290
>Q12873:CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 - Homo sapiens (Human)| Length = 2000 Score = 493 bits (1269), Expect = e-138 Identities = 318/780 (40%), Positives = 430/780 (55%), Gaps = 66/780 (8%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRTLAKRKLENYKAK----------YGMGLINICKD--- 427 EF VKW G S H SW E +L NY+ K YG G + D Sbjct: 549 EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 608 Query: 428 --------------------QWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWERLDE 547 +W R+I V L+KW LPYD+ TWE + Sbjct: 609 VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEM 668 Query: 548 PIMLKYVHLVTQFKNFEC------------QALDRDVRGNCANARNRQELTVLIQ-QPKE 688 I H + +++ E + ++++G+ + + TV + QP+ Sbjct: 669 NIPEYEEHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRF 728 Query: 689 LK--GGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPC 862 + GG L +QLE LNWLR W + + ILADEMGLGKT+ FL SL E P Sbjct: 729 ITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPF 788 Query: 863 LVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWH-EGDATQIGKS----- 1024 LV PLST+ NW EF WAP VV Y G +R+ IR+ E+ E +A + GK Sbjct: 789 LVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMK 848 Query: 1025 -KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 + KF+VLLT+YE++ +D L S+ W L+VDE HR H++ Sbjct: 849 REAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKL 908 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRL 1381 LLTGTPLQNN+ E+++LLNFL P F +L F E+F +++ +++++L L+ PHMLRRL Sbjct: 909 LLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRL 968 Query: 1382 KKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRK 1561 K D KN+P KTE +V VEL+ +Q +YY+ +LT+N++ L + G GG SLLNI+M L+K Sbjct: 969 KADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRG-GGNQVSLLNIMMDLKK 1027 Query: 1562 VCNHPYLIPGTEPESGS-PEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTK 1732 CNHPYL P ES P +E IK+S KL LL ML+ L GHRVLIFSQMTK Sbjct: 1028 CCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTK 1087 Query: 1733 LLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGLGINL 1909 +LD+LED+L E G K +ER+DG ++ A RQ AI RFN + F FLLSTR+ GLGINL Sbjct: 1088 MLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL 1145 Query: 1910 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 2089 ATADTVII+DSD+NPH DIQA +RAHRIGQ+N++++YR V RASVEERI Q+AK+K+ML Sbjct: 1146 ATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLT 1205 Query: 2090 QLFVNK-------SESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIEVKH 2248 L V S S++E++DI+++GTEELF++ +E K+ D Sbjct: 1206 HLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEED---------------- 1249 Query: 2249 RRKTGGLGDVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAESTDGDLDNDMLGTVKV 2428 S+ + +D AI RLLDR+ T E TD N+ L + KV Sbjct: 1250 ------------------SSVIHYDNEAIARLLDRNQDAT---EDTDVQNMNEYLSSFKV 1288
>Q22516:CHD3_CAEEL Chromodomain helicase-DNA-binding protein 3 homolog - Caenorhabditis| elegans Length = 1787 Score = 480 bits (1235), Expect = e-134 Identities = 294/718 (40%), Positives = 404/718 (56%), Gaps = 49/718 (6%) Frame = +2 Query: 422 KDQWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWERLD------EPIMLKYVHLVTQ 583 K +W Q R+I ++ L+KW L Y+ TWER D E ++KY H + Sbjct: 497 KPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYEDAIIKYWHHRER 556 Query: 584 FKNFECQ-------ALDRDVRGN-------CANARNRQELTVLIQ---QPKELK--GGML 706 N E A R+ +G + + R+++ +L + QP + GG L Sbjct: 557 MLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISETGGNL 616 Query: 707 FPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLST 886 P+QLE +NWLR CW + ILADEMGLGKTV + FL +L E P L+ PLST Sbjct: 617 HPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLST 676 Query: 887 MPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSH-------KFN 1045 + NW E W P VV Y G +R IR++E+ D G K S KF+ Sbjct: 677 IINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFH 736 Query: 1046 VLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQ 1225 VLLT+YE + +D L S+ W L+VDE HR Q+RVLLTGTPLQ Sbjct: 737 VLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQ 796 Query: 1226 NNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNI 1405 NN+ E+++LLNFL P F L SF +F+E++ +++E+L L+ PHMLRRLK D + + Sbjct: 797 NNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGM 856 Query: 1406 PPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLI 1585 P K E +V VEL+++Q +YY+ +LT+N+ L N GG SL+NI+M+L+K CNHPYL Sbjct: 857 PSKQELIVRVELSAMQKKYYKNILTRNFDAL-NVKNGGTQMSLINIIMELKKCCNHPYLF 915 Query: 1586 PGT---EPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDY 1756 P+ + + IK + K LL ML+ L GHRVLIFSQMT +LDILED+ Sbjct: 916 MKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDF 975 Query: 1757 LTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVII 1933 +E G K +ER+DGS++ +RQ AI R+N + FVFLLSTR+ GLGINLATADTVII Sbjct: 976 CDVE-GYK-YERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVII 1033 Query: 1934 YDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 2101 YDSD+NPH DIQA +RAHR+GQ +++++YR V + SVEERI +AKKK++L L V Sbjct: 1034 YDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGL 1093 Query: 2102 ----NKSESQKEVEDIIRWGTEELFRNND-EVNGKDNDEASDAKHDVSDIEVKHRRKTGG 2266 KS S+ E++D++RWGTEELF+ + V G D + S K + +I Sbjct: 1094 GAKDGKSMSKTELDDVLRWGTEELFKEEEAPVEGADGEGTSSKKPNEQEI---------- 1143 Query: 2267 LGDVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAESTDGD----LDNDMLGTVKV 2428 +WD+ A+ LLDR+ E DG+ N+ L + KV Sbjct: 1144 ----------------VWDDAAVDFLLDRNK----EEEGQDGEKKEHWTNEYLSSFKV 1181
>O97159:CHDM_DROME Chromodomain helicase-DNA-binding protein Mi-2 homolog - Drosophila| melanogaster (Fruit fly) Length = 1982 Score = 469 bits (1208), Expect = e-131 Identities = 289/729 (39%), Positives = 412/729 (56%), Gaps = 85/729 (11%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESEL--------RTLAKR---------------------KLE 379 E+ +KW S H W+ E +L R+ ++ +++ Sbjct: 522 EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 581 Query: 380 NYKAKYGMGLI------------NICKDQWCQPQRVIALRVSLDEVEEALIKWYGLPYDE 523 +K K GM N K +W QRVI R + D L+KW LPYD+ Sbjct: 582 RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 641 Query: 524 CTWERLDEPIM-LKYVHLVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPKELK-- 694 TWE + I L+ Q C + R + + +L V + + +K Sbjct: 642 STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHY 701 Query: 695 -------------------------GGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGK 799 G L P+Q+E +NWLR W + + ILADEMGLGK Sbjct: 702 TPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 761 Query: 800 TVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIR 979 T+ FL SL E P LV VPLST+ NW EF WAP + Y G +R+ IR Sbjct: 762 TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 821 Query: 980 QYE--WHEGD--ATQIGKSKKS-HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXX 1144 + E + EG +++ + + + +KFNVLLT+YE++ +DA L S+ W VL+VDE HR Sbjct: 822 ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 881 Query: 1145 XXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELAT 1324 +++LLTGTPLQNN+ E+++LLNFL F L +F+ +F +++ Sbjct: 882 SNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 941 Query: 1325 AEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRN 1504 E+V+ L +++ PHMLRRLK D +KN+P K+E +V VEL+++Q ++Y+ +LTKNY+ L N Sbjct: 942 EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 1000 Query: 1505 TGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEF-LHEMR--IKASAKLALLHSM 1675 + GG SL+NI+M L+K CNHPYL P E+ + L+E+ KA+ KL LL M Sbjct: 1001 SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKM 1060 Query: 1676 LKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDK 1855 LK L + HRVLIFSQMTK+LDILED+L E +ER+DG ++ RQ AI RFN Sbjct: 1061 LKQLKAQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPG 1118 Query: 1856 TR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV 2032 + FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+N++++YR V Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178 Query: 2033 RASVEERILQLAKKKLMLDQLFV-------NKSESQKEVEDIIRWGTEELFRNNDEVNGK 2191 R SVEER+ Q+AK+K+ML L V + +++E++DI+R+GTE+LF+ +D+ Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKEDDKEEAI 1238 Query: 2192 DNDEASDAK 2218 D+ + A+ Sbjct: 1239 HYDDKAVAE 1247
>O16102:CHD3_DROME Chromodomain helicase-DNA-binding protein 3 - Drosophila melanogaster| (Fruit fly) Length = 892 Score = 465 bits (1197), Expect = e-130 Identities = 277/663 (41%), Positives = 391/663 (58%), Gaps = 35/663 (5%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRTLAKRKLENYKAKYGMGLINI---------------- 418 E+ +KW G S H WI E ++ + +++ + M ++ Sbjct: 112 EYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSDMEEPSLEELDDQDGNLHERFYR 171 Query: 419 --CKDQWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWERLDEPI--MLKYVHLVTQF 586 K +W QRVI + L+KW L Y++ +WER + I + + + L + Sbjct: 172 YGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALYKKL 231 Query: 587 KNFECQALDRDVRGNCANARNRQELTVLIQQPKELK--GGMLFPHQLEALNWLRKCWFKS 760 ++ + RD + + E QP LK G L P Q+E ++WLR W + Sbjct: 232 RSSN-KGRQRDRPAPTIDLNKKYE-----DQPVFLKEAGLKLHPFQIEGVSWLRYSWGQG 285 Query: 761 KNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVV 940 ILADEMGLGKT+ FL SL E P L+ VPLST+ NW E WAP L V Sbjct: 286 IPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCV 345 Query: 941 EYHGSARARSAIRQYE--WHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEV 1114 Y G AR+ IR++E + E + +++ +KFNV+LT+YE + VDA +L + W Sbjct: 346 TYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAA 405 Query: 1115 LIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLAS 1294 L+VDE HR +++LLTGTPLQNN+ E+++LLNFL F L + Sbjct: 406 LVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQT 465 Query: 1295 FEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM 1474 F+ +F +++ E+V+ L +++ PHMLRRLK D +K++PPK+E +V VEL+S+Q ++Y+ + Sbjct: 466 FQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI 525 Query: 1475 LTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESG-SPEFLHEMR--IKA 1645 LTKN++ L G GG SLLNI+M LRK CNHPYL P E+ SP L+EM KA Sbjct: 526 LTKNFKALNQKG-GGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKA 584 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S KL LL MLK L +D HRVL+FSQMTK+L++LE + LE ++R+DGS+ RQ Sbjct: 585 SGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHF--LEGEGYQYDRIDGSIKGDLRQ 642 Query: 1826 AAITRFNQD-KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 2002 AI RFN FVFLLSTR+ GLGINLATADTVII+DSD+NPH D+QA +RAHR+GQ Sbjct: 643 KAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQK 702 Query: 2003 NRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSESQKEVEDIIRWGTEEL 2161 ++++YR V SVEERI+Q+AK K+ML L V + S+ E+EDI+R+GTE+L Sbjct: 703 KKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDL 762 Query: 2162 FRN 2170 F++ Sbjct: 763 FKD 765
>Q9P2D1:CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 - Homo sapiens (Human)| Length = 2997 Score = 455 bits (1170), Expect = e-127 Identities = 281/737 (38%), Positives = 411/737 (55%), Gaps = 38/737 (5%) Frame = +2 Query: 116 EAVSDVPAAGTSEKGDIKLPLSEVDATVHTKQELTPESKVYGNINEIAGNGHDDTAYEFL 295 E D AAG + SE +V + + + ++ + +G + EF Sbjct: 770 EEADDADAAGRDSPSNTSQ--SEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEIEEFY 827 Query: 296 VKWAGKSNIHNSWISESELRT--LAKRKLENYKAKYGMG-LINICKDQWCQPQRVIALRV 466 VK+ S +H W S +L ++K++ +KAK G ++ +D+ P V R+ Sbjct: 828 VKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRI 887 Query: 467 -----SLDE----VEEALIKWYGLPYDECTWER---LDEPIMLKYVHLVTQFKNFECQAL 610 S D+ V L+KW LPY++ TWER +D+ + ++ L++ + E + + Sbjct: 888 MDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKLMS--REPETERV 945 Query: 611 DRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMG 790 +R + + + +E L +QLE +NWL W+ +N ILADEMG Sbjct: 946 ERPPADDWKKSESSREYK---------NNNKLREYQLEGVNWLLFNWYNMRNCILADEMG 996 Query: 791 LGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARS 970 LGKT+ + FL + + I+ P LV+ PLST+PNW EF +W LNVV YHGS +R Sbjct: 997 LGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRR 1054 Query: 971 AIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXX 1150 I+ YE + D Q K S+KF+ ++TT+EM+L D LR++PW +++DE HR Sbjct: 1055 TIQLYEMYFKDP-QGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNR 1113 Query: 1151 XXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAE 1330 +H+VLLTGTPLQN + E+++LL+FL+P+ FPS +F ++F +L T E Sbjct: 1114 NCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEE 1173 Query: 1331 KVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 +V++L+ ++ P MLRRLK+D KN+ PK E ++ VELT+IQ +YYRA+L KN+ L G Sbjct: 1174 QVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG 1233 Query: 1511 KGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE----------SGSPEFLHEMRIKASAKLA 1660 +LLN +M+LRK CNHPYLI G E + + SP+F + I+A+ KL Sbjct: 1234 GQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLV 1293 Query: 1661 LLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITR 1840 L+ +L L + GHRVLIFSQM + LDILEDYL P +ER+DG V RQAAI R Sbjct: 1294 LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLRQAAIDR 1351 Query: 1841 FNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLV 2017 F++ D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA R HRIGQS + + Sbjct: 1352 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKI 1411 Query: 2018 YRLVVRASVEERILQLAKKKLMLDQLFVNKSE------------SQKEVEDIIRWGTEEL 2161 YRL+ R S E + A KL LD+ + S+KE+ED++R G Sbjct: 1412 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGA 1471 Query: 2162 FRNNDEVNGKDNDEASD 2212 + ++ K +E D Sbjct: 1472 LMDEEDEGSKFCEEDID 1488
>Q06A37:CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 - Gallus gallus (Chicken)| Length = 3011 Score = 454 bits (1167), Expect = e-126 Identities = 280/737 (37%), Positives = 408/737 (55%), Gaps = 38/737 (5%) Frame = +2 Query: 116 EAVSDVPAAGTSEKGDIKLPLSEVDATVHTKQELTPESKVYGNINEIAGNGHDDTAYEFL 295 E D AAG + SE + + + + ++ + NG + EF Sbjct: 771 EEADDADAAGRDSPSNTSQ--SEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEIEEFY 828 Query: 296 VKWAGKSNIHNSWISESELRT--LAKRKLENYKAKYGMG-LINICKDQWCQPQ-----RV 451 VK+ S +H W S EL ++K++ +KAK G ++ D+ P R+ Sbjct: 829 VKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEIDRI 888 Query: 452 IALRVSLDE----VEEALIKWYGLPYDECTWER---LDEPIMLKYVHLVTQFKNFECQAL 610 + S D+ V L+KW LPY++ TWE +D+ + ++ L++ + E + + Sbjct: 889 LDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMS--REPEMERV 946 Query: 611 DRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMG 790 +R + + + +E L +QLE +NWL W+ ++N ILADEMG Sbjct: 947 ERPPADDWKKSESSREYK---------NNNKLREYQLEGVNWLLFNWYNTRNCILADEMG 997 Query: 791 LGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARS 970 LGKT+ + FL + + I+ P LV+ PLST+PNW EF +W LNVV YHGS +R Sbjct: 998 LGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRR 1055 Query: 971 AIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXX 1150 I+ YE + D Q K S+KF+ ++TT+EM+L D LR++PW +++DE HR Sbjct: 1056 TIQLYEMYFKDP-QGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNR 1114 Query: 1151 XXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAE 1330 +H+VLLTGTPLQN + E+++LL+FL+P FPS +F ++F +L T E Sbjct: 1115 NCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEE 1174 Query: 1331 KVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 +V++L+ ++ P MLRRLK+D KN+ PK E ++ VELT+IQ +YYRA+L KN+ L G Sbjct: 1175 QVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGG 1234 Query: 1511 KGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE----------SGSPEFLHEMRIKASAKLA 1660 +LLN +M+LRK CNHPYLI G E + + SP+F + I+A+ KL Sbjct: 1235 GQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLV 1294 Query: 1661 LLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITR 1840 L+ +L L + GHRVLIFSQM + LDILEDYL P +ER+DG V RQAAI R Sbjct: 1295 LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLRQAAIDR 1352 Query: 1841 FNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLV 2017 F++ D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA R HRIGQS + + Sbjct: 1353 FSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKI 1412 Query: 2018 YRLVVRASVEERILQLAKKKLMLDQLFVNKSE------------SQKEVEDIIRWGTEEL 2161 YRL+ R S E + A KL LD+ + S+KE+ED++R G Sbjct: 1413 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGA 1472 Query: 2162 FRNNDEVNGKDNDEASD 2212 + ++ K +E D Sbjct: 1473 LMDEEDEGSKFCEEDID 1489
>P32657:CHD1_YEAST Chromo domain protein 1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1468 Score = 452 bits (1163), Expect = e-126 Identities = 278/699 (39%), Positives = 395/699 (56%), Gaps = 49/699 (7%) Frame = +2 Query: 284 YEFLVKWAGKSNIHNSWIS-ESELRTLAKRKLENYKAKYGMGLINICKDQWCQ------- 439 YEFL+KW +S++HN+W + ES + ++L+NY ++ + + D + Sbjct: 211 YEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEIM 270 Query: 440 ----------------PQRVI-ALRVSLDEVE---EALIKWYGLPYDECTWERLDEPIML 559 P+R+I + R SL++ + L+KW L YDE TWE + + L Sbjct: 271 DMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVKL 330 Query: 560 KYVHLVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWL 739 V F+N E + N + R R E L QP +KGG L QL +NW+ Sbjct: 331 A-PEQVKHFQNRENSKILPQYSSNYTSQRPRFEK--LSVQPPFIKGGELRDFQLTGINWM 387 Query: 740 RKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASW 919 W K N ILADEMGLGKTV AF+S L + N P +++VPLSTMP W+ F W Sbjct: 388 AFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKW 447 Query: 920 APHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRS 1099 AP LN + Y G+ ++R IR+YE++ K KK+ KFNVLLTTYE +L D L S Sbjct: 448 APDLNCICYMGNQKSRDTIREYEFYTNPRA---KGKKTMKFNVLLTTYEYILKDRAELGS 504 Query: 1100 VPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 1279 + W+ + VDE HR +R+L+TGTPLQNNI E+ L+NFL P F Sbjct: 505 IKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRF 564 Query: 1280 PSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAE 1459 + + + E + +L + + P +LRRLKKD K++P KTER++ VEL+ +Q E Sbjct: 565 TIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTE 624 Query: 1460 YYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEP----ESGSPEFLH 1627 YY+ +LTKNY L KGG H SLLNI+ +L+K NHPYL E + G + Sbjct: 625 YYKNILTKNYSALTAGAKGG-HFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 1628 EMRIK----ASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERV 1795 E ++ +S K+ LL +L L DGHRVLIFSQM ++LDIL DYL+++ F+R+ Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK--GINFQRL 741 Query: 1796 DGSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1972 DG+V A+R+ +I FN D FVFLLSTR+ GLGINL TADTV+I+DSD+NP AD+QA Sbjct: 742 DGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQA 801 Query: 1973 MNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSE-S 2116 M RAHRIGQ N ++VYRLV + +VEE +L+ A+KK++L+ ++ K+E + Sbjct: 802 MARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEPN 861 Query: 2117 QKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSD 2233 E+ I+++G +F D ++ D + D Sbjct: 862 AGELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAED 900
>A2AJK6:CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 - Mus musculus (Mouse)| Length = 2986 Score = 449 bits (1155), Expect = e-125 Identities = 276/737 (37%), Positives = 407/737 (55%), Gaps = 38/737 (5%) Frame = +2 Query: 116 EAVSDVPAAGTSEKGDIKLPLSEVDATVHTKQELTPESKVYGNINEIAGNGHDDTAYEFL 295 E D AAG + SE +V + + + + + +G + EF Sbjct: 760 EEADDADAAGRDSPSNTSQ--SEQQESVDAEGPVVEKIMSSRLVKKQKESGEEVEVEEFY 817 Query: 296 VKWAGKSNIHNSWISESELRT--LAKRKLENYKAKYGMGLI------NICKDQWCQPQRV 451 VK+ S +H W S +L ++K++ +K+K G ++ + + R+ Sbjct: 818 VKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVDRI 877 Query: 452 IALRVSLDEVEEA----LIKWYGLPYDECTWER---LDEPIMLKYVHLVTQFKNFECQAL 610 + S D+ E L+KW LPY++ TWE +D+ + ++ L++ + E + + Sbjct: 878 MDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELKQDIDQTKIEEFEKLMS--REPETERV 935 Query: 611 DRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMG 790 +R + + + +E L +QLE +NWL W+ +N ILADEMG Sbjct: 936 ERPPADDWKKSESSREYK---------NNNKLREYQLEGVNWLLFNWYNMRNCILADEMG 986 Query: 791 LGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARS 970 LGKT+ + FL + + I+ P LV+ PLST+PNW EF +W LNVV YHGS +R Sbjct: 987 LGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRR 1044 Query: 971 AIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXX 1150 I+ YE + D Q K S+KF+ ++TT+EM+L D LR++PW +++DE HR Sbjct: 1045 TIQLYEMYFKDP-QGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNR 1103 Query: 1151 XXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAE 1330 +H+VLLTGTPLQN + E+++LL+FL+P+ FPS +F ++F +L T E Sbjct: 1104 NCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEE 1163 Query: 1331 KVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 +V++L+ ++ P MLRRLK+D KN+ PK E ++ VELT+IQ +YYRA+L KN+ L G Sbjct: 1164 QVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGG 1223 Query: 1511 KGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE----------SGSPEFLHEMRIKASAKLA 1660 +LLN +M+LRK CNHPYLI G E + + SP+F + I+A+ KL Sbjct: 1224 GQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLV 1283 Query: 1661 LLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITR 1840 L+ +L L + GHRVLIFSQM + LDILEDYL P +ER+DG V RQAAI R Sbjct: 1284 LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLRQAAIDR 1341 Query: 1841 FNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLV 2017 F++ D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA R HRIGQS + + Sbjct: 1342 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKI 1401 Query: 2018 YRLVVRASVEERILQLAKKKLMLDQLFVNKSE------------SQKEVEDIIRWGTEEL 2161 YRL+ R S E + A KL LD+ + S+KE+ED++R G Sbjct: 1402 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGA 1461 Query: 2162 FRNNDEVNGKDNDEASD 2212 + ++ K +E D Sbjct: 1462 LMDEEDEGSKFCEEDID 1478
>O14647:CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 - Homo sapiens (Human)| Length = 1828 Score = 446 bits (1146), Expect = e-124 Identities = 274/709 (38%), Positives = 401/709 (56%), Gaps = 66/709 (9%) Frame = +2 Query: 272 DDTAYEFLVKWAGKSNIHNSWISESEL---RTLAKRKLENYKAKYG-------------- 400 D+ ++L+KW G S IH++W SE L + +KLEN+K K Sbjct: 301 DEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDV 360 Query: 401 ------MGLINICKDQWCQPQRVIALRVSLDEV-----------------EEALIKWYGL 511 L + Q+ +RVIA++ S + E L KW GL Sbjct: 361 EYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGL 420 Query: 512 PYDECTWERLDEPIM-LKYVHLVTQF--KNFECQALDRDVRGNCANARNRQELTVLIQQP 682 PY EC+WE DE ++ K+ + + F +N R+ C + R L +QP Sbjct: 421 PYSECSWE--DEALIGKKFQNCIDSFHSRNNSKTIPTRE----CKALKQRPRFVALKKQP 474 Query: 683 KELKGGMLF--PHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINL 856 L G L +QLE LNWL W K+ +VILADEMGLGKT+ +FLS L + ++ Sbjct: 475 AYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYG 534 Query: 857 PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSH 1036 P L++VPLST+ +W EF WAP +NVV Y G +R+ IR+YEW I K Sbjct: 535 PFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRL 587 Query: 1037 KFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGT 1216 KFN L+TTYE++L D T L S+ W L VDE HR HR+L+TGT Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647 Query: 1217 PLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAM 1396 PLQN++ E+++LL+F+ P F FEE + + L K++ P +LRR+KKD Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVE 706 Query: 1397 KNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHP 1576 K++P K E+++ VE++++Q +YY+ +LT+NY+ L G G+ LNIVM+L+K CNH Sbjct: 707 KSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAK-GTRGSTSGFLNIVMELKKCCNHC 765 Query: 1577 YLI-PGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILED 1753 YLI P E E + + + I++S KL LL +L L G+RVLIFSQM ++LDIL + Sbjct: 766 YLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAE 825 Query: 1754 YLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVI 1930 YLT++ P F+R+DGS+ R+ A+ FN D + F FLLSTR+ GLGINLA+ADTV+ Sbjct: 826 YLTIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVV 883 Query: 1931 IYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 2110 I+DSD+NP D+QA RAHRIGQ ++ +YRLV + +VEE I++ AKKK++LD L + + Sbjct: 884 IFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 Query: 2111 E-------------------SQKEVEDIIRWGTEELFRNNDEVNGKDND 2200 + +++E+ I+++G E+LF+ E+ G++++ Sbjct: 944 DTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFK---ELEGEESE 989
>O14139:HRP3_SCHPO Chromodomain helicase hrp3 - Schizosaccharomyces pombe (Fission| yeast) Length = 1388 Score = 434 bits (1117), Expect = e-121 Identities = 273/716 (38%), Positives = 400/716 (55%), Gaps = 67/716 (9%) Frame = +2 Query: 266 GHDDTA----YEFLVKWAGKSNIHNSWISESELRTL-AKRKLENY--------------- 385 GHD + YEFL+KW S++H +W + + + +K++N+ Sbjct: 204 GHDGSTPSEDYEFLIKWVNFSHLHCTWEPYNNISMIRGSKKVDNHIKQVILLDREIREDP 263 Query: 386 -KAKYGMGLINICKD-------QWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWER- 538 + + ++I K+ ++ Q R++A ++ D E L+KW L YD CTWE Sbjct: 264 TTTREDIEAMDIEKERKRENYEEYKQVDRIVAKHLNSDGSVEYLVKWKQLLYDFCTWEAS 323 Query: 539 -LDEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPKELKGGMLFPH 715 + EPI + F+ E AL N N+R + L QQP + GG L Sbjct: 324 SIIEPIAATEIQA---FQEREESALSPSRGTNYGNSRPKYRK--LEQQPSYITGGELRDF 378 Query: 716 QLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPN 895 QL +NW+ W K++N ILADEMGLGKTV AFLS L + + P LV+VPLST+P Sbjct: 379 QLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPA 438 Query: 896 WMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVL 1075 W A WA +N + Y G+ +R IR YE++ +I KFN+LLTTYE VL Sbjct: 439 WQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKI-------KFNLLLTTYEYVL 491 Query: 1076 VDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLL 1255 D + L ++ W+ + +DE HR +R+L+TGTPLQNNI E+ L+ Sbjct: 492 KDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALV 551 Query: 1256 NFLQPASFPSLASFEEKFNELATAEKVE----ELKKLVAPHMLRRLKKDAMKNIPPKTER 1423 +FL P F E+ N A E+ E L++ + P++LRRLKKD K++P K+ER Sbjct: 552 DFLMPGKF----EIREEINLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSER 607 Query: 1424 MVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE 1603 ++ VEL+ +Q +Y+ +LT+NY+VL + G+ SLLNIV++L+K NHPYL G E Sbjct: 608 ILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYLFDGVEES 667 Query: 1604 -------SGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLT 1762 G + + + I S K+ LL +L L DGHRVLIFSQM ++LDIL DYL+ Sbjct: 668 WMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLS 727 Query: 1763 LEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVIIYD 1939 L P +R+DG+V A R+ +I FN + FVFLLSTR+ GLGINL TADTVII+D Sbjct: 728 LRGYPH--QRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFD 785 Query: 1940 SDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 2101 SD+NP AD+QAM RAHRIGQ N ++VYRL+ + ++EE +L+ A++K++L+ + Sbjct: 786 SDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTD 845 Query: 2102 ------NKSESQKEVEDIIRWGTEELFR-----------NNDEV--NGKDNDEASD 2212 N S +E+ I+++G +F+ N DE+ + +D+D ++D Sbjct: 846 KQKNSKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEILEHAEDHDTSND 901
>Q9HCK8:CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 - Homo sapiens (Human)| Length = 2302 Score = 428 bits (1100), Expect = e-119 Identities = 269/691 (38%), Positives = 389/691 (56%), Gaps = 41/691 (5%) Frame = +2 Query: 263 NGHDDTAYEFLVKWAGKSNIHNSW--ISESELRTLAKRKLENYKAKYGMGLINICKDQ-- 430 +G A EF VK+ S +H W IS+ E +KL+ +K K +D+ Sbjct: 380 SGQYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEP 439 Query: 431 ----WCQPQRVIALRVSLDE-----VEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQ 583 + + R++ S+D+ V L+KW LPY++ TWE ++ K + + Sbjct: 440 FNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGK----IRE 495 Query: 584 FKNFECQALD-RDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKS 760 FK + + + + V A+A + EL+ + +L+ +QLE +NWL W+ Sbjct: 496 FKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLR-----EYQLEGVNWLLFNWYNR 550 Query: 761 KNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVV 940 +N ILADEMGLGKT+ + AFL + I+ P LV+ PLST+ NW EF +W +N + Sbjct: 551 QNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 608 Query: 941 EYHGSARARSAIRQYEWHEGDATQIGKS-KKSHKFNVLLTTYEMVLVDATYLRSVPWEVL 1117 YHGS +R I+QYE + D+ G+ ++KF+ L+TT+EM+L D LR + W + Sbjct: 609 VYHGSLASRQMIQQYEMYCKDSR--GRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 666 Query: 1118 IVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF 1297 I+DE HR +H+VLLTGTPLQN + E+++LL+FL+P+ FPS + F Sbjct: 667 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 726 Query: 1298 EEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAML 1477 + F +L T E+V++L+ ++ P MLRRLK+D KN+ PK E ++ VELT+IQ +YYRA+L Sbjct: 727 LKNFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAIL 786 Query: 1478 TKNYQVLRNTGKGGAHQS---LLNIVMQLRKVCNHPYLIPGTEPESGSP----------E 1618 KN+ L KG H + LLN +M+LRK CNHPYLI G E + + + Sbjct: 787 EKNFSFL---SKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHD 843 Query: 1619 FLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVD 1798 F + ++++ KL L+ +L L + GH+VLIFSQM + LDILEDYL +ER+D Sbjct: 844 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQR--RYLYERID 901 Query: 1799 GSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 G V RQAAI RF++ D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA Sbjct: 902 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 961 Query: 1976 NRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE------------SQ 2119 R HRIGQS + VYRL+ R S E + A KL LD+ + S+ Sbjct: 962 ARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSK 1021 Query: 2120 KEVEDIIRWGTEELFRNNDEVNGKDNDEASD 2212 KE+ED++R G D+ K +E D Sbjct: 1022 KEIEDLLRKGAYAAIMEEDDEGSKFCEEDID 1052
>Q8TD26:CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 - Homo sapiens (Human)| Length = 2715 Score = 427 bits (1097), Expect = e-118 Identities = 262/677 (38%), Positives = 379/677 (55%), Gaps = 36/677 (5%) Frame = +2 Query: 290 FLVKWAGKSNIHNSWISESELRTLAK--RKLENYKAKYG-MGLI------NICKDQWCQP 442 F VK+ S +H W + EL + +K++ ++ K M I ++ + + Sbjct: 318 FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377 Query: 443 QRVIALRVSLD-----EVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQFKNFECQA 607 R++ + + D EV L+KW LPY+E TWE ++ K V +F++ + Sbjct: 378 DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK----VKEFESLQVLP 433 Query: 608 LDRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEM 787 + V +++ + E + + +L+ +QLE +NWL W+ KN ILADEM Sbjct: 434 EIKHVERPASDSWQKLEKSREYKNSNQLR-----EYQLEGMNWLLFNWYNRKNCILADEM 488 Query: 788 GLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARAR 967 GLGKT+ + FLS + I+ P L++ PLST+ NW EF +W +N + YHGS +R Sbjct: 489 GLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISR 546 Query: 968 SAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXX 1147 I+QYE DA Q KF+V++TT+EM+L D L+ + W +I+DE HR Sbjct: 547 QMIQQYEMVYRDA-QGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKN 605 Query: 1148 XXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATA 1327 +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS +F E+F +L T Sbjct: 606 RNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTE 665 Query: 1328 EKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT 1507 E+V++L+ ++ P MLRRLK D KN+ PK E ++ VELT+IQ +YYRA+L KN+ L Sbjct: 666 EQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKG 725 Query: 1508 GKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE----------SGSPEFLHEMRIKASAKL 1657 +L+N +M+LRK CNHPYLI G E + +P+F + I+A+ KL Sbjct: 726 ANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKL 785 Query: 1658 ALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAIT 1837 L+ +L L + GH+VLIFSQM + LDILEDYL +ER+DG V RQAAI Sbjct: 786 VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR--RYTYERIDGRVRGNLRQAAID 843 Query: 1838 RF-NQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLL 2014 RF D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA R HRIGQS + Sbjct: 844 RFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 903 Query: 2015 VYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSESQKEVEDIIRWGTEEL 2161 VYRL+ R S E + A KL LD+ + + S+ EVED++R G Sbjct: 904 VYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGA 963 Query: 2162 FRNNDEVNGKDNDEASD 2212 + ++ K +E D Sbjct: 964 LMDEEDEGSKFCEEDID 980
>Q9US25:HRP1_SCHPO Chromodomain helicase hrp1 - Schizosaccharomyces pombe (Fission| yeast) Length = 1373 Score = 424 bits (1090), Expect = e-118 Identities = 263/734 (35%), Positives = 398/734 (54%), Gaps = 50/734 (6%) Frame = +2 Query: 182 EVDATVHTKQELTPESKVYGNINEIAGNGHDD--TAYEFLVKWAGKSNIHNSWISESELR 355 E + ++E P N + A DD ++Y++L+KW S++HN+W S L Sbjct: 194 EEEVEEQVEEEYEPIIDFVLNHRKRADAQDDDPKSSYQYLIKWQEVSHLHNTWEDYSTLS 253 Query: 356 TL-AKRKLENYKAK---YGMGLI--------------------NICKDQWCQPQRVIALR 463 ++ +K++NY + Y + N+ +++ +R++A Sbjct: 254 SVRGYKKVDNYIKQNIIYDREIREDPTTTFEDIEALDIERERKNMLFEEYKIVERIVASE 313 Query: 464 VSLDEVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQFKNFECQALDRD------VR 625 + + E +KW LPYD CTWE D + + N Q L R+ + Sbjct: 314 TNEEGKTEYFVKWRQLPYDNCTWEDADV--------IYSMAPNEVYQFLQRENSPYLPYK 365 Query: 626 GNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTV 805 G N R L +QP +KGG + QL +NW+ W +++N ILADEMGLGKTV Sbjct: 366 GVFYNTR--PPYRKLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTV 423 Query: 806 SACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQY 985 FLS L K + P L++VPLST+P W A+W P LN + Y G+ +R+ IR+Y Sbjct: 424 QTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREY 483 Query: 986 EWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXX 1165 E++ + + + KFN+LLTTYE +L D L ++ W+ L +DE HR Sbjct: 484 EFY------LSTNSRKLKFNILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLY 537 Query: 1166 XXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEEL 1345 +R+L+TGTPLQNN+ E+ +L+NFL P F + +L Sbjct: 538 ETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQPNAEQERDIRDL 597 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH 1525 ++ + P +LRRLKKD K++P K+ER++ VEL+ +Q E+Y+ +LTKNY+ L G Sbjct: 598 QERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQ 657 Query: 1526 QSLLNIVMQLRKVCNHPYLIPGT-EPESGSPEFLHEMRIKA----SAKLALLHSMLKVLH 1690 SLLNIV++L+KV NHPYL PG E + E ++ S K+ LL +L+ L Sbjct: 658 LSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLK 717 Query: 1691 SDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFV 1867 DGHRVLIFSQM ++L+IL +Y++L ++R+DG++ + R+ +I FN D FV Sbjct: 718 HDGHRVLIFSQMVRMLNILGEYMSLR--GYNYQRLDGTIPASVRRVSIDHFNAPDSPDFV 775 Query: 1868 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVE 2047 FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM RAHRIGQ N + VYR + + +VE Sbjct: 776 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 835 Query: 2048 ERILQLAKKKLMLDQLFVN-----KSESQK-------EVEDIIRWGTEELFRNNDEVNGK 2191 E IL+ A++K++L+ ++ KS++ K E+ I+++G +F+ + Sbjct: 836 EDILERARRKMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKL 895 Query: 2192 DNDEASDAKHDVSD 2233 +N D D Sbjct: 896 ENMNLDDILSHAED 909
>Q8BYH8:CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 - Mus musculus (Mouse)| Length = 2885 Score = 416 bits (1070), Expect = e-115 Identities = 260/680 (38%), Positives = 381/680 (56%), Gaps = 38/680 (5%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRT--LAKRKLENYKAKYGMG--LINICKDQWCQPQRVI 454 EF VK+ S +H W +E +L ++K++ +K + + +++ P V Sbjct: 714 EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773 Query: 455 A---LRVSLDEVEEA-------LIKWYGLPYDECTWERLDEPIMLKYVHLVTQFKNFECQ 604 L VS E ++ L+KW LPY++ TWE ++ + K + +F+ + Q Sbjct: 774 VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAK----IEEFE--QLQ 827 Query: 605 ALDRDVRGNCANARNRQELTVLIQQPKELKGG-MLFPHQLEALNWLRKCWFKSKNVILAD 781 A D R R + I+Q +E K G L +QLE LNWL W+ +N ILAD Sbjct: 828 ASRPDTRHL---DRPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILAD 884 Query: 782 EMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 961 EMGLGKT+ + FL + I P L++ PLST+ NW EF +W +NVV YHGS Sbjct: 885 EMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLI 942 Query: 962 ARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRX 1141 +R I+QYE + D+ Q + +++F ++TT+EM+L L ++ W +I+DE HR Sbjct: 943 SRQMIQQYEMYFRDS-QGRIIRGAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRL 1001 Query: 1142 XXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELA 1321 +H+VLLTGTPLQN + E+++LL+FL+P FPS ++F ++F +L Sbjct: 1002 KNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLK 1061 Query: 1322 TAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLR 1501 T E+V++L+ ++ P MLRRLK+D K + PK E ++ VELT+IQ +YYRA+L KN+ L Sbjct: 1062 TEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS 1121 Query: 1502 NTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE----------SGSPEFLHEMRIKASA 1651 +L+N +M+LRK CNHPYLI G E + + +F + I+++ Sbjct: 1122 KGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAG 1181 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L+ +L + + GH+VLIFSQM + LDILEDYL + +ER+DG V RQAA Sbjct: 1182 KLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVRGNLRQAA 1239 Query: 1832 ITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 2008 I RF++ D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA R HRIGQ+ Sbjct: 1240 IDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKA 1299 Query: 2009 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE------------SQKEVEDIIRWGT 2152 + VYRLV R S E + A KL LD+ + S+KE+ED++R G Sbjct: 1300 VKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGA 1359 Query: 2153 EELFRNNDEVNGKDNDEASD 2212 ++ K +E D Sbjct: 1360 YGAIMEEEDEGSKFCEEDID 1379
>P40201:CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 - Mus musculus (Mouse)| Length = 1711 Score = 416 bits (1069), Expect = e-115 Identities = 258/700 (36%), Positives = 386/700 (55%), Gaps = 50/700 (7%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELR---TLAKRKLENYKAK--------------------Y 397 ++L+KW G S+IHN+W +E L+ +KL+NYK K Sbjct: 315 QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374 Query: 398 GMGLINICKDQWCQPQRVIAL--RVSLDEVEEALIKWYGLPYDECTWERLDEPIMLKYVH 571 L + Q+ +R+IA + S + + KW GLPY EC+WE I K+ Sbjct: 375 QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWED-GALISKKFQT 433 Query: 572 LVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPKELKG--GM-LFPHQLEALNWLR 742 + ++ F +C + R L +QP + G G+ L +QL LNWL Sbjct: 434 CIDEY--FSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLA 491 Query: 743 KCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWA 922 W K + ILADEMGLGKT+ +FL+ L E ++ P L++VPLST+ +W E +WA Sbjct: 492 HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWA 551 Query: 923 PHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSV 1102 +N V Y G +R+ IR +EW ++ KFN+LLTTYE++L D +L + Sbjct: 552 SQMNAVVYLGDINSRNMIRTHEWMHPQTKRL-------KFNILLTTYEILLKDKAFLGGL 604 Query: 1103 PWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 1282 W + VDE HR HR+L+TGTPLQN++ E+++LL+F+ P F Sbjct: 605 NWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS 664 Query: 1283 SLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEY 1462 S FEE+ + L K + P +LRR+KKD K++P K E+++ +E++++Q +Y Sbjct: 665 SWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY 723 Query: 1463 YRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLI--PGTEPESGSPEFLHEMR 1636 Y+ +LT+NY+ L + G G+ LNI+M+L+K CNH YLI P E L + Sbjct: 724 YKWILTRNYKAL-SKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL- 781 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I++S KL LL +L L G+RVLIFSQM ++LDIL +YL P F+R+DGS+ Sbjct: 782 IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGSIKGE 839 Query: 1817 ERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1993 R+ A+ FN + + F FLLSTR+ GLGINLA+ADTV+I+DSD+NP D+QA RAHRI Sbjct: 840 LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 899 Query: 1994 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE-------------------S 2116 GQ ++ +YRLV + SVEE IL+ AKKK++LD L + + + + Sbjct: 900 GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN 959 Query: 2117 QKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDI 2236 ++E+ I+++G EELF+ + +E + D+ +I Sbjct: 960 KEELSAILKFGAEELFKE------PEGEEQEPQEMDIDEI 993
>Q3L8U1:CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 - Homo sapiens (Human)| Length = 2897 Score = 414 bits (1064), Expect = e-115 Identities = 257/680 (37%), Positives = 377/680 (55%), Gaps = 38/680 (5%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELRT--LAKRKLENYKAKYGMGLINIC-------KDQWCQ 439 EF VK+ S +H W +E +L ++K++ +K + + + Sbjct: 715 EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774 Query: 440 PQRVIALRVSLDE-----VEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQFKNFECQ 604 RV+ + D+ V L+KW LPY++ TWE ++ + K + +F+ + Q Sbjct: 775 VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAK----IEEFE--QLQ 828 Query: 605 ALDRDVRGNCANARNRQELTVLIQQPKELKGG-MLFPHQLEALNWLRKCWFKSKNVILAD 781 A D R R + I Q ++ K G L +QLE LNWL W+ +N ILAD Sbjct: 829 ASRPDTR---RLDRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILAD 885 Query: 782 EMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 961 EMGLGKT+ + FL + I P L++ PLST+ NW EF +W +NVV YHGS Sbjct: 886 EMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLI 943 Query: 962 ARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRX 1141 +R I+QYE + D+ Q + +++F ++TT+EM+L L ++ W +I+DE HR Sbjct: 944 SRQMIQQYEMYFRDS-QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRL 1002 Query: 1142 XXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELA 1321 +H+VLLTGTPLQN + E+++LL+FL+P FPS ++F ++F +L Sbjct: 1003 KNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLK 1062 Query: 1322 TAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLR 1501 T E+V++L+ ++ P MLRRLK+D K + PK E ++ VELT+IQ +YYRA+L KN+ L Sbjct: 1063 TEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS 1122 Query: 1502 NTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPE----------SGSPEFLHEMRIKASA 1651 +L+N +M+LRK CNHPYLI G E + + +F + I+++ Sbjct: 1123 KGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAG 1182 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L+ +L + + GH+VLIFSQM + LDILEDYL + +ER+DG V RQAA Sbjct: 1183 KLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVRGNLRQAA 1240 Query: 1832 ITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 2008 I RF++ D RFVFLL TR+ GLGINL ADT II+DSD+NP D+QA R HRIGQ+ Sbjct: 1241 IDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKA 1300 Query: 2009 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE------------SQKEVEDIIRWGT 2152 + VYRLV R S E + A KL LD+ + S+KE+ED++R G Sbjct: 1301 VKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGA 1360 Query: 2153 EELFRNNDEVNGKDNDEASD 2212 ++ K +E D Sbjct: 1361 YGAIMEEEDEGSKFCEEDID 1380
>O14646:CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 - Homo sapiens (Human)| Length = 1709 Score = 414 bits (1063), Expect = e-114 Identities = 258/700 (36%), Positives = 384/700 (54%), Gaps = 50/700 (7%) Frame = +2 Query: 287 EFLVKWAGKSNIHNSWISESELR---TLAKRKLENYKAK--------------------Y 397 ++L+KW G S+IHN+W +E L+ +KL+NYK K Sbjct: 317 QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376 Query: 398 GMGLINICKDQWCQPQRVIAL--RVSLDEVEEALIKWYGLPYDECTWERLDEPIMLKYVH 571 L + Q+ R+IA + S + KW GLPY EC+WE I K+ Sbjct: 377 QQELTDDLHKQYQIVGRIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED-GALISKKFQA 435 Query: 572 LVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQPKELKG--GM-LFPHQLEALNWLR 742 + ++ F +C + R L +QP + G G+ L +QL LNWL Sbjct: 436 CIDEY--FSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLA 493 Query: 743 KCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWA 922 W K + ILADEMGLGKT+ +FL+ L E ++ P L++VPLST+ +W E +WA Sbjct: 494 HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWA 553 Query: 923 PHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSV 1102 +N V Y G +R+ IR +EW ++ KFN+LLTTYE++L D +L + Sbjct: 554 SQMNAVVYLGDINSRNMIRTHEWTHHQTKRL-------KFNILLTTYEILLKDKAFLGGL 606 Query: 1103 PWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 1282 W + VDE HR HR+L+TGTPLQN++ E+++LL+F+ P F Sbjct: 607 NWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS 666 Query: 1283 SLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEY 1462 S FEE+ + L K + P +LRR+KKD K++P K E+++ +E++++Q +Y Sbjct: 667 SWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY 725 Query: 1463 YRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLI--PGTEPESGSPEFLHEMR 1636 Y+ +LT+NY+ L + G G+ LNI+M+L+K CNH YLI P E L + Sbjct: 726 YKWILTRNYKAL-SKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL- 783 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I++S KL LL +L L G+RVLIFSQM ++LDIL +YL P F+R+DGS+ Sbjct: 784 IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGSIKGE 841 Query: 1817 ERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1993 R+ A+ FN + + F FLLSTR+ GLGINLA+ADTV+I+DSD+NP D+QA RAHRI Sbjct: 842 LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 901 Query: 1994 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE-------------------S 2116 GQ ++ +YRLV + SVEE IL+ AKKK++LD L + + + + Sbjct: 902 GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN 961 Query: 2117 QKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDI 2236 ++E+ I+++G EELF+ + +E + D+ +I Sbjct: 962 KEELSAILKFGAEELFKE------PEGEEQEPQEMDIDEI 995
>Q08773:ISW2_YEAST ISWI chromatin remodeling complex ATPase ISW2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1120 Score = 367 bits (942), Expect = e-100 Identities = 225/574 (39%), Positives = 326/574 (56%), Gaps = 15/574 (2%) Frame = +2 Query: 653 QELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSL 832 QE + + P +K G L +Q++ LNWL + ILADEMGLGKT+ +FL L Sbjct: 167 QEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYL 226 Query: 833 CCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQ 1012 +I P L++VP ST+ NW EF W P++NV+ HG R+ I + E Sbjct: 227 RYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEA---- 282 Query: 1013 IGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQ 1192 +F+VL+T+YEMV+ + L+ + W+ +++DE HR + Sbjct: 283 --------RFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSK 334 Query: 1193 HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK----VEELKKLVA 1360 +R+L+TGTPLQNN+ E++ LLNFL P F F+E F + + + +++L ++ Sbjct: 335 NRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLN 394 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT-GKGGAHQSLL 1537 P +LRR+K D K++ PK E V V +T +Q ++Y+++L K+ + GK LL Sbjct: 395 PFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLL 454 Query: 1538 NIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIF 1717 NIVMQLRK CNHPYL G EP G P E I S K+ +L +LK L G RVLIF Sbjct: 455 NIVMQLRKCCNHPYLFEGAEP--GPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIF 512 Query: 1718 SQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKT-RFVFLLSTRSCG 1894 SQM++LLDILEDY F + R+DGS S ER AI +N+ + +FVFLL+TR+ G Sbjct: 513 SQMSRLLDILEDYCY--FRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGG 570 Query: 1895 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKK 2074 LGINL TADTVI++DSD+NP AD+QAM+RAHRIGQ ++ VYR V ++EE++++ A + Sbjct: 571 LGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQ 630 Query: 2075 KLMLDQLFVNKSESQK---------EVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDV 2227 KL LDQL + + +K ++ D+I++G + +F K + DA D+ Sbjct: 631 KLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMFEK------KASKVTVDA--DI 682 Query: 2228 SDIEVKHRRKTGGLGDVYEDKCIGSSTKLIWDEN 2329 DI K +KT L Y+ + K EN Sbjct: 683 DDILKKGEQKTQELNAKYQSLGLDDLQKFNGIEN 716
>Q7G8Y3:ISW2_ORYSJ Probable chromatin remodelling complex ATPase chain - Oryza sativa| subsp. japonica (Rice) Length = 1107 Score = 366 bits (939), Expect = e-100 Identities = 219/544 (40%), Positives = 319/544 (58%), Gaps = 12/544 (2%) Frame = +2 Query: 662 TVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCE 841 T L+ QP +KG M +QL LNWL + + N ILADEMGLGKT+ + L L E Sbjct: 218 TRLLSQPSCIKGKMR-DYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLH-E 275 Query: 842 FK-INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIG 1018 F+ I P +V+ P ST+ NW+ E + P L V++ G+ R+ IR+ G Sbjct: 276 FRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPG------ 329 Query: 1019 KSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR 1198 KF+V +T++EM + + T L+ W +I+DE HR +R Sbjct: 330 ------KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYR 383 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN---ELATAEKVEELKKLVAPHM 1369 +L+TGTPLQNN+ E+++LLNFL P F S +F+E F E E V++L K++ P + Sbjct: 384 LLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFL 443 Query: 1370 LRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVM 1549 LRRLK D K +PPK E ++ V ++ +Q +YYRA+L K+ +V+ GG + LLNI M Sbjct: 444 LRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVIN---AGGERKRLLNIAM 500 Query: 1550 QLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMT 1729 QLRK CNHPYL G EP G P E ++ + K+ LL +L L RVLIFSQMT Sbjct: 501 QLRKCCNHPYLFQGAEP--GPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMT 558 Query: 1730 KLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKT-RFVFLLSTRSCGLGIN 1906 +LLDILEDYL + + R+DG+ +R A+I FN+ + +FVFLLSTR+ GLGIN Sbjct: 559 RLLDILEDYLM--YRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGIN 616 Query: 1907 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLML 2086 LATAD V++YDSD+NP AD+QA +RAHRIGQ + V+R ++EE++++ A KKL L Sbjct: 617 LATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLAL 676 Query: 2087 DQLFV-------NKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIEVK 2245 D L + K+ ++ ++ ++R+G E +F + D ++ + AK + + E+ Sbjct: 677 DALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELD 736 Query: 2246 HRRK 2257 + K Sbjct: 737 AKMK 740
>Q8RWY3:ISW2_ARATH Putative chromatin remodelling complex ATPase chain - Arabidopsis| thaliana (Mouse-ear cress) Length = 1057 Score = 363 bits (932), Expect = 2e-99 Identities = 219/545 (40%), Positives = 316/545 (57%), Gaps = 13/545 (2%) Frame = +2 Query: 662 TVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCE 841 T L+ QP ++G M +QL LNWL + + N ILADEMGLGKT+ + L+ L Sbjct: 176 TRLLTQPSCIQGKMR-DYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEY 234 Query: 842 FKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGK 1021 IN P +V+ P ST+ NWM E + P L V++ G+ R IR+ D GK Sbjct: 235 RGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE------DLLVAGK 288 Query: 1022 SKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 F++ +T++EM + + T LR W +I+DE HR +R+ Sbjct: 289 ------FDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRL 342 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN---ELATAEKVEELKKLVAPHML 1372 L+TGTPLQNN+ E++ LLNFL P F S +F+E F E E V++L K++ P +L Sbjct: 343 LITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLL 402 Query: 1373 RRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQ 1552 RRLK D K +PPK E ++ V ++ +Q +YY+A+L K+ + + GG + LLNI MQ Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN---AGGERKRLLNIAMQ 459 Query: 1553 LRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTK 1732 LRK CNHPYL G EP G P + I + K+ LL +L L RVLIFSQMT+ Sbjct: 460 LRKCCNHPYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTR 517 Query: 1733 LLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKT-RFVFLLSTRSCGLGINL 1909 LLDILEDYL + + R+DG+ ER A+I +N+ + +FVFLLSTR+ GLGINL Sbjct: 518 LLDILEDYLM--YRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 575 Query: 1910 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 2089 ATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R +++EE++++ A KKL LD Sbjct: 576 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALD 635 Query: 2090 QLFV---------NKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIEV 2242 L + +KS ++ E+ ++R+G E +F + D ++ + AK + + E+ Sbjct: 636 ALVIQQGRLAEQKSKSVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAEL 695 Query: 2243 KHRRK 2257 + K Sbjct: 696 DAKMK 700
>Q6PGB8:SMCA1_MOUSE Probable global transcription activator SNF2L1 - Mus musculus (Mouse)| Length = 1046 Score = 353 bits (905), Expect = 2e-96 Identities = 211/508 (41%), Positives = 293/508 (57%), Gaps = 13/508 (2%) Frame = +2 Query: 680 PKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLP 859 P +KGG L +Q+ LNWL + N ILADEMGLGKT+ A L L I P Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238 Query: 860 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 +VLVP ST+ NWM EF W P L V+ + G R+A + E G+ Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGE------------ 286 Query: 1040 FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTP 1219 ++V +T+YEMV+ + + + W L++DE HR +R+LLTGTP Sbjct: 287 WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTP 346 Query: 1220 LQNNIGEMYNLLNFLQPASFPSLASFEEKF---NELATAEKVEELKKLVAPHMLRRLKKD 1390 LQNN+ E++ LLNFL P F S F+ F N L + VE L ++ P +LRR+K D Sbjct: 347 LQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTD 406 Query: 1391 AMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCN 1570 K++PPK E + + L+ +Q E+Y +L K+ VL ++GK + LLNI+MQLRK CN Sbjct: 407 VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR-LLNILMQLRKCCN 465 Query: 1571 HPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILE 1750 HPYL G EP G P E + S K+ L +L + G RVLIFSQMT+LLDILE Sbjct: 466 HPYLFDGAEP--GPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILE 523 Query: 1751 DYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADTV 1927 DY + + R+DG ER+ AI FN + ++F+F+LSTR+ GLGINLA+AD V Sbjct: 524 DYCM--WRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVV 581 Query: 1928 IIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 2107 I+YDSD+NP D+QAM+RAHRIGQ + V+RL+ +VEERI++ A+ KL LD + + + Sbjct: 582 ILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQ 641 Query: 2108 SE---------SQKEVEDIIRWGTEELF 2164 +++E+ +IR G +F Sbjct: 642 GRLIDQQSNKLAKEEMLQMIRHGATHVF 669
>P38144:ISW1_YEAST ISWI chromatin remodeling complex ATPase ISW1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1129 Score = 352 bits (903), Expect = 4e-96 Identities = 213/552 (38%), Positives = 313/552 (56%), Gaps = 23/552 (4%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L P+Q++ +NWL ILADEMGLGKT+ +FL L KI P LV+ P Sbjct: 194 GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAP 253 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 ST+ NW+ E W P +N G R+ + Q K F+V++ Sbjct: 254 KSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVVIA 301 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +YE+++ + + L+ + WE +I+DE HR ++R+L+TGTPLQNN+ Sbjct: 302 SYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLH 361 Query: 1238 EMYNLLNFLQPASFPSLASFEEKFNELATAEK----VEELKKLVAPHMLRRLKKDAMKNI 1405 E++ LLNFL P F F++ F+ +T E V++L ++ P +LRR+K D ++ Sbjct: 362 ELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSL 421 Query: 1406 PPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQS---LLNIVMQLRKVCNHP 1576 PK E + V ++S+Q ++Y+ +L K+ + G G+ +S LLNI+MQLRK CNHP Sbjct: 422 LPKKELNLYVGMSSMQKKWYKKILEKDLDAVN--GSNGSKESKTRLLNIMMQLRKCCNHP 479 Query: 1577 YLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDY 1756 YL G EP G P E + +AKL +L +LK L +G RVLIFSQM++LLDILEDY Sbjct: 480 YLFDGAEP--GPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDY 537 Query: 1757 LTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVII 1933 F + R+DGS + +R AI +N D +FVFLL+TR+ GLGINL +AD V++ Sbjct: 538 CY--FRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVL 595 Query: 1934 YDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 2101 YDSD+NP AD+QAM+RAHRIGQ ++ V+RLV SVEE+IL+ A +KL LDQL + Sbjct: 596 YDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNR 655 Query: 2102 -------NKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKH----DVSDIEVKH 2248 NK++S+ + +I+ G ++F++ E + D+ ++ +K Sbjct: 656 TSLKKKENKADSKDALLSMIQHGAADVFKSGTSTGSAGTPEPGSGEKGDDIDLDELLLKS 715 Query: 2249 RRKTGGLGDVYE 2284 KT L YE Sbjct: 716 ENKTKSLNAKYE 727
>P28370:SMCA1_HUMAN Probable global transcription activator SNF2L1 - Homo sapiens (Human)| Length = 1054 Score = 348 bits (893), Expect = 6e-95 Identities = 220/559 (39%), Positives = 311/559 (55%), Gaps = 27/559 (4%) Frame = +2 Query: 680 PKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLP 859 P +KGG L +Q+ LNWL + N ILADEMGLGKT+ A L L I P Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234 Query: 860 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 +VLVP ST+ NWM EF W P L V+ + G AR+A + E G+ Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGE------------ 282 Query: 1040 FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTP 1219 ++V +T+YEMV+ + + + W L++DE HR +R+LLTGTP Sbjct: 283 WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTP 342 Query: 1220 LQNNIGEMYNLLNFLQPASFPSLASFEEKF---NELATAEKVEELKKLVAPHMLRRLKKD 1390 LQNN+ E++ LLNFL P F S F+ F N L + VE L ++ P +LRR+K D Sbjct: 343 LQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTD 402 Query: 1391 AMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCN 1570 K++PPK E + + L+ +Q E+Y +L K+ VL ++GK + LLNI+MQLRK CN Sbjct: 403 VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR-LLNILMQLRKCCN 461 Query: 1571 HPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILE 1750 HPYL G EP G P E + S K+ +L +L L G RVLIFSQMT+LLDILE Sbjct: 462 HPYLFDGAEP--GPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILE 519 Query: 1751 DYLTLEFGPKAFE--RVDGSVSVAERQ------------AAITRFNQ-DKTRFVFLLSTR 1885 DY + +E R+DG ER+ AI FN + ++F+F+LSTR Sbjct: 520 DYCMW----RGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTR 575 Query: 1886 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQL 2065 + GLGINLA+AD VI+YDSD+NP D+QAM+RAHRIGQ + V+RL+ +VEERI++ Sbjct: 576 AGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVER 635 Query: 2066 AKKKLMLDQLFVNKSE---------SQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAK 2218 A+ KL LD + + + +++E+ +IR G +F + + E +D Sbjct: 636 AEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKE-------SELTD-- 686 Query: 2219 HDVSDIEVKHRRKTGGLGD 2275 D++ I + +KT + + Sbjct: 687 EDITTILERGEKKTAEMNE 705
>Q91ZW3:SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A member 5 - Mus musculus (Mouse) Length = 1051 Score = 344 bits (883), Expect = 9e-94 Identities = 209/522 (40%), Positives = 298/522 (57%), Gaps = 15/522 (2%) Frame = +2 Query: 680 PKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLP 859 P +K G L +Q+ LNWL + N ILADEMGLGKT+ + L + I P Sbjct: 171 PSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGP 230 Query: 860 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 +VLVP ST+ NWM+EF W P L V G R+A + G+ Sbjct: 231 HMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGE------------ 278 Query: 1040 FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTP 1219 ++V +T+YEM++ + + + W L++DE HR +R+LLTGTP Sbjct: 279 WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 338 Query: 1220 LQNNIGEMYNLLNFLQPASFPSLASFEEKF---NELATAEKVEELKKLVAPHMLRRLKKD 1390 LQNN+ E+++LLNFL P F S F+ F N L + VE L ++ P +LRR+K D Sbjct: 339 LQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKAD 398 Query: 1391 AMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCN 1570 K++PPK E + V L+ +Q E+Y +L K+ +L + GK + LLNI+MQLRK CN Sbjct: 399 VEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR-LLNILMQLRKCCN 457 Query: 1571 HPYLIPGTEPESGSPEFLHEMRIKA-SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDIL 1747 HPYL G EP P + +M + S K+ +L +L L G RVLIFSQMT++LDIL Sbjct: 458 HPYLFDGAEP---GPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDIL 514 Query: 1748 EDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADT 1924 EDY + + R+DG ERQ +I +N+ + T+FVF+LSTR+ GLGINLATAD Sbjct: 515 EDYCM--WRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADV 572 Query: 1925 VIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 2104 VI+YDSD+NP D+QAM+RAHRIGQ+ + V+R + +VEERI++ A+ KL LD + + Sbjct: 573 VILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 632 Query: 2105 KSE---------SQKEVEDIIRWGTEELFRNND-EVNGKDND 2200 + + E+ +IR G +F + + E+ +D D Sbjct: 633 QGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDID 674
>O60264:SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A member 5 - Homo sapiens (Human) Length = 1052 Score = 344 bits (882), Expect = 1e-93 Identities = 209/522 (40%), Positives = 298/522 (57%), Gaps = 15/522 (2%) Frame = +2 Query: 680 PKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLP 859 P +K G L +Q+ LNWL + N ILADEMGLGKT+ + L + I P Sbjct: 172 PSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGP 231 Query: 860 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 +VLVP ST+ NWM+EF W P L V G R+A + G+ Sbjct: 232 HMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGE------------ 279 Query: 1040 FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTP 1219 ++V +T+YEM++ + + + W L++DE HR +R+LLTGTP Sbjct: 280 WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 339 Query: 1220 LQNNIGEMYNLLNFLQPASFPSLASFEEKF---NELATAEKVEELKKLVAPHMLRRLKKD 1390 LQNN+ E+++LLNFL P F S F+ F N L + VE L ++ P +LRR+K D Sbjct: 340 LQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKAD 399 Query: 1391 AMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCN 1570 K++PPK E + V L+ +Q E+Y +L K+ +L + GK + LLNI+MQLRK CN Sbjct: 400 VEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR-LLNILMQLRKCCN 458 Query: 1571 HPYLIPGTEPESGSPEFLHEMRIKA-SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDIL 1747 HPYL G EP P + +M + S K+ +L +L L G RVLIFSQMT++LDIL Sbjct: 459 HPYLFDGAEP---GPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDIL 515 Query: 1748 EDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADT 1924 EDY + + R+DG ERQ +I +N+ + T+FVF+LSTR+ GLGINLATAD Sbjct: 516 EDYCM--WRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADV 573 Query: 1925 VIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 2104 VI+YDSD+NP D+QAM+RAHRIGQ+ + V+R + +VEERI++ A+ KL LD + + Sbjct: 574 VILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 633 Query: 2105 KSE---------SQKEVEDIIRWGTEELFRNND-EVNGKDND 2200 + + E+ +IR G +F + + E+ +D D Sbjct: 634 QGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDID 675
>P41877:ISW1_CAEEL Chromatin remodelling complex ATPase chain isw-1 - Caenorhabditis| elegans Length = 1009 Score = 340 bits (872), Expect = 2e-92 Identities = 206/551 (37%), Positives = 305/551 (55%), Gaps = 12/551 (2%) Frame = +2 Query: 635 ANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSAC 814 A+A +L + + P ++ G + +Q+ LNWL N ILADEMGLGKT+ Sbjct: 109 ADAIKSDDLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTI 168 Query: 815 AFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWH 994 + + + P LV+VP ST+ NW EF W P +N V G AR+ + Sbjct: 169 SMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQV------ 222 Query: 995 EGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXX 1174 + KF+V TTYEM+L T L+ + W +I+DE HR Sbjct: 223 ------LRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETV 276 Query: 1175 XXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATA---EKVEEL 1345 ++R+L+TGTPLQNN+ E++ LLNFL P F S F+ F+ A + + V+ L Sbjct: 277 RELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRL 336 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH 1525 K++ P +LRR+K D K++ PK E V V L+ +Q E+Y +L K+ ++ GK Sbjct: 337 HKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKA 396 Query: 1526 QSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHR 1705 + L+NI+M LRK NHPYL G EP G P + + S K+ +L +L G R Sbjct: 397 R-LMNILMHLRKCVNHPYLFDGAEP--GPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSR 453 Query: 1706 VLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFVFLLST 1882 VLIFSQ +++LD+LED+ + R+DGS +R AI +N D +F+F+L+T Sbjct: 454 VLIFSQFSRMLDLLEDFCWWRH--YEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTT 511 Query: 1883 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 2062 R+ GLGINLATAD VIIYDSD+NP +D+QAM+RAHRIGQ ++ V+RL+ +V+ERI++ Sbjct: 512 RAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIE 571 Query: 2063 LAKKKLMLDQLFVNK---SESQK-----EVEDIIRWGTEELFRNNDEVNGKDNDEASDAK 2218 A+ KL LD + + + SE+QK ++ +IR G E++F D D+ + K Sbjct: 572 KAEAKLRLDNIVIQQGRMSEAQKTLGKGDMISMIRHGAEQVFAAKDSTISDDDIDTILEK 631 Query: 2219 HDVSDIEVKHR 2251 +V E+ + Sbjct: 632 AEVKTAELNEK 642
>P32597:STH1_YEAST Nuclear protein STH1/NPS1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1359 Score = 340 bits (871), Expect = 2e-92 Identities = 211/543 (38%), Positives = 307/543 (56%), Gaps = 30/543 (5%) Frame = +2 Query: 674 QQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKIN 853 +QP L GG L +QL L W+ + N ILADEMGLGKT+ + + ++ L K Sbjct: 460 KQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDI 519 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 P LV+VPLST+ NW EF WAP LN + Y G+ R ++ Q++ G+ Sbjct: 520 GPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSL-QHQIRVGN---------- 568 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXX-QHRVLLT 1210 F+VLLTTYE ++ D + L W +I+DEGHR ++R++LT Sbjct: 569 --FDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILT 626 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN----ELATAEKVE-----------EL 1345 GTPLQNN+ E++ LLNF+ P F S +FE+ FN T EK+E L Sbjct: 627 GTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRL 686 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKG--- 1516 K++ P +LRRLKK+ K++P K E+++ +L+ +Q + Y+ ML N + +G Sbjct: 687 HKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATK 746 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTE----PESGSPEFLHEMRIKASAKLALLHSMLKV 1684 G + L N +MQLRK+CNHP++ E P G+ + L + + K LL +L Sbjct: 747 GGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLL----FRVAGKFELLDRVLPK 802 Query: 1685 LHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTR 1861 + GHRVL+F QMT+++DI+ED+L ++ + R+DGS ER + FN D Sbjct: 803 FKASGHRVLMFFQMTQVMDIMEDFLRMK--DLKYMRLDGSTKTEERTEMLNAFNAPDSDY 860 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 2041 F FLLSTR+ GLG+NL TADTVII+D+D+NPH D+QA +RAHRIGQ N + + RL+ S Sbjct: 861 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDS 920 Query: 2042 VEERILQLAKKKLMLD------QLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDE 2203 VEE IL+ A +KL +D F NKS ++++ + R E R++D+ D+DE Sbjct: 921 VEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDE 980 Query: 2204 ASD 2212 +D Sbjct: 981 LND 983
>P25439:BRM_DROME Homeotic gene regulator - Drosophila melanogaster (Fruit fly)| Length = 1638 Score = 338 bits (866), Expect = 8e-92 Identities = 220/602 (36%), Positives = 331/602 (54%), Gaps = 28/602 (4%) Frame = +2 Query: 668 LIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFK 847 +++Q + G L +Q++ L WL + + N ILADEMGLGKT+ + ++ L K Sbjct: 761 VVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKK 820 Query: 848 INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 + P L++VPLST+PNW+ EF WAP + VV Y GS + R ++ Sbjct: 821 VMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQN-------------QM 867 Query: 1028 KSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQ-HRVL 1204 ++ KFNVLLTTYE V+ D L + W+ +I+DEGHR +R+L Sbjct: 868 RATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLL 927 Query: 1205 LTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE--LATAEKVE-----------EL 1345 LTGTPLQN + E++ LLNFL P+ F S ++FE+ FN T EKVE L Sbjct: 928 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRL 987 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT-----G 1510 K++ P +LRRLKK+ +P K E ++ +++++Q Y+ M +K + + G Sbjct: 988 HKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHG 1047 Query: 1511 KGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEM-----RIKASAKLALLHSM 1675 KGGA ++L+N ++QLRK+CNHP++ E + H + + S K LL + Sbjct: 1048 KGGA-KALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRI 1106 Query: 1676 LKVLHSDGHRVLIFSQMTKLLDILEDYLTL-EFGPKAFERVDGSVSVAERQAAITRFN-Q 1849 L L + HRVL+F QMT+ + I+EDYL +FG + R+DG+ +R + +FN + Sbjct: 1107 LPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFG---YLRLDGTTKAEDRGELLRKFNAK 1163 Query: 1850 DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLV 2029 FVFLLSTR+ GLG+NL TADTV+I+DSD+NPH D+QA +RAHRIGQ N + V RL+ Sbjct: 1164 GSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLM 1223 Query: 2030 VRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEAS 2209 SVEERIL A+ KL +D+ + Q + D G+E ++ DN+E Sbjct: 1224 TVNSVEERILAAARYKLNMDEKVI-----QAGMFDQKSTGSERQQFLQTILHQDDNEE-- 1276 Query: 2210 DAKHDVSDIEVKHRRKTGGLGDVYEDKCIGSSTKLIWDE--NAIMRLLDRSSLPTTVAES 2383 + +++V D E+ + ++ K + + K +E RL+D S LP + + Sbjct: 1277 EEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKD 1336 Query: 2384 TD 2389 D Sbjct: 1337 DD 1338
>Q9UTN6:SNF21_SCHPO SNF2-family ATP-dependent chromatin remodeling factor snf21 -| Schizosaccharomyces pombe (Fission yeast) Length = 1199 Score = 334 bits (856), Expect = 1e-90 Identities = 206/542 (38%), Positives = 294/542 (54%), Gaps = 26/542 (4%) Frame = +2 Query: 665 VLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEF 844 V+ +QP L GG L +QL L W+ + N ILADEMGLGKT+ + ++ L + Sbjct: 404 VVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKK 463 Query: 845 KINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKS 1024 + N P LV+VPLST+ NW EF WAP + + Y G + R A+ H Sbjct: 464 RQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSN-------- 515 Query: 1025 KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXX-QHRV 1201 F VLLTTYE ++ D L + W +I+DEGHR ++R+ Sbjct: 516 -----FQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRL 570 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN------------ELATAEK---V 1336 +LTGTPLQNN+ E++ LLNF+ P F S+ SF+E FN EL E + Sbjct: 571 ILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVI 630 Query: 1337 EELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKG 1516 L K++ P +LRRLKKD +P K E+++ +++ +Q + Y M + + +G Sbjct: 631 RRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRG 690 Query: 1517 GAH-QSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHS 1693 + L N VMQL+K+CNHP++ E F ++M + S K LL +L L Sbjct: 691 KTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFR 750 Query: 1694 DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRF-VF 1870 GHR+L+F QMT++++I+EDYL + + R+DGS +R + FN +F Sbjct: 751 SGHRILMFFQMTQIMNIMEDYL--HYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLF 808 Query: 1871 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEE 2050 LLSTR+ GLG+NL TADTVII+DSD+NPH D+QA +RAHRIGQ+ + +YRL+ SVEE Sbjct: 809 LLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEE 868 Query: 2051 RILQLAKKKLMLD------QLFVNKSESQKEVEDIIR--WGTEELFRNNDEVNGKDNDEA 2206 IL A+ KL +D F NKS + +E E +R E NDE D+DE Sbjct: 869 NILARAQYKLDIDGKVIQAGKFDNKS-TPEEREAFLRSLLENENGEEENDEKGELDDDEL 927 Query: 2207 SD 2212 ++ Sbjct: 928 NE 929
>P51531:SMCA2_HUMAN Probable global transcription activator SNF2L2 - Homo sapiens (Human)| Length = 1586 Score = 333 bits (855), Expect = 2e-90 Identities = 210/541 (38%), Positives = 300/541 (55%), Gaps = 28/541 (5%) Frame = +2 Query: 674 QQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKIN 853 +Q L G L +QL+ L W+ + + N ILADEMGLGKT+ A ++ L ++N Sbjct: 710 KQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLN 769 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGS-ARARSAIRQYEWHEGDATQIGKSKK 1030 P L++VPLST+ NW EF WAP + + Y G+ A RS + Q + Sbjct: 770 GPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQL--------------R 815 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQ-HRVLL 1207 S KFNVLLTTYE ++ D L + W+ +IVDEGHR R+LL Sbjct: 816 SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILL 875 Query: 1208 TGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE--LATAEKVE-----------ELK 1348 TGTPLQN + E++ LLNFL P F S ++FE+ FN T E+V+ L Sbjct: 876 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH 935 Query: 1349 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT-----GK 1513 K++ P +LRRLKK+ +P K E ++ +++++Q YR M K + + GK Sbjct: 936 KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGK 995 Query: 1514 GGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRI-------KASAKLALLHS 1672 GGA ++L+N +MQLRK+CNHPY+ E ES + + + +AS K LL Sbjct: 996 GGA-KTLMNTIMQLRKICNHPYMFQHIE-ESFAEHLGYSNGVINGAELYRASGKFELLDR 1053 Query: 1673 MLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQD 1852 +L L + HRVL+F QMT L+ I+EDY F + R+DG+ +R A + +FN+ Sbjct: 1054 ILPKLRATNHRVLLFCQMTSLMTIMEDYFA--FRNFLYLRLDGTTKSEDRAALLKKFNEP 1111 Query: 1853 KTR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLV 2029 ++ F+FLLSTR+ GLG+NL ADTV+I+DSD+NPH D+QA +RAHRIGQ N + V RL Sbjct: 1112 GSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLC 1171 Query: 2030 VRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEAS 2209 SVEE+IL AK KL +DQ + ++ R + ++E N ++ DE Sbjct: 1172 TVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEEN-EEEDEVP 1230 Query: 2210 D 2212 D Sbjct: 1231 D 1231
>P22082:SNF2_YEAST Transcription regulatory protein SNF2 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1703 Score = 332 bits (850), Expect = 6e-90 Identities = 218/605 (36%), Positives = 329/605 (54%), Gaps = 27/605 (4%) Frame = +2 Query: 674 QQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKIN 853 +QP L GG L +Q++ L W+ + N ILADEMGLGKT+ + L+ L I Sbjct: 757 KQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIR 816 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 P LV+VPLST+ NW +EFA WAP L + + GS R A +Q + G+ Sbjct: 817 GPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKA-KQAKIRAGE---------- 865 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXX-QHRVLLT 1210 F+V+LTT+E ++ + L V W +I+DEGHR +R++LT Sbjct: 866 --FDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILT 923 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN------------ELATAEK---VEEL 1345 GTPLQNN+ E++ LLNF+ P F S+ SF+E FN EL+ E + L Sbjct: 924 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRL 983 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVL--RNTGKGG 1519 K++ P +LRRLKKD K +P K E++V +++++Q Y+ ML + +N K Sbjct: 984 HKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMV 1043 Query: 1520 AHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDG 1699 + N +MQL+K+CNHP++ E + ++ + + K LL +L L + G Sbjct: 1044 GLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATG 1103 Query: 1700 HRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFV-FLL 1876 HRVLIF QMT+++DI+ED+L + + R+DG ER + FN + ++ F+L Sbjct: 1104 HRVLIFFQMTQIMDIMEDFL--RYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFIL 1161 Query: 1877 STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERI 2056 STR+ GLG+NL TADTVII+D+D+NPH D+QA +RAHRIGQ N + + RL+ SVEE I Sbjct: 1162 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVI 1221 Query: 2057 LQLAKKKLMLD------QLFVNKSESQKEVEDIIR--WGTEELFRNNDEVNGKDNDEASD 2212 L+ A KKL +D F NKS S+ E E ++R EE R E ++ +E D Sbjct: 1222 LERAYKKLDIDGKVIQAGKFDNKSTSE-EQEALLRSLLDAEEERRKKRESGVEEEEELKD 1280 Query: 2213 AKHDVSDIEVKHRRKTGGLGDVYEDKCIGSSTKLIWDENAIMRLLDRSSLPTTVAESTDG 2392 + ++++I ++ + L + ED+ +K + RLL++S LP + Sbjct: 1281 S--EINEILARNDEEMAVLTRMDEDR-----SKKEEELGVKSRLLEKSELPDIYSRDIGA 1333 Query: 2393 DLDND 2407 +L + Sbjct: 1334 ELKRE 1338
>P51532:SMCA4_HUMAN Probable global transcription activator SNF2L4 - Homo sapiens (Human)| Length = 1647 Score = 331 bits (849), Expect = 8e-90 Identities = 212/518 (40%), Positives = 291/518 (56%), Gaps = 35/518 (6%) Frame = +2 Query: 674 QQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKIN 853 +Q + G+L +Q++ L WL + + N ILADEMGLGKT+ A ++ L +IN Sbjct: 744 KQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRIN 803 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 P L++VPLST+ NW EF WAP + V Y GS AR A Q+ +S Sbjct: 804 GPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAF---------VPQL----RS 850 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQ-HRVLLT 1210 KFNVLLTTYE ++ D L + W+ +IVDEGHR R+LLT Sbjct: 851 GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLT 910 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE--LATAEKVE-----------ELKK 1351 GTPLQN + E++ LLNFL P F S ++FE+ FN T EKV+ L K Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHK 970 Query: 1352 LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT-----GKG 1516 ++ P +LRRLKK+ +P K E ++ +++++Q YR M K + + GKG Sbjct: 971 VLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKG 1030 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRI-------KASAKLALLHSM 1675 G ++L+N +MQLRK+CNHPY+ E ES S I +AS K LL + Sbjct: 1031 GT-KTLMNTIMQLRKICNHPYMFQHIE-ESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088 Query: 1676 LKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFE--RVDGSVSVAERQAAITRFNQ 1849 L L + H+VL+F QMT L+ I+EDY F + F+ R+DG+ +R + FN+ Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDY----FAYRGFKYLRLDGTTKAEDRGMLLKTFNE 1144 Query: 1850 DKTR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRL 2026 + F+FLLSTR+ GLG+NL +ADTVII+DSD+NPH D+QA +RAHRIGQ N + V RL Sbjct: 1145 PGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1204 Query: 2027 VVRASVEERILQLAKKKLMLDQ------LFVNKSESQK 2122 SVEE+IL AK KL +DQ +F KS S + Sbjct: 1205 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHE 1242
>Q24368:ISWI_DROME Chromatin remodelling complex ATPase chain Iswi - Drosophila| melanogaster (Fruit fly) Length = 1027 Score = 328 bits (840), Expect = 9e-89 Identities = 205/531 (38%), Positives = 297/531 (55%), Gaps = 18/531 (3%) Frame = +2 Query: 680 PKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINL- 856 P +K G + +Q+ LNW+ + N ILADEMGLGKT+ + L L FK Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLK-HFKNQAG 178 Query: 857 PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSH 1036 P +V+VP ST+ NW+ EF W P L V G R+ + G+ Sbjct: 179 PHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGE----------- 227 Query: 1037 KFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGT 1216 ++V +T+YEM + + + + W L++DE HR +R+L+TGT Sbjct: 228 -WDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGT 286 Query: 1217 PLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE---LATAEKVEELKKLVAPHMLRRLKK 1387 PLQNN+ E++ LLNFL P F S F+E FN L + L ++ P +LRRLK Sbjct: 287 PLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKA 346 Query: 1388 DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVC 1567 + K + PK E + V L+ +Q ++Y +L K+ V+ GK L NI+MQLRK Sbjct: 347 EVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKV-EKMRLQNILMQLRKCT 405 Query: 1568 NHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDIL 1747 NHPYL G EP G P + S K+A+L +L L G RVLIFSQMT++LDIL Sbjct: 406 NHPYLFDGAEP--GPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDIL 463 Query: 1748 EDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKT-RFVFLLSTRSCGLGINLATADT 1924 EDY + + R+DG +R I FN D + +F+F+LSTR+ GLGINLATAD Sbjct: 464 EDYC--HWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADV 521 Query: 1925 VIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV- 2101 VIIYDSD+NP D+QAM+RAHRIGQ ++ V+RL+ ++VEE+I++ A+ KL LD++ + Sbjct: 522 VIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQ 581 Query: 2102 ------NKSE--SQKEVEDIIRWGTEELFRNND-EVNGKDND---EASDAK 2218 N+S ++ E+ +IIR+G ++F + + ++ +D D E +AK Sbjct: 582 GGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAK 632
>O94421:SNF22_SCHPO SNF2-family ATP-dependent chromatin remodeling factor snf22 -| Schizosaccharomyces pombe (Fission yeast) Length = 1680 Score = 325 bits (834), Expect = 4e-88 Identities = 190/492 (38%), Positives = 286/492 (58%), Gaps = 19/492 (3%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 ++QPK GG L +QL+ L W+ + + N ILADEMGLGKT+ AF++ L + Sbjct: 858 VEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQ 917 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P L++VPLST+ NW+ EF WAP + + Y G + R ++ +QI + Sbjct: 918 QGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQ---------SQI----R 964 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXX-QHRVLL 1207 S FNVLLTT+E ++ D L + W +I+DEGHR Q+R++L Sbjct: 965 SSNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLIL 1024 Query: 1208 TGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN----------ELATAEK-----VEE 1342 TGTPLQNN+ E++ LLNF+ P F S+ SF+E FN ++ E+ ++ Sbjct: 1025 TGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKR 1084 Query: 1343 LKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGA 1522 L K++ P + RRLKKD K +P K E+++ L+ +Q + Y+ M K + +L G+ G Sbjct: 1085 LHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQM--KKHGMLFVDGEKGK 1142 Query: 1523 H--QSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSD 1696 + L N VMQL+K+CNHP++ E ++ +A+ K LL +L L Sbjct: 1143 TGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLT 1202 Query: 1697 GHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFL 1873 GH+ L+F QMT+++ I+EDYL + + R+DGS +R + + +FN K+ ++F+ Sbjct: 1203 GHKTLMFFQMTQIMTIMEDYLRSKNWK--YLRLDGSTKSDDRCSLLAQFNDPKSDVYIFM 1260 Query: 1874 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 2053 LSTR+ GLG+NL TADTVII+D+D+NPH D+QA +RAHRIGQ+ + + RL+ S+EE Sbjct: 1261 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEEN 1320 Query: 2054 ILQLAKKKLMLD 2089 IL A+ KL LD Sbjct: 1321 ILSRAQYKLDLD 1332
>Q60848:HELLS_MOUSE Lymphocyte-specific helicase - Mus musculus (Mouse)| Length = 821 Score = 313 bits (801), Expect = 3e-84 Identities = 220/636 (34%), Positives = 313/636 (49%), Gaps = 70/636 (11%) Frame = +2 Query: 665 VLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEF 844 V QQPK GG++ +Q+E + WLR W N ILADEMGLGKTV A ++ L + Sbjct: 193 VPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQR 251 Query: 845 KINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKS 1024 + P LV PLST+PNWMAEF + P + + YHG+ R + + QI Sbjct: 252 GVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHP- 310 Query: 1025 KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVL 1204 V++T++E+ + D L+ W+ LIVDEGHR +++L Sbjct: 311 -------VVVTSFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLL 363 Query: 1205 LTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEE-------------L 1345 LTGTPLQNN+ E+++LLNFL P F L SFE F+ + +E E+ L Sbjct: 364 LTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHML 423 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMV------------------------------PV 1435 +++ P +LRRLK D +PPK E +V V Sbjct: 424 HQILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETV 483 Query: 1436 ELTSIQAEYYRAMLTKNYQVL---------------------RNTGKGG------AHQSL 1534 EL+ R+ + NY L R +G + L Sbjct: 484 ELSPTGRPKRRSRKSINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKL 543 Query: 1535 LNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLI 1714 NI+M LRK CNHPY+I + E + S K +L ML L GH+VL+ Sbjct: 544 RNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLV 603 Query: 1715 FSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCG 1894 FSQMT +LDIL DY L F R+DGS+S +ER+ I FN D F+FL+STR+ G Sbjct: 604 FSQMTSMLDILMDYCHLR--NFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGG 661 Query: 1895 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKK 2074 LGINL ADTVIIYDSD+NP +D+QA +R HRIGQ+ ++VYRLV +++++I++ A Sbjct: 662 LGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAA 721 Query: 2075 KLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIEVKHRR 2254 K L++L ++K+ + G L ++ + ++ K+ E ++ Sbjct: 722 KRKLEKLIIHKNH--------FKGGQSGLSQSKNFLDAKELMELLKSRD----------- 762 Query: 2255 KTGGLGDVYEDKCIGSSTKLIWDENAIMRLLDRSSL 2362 YE + GS K+I DE+ + LLDRS L Sbjct: 763 --------YEREVKGSREKVISDED-LELLLDRSDL 789
>Q9NRZ9:HELLS_HUMAN Lymphoid-specific helicase - Homo sapiens (Human)| Length = 838 Score = 279 bits (714), Expect = 3e-74 Identities = 190/559 (33%), Positives = 278/559 (49%), Gaps = 77/559 (13%) Frame = +2 Query: 665 VLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEF 844 V QQPK GG++ +Q+E + WLR W N ILADEMGLGKTV C +L + Sbjct: 210 VPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQ-CIATIALMIQR 268 Query: 845 KINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKS 1024 + P LV PLST+PNWMAEF + P + + YHG+ R + + + QI Sbjct: 269 GVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQI--- 325 Query: 1025 KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVL 1204 V++T++E+ + D L+ W+ LIVDEGHR +++L Sbjct: 326 -----HPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLL 380 Query: 1205 LTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEE-------------L 1345 LTGTPLQNN+ E+++LLNFL P F L SFE F+ + +E E+ L Sbjct: 381 LTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHML 440 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVL--------- 1498 +++ P +LRRLK D +PPK E +V L+ Q +Y A++ + + Sbjct: 441 HQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETI 500 Query: 1499 ---------RNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRI--KA 1645 R T K + + + +L K LI +PE + E+ I ++ Sbjct: 501 ELSPTGRPKRRTRKSINYSKIDDFPNELEK------LISQIQPEVDRERAVVEVNIPVES 554 Query: 1646 SAKLALLHSMLKVLHSDGHRVLI------------------------------------- 1714 L L + M+ + H LI Sbjct: 555 EVNLKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKR 614 Query: 1715 ------FSQMTKLLDILEDYLTL-EFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFL 1873 FSQMT +LDIL DY L +F F R+DGS+S +ER+ + FN D F+FL Sbjct: 615 GHKVLLFSQMTSMLDILMDYCHLRDFN---FSRLDGSMSYSEREKNMHSFNTDPEVFIFL 671 Query: 1874 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 2053 +STR+ GLGINL ADTVIIYDSD+NP +D+QA +R HRIGQ+ ++VYRLV +++++ Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731 Query: 2054 ILQLAKKKLMLDQLFVNKS 2110 I++ A K L++L ++K+ Sbjct: 732 IVERAAAKRKLEKLIIHKN 750
>Q04692:SMRCD_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A containing DEAD/H box 1 - Mus musculus (Mouse) Length = 1021 Score = 260 bits (664), Expect = 2e-68 Identities = 181/545 (33%), Positives = 269/545 (49%), Gaps = 62/545 (11%) Frame = +2 Query: 674 QQPKELKGGM-LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 +QP L + L P+Q LNWL N ILADEMGLGKT+ A AFL+ L E Sbjct: 481 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK 540 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P L++VP ST+ NW+ E W P LNV+ Y+GS R IR + H K Sbjct: 541 G-PHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIR-FNIH----------NK 588 Query: 1031 SHKFNVLLTTYEMVLV---DATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 +NV++TTY + D + R + I DEGH ++R+ Sbjct: 589 YEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRL 648 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLAS-----FEEKF-----NELATAEKVEELKK 1351 LLTGTP+QNN+ E+ +LLNF+ P F S S F K + E++ K+ Sbjct: 649 LLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQ 708 Query: 1352 LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQS 1531 ++ P +LRR+K++ +K +PPK +R+ ++ Q + Y + + + + N K + Sbjct: 709 IIKPFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEK---NTE 765 Query: 1532 LLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMR------------------------- 1636 + N++MQLRK+ NHP L + +PE L EM Sbjct: 766 MCNVMMQLRKMANHPLL----HRQYYTPEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMT 821 Query: 1637 -----------------------IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDIL 1747 I S K L +L L G RV++FSQ T +LDIL Sbjct: 822 DFELHVLCKQYQHINSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDIL 881 Query: 1748 EDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTV 1927 E + L+ + R+DG ++ER I FN D FVFLLST++ GLGINL +A+ V Sbjct: 882 E--VLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVV 939 Query: 1928 IIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 2107 I++D D NP+ D QA +R HR+GQ+ +LV +L+ + ++EE +L++ ++KL L+Q Sbjct: 940 ILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTV 999 Query: 2108 SESQK 2122 E+ + Sbjct: 1000 DEADE 1004
>Q9H4L7:SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A containing DEAD/H box 1 - Homo sapiens (Human) Length = 1026 Score = 259 bits (663), Expect = 3e-68 Identities = 179/532 (33%), Positives = 268/532 (50%), Gaps = 58/532 (10%) Frame = +2 Query: 671 IQQPKELKGGM-LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFK 847 I+QP L + L P+Q LNWL N ILADEMGLGKT+ A AFL+ L E Sbjct: 485 IEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544 Query: 848 INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 N P L++VP ST+ NW+ E W P L V+ Y+GS R IR + H Sbjct: 545 -NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-FNIH----------S 592 Query: 1028 KSHKFNVLLTTYEMVLV---DATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR 1198 + +NV++TTY + D + R + I DEGH +R Sbjct: 593 RYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNR 652 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLAS-----FEEKF-----NELATAEKVEELK 1348 +LLTGTP+QNN+ E+ +LLNF+ P F S S F K + E++ K Sbjct: 653 LLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAK 712 Query: 1349 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQ 1528 +++ P +LRR+K++ +K +PPK +R+ ++ Q + Y + + + + N K + Sbjct: 713 QIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEK---NT 769 Query: 1529 SLLNIVMQLRKVCNHPYL---------------IPGTEPE--SGSPEFLHEMR------- 1636 + N++MQLRK+ NHP L + EP +P+ + E Sbjct: 770 EMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFE 829 Query: 1637 --------------------IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDY 1756 I S K +L +L L G RV++FSQ T +LDILE Sbjct: 830 LHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILE-- 887 Query: 1757 LTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 + L+ + R+DG ++ER I FN D FVFLLST++ GLGINL +A+ VI++ Sbjct: 888 VLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILH 947 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQ 2092 D D NP+ D QA +R HR+GQ+ +LV +L+ + ++EE +L++ ++KL L+Q Sbjct: 948 DIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
>P40352:RAD26_YEAST DNA repair and recombination protein RAD26 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1085 Score = 245 bits (625), Expect = 7e-64 Identities = 165/576 (28%), Positives = 282/576 (48%), Gaps = 65/576 (11%) Frame = +2 Query: 701 MLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPL 880 +LF +Q + WL + + ++ I+ DEMGLGKT+ AF+++L + P L++ P Sbjct: 296 LLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPA 355 Query: 881 STMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFN----- 1045 + M W EF W P L V H ++ ++++ E D + + K F+ Sbjct: 356 TVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWK 415 Query: 1046 ---------------------------VLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXX 1144 +L+TTY + + + L V W+ ++DEGH+ Sbjct: 416 NSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIR 475 Query: 1145 XXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF----- 1309 +R++L+GTP+QNN+ E+++L +F+ P +L F+++F Sbjct: 476 NPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPIN 535 Query: 1310 -NELATAEKVE---------ELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAE 1459 A A ++ L+ L++P++LRR+K D K++P K E ++ +LT Q Sbjct: 536 IGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRS 595 Query: 1460 YYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGT----EPESGSPEFLH 1627 Y L + GK +++L + LRK+CNHP L+ P+ G P Sbjct: 596 KYLEFLHSSDLNQIQNGK----RNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDP---- 647 Query: 1628 EMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL---EFGPKAFERVD 1798 K S K+ ++ +L + H G++ L+F+Q ++LDILE++++ + + R+D Sbjct: 648 ----KRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMD 703 Query: 1799 GSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1978 G+ ++ RQ+ + RFN + VFLL+TR GLG+NL A+ +II+D D+NP D+QA Sbjct: 704 GTTNIKGRQSLVDRFNNESFD-VFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARE 762 Query: 1979 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQK-----EVEDIIR 2143 RA RIGQ + +YRL+V S+EE+I K L + + ++ E+ D+ Sbjct: 763 RAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFS 822 Query: 2144 WG------TEELFRNNDEVNGKDNDEASDAKHDVSD 2233 G TEEL N+EV K + ++K + SD Sbjct: 823 LGGENGYSTEEL---NEEVQ-KHTENLKNSKSEESD 854
>P31380:YAB9_YEAST Uncharacterized ATP-dependent helicase YAL019W - Saccharomyces| cerevisiae (Baker's yeast) Length = 1131 Score = 244 bits (623), Expect = 1e-63 Identities = 181/551 (32%), Positives = 268/551 (48%), Gaps = 78/551 (14%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPC--LVLVPLST 886 +Q +NWL + + ILAD+MGLGKT +F + L +IN P LV+VP ST Sbjct: 575 YQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLK---QINEPGPHLVVVPSST 631 Query: 887 MPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYE 1066 + NW+ EF +AP L + Y+GS + R +R + + K++V++TTY Sbjct: 632 LENWLREFQKFAPALKIEPYYGSLQEREELRDI-----------LERNAGKYDVIVTTYN 680 Query: 1067 MVL---VDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 + D ++L++ + V++ DEGH R+LLTGTPLQNN+ Sbjct: 681 LAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLK 740 Query: 1238 EMYNLLNFLQPASFPS-LASFEEKF-------------NELATAEKVEELKKLVAPHMLR 1375 E+ +LL F+ P F S SF+ F N L E + K ++ P +LR Sbjct: 741 ELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILR 800 Query: 1376 RLKKDAMKNIPPKTERMVPVELTSIQAEYY---------RAMLTKNYQVLRNTGKGGAHQ 1528 R K +K++PPK + EL +IQ + Y + K+ ++ ++ + Q Sbjct: 801 RRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQ 860 Query: 1529 --SLLNIVMQLRKVCNHPYLIPG---------------TEP---ESGSPEF--------- 1621 S N++M LRK HP L EP E+G+ E+ Sbjct: 861 SSSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIKEDMSYMT 920 Query: 1622 -------------------LHEMRIKASAKLALLHSMLKVLHSD-GHRVLIFSQMTKLLD 1741 LH S K+ L +LK + D +VLIFS T++LD Sbjct: 921 DFELHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLD 980 Query: 1742 ILEDYL-TLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATA 1918 ILE L TL++ F R+DGS V +RQ I +F +DK +F+LST++ G GINL A Sbjct: 981 ILEMVLSTLDY---KFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCA 1037 Query: 1919 DTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLF 2098 + VII+D FNPH D QA +RAHR+GQ+ + + L+ + S+EE+I QLAK KL LD Sbjct: 1038 NNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097 Query: 2099 VNKSESQKEVE 2131 +SQ +E Sbjct: 1098 SEDKKSQDVLE 1108
>Q03468:ERCC6_HUMAN DNA excision repair protein ERCC-6 - Homo sapiens (Human)| Length = 1493 Score = 239 bits (610), Expect = 4e-62 Identities = 157/485 (32%), Positives = 250/485 (51%), Gaps = 34/485 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCE----------FKIN 853 LF +Q + WL + + IL DEMGLGKT+ AFL+ L F+ Sbjct: 507 LFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGL 566 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 P +++ P + M W+ EF +W P V H + S + E D + Sbjct: 567 GPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETG---SYTHKKEKLIRDV--------A 615 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTG 1213 H +L+T+Y + + + W +I+DEGH+ HR++L+G Sbjct: 616 HCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 675 Query: 1214 TPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN--------------ELATAEKVE-ELK 1348 +P+QNN+ E+++L +F+ P +L F E+F+ ++ TA K L+ Sbjct: 676 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 735 Query: 1349 KLVAPHMLRRLKKDAMKNI--PPKTERMVPVELTSIQAEYYRAMLTKN--YQVLRNTGKG 1516 + P++LRR+K D ++ P K E+++ LT Q + Y+ + Y++L Sbjct: 736 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNG---- 791 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTEPE-SGSPEF-LHEMRI---KASAKLALLHSMLK 1681 + + ++ LRK+CNHP L G G P+ L E + K S K+ ++ S+LK Sbjct: 792 --EMQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLK 849 Query: 1682 VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR 1861 + H G RVL+FSQ ++LDILE +L + + ++DG+ ++A RQ ITR+N+D + Sbjct: 850 IWHKQGQRVLLFSQSRQMLDILEVFLRAQ--KYTYLKMDGTTTIASRQPLITRYNEDTSI 907 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 2041 FVFLL+TR GLG+NL A+ V+IYD D+NP D QA RA RIGQ ++ VYRL+ + Sbjct: 908 FVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGT 967 Query: 2042 VEERI 2056 +EE+I Sbjct: 968 IEEKI 972
>O42861:YFC1_SCHPO Uncharacterized ATP-dependent helicase C25A8.01c -| Schizosaccharomyces pombe (Fission yeast) Length = 922 Score = 231 bits (588), Expect = 1e-59 Identities = 176/545 (32%), Positives = 257/545 (47%), Gaps = 71/545 (13%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMP 892 +Q+ +NWL + ILADEMGLGKT AF S L + IN P LV+ P STM Sbjct: 390 YQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFS-LLMDKNINGPHLVIAPASTME 448 Query: 893 NWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMV 1072 NW+ EFA + P L + Y+GS R IR+ +I +K S +NV+LTTY + Sbjct: 449 NWLREFAKFCPKLKIELYYGSQVEREEIRE---------RINSNKDS--YNVMLTTYRLA 497 Query: 1073 L---VDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEM 1243 D +LR+ + V + DEGH RVLLTGTPLQNN+ E+ Sbjct: 498 ATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKEL 557 Query: 1244 YNLLNFLQPASFP-SLASFEEKF-----------NELATAEKVEELKKLVAPHMLRRLKK 1387 +LL F+ P F L S + F L + ++V K ++AP +LRR K Sbjct: 558 ISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKMMMAPFVLRRKKS 617 Query: 1388 DAMKNIPPKTERMVPVELTSIQAEYY---------RAMLTKNYQVLR---NTGKGGAHQS 1531 + +P KT + E + + Y ++L +N N + Sbjct: 618 QVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKST 677 Query: 1532 LLNIVMQLRKVCNHPYLI----------PGTEPESGSPEF-------------------L 1624 +++QLRK+ +HP L + P++ L Sbjct: 678 AGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIFEDMQYMSDIEL 737 Query: 1625 HEMRIK---------------ASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYL 1759 H + K + K+ L +L +G RV++FSQ T++LDIL+ L Sbjct: 738 HNLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQ--L 795 Query: 1760 TLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYD 1939 ++ F R DGS V RQ I +F D++ VFLLST++ G GINLA A+ VI+YD Sbjct: 796 VMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACANMVILYD 855 Query: 1940 SDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQ 2119 FNP D+QA +RAHR+GQ + VY+ VV+ ++EE I +LA K+ LD +E+ Sbjct: 856 VSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALDATLSGNAETV 915 Query: 2120 KEVED 2134 + +D Sbjct: 916 EAEDD 920
>P32333:MOT1_YEAST TATA-binding protein-associated factor MOT1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1867 Score = 228 bits (581), Expect = 9e-59 Identities = 173/596 (29%), Positives = 280/596 (46%), Gaps = 59/596 (9%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKIN-----------LP 859 +Q + +NWL + IL D+MGLGKT+ ++S K + LP Sbjct: 1275 YQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALP 1334 Query: 860 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 L++ P S +W EF +AP L VV Y G R +R Q+ + Sbjct: 1335 SLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRP---------QLSDA----- 1380 Query: 1040 FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTP 1219 ++++T+Y++ D L + ++DEGH HR++LTGTP Sbjct: 1381 -DIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTP 1439 Query: 1220 LQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK---------------VEELKKL 1354 +QNN+ E+++L +FL P + F+E+F + A + +E L K Sbjct: 1440 IQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQ 1499 Query: 1355 VAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQV----LRNTGKGGA 1522 V P MLRRLK+D + ++PPK + EL +Q + Y K V + N+ Sbjct: 1500 VLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADG 1559 Query: 1523 HQSLLNIVMQLRKVCNHPYLI--PGTEPESGSPEFLHEMRIKA-----SAKLALLHSML- 1678 Q + + +RK+CNHP L+ P + ++L + + + KL+ L ++L Sbjct: 1560 KQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLF 1619 Query: 1679 ----------KVLHSDG----------HRVLIFSQMTKLLDILEDYLTLEFGPKA-FERV 1795 K D HR LIF Q+ +LD++E+ L ++ P + R+ Sbjct: 1620 ECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRL 1679 Query: 1796 DGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 DGS+ +RQ + +FN+D + LL+T+ GLG+NL ADTVI + D+NP D+QAM Sbjct: 1680 DGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAM 1739 Query: 1976 NRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTE 2155 +RAHRIGQ + VYR++ + ++EE+I+ L K K+ + VN+ S D + Sbjct: 1740 DRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQ--LL 1797 Query: 2156 ELFRNNDEVNGKDNDEASDAKHDVSDIEVKHRRKTGGLGDVYEDKCIGSSTKLIWD 2323 +LF + D V +DN+E ++ + +TG G E +G K +WD Sbjct: 1798 DLF-DPDNVTSQDNEEKNNGDSQAAKGMEDIANETGLTGKAKE--ALG-ELKELWD 1849
>O43065:MOT1_SCHPO Probable helicase mot1 - Schizosaccharomyces pombe (Fission yeast)| Length = 1953 Score = 225 bits (573), Expect = 8e-58 Identities = 172/573 (30%), Positives = 270/573 (47%), Gaps = 72/573 (12%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSA-CAFLSSLCCEFKI----------NLP 859 +Q E +NWL + IL D+MGLGKT+ C S K+ ++P Sbjct: 1361 YQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVP 1420 Query: 860 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 L++ P + +W E +++AP L V Y G R+ IR K KKS Sbjct: 1421 SLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRS------------KMKKS-- 1466 Query: 1040 FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTP 1219 +V++T+Y++ D L + W ++DEGH HR++L+GTP Sbjct: 1467 -DVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTP 1525 Query: 1220 LQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK---------------VEELKKL 1354 +QNN+ E+++L +FL P + +F+E+F A + +E + K Sbjct: 1526 IQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQ 1585 Query: 1355 VAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAML-------------TKNYQV 1495 V P MLRRLK+D + ++PPK + +++ +Q + + T+ Q Sbjct: 1586 VLPFMLRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQG 1645 Query: 1496 LRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMR--------IKASA 1651 R AH + + +RK+CNHP LI TE + ++ +K + Sbjct: 1646 TRKKKSQKAH--IFQALQYMRKLCNHPALIL-TEKHPKRNAIVKQLAKENSGLHDLKHAP 1702 Query: 1652 KLALLHSMLK-------VLHSDG-----------HRVLIFSQMTKLLDILE-DYLTLEFG 1774 KL L +L+ ++S+G HRVLIF Q+ +LD++E D L Sbjct: 1703 KLTALGQLLRDCGLGNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMP 1762 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 + R+DGSV +RQ A+T+FN D + V LL+T GLG+NL ADTVI + D+NP Sbjct: 1763 DVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNP 1822 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK------SES 2116 D+QAM+RAHRIGQ + VYRL+ R +EE+I+ L + K+ + VN+ S Sbjct: 1823 MRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIG 1882 Query: 2117 QKEVEDIIRWGTEELFRNNDEVNGKDNDEASDA 2215 ++ D+ +E V D +E+ DA Sbjct: 1883 TDQILDLFNTTADE----QQTVQNIDKEESEDA 1911
>O14981:BTAF1_HUMAN TATA-binding protein-associated factor 172 - Homo sapiens (Human)| Length = 1849 Score = 202 bits (513), Expect = 7e-51 Identities = 152/554 (27%), Positives = 259/554 (46%), Gaps = 71/554 (12%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFK-----------INLP 859 +Q + +NWL + IL D+MGLGKT+ + L+ C + LP Sbjct: 1269 YQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLP 1328 Query: 860 CLVLVPLSTMPNWMAEFASWAP--HLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 LV+ P + +W+ E + +LN + Y G R ++ + Sbjct: 1329 SLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQH---------------QV 1373 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTG 1213 + N+++ +Y++V D + R++ + I+DEGH +R++L+G Sbjct: 1374 KRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSG 1433 Query: 1214 TPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK---------------VEELK 1348 TP+QNN+ E+++L +FL P + F ++ + A + ++ L Sbjct: 1434 TPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALH 1493 Query: 1349 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYR-----------------AML 1477 + V P +LRR+K+D ++++PPK + L+ +Q + Y A L Sbjct: 1494 RQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATL 1553 Query: 1478 TKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEF---LHEMRIKAS 1648 ++ + + G Q+L LRK+CNHP L+ + PEF ++ ++ S Sbjct: 1554 SEETEKPKLKATGHVFQAL----QYLRKLCNHPALVLTPQ----HPEFKTTAEKLAVQNS 1605 Query: 1649 AKLALLH----SMLKVLHSD------------------GHRVLIFSQMTKLLDILE-DYL 1759 + + H S LK L D HR+LIF Q+ +LDI+E D L Sbjct: 1606 SLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLL 1665 Query: 1760 TLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYD 1939 + R+DGS+ +R + ++RFN D + V LL+T GLG+NL ADTV+ + Sbjct: 1666 KPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVE 1725 Query: 1940 SDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQ 2119 D+NP D+QAM+RAHRIGQ + VYRL+ R ++EE+I+ L K K+ + +++ S Sbjct: 1726 HDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSS 1785 Query: 2120 KEVEDIIRWGTEEL 2161 + GT++L Sbjct: 1786 LQ-----SMGTDQL 1794
>Q9Y620:RA54B_HUMAN DNA repair and recombination protein RAD54B - Homo sapiens (Human)| Length = 910 Score = 199 bits (507), Expect = 4e-50 Identities = 169/564 (29%), Positives = 275/564 (48%), Gaps = 52/564 (9%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSK-----NVILADEMGLGKTVSACAFLSSLCCEFK-----IN 853 L PHQ E + +L +C + ILADEMGLGKT+ + + +L C+ + Sbjct: 296 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 355 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 L++ P S + NW EF W GS R + + ++ + KS Sbjct: 356 KKTLIVTPGSLVNNWKKEFQKWL---------GSERIKIFTVDQDH------KVEEFIKS 400 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTG 1213 ++VL+ +YEM+L ++++ +++LI DEGHR + R++LTG Sbjct: 401 IFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTG 460 Query: 1214 TPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE--------LATAEKVE-------ELK 1348 TP+QN++ E + L++F+ P SL+S+ + + E A+ E+ E EL Sbjct: 461 TPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELT 520 Query: 1349 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQ 1528 L +LRR ++ K +PPK E +V ++Q E YR +L N QV+R +G Sbjct: 521 CLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLL--NSQVVRFCLQGLLEN 578 Query: 1529 S-LLNIVMQLRKVCNHPYLIPGT--EPESGSPEFLHEMRI-------------------- 1639 S L + L+K+CNHP L+ + E E S +E + Sbjct: 579 SPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTE 638 Query: 1640 KASAKLALLHSMLKVLHS--DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSV 1813 K S KL +L +L V+H +V++ S T+ L+IL++ + A+ R+DG + Sbjct: 639 KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQE--VCKRHGYAYTRLDGQTPI 696 Query: 1814 AERQAAITRFN-QDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1990 ++RQ + FN Q + F+FLLS+++ G+G+NL +I+YD D+NP DIQAM+R R Sbjct: 697 SQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWR 756 Query: 1991 IGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRN 2170 GQ + +YRL+ ++EE+I Q K L V+ +++ + I++ EEL Sbjct: 757 DGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEH----IQFSVEEL--- 809 Query: 2171 NDEVNGKDNDEASD-AKHDVSDIE 2239 N E+SD HD+ D E Sbjct: 810 ---KNLFTLHESSDCVTHDLLDCE 830
>Q6FV37:INO80_CANGA Putative DNA helicase INO80 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 1484 Score = 196 bits (499), Expect = 3e-49 Identities = 123/345 (35%), Positives = 186/345 (53%), Gaps = 21/345 (6%) Frame = +2 Query: 611 DRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMG 790 D + N N + E+T I+QPK L L +QL+ LNWL + + N ILADEMG Sbjct: 694 DDEEEMNFQNPTSLGEIT--IEQPKML-ACTLKEYQLKGLNWLANLYDQGINGILADEMG 750 Query: 791 LGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARS 970 LGKTV + + L+ L I P LV+ P ST+ NW+ E + + P ++ Y GSA R Sbjct: 751 LGKTVQSISVLAHLAEHHNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGSANDRK 810 Query: 971 AIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXX 1150 +R++ W D + S+KS F+V++T+Y+MV+ DA+YL+ + W+ +I+DE Sbjct: 811 VLRKF-W---DRKNLRYSEKS-PFHVMITSYQMVVADASYLQKMKWQYMILDEAQAIKSS 865 Query: 1151 XXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF------- 1309 ++R+LLTGTP+QNN+ E++ LL+F+ P+ F S F E F Sbjct: 866 QSSRWKNLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFNEWFSRDIESH 925 Query: 1310 ---NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RA 1471 N +++ L ++ P MLRR+KK+ + K E V +LT Q + Y ++ Sbjct: 926 AEGNSSLNQQQLRRLHMILKPFMLRRIKKNVQSELGDKIEIDVMCDLTQRQTKLYQVLKS 985 Query: 1472 MLTKNYQVLRN--------TGKGGAHQSLLNIVMQLRKVCNHPYL 1582 ++ NY + N G G + QS++N VMQ RKVCNHP L Sbjct: 986 QMSSNYDAIENAAAEGSDIAGGGNSDQSIINAVMQFRKVCNHPDL 1030 Score = 139 bits (350), Expect = 6e-32 Identities = 74/165 (44%), Positives = 108/165 (65%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I SAKL L +L L + HRVLI+ QMTK++D++E+YLT + R+DGS + Sbjct: 1291 ITESAKLKKLDELLVELKKNDHRVLIYFQMTKMMDLMEEYLT--YRQYNHIRLDGSSKLE 1348 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 +R+ + + + F+FLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAHR+G Sbjct: 1349 DRRDLVHDWQTNPEIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1408 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVE 2131 Q+ ++ VYRL+VR ++EER+ AK+K + Q+ + ++ Sbjct: 1409 QTKQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTKDTNIQ 1453
>P41410:RAD54_SCHPO DNA repair protein rhp54 - Schizosaccharomyces pombe (Fission yeast)| Length = 852 Score = 193 bits (490), Expect = 3e-48 Identities = 162/538 (30%), Positives = 248/538 (46%), Gaps = 46/538 (8%) Frame = +2 Query: 701 MLFPHQLEALNWLRKCWFK-----SKNVILADEMGLGKTVSACAFLSSLCCEF-KINLP- 859 +L PHQ+E + +L KC + I+ADEMGLGKT+ A L +L + + P Sbjct: 263 ILRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPT 322 Query: 860 ---CLVLVPLSTMPNWMAEFASWAPHLNVVEY---HGSARARSAIRQYEWHEGDATQIGK 1021 ++ P S + NW E W + + S++ + +W Q+ + Sbjct: 323 IEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTR 382 Query: 1022 SKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 VL+ +YE + +L + +L+ DEGHR Q RV Sbjct: 383 P-------VLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRRV 435 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFE----------------EKFNELATAEK 1333 +L+GTP+QN++ E ++LLNF P S F EK E A K Sbjct: 436 ILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDA-K 494 Query: 1334 VEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNY--QVLRNT 1507 + EL K+V ++RR K +P K E +V L+ Q Y+ +T ++LR T Sbjct: 495 LAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGT 554 Query: 1508 GKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGS-----PEFL-HEMRIK-------AS 1648 G L + L+K+CNHP L+ TE G P F+ E+R + S Sbjct: 555 GS-----QPLKAIGLLKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLS 609 Query: 1649 AKLALLHSML-KVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 K+ +L ML ++ ++++ S T LD+ E L G KA R+DG+++V +RQ Sbjct: 610 GKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQ-LCRARGYKAL-RLDGTMNVNKRQ 667 Query: 1826 AAITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 2002 + FN +K FVFLLS+++ G GINL A+ +I++D D+NP AD QA+ R R GQ Sbjct: 668 RLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQK 727 Query: 2003 NRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNND 2176 VYR + ++EE+I Q K L V+ E+Q +LF+ ND Sbjct: 728 KDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD--EAQDVERHFSLDNLRQLFQLND 783
>Q9DG67:RA54B_CHICK DNA repair and recombination protein RAD54B - Gallus gallus (Chicken)| Length = 918 Score = 192 bits (487), Expect = 7e-48 Identities = 155/541 (28%), Positives = 262/541 (48%), Gaps = 55/541 (10%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSK-----NVILADEMGLGKTVSACAFLSSLC------CEFKI 850 L PHQ E + +L +C + ILADEMGLGKT+ + + +L C+ + Sbjct: 303 LRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCK-PV 361 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 L++ P S + NW EF W GS R + + ++ + Sbjct: 362 LKRALIVTPGSLVKNWKKEFQKWL---------GSERIKVFTVDQDH------KVEEFIS 406 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 S ++V++ +YEM+L ++++ + +LI DEGHR + R++LT Sbjct: 407 SPLYSVMIISYEMLLRSLDQIQAIEFNLLICDEGHRLKNSSIKTTTALTNLSCERRIILT 466 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE--------LATAE-------KVEEL 1345 GTP+QN++ E Y L+ F+ P SL+++ + + E AT E + EL Sbjct: 467 GTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAEL 526 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH 1525 +L +LRR ++ K +PPK E ++ + T++Q E YR +L+ +V+ + +G Sbjct: 527 TRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSS--RVISSCLQGRLE 584 Query: 1526 QS-LLNIVMQLRKVCNHPYLI----------PGTE---------------PESGSPEFLH 1627 S L + L+K+CNHP L+ P ++ P+ + + Sbjct: 585 NSPHLICIGALKKLCNHPCLLFKALKEKCCDPKSDEHVESSLYEGLTDVFPQDYTSDTFS 644 Query: 1628 EMRIKASAKLALLHSMLKVLH--SDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDG 1801 E+ S KL +L +L + S RV++ S T+ L++L + T + ++ R+DG Sbjct: 645 EI---DSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVLLE--TCKCYGYSYTRLDG 699 Query: 1802 SVSVAERQAAITRFNQD-KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1978 + V++RQ + FN F+FLLS+++ G+G+NL A +I+YD D+NP DIQAM Sbjct: 700 NTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMA 759 Query: 1979 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEE 2158 R R GQ + +YRL+ ++EE+I Q K L V+ S++ + I + EE Sbjct: 760 RVWRDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEH----IHFSVEE 815 Query: 2159 L 2161 L Sbjct: 816 L 816
>Q6PFE3:RA54B_MOUSE DNA repair and recombination protein RAD54B - Mus musculus (Mouse)| Length = 886 Score = 191 bits (484), Expect = 2e-47 Identities = 153/528 (28%), Positives = 251/528 (47%), Gaps = 52/528 (9%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNV-----ILADEMGLGKTVSACAFLSSLCCEFK-----IN 853 L PHQ + + +L +C + V ILADEMGLGKT+ + + +L C+ + Sbjct: 274 LRPHQKDGIIFLYECVMGMRAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 333 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 L++ P S + NW EF W GS R + + ++ + S Sbjct: 334 KKTLIVTPGSLVNNWRKEFQKWL---------GSERIKIFTVDQDH------KVEEFINS 378 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTG 1213 +VL+ +YEM+L ++++P+ +LI DEGHR + V+LTG Sbjct: 379 TFHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTALSSLSCEKTVILTG 438 Query: 1214 TPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE--------LATAEKVE-------ELK 1348 TP+QN++ E + L++F+ P SL+S+ + + E ++ E+ E EL Sbjct: 439 TPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEERELGERRATELT 498 Query: 1349 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQ--VLRNTGKGGA 1522 +L +LRR ++ K +PPK E +V ++Q E YR +L L+ + A Sbjct: 499 RLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSVRFCLQGLLENSA 558 Query: 1523 HQSLLNIVMQLRKVCNHPYL----IPGTEPESGSPEFLH------------------EMR 1636 H L + L+K+CNHP L + G E S E + Sbjct: 559 H---LICIGALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQGLLSVFPAGYNPLQFS 615 Query: 1637 IKASAKLALLHSMLKVLHS--DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVS 1810 + S KL +L +L V+H +V++ S + L++LE+ A R+DG Sbjct: 616 EEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKRH--GYACARLDGQTP 673 Query: 1811 VAERQAAITRFNQD-KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1987 V++RQ + FN T F+FLLS+++ G+G+NL +I+YD D+NP DIQAM+R Sbjct: 674 VSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVW 733 Query: 1988 RIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVE 2131 R GQ + + +YRL+ ++EE+I Q K L V+ + S + ++ Sbjct: 734 RDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQ 781
>P53115:INO80_YEAST Putative DNA helicase INO80 - Saccharomyces cerevisiae (Baker's| yeast) Length = 1489 Score = 188 bits (478), Expect = 8e-47 Identities = 118/349 (33%), Positives = 184/349 (52%), Gaps = 23/349 (6%) Frame = +2 Query: 629 NCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVS 808 N N + E+T I+QPK L L +QL+ LNWL + + N ILADEMGLGKTV Sbjct: 684 NFQNPTSLGEIT--IEQPKIL-ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQ 740 Query: 809 ACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYE 988 + + L+ L I P LV+ P ST+ NW+ E + + P ++ Y G+A R +R++ Sbjct: 741 SISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKF- 799 Query: 989 WHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXX 1168 W + + K+ F+V++T+Y+MV+ DA YL+ + W+ +I+DE Sbjct: 800 WDRKNL----RYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWK 855 Query: 1169 XXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF----------NEL 1318 ++R+LLTGTP+QN++ E++ LL+F+ P+ F S F E F N Sbjct: 856 NLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTK 915 Query: 1319 ATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RAMLTKNY 1489 +++ L ++ P MLRR+KK+ + K E V +LT QA+ Y ++ ++ NY Sbjct: 916 LNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNY 975 Query: 1490 QVLRN----------TGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPES 1606 + N G+ Q+L+N VMQ RKVCNHP L + +S Sbjct: 976 DAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDS 1024 Score = 149 bits (376), Expect = 5e-35 Identities = 84/191 (43%), Positives = 122/191 (63%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I SAKL L +L L S+GHRVLI+ QMTK++D++E+YLT + R+DGS + Sbjct: 1295 ITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLT--YRQYNHIRLDGSSKLE 1352 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 +R+ + + + FVFLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAHR+G Sbjct: 1353 DRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1412 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNND 2176 Q+ ++ VYRL+VR ++EER+ AK+K + Q+ + +K ++ I E+ N+ Sbjct: 1413 QTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTI------EVGENDS 1466 Query: 2177 EVNGKDNDEAS 2209 EV + + S Sbjct: 1467 EVTREGSKSIS 1477
>Q4IL82:INO80_GIBZE Putative DNA helicase INO80 - Gibberella zeae (Fusarium graminearum)| Length = 1904 Score = 186 bits (473), Expect = 3e-46 Identities = 139/447 (31%), Positives = 217/447 (48%), Gaps = 20/447 (4%) Frame = +2 Query: 326 NSWISESELRT-LAKRKLENYKAKYGMGLINICKDQWCQPQRVIALRVSLDEVEEALIKW 502 N IS++EL + +K++ + + I KD Q+++ + V + + Sbjct: 915 NFLISQTELYSHFIGKKIKTDEVERSTDNPEIAKDAHQTDQKMLDIDEPTGPVIGKVTNF 974 Query: 503 YGLPYDECTWERLDEPIMLKYVHLVTQF----KNFECQALDRDVRGNCANARNRQEL-TV 667 L ++E + E L M + + + ++F Q LD D G N +N L V Sbjct: 975 ENLDFEEGSDEALRAAAMANAQNAIAEAQKKARDFNNQGLDMDDEGEM-NFQNPTGLGDV 1033 Query: 668 LIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFK 847 I+QPK L L +QL+ LNWL + + N ILADEMGLGKTV + + ++ L + Sbjct: 1034 EIEQPK-LINAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKHD 1092 Query: 848 INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 I P LV+ P ST+ NW E A + P ++ Y G A R +R++ W T + Sbjct: 1093 IWGPFLVVAPASTLHNWQQEIAKFVPEFKILPYWGGASDRKVLRKF-WDRKHTTY----R 1147 Query: 1028 KSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLL 1207 K F+V +T+Y++V+ D Y + + W+ +I+DE ++R+LL Sbjct: 1148 KDAPFHVCVTSYQLVVSDVAYFQKMRWQYMILDEAQAIKSSQSSRWKALLNFHCRNRLLL 1207 Query: 1208 TGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF----------NELATAEKVEELKKLV 1357 TGTP+QNN+ E++ LL+F+ P+ F S F E F N ++++ L ++ Sbjct: 1208 TGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMIL 1267 Query: 1358 APHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK-NYQVLRNTGKGGAHQ-- 1528 P MLRR+KK K + K E + +LT Q YY + + N L G Q Sbjct: 1268 KPFMLRRVKKHVQKELGDKIELDIFCDLTYRQRAYYSNLRNQINIMDLVEKATMGDDQDS 1327 Query: 1529 -SLLNIVMQLRKVCNHPYLIPGTEPES 1606 +L+N+VMQ RKVCNHP L E S Sbjct: 1328 GTLMNLVMQFRKVCNHPDLFERAEVNS 1354 Score = 142 bits (358), Expect = 7e-33 Identities = 73/144 (50%), Positives = 103/144 (71%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S KLA L +L L S+GHRVL++ QMT+++D++E+YLT + + R+DGS + +R+ Sbjct: 1625 SGKLAKLDDLLFKLKSEGHRVLLYFQMTRMIDMMEEYLT--YRNYKYCRLDGSTKLEDRR 1682 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 + F F+FLLSTR+ GLGINL TADTVI YDSD+NP D QAM+RAHR+GQ+ Sbjct: 1683 DTVHDFQTRPEIFIFLLSTRAGGLGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQTK 1742 Query: 2006 RLLVYRLVVRASVEERILQLAKKK 2077 ++ VYRL+ R ++EERI + A +K Sbjct: 1743 QVTVYRLITRGTIEERIRKRAMQK 1766
>P47264:Y018_MYCGE Uncharacterized ATP-dependent helicase MG018 - Mycoplasma genitalium| Length = 1031 Score = 185 bits (470), Expect = 7e-46 Identities = 130/478 (27%), Positives = 232/478 (48%), Gaps = 6/478 (1%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMP 892 +Q E + W+R ILADEMGLGKT + K LP L++VP S + Sbjct: 581 YQKEGVKWIRALEDNQFGGILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLIIVPASLLL 640 Query: 893 NWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMV 1072 NW +EF +APH+ +V +G+ + RS + YE S K +LL ++ ++ Sbjct: 641 NWKSEFQKFAPHVKIVTANGNFKERSQV--YE--------------SLKNQILLMSFNVL 684 Query: 1073 LVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNL 1252 D ++ + +++DE + LTGTP++N + ++++ Sbjct: 685 RSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSC 744 Query: 1253 LNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVP 1432 +F+ P + F ++F + E ++L K +P +LRR K +K +P K + Sbjct: 745 FDFVLPNFLGNKKQFSDQFEKEKNDESFQKLMKKTSPFILRRTKNKVLKELPKKIITDIY 804 Query: 1433 VELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGS 1612 VEL+ + Y T + ++ + A ++L+++++LR +C+ L+ + Sbjct: 805 VELSEEHQKLYDKQKTDGLKEIKESDAKNA-LNILSLILKLRHICS---LVKDNDVND-- 858 Query: 1613 PEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFER 1792 E KA+A L +++ L+ + +V++F+Q ++D + TL+ Sbjct: 859 ----FEDNSKANAALNIIYEALE----NKRKVILFTQFLDVIDCFKQ--TLKNQKIDHLV 908 Query: 1793 VDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1972 DG +V R I +FN K V L S ++ G+GINL A+ VI +D +N + QA Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968 Query: 1973 MNRAHRIGQSNRLLVYRLVVRASVEERILQLAK------KKLMLDQLFVNKSESQKEV 2128 +RAHRIGQS + VYR++ + ++EER+ Q+ KK +++ + KS S +E+ Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTLVEDVNFFKSLSHEEL 1026
>Q6BGY8:INO80_DEBHA Putative DNA helicase INO80 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 1364 Score = 183 bits (464), Expect = 3e-45 Identities = 118/346 (34%), Positives = 181/346 (52%), Gaps = 16/346 (4%) Frame = +2 Query: 617 DVRGNCANARNRQEL-TVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGL 793 D G N +N L + I QP LK L +Q++ LNWL + + N ILADEMGL Sbjct: 538 DTNGEEMNFQNPTLLGDINISQPDLLKC-TLKEYQVKGLNWLANLYEQGINGILADEMGL 596 Query: 794 GKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSA 973 GKTV + + L+ L I P LV+ P ST+ NW E + + P V+ Y G+A+ R Sbjct: 597 GKTVQSISVLAYLAETHNIWGPFLVVTPASTLHNWQQEISRFVPEFKVIPYWGNAKDRKV 656 Query: 974 IRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXX 1153 +R++ W + + K F+VL+T+Y++V+ DA Y + + W+ +I+DE Sbjct: 657 LRKF-WDRKNF----RYGKDAPFHVLVTSYQLVVADAAYFQKMKWQYMILDEAQAIKSSQ 711 Query: 1154 XXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-------- 1309 ++R+LLTGTP+QN++ E++ LL+F+ P+ F S F + F Sbjct: 712 SSRWKSLLSFSCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHA 771 Query: 1310 --NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK 1483 N +++ L ++ P MLRR+KK+ + K E V +LT Q +YY+ MLT Sbjct: 772 QSNTELNEQQLRRLHVILKPFMLRRIKKNVQSELGDKLEIDVFCDLTHRQKKYYQ-MLTS 830 Query: 1484 NYQVL-----RNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPES 1606 ++ N + QSL+N+VMQ RKVCNHP L + +S Sbjct: 831 QISIMDLLDSANNSSDDSAQSLMNLVMQFRKVCNHPDLFERADVKS 876 Score = 145 bits (367), Expect = 6e-34 Identities = 87/224 (38%), Positives = 132/224 (58%), Gaps = 7/224 (3%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I S KL+ L +L L + HRVLI+ QMTK++D++E+YLT + + R+DGS + Sbjct: 1138 ITESGKLSKLDELLVDLRQNDHRVLIYFQMTKMMDLMEEYLT--YRQHKYIRLDGSSKLD 1195 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 +R+ + + FVFLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAHR+G Sbjct: 1196 DRRDLVHDWQTKPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1255 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQL-------FVNKSESQKEVEDIIRWGTE 2155 Q+ ++ VYRL+ R ++EER+ AK+K + Q+ NK ES + +D+ Sbjct: 1256 QTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEGKSAIANKEESGNKKKDV-----A 1310 Query: 2156 ELFRNNDEVNGKDNDEASDAKHDVSDIEVKHRRKTGGLGDVYED 2287 L ND+ + ++ S+ K ++ D + + L D+Y + Sbjct: 1311 FLLLGNDDSSAAALNDDSEEKQNLQD---SKKSQAKNLEDMYHE 1351
>Q4WTV7:INO80_ASPFU Putative DNA helicase ino80 - Aspergillus fumigatus (Sartorya| fumigata) Length = 1708 Score = 182 bits (462), Expect = 6e-45 Identities = 115/326 (35%), Positives = 174/326 (53%), Gaps = 14/326 (4%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 I QPK L L +QL+ LNWL + + N ILADEMGLGKT+ + + ++ L I Sbjct: 823 ISQPKMLTA-KLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNI 881 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P LV+ P ST+ NW E + P + V+ Y GSA+ R +R++ W D I +K+ Sbjct: 882 WGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKF-W---DRKHITYTKE 937 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 S +F+VL+T+Y++V++D+ Y + V W+ +I+DE ++R+LLT Sbjct: 938 S-EFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLT 996 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF----------NELATAEKVEELKKLVA 1360 GTP+QNN+ E++ LL+F+ P F S F E F N +++ L ++ Sbjct: 997 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILK 1056 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK--NYQVLRNTGKGGAHQS- 1531 P MLRR+KK + + K E+ V +LT Q YY + + ++ G S Sbjct: 1057 PFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKAAVGDEADST 1116 Query: 1532 -LLNIVMQLRKVCNHPYLIPGTEPES 1606 L+N+VMQ RKVCNHP L E +S Sbjct: 1117 TLMNLVMQFRKVCNHPDLFERAETKS 1142 Score = 145 bits (365), Expect = 1e-33 Identities = 77/177 (43%), Positives = 113/177 (63%), Gaps = 10/177 (5%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S KLA L +L+ L + GHRVL++ QMT+++D++E+YLT + + R+DGS + +R+ Sbjct: 1417 SGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLT--YRNYKYCRLDGSTKLEDRR 1474 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 + F Q FVFLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAHR+GQ+ Sbjct: 1475 DTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTR 1534 Query: 2006 RLLVYRLVVRASVEERILQLAKKKLMLDQLFV----------NKSESQKEVEDIIRW 2146 ++ VYRL+ R ++EERI + A +K + ++ + N + +DI W Sbjct: 1535 QVTVYRLITRGTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRESRTKDIAMW 1591
>Q6CNY4:INO80_KLULA Putative DNA helicase INO80 - Kluyveromyces lactis (Yeast) (Candida| sphaerica) Length = 1489 Score = 181 bits (459), Expect = 1e-44 Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 16/340 (4%) Frame = +2 Query: 611 DRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMG 790 + D N N + E+T I QPK L L +QL+ LNWL + + N ILADEMG Sbjct: 718 EEDGELNFQNPTSLGEIT--IDQPKML-ACTLKEYQLKGLNWLANLYDQGINGILADEMG 774 Query: 791 LGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARS 970 LGKTV + + L+ L + I P +V+ P ST+ NW+ E + + P ++ Y G+A R Sbjct: 775 LGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRK 834 Query: 971 AIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXX 1150 +R++ W + + F+V++T+Y+MV+ DA+YL+ + W+ +I+DE Sbjct: 835 TLRKF-WDRKHL----RYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSS 889 Query: 1151 XXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF------- 1309 ++R+LLTGTP+QNN+ E++ LL+F+ P+ F S F + F Sbjct: 890 QSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESH 949 Query: 1310 ---NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RA 1471 N E++ L ++ P MLRR+KK+ + K E V +LT QA+ Y ++ Sbjct: 950 AESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKS 1009 Query: 1472 MLTKNYQVLRNTGKGG---AHQSLLNIVMQLRKVCNHPYL 1582 ++ Y + N + Q L+N+VM+ RKVCNHP L Sbjct: 1010 QVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049 Score = 140 bits (352), Expect = 3e-32 Identities = 77/168 (45%), Positives = 110/168 (65%), Gaps = 3/168 (1%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I SAKL L +L L + HRVLI+ QMTK++D++E+YLT + R+DGS + Sbjct: 1315 ITESAKLKKLDELLVKLKEEDHRVLIYFQMTKMMDLMEEYLT--YRQYTHIRLDGSSKLD 1372 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 +R+ + + F+FLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAHR+G Sbjct: 1373 DRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1432 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---KSESQKEVE 2131 Q+ ++ VYRL++R ++EER+ AK+K + Q+ + K QK +E Sbjct: 1433 QTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKENKQKIIE 1480
>Q4IAK7:SWR1_GIBZE Helicase SWR1 - Gibberella zeae (Fusarium graminearum)| Length = 1691 Score = 180 bits (456), Expect = 3e-44 Identities = 112/314 (35%), Positives = 160/314 (50%), Gaps = 19/314 (6%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q + L+WL + S N ILADEMGLGKT+ A L+ L C ++ P LV+VP Sbjct: 809 GTLREYQRDGLDWLAGLYANSTNGILADEMGLGKTIQTIALLAHLACTHEVWGPHLVIVP 868 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S M NW EF W P ++ Y+GS R RQ W+ D +NV +T Sbjct: 869 TSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQ-GWNNDDI-----------WNVCIT 916 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++VL D + W +I+DE H Q R+LLTGTPLQNN+ Sbjct: 917 SYQLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLT 976 Query: 1238 EMYNLLNFLQPA-----SFPSLASFEEKF----NELATAEK----------VEELKKLVA 1360 E+++LL FL PA F L F + F +++ + + + +L K++ Sbjct: 977 ELWSLLFFLMPAENGVGGFADLQEFHDWFAKPESQILESGREQMDDEARAIISKLHKVLR 1036 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLN 1540 P++LRRLK D K +P K E + L+ Q E Y L++ + T G + S++N Sbjct: 1037 PYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLSRT--DTKETLNSGNYLSIIN 1094 Query: 1541 IVMQLRKVCNHPYL 1582 +MQLRKVCNHP L Sbjct: 1095 CLMQLRKVCNHPDL 1108 Score = 144 bits (362), Expect = 2e-33 Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 13/185 (7%) Frame = +2 Query: 1598 PESGSPEFLHEMRIKAS-------------AKLALLHSMLKVLHSDGHRVLIFSQMTKLL 1738 P+ P+ HE R++ S KL +L +L+ L + GHR LIF+QMTK+L Sbjct: 1341 PKEAPPDPWHEGRMRLSIQFPDKRLLQYDCGKLQILDKLLRKLQAGGHRALIFTQMTKVL 1400 Query: 1739 DILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATA 1918 DILE +L + G K + R+DG+ V +RQ RFN D F+LSTRS GLGINL A Sbjct: 1401 DILEQFLNIH-GHK-YLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLTGA 1458 Query: 1919 DTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLF 2098 DTVI YD D+NP D Q +R HRIGQ+ + +YRLV ++E IL+ A +K MLD + Sbjct: 1459 DTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVV 1518 Query: 2099 VNKSE 2113 + + E Sbjct: 1519 IQEGE 1523
>Q7S133:SWR1_NEUCR Helicase swr-1 - Neurospora crassa| Length = 1845 Score = 179 bits (454), Expect = 5e-44 Identities = 114/315 (36%), Positives = 158/315 (50%), Gaps = 20/315 (6%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q L+WL + + N ILADEMGLGKT+ A L+ L C ++ P LV+VP Sbjct: 943 GTLREYQHHGLDWLAGLYANNTNGILADEMGLGKTIQTIALLAHLACHHEVWGPHLVIVP 1002 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S M NW EF W P ++ Y+G+ R RQ W+ D +NV +T Sbjct: 1003 TSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQ-GWNNDDV-----------WNVCIT 1050 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y+MVL D R W +I+DE H Q R+LLTGTPLQNN+ Sbjct: 1051 SYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLT 1110 Query: 1238 EMYNLLNFLQP-----ASFPSLASF---------------EEKFNELATAEKVEELKKLV 1357 E+++LL FL P F L F E+ ++ A A + +L K++ Sbjct: 1111 ELWSLLYFLAPPENGEGGFVDLTEFHNWFARPESQILESGREQLDDEARA-IIAKLHKVL 1169 Query: 1358 APHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLL 1537 P++LRRLK D K +P K E + L+ Q E Y L++ R T + G + S++ Sbjct: 1170 RPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLSR--ADTRETLQSGNYMSII 1227 Query: 1538 NIVMQLRKVCNHPYL 1582 N +MQLRKVCNHP L Sbjct: 1228 NCLMQLRKVCNHPDL 1242 Score = 145 bits (366), Expect = 8e-34 Identities = 137/460 (29%), Positives = 194/460 (42%), Gaps = 53/460 (11%) Frame = +2 Query: 962 ARSAIRQYEWHEGDATQIGKSKKSHKF--NVLLTTYEMVLVDATYLRSVPWEVLIVDEGH 1135 +RS YEW E KF N LL T M V+ ++L +P E + + H Sbjct: 1255 SRSVPADYEWKE-------------KFIRNRLLATKPMTTVNLSFLNMIPTEYEDLSKTH 1301 Query: 1136 RXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE---- 1303 HR+LL Q N L P+S S + E Sbjct: 1302 TDRIAQLS----------SHRILLDLREAQKVRAN--NAYTALDPSSVKSNLVYLESAAR 1349 Query: 1304 --KFNELATAEKVEELKKLVAPHMLRRLKKDAMKNI---PPKTERMVPVELTSI------ 1450 +F EL + L++ P +RL + + P K VP ++ S Sbjct: 1350 WGRFEELQHCVYINALRRQQRPIYGKRLTEFLTLDTHLRPYKPRPRVPAKIMSWFEEDSF 1409 Query: 1451 -----------QAEYYRAMLTKNYQVLRNTGKGGAHQSLL------NIVMQLRKVCNHPY 1579 +AE +TK V G L + L + P Sbjct: 1410 LLHNAIPTLQQRAESMEMTITKFACVTPAVVTGPEMNRFLLGERGIQLFEDLDLKLSAPV 1469 Query: 1580 LIPGTEPESGSPEFLHEMRIKAS-------------AKLALLHSMLKVLHSDGHRVLIFS 1720 P P+ HE R++ + KL L +L+ L + GHR LIF+ Sbjct: 1470 KYAPYMPPQPPPDPWHEARMRLTIQFPDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFT 1529 Query: 1721 QMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLG 1900 QMTK+LDILE +L + G K + R+DG+ V +RQ RFN D F+LSTRS GLG Sbjct: 1530 QMTKVLDILEQFLNIH-GHK-YLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLG 1587 Query: 1901 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL 2080 INL ADTVI YD D+NP D Q +R HRIGQ+ + +YRLV ++E IL+ A +K Sbjct: 1588 INLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQ 1647 Query: 2081 MLDQLFVNKSE------SQKEVEDIIRWGTEELFRNNDEV 2182 MLD + + + E ++ V D++ E + N D+V Sbjct: 1648 MLDDVVIQEGEFTTDYFNRLSVRDVLGSNGEVIASNEDDV 1687
>P32863:RAD54_YEAST DNA repair and recombination protein RAD54 - Saccharomyces cerevisiae| (Baker's yeast) Length = 898 Score = 179 bits (454), Expect = 5e-44 Identities = 141/513 (27%), Positives = 244/513 (47%), Gaps = 44/513 (8%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCCEF----KINLPCLVLVPLSTMPNWMAEFASW-APH-L 931 I+ADEMGLGKT+ A + +L + ++ C+++ P S + NW E W P+ L Sbjct: 332 IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTL 391 Query: 932 NVVEYHGSARA----RSAIRQ--YEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYL 1093 + G + + + Q + W + I K VL+ +YE + + L Sbjct: 392 TPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKP-------VLIISYETLRRNVDQL 444 Query: 1094 RSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPA 1273 ++ +++ DEGHR RV+L+GTP+QN++ E + LL+F P Sbjct: 445 KNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPG 504 Query: 1274 SFPSLASFEEKFN--------------ELATAE-KVEELKKLVAPHMLRRLKKDAMKNIP 1408 S A F + F E+ E ++++L +V+ ++RR K +P Sbjct: 505 LLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLP 564 Query: 1409 PKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIP 1588 K E ++ V L +Q E Y ++ + ++ KG L + L+K+CNHP L+ Sbjct: 565 CKYEHVIFVNLKPLQNELYNKLIKS--REVKKVVKGVGGSQPLRAIGILKKLCNHPNLL- 621 Query: 1589 GTEPESGSPEFLH-------------EMRIKASAKLALLHSML-KVLHSDGHRVLIFSQM 1726 E E + L +++ K SAK ++L L K+ ++++ S Sbjct: 622 NFEDEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNY 681 Query: 1727 TKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGLGI 1903 T+ LD++E + + R+DG++S+ +RQ + RFN + + F+FLLS+++ G GI Sbjct: 682 TQTLDLIEKMC--RYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGI 739 Query: 1904 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLM 2083 NL A+ +I+ D D+NP AD QA+ R R GQ +YR + ++EE+I Q K+ Sbjct: 740 NLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMS 799 Query: 2084 LDQLFVNKSESQKEV--EDIIRWGTEELFRNND 2176 L V+ E + + D +R +LF+ N+ Sbjct: 800 LSSCVVDAKEDVERLFSSDNLR----QLFQKNE 828
>Q872I5:INO80_NEUCR Putative DNA helicase ino-80 - Neurospora crassa| Length = 2001 Score = 179 bits (454), Expect = 5e-44 Identities = 127/397 (31%), Positives = 196/397 (49%), Gaps = 24/397 (6%) Frame = +2 Query: 590 NFECQALDRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNV 769 N E LD D N N + V I+QPK L L +QL+ LNWL + + N Sbjct: 1083 NKEESKLDEDGEMNFQNPTMMGD--VEIEQPK-LLNCQLKEYQLKGLNWLVNLYEQGING 1139 Query: 770 ILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYH 949 ILADEMGLGKTV + + ++ L ++ I P LV+ P ST+ NW E + P V+ Y Sbjct: 1140 ILADEMGLGKTVQSISVMAYLAEKYDIWGPFLVVAPASTLHNWQQEITKFVPQFKVLPYW 1199 Query: 950 GSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDE 1129 G+A R +R++ W T KK F+V++T+Y++V+ D Y + + W+ +I+DE Sbjct: 1200 GTAGDRKVLRKF-WDRKHTTY----KKDAPFHVMITSYQLVVSDVAYFQKMKWQYMILDE 1254 Query: 1130 GHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF 1309 ++R+LLTGTP+QNN+ E++ LL+F+ P+ F S F E F Sbjct: 1255 AQAIKSSQSSRWKCLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWF 1314 Query: 1310 ----------NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAE 1459 N ++++ L ++ P MLRR+KK K + K E V +LT Q Sbjct: 1315 SKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQKELGDKIEMDVFCDLTYRQRA 1374 Query: 1460 YY---RAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPES-------- 1606 Y R ++ + + T SL+N+VMQ RKVCNHP L + S Sbjct: 1375 MYANLRNQISIMDLIEKATLGDDDSASLMNLVMQFRKVCNHPDLFERADTASPYSFGHFA 1434 Query: 1607 GSPEFLHE---MRIKASAKLALLHSMLKVLHSDGHRV 1708 + F+ E + + S + + + + ++L DG R+ Sbjct: 1435 ETASFIREGSQVTVGYSTRSLIQYELPRLLWRDGGRL 1471 Score = 142 bits (359), Expect = 5e-33 Identities = 72/157 (45%), Positives = 108/157 (68%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S KLA L +L+ L +GHRVL++ QMT+++D++E+YLT + + R+DGS + +R+ Sbjct: 1697 SGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLT--YRNYKYCRLDGSTKLEDRR 1754 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 + F F+FLLSTR+ GLGINL +ADTVI YDSD+NP D QAM+RAHR+GQ+ Sbjct: 1755 DTVADFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTK 1814 Query: 2006 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSES 2116 ++ VYRL+ R ++EERI + A +K + ++ + S Sbjct: 1815 QVTVYRLITRGTIEERIRKRAMQKEEVQRVVITGGSS 1851
>P38086:RDH54_YEAST DNA repair and recombination protein RDH54 - Saccharomyces cerevisiae| (Baker's yeast) Length = 924 Score = 178 bits (451), Expect = 1e-43 Identities = 144/517 (27%), Positives = 242/517 (46%), Gaps = 48/517 (9%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCCE--FKINLPC--------------LVLVPLSTMPNWM 901 +LAD+MGLGKT+ + + +L + F + C LV+ P++ + NW Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368 Query: 902 AEFASWAPHLNVVEYHGSARA-----RSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYE 1066 EF W + S+R + A+R + K + VL+ YE Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNF------------LKVQRTYQVLIIGYE 416 Query: 1067 MVLVDATYLRSVPW--EVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGE 1240 +L + L ++L+ DEGHR + ++LLTGTP+QN++ E Sbjct: 417 KLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNE 476 Query: 1241 MYNLLNFLQPASFPSLASFEEKF---------------NELATA--EKVEELKKLVAPHM 1369 + +++F+ P S ASF+ +F EL E+ +E+ ++ + Sbjct: 477 FFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFI 536 Query: 1370 LRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVM 1549 LRR K +PPKT+ ++ + S Q ++ +L Q R S L ++ Sbjct: 537 LRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDIL----QGARLDFGQLTFSSSLGLIT 592 Query: 1550 QLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHS--------DGHR 1705 L+KVCN P L+ G++P S + + + + S +L LKVL + + Sbjct: 593 LLKKVCNSPGLV-GSDPYYKS--HIKDTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEK 649 Query: 1706 VLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTR 1885 V++ S T+ LDI+E+ + + + R+DGS+ +R + +T FN++ F FLLS + Sbjct: 650 VVVVSNYTQTLDIIENLMNM--AGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLLSAK 707 Query: 1886 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQL 2065 S G+G+NL +I++D+D+NP D+QAM+R HR GQ +YRLV ++E+ILQ Sbjct: 708 SGGVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQR 767 Query: 2066 AKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNND 2176 K L Q F+ SE + + ++LF D Sbjct: 768 QLMKNSLSQKFLGDSEMRNKES-----SNDDLFNKED 799
>Q6ZPV2:INOC1_MOUSE Putative DNA helicase INO80 complex homolog 1 - Mus musculus (Mouse)| Length = 1559 Score = 177 bits (449), Expect = 2e-43 Identities = 122/364 (33%), Positives = 184/364 (50%), Gaps = 17/364 (4%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 I QP + G L +QL+ +NWL + + N ILADEMGLGKTV + A L+ L I Sbjct: 510 IPQPT-IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENI 568 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P L++ P ST+ NW EF + P V+ Y G+ R IR++ W +Q + Sbjct: 569 WGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF-W-----SQKTLYTQ 622 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 F+V++T+Y++V+ D Y + V W+ +++DE ++R+LLT Sbjct: 623 DAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 682 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF---------NELATAE-KVEELKKLVA 1360 GTP+QN + E++ LL+F+ P F S F E F N+ A E ++ L ++ Sbjct: 683 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 742 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK-NYQVLRNTGKGGAHQ--- 1528 P MLRR+KKD + K E + +LTS Q Y+A+ K + + L + G Q Sbjct: 743 PFMLRRIKKDVENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQN 802 Query: 1529 ---SLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDG 1699 SL+N+VMQ RKVCNHP L E+ SP F ++ +K H ++V + Sbjct: 803 TTSSLMNLVMQFRKVCNHPELF--ERQETWSP-FHISLKPYEISKFIYRHGQIRVFNHSR 859 Query: 1700 HRVL 1711 R L Sbjct: 860 DRWL 863 Score = 152 bits (383), Expect = 8e-36 Identities = 87/214 (40%), Positives = 130/214 (60%), Gaps = 4/214 (1%) Frame = +2 Query: 1628 EMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSV 1807 E I S KL L +L L S GHRVLI+SQMT+++D+LE+Y+ + + R+DGS Sbjct: 1097 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMV--YRKHTYMRLDGSS 1154 Query: 1808 SVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1987 ++ER+ + F FVFLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAH Sbjct: 1155 KISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1214 Query: 1988 RIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSESQKEVEDIIRWGTE 2155 R+GQ+ ++ VYRL+ + ++EERILQ AK+K + ++ ++ K ++ K E + Sbjct: 1215 RLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVV------ 1268 Query: 2156 ELFRNNDEVNGKDNDEASDAKHDVSDIEVKHRRK 2257 L +++E+ K + + VK R++ Sbjct: 1269 SLLLDDEELEKKLRLRQEEKRQQEESNRVKERKR 1302
>Q9ULG1:INOC1_HUMAN Putative DNA helicase INO80 complex homolog 1 - Homo sapiens (Human)| Length = 1556 Score = 177 bits (449), Expect = 2e-43 Identities = 122/364 (33%), Positives = 185/364 (50%), Gaps = 17/364 (4%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 I QP + G L +QL+ +NWL + + N ILADEMGLGKTV + A L+ L I Sbjct: 508 IPQPT-IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENI 566 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P L++ P ST+ NW EF + P V+ Y G+ R IR++ W +Q + Sbjct: 567 WGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRF-W-----SQKTLYTQ 620 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 F+V++T+Y++V+ D Y + V W+ +++DE ++R+LLT Sbjct: 621 DAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 680 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF---------NELATAE-KVEELKKLVA 1360 GTP+QN + E++ LL+F+ P F S F E F N+ A E ++ L ++ Sbjct: 681 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 740 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK-NYQVLRNTGKGGAHQ--- 1528 P MLRR+KKD + K E ++ +LTS Q Y+A+ K + + L + G Q Sbjct: 741 PFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQN 800 Query: 1529 ---SLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDG 1699 SL+N+VMQ RKVCNHP L E+ SP F ++ +K H ++V + Sbjct: 801 TTSSLMNLVMQFRKVCNHPELF--ERQETWSP-FHISLKPYHISKFIYRHGQIRVFNHSR 857 Query: 1700 HRVL 1711 R L Sbjct: 858 DRWL 861 Score = 152 bits (383), Expect = 8e-36 Identities = 87/214 (40%), Positives = 130/214 (60%), Gaps = 4/214 (1%) Frame = +2 Query: 1628 EMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSV 1807 E I S KL L +L L S GHRVLI+SQMT+++D+LE+Y+ + + R+DGS Sbjct: 1094 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMV--YRKHTYMRLDGSS 1151 Query: 1808 SVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1987 ++ER+ + F FVFLLSTR+ GLGINL ADTVI YDSD+NP D QAM+RAH Sbjct: 1152 KISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1211 Query: 1988 RIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSESQKEVEDIIRWGTE 2155 R+GQ+ ++ VYRL+ + ++EERILQ AK+K + ++ ++ K ++ K E + Sbjct: 1212 RLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVV------ 1265 Query: 2156 ELFRNNDEVNGKDNDEASDAKHDVSDIEVKHRRK 2257 L +++E+ K + + VK R++ Sbjct: 1266 SLLLDDEELEKKLRLRQEEKRQQEETNRVKERKR 1299
>Q5BAZ5:INO80_EMENI Putative DNA helicase ino80 - Emericella nidulans (Aspergillus| nidulans) Length = 1612 Score = 177 bits (449), Expect = 2e-43 Identities = 113/326 (34%), Positives = 173/326 (53%), Gaps = 14/326 (4%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 I QP L L +QL+ LNWL + + N ILADEMGLGKT+ + + ++ L I Sbjct: 788 ISQPTMLTA-KLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNI 846 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P LV+ P ST+ NW E + P++ V+ Y G+A+ R +R++ W D I +K+ Sbjct: 847 WGPFLVIAPASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKF-W---DRKHITYTKE 902 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 S +F+VL+T+Y++V++DA Y + V W+ +I+DE ++R+LLT Sbjct: 903 S-EFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLT 961 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF----------NELATAEKVEELKKLVA 1360 GTP+QNN+ E++ LL+F+ P F S F E F N +++ L ++ Sbjct: 962 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILK 1021 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK--NYQVLRNTGKGGAHQS- 1531 P MLRR+KK + + K E+ V +LT Q Y + + ++ G S Sbjct: 1022 PFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDETDST 1081 Query: 1532 -LLNIVMQLRKVCNHPYLIPGTEPES 1606 L+N+VMQ RKVCNHP L E +S Sbjct: 1082 TLMNLVMQFRKVCNHPDLFERAETKS 1107 Score = 147 bits (371), Expect = 2e-34 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 18/209 (8%) Frame = +2 Query: 1574 PYLIPGTEPE--SGSPEFLH----EMR--IKASAKLALLHSMLKVLHSDGHRVLIFSQMT 1729 PY +P PE S + H MR + S KLA L +L+ L + GHRVL++ QMT Sbjct: 1288 PYSLPPMLPEPISTKGRYTHIEVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMT 1347 Query: 1730 KLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINL 1909 +++D++E+YLT + + R+DGS + +R+ + F Q FVFLLSTR+ GLGINL Sbjct: 1348 RMIDLMEEYLT--YRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINL 1405 Query: 1910 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLD 2089 ADTVI YDSD+NP D QAM+RAHR+GQ+ ++ VYRL+ R+++EERI + A +K + Sbjct: 1406 TAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQ 1465 Query: 2090 QLFV----------NKSESQKEVEDIIRW 2146 ++ + N + +DI W Sbjct: 1466 RVVISGGAAGGVDFNTRNRDSKTKDIAMW 1494
>Q59KI4:INO80_CANAL Putative DNA helicase INO80 - Candida albicans (Yeast)| Length = 1387 Score = 176 bits (447), Expect = 3e-43 Identities = 114/358 (31%), Positives = 180/358 (50%), Gaps = 16/358 (4%) Frame = +2 Query: 581 QFKNFECQALDRDVRGNCANARNRQEL-TVLIQQPKELKGGMLFPHQLEALNWLRKCWFK 757 QF N E + D G N +N L + I QP LK L +QL+ LNWL + + Sbjct: 631 QFDNSEESFKNPDTNGEEMNFQNPTLLGDITIPQPNMLKC-TLKEYQLKGLNWLANLYEQ 689 Query: 758 SKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNV 937 N ILADEMGLGKTV + + L+ L + + P LV+ P ST+ NW E + P V Sbjct: 690 GINGILADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPASTLHNWQQEITKFVPEFKV 749 Query: 938 VEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVL 1117 + Y G+A+ R +R++ W + K F+VL+T+Y++++ D Y + + W+ + Sbjct: 750 LPYWGNAKDRKILRKF-WDRKSL----RYDKDSPFHVLVTSYQLIVADIAYFQKMKWQYM 804 Query: 1118 IVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF 1297 I+DE ++R+LLTGTP+QN++ E++ LL+F+ P+ F S F Sbjct: 805 ILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEF 864 Query: 1298 EEKF----------NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTS 1447 + F N +++ L ++ P MLRR+KK+ + K E V +LT+ Sbjct: 865 SDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKKNVQSELGDKVEIDVYCDLTT 924 Query: 1448 IQAEYYRAM-----LTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPES 1606 Q + Y+ + ++ + + + SL N+VMQ RKVCNHP L + S Sbjct: 925 RQKKLYQQLRSQISMSDTDLLELESNSTSSDSSLANLVMQFRKVCNHPDLFERADVNS 982 Score = 137 bits (345), Expect = 2e-31 Identities = 71/155 (45%), Positives = 106/155 (68%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I S KLA L +L L GHR+LI+ QMT+++ I E+YL + + R+DGS ++ Sbjct: 1232 IAESGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLA--YKSYKYIRLDGSTTIE 1289 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 R+ + + + F+F+LSTR+ GLG+NL +ADTVI YDSD+NP D QAM+RAHRIG Sbjct: 1290 SRREMVQAWQTNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIG 1349 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 2101 Q+ ++ V+RLV R ++E++IL+ AK+K + +L V Sbjct: 1350 QTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1384
>Q59U81:SWR1_CANAL Helicase SWR1 - Candida albicans (Yeast)| Length = 1641 Score = 176 bits (445), Expect = 5e-43 Identities = 116/332 (34%), Positives = 167/332 (50%), Gaps = 37/332 (11%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L P+Q + LNWL + + N ILADEMGLGKT+ + L+ L CE P L++VP Sbjct: 821 GTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLIIVP 880 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S M NW EF +AP V+ Y+GS + R+ R+ W++ DA F+V +T Sbjct: 881 TSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRK-GWNKPDA-----------FHVCIT 928 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++V+ D + W +I+DE H ++R+LLTGTPLQNN+ Sbjct: 929 SYQLVVQDQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLM 988 Query: 1238 EMYNLLNFLQPAS---------FPSLASFEEKF---------------------NELATA 1327 E+++LL FL P+S F +L F++ F NE T Sbjct: 989 ELWSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQ 1048 Query: 1328 EKVEELKKLVA-------PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKN 1486 + EE + VA P++LRRLKKD K +P K E +V L+ Q Y +++ Sbjct: 1049 KMDEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSR- 1107 Query: 1487 YQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYL 1582 + T G S++N +MQLRKVCNHP L Sbjct: 1108 -AKTKETLASGNFLSIINCLMQLRKVCNHPDL 1138 Score = 135 bits (339), Expect = 1e-30 Identities = 72/154 (46%), Positives = 99/154 (64%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L ++L+ L S GHR LIF+QMTK+LDILE +L + + R+DG+ + +RQ Sbjct: 1367 KLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIH--GYRYMRLDGATKIEDRQLL 1424 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 +FN+D VF+LSTRS GLGINL ADTVI YDSD+NP D Q +R HRIGQ + Sbjct: 1425 TEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDV 1484 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 +YR V ++E I++ A +K LD + + + E Sbjct: 1485 HIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGE 1518
>Q74Z27:INO80_ASHGO Putative DNA helicase INO80 - Ashbya gossypii (Yeast) (Eremothecium| gossypii) Length = 1414 Score = 175 bits (444), Expect = 7e-43 Identities = 114/349 (32%), Positives = 183/349 (52%), Gaps = 23/349 (6%) Frame = +2 Query: 629 NCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVS 808 N N + E+T I+QPK L L +QL+ LNWL + + N ILADEMGLGKTV Sbjct: 633 NFQNPTSLGEIT--IEQPKIL-ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQ 689 Query: 809 ACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYE 988 + + L+ L + I P +V+ P ST+ NW+ E + P ++ Y G+ R +R++ Sbjct: 690 SISVLAHLAERYNIWGPFIVVTPASTLHNWVNEIQKFVPDFKILPYWGNGNDRKILRRF- 748 Query: 989 WHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXX 1168 W D + SK + F+V++T+Y+M++ DA YL+ + W+ +I+DE Sbjct: 749 W---DRKHLRYSKDA-PFHVMITSYQMIVSDAAYLQKMKWQYMILDEAQAIKSSQSSRWK 804 Query: 1169 XXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF----------NEL 1318 ++R+LLTGTP+QN++ E++ LL+F+ P+ F S F + F N Sbjct: 805 NLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAQSNTQ 864 Query: 1319 ATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RAMLTKNY 1489 +++ L ++ P MLRR+KK+ + K E V +LT QA+ Y ++ ++ +Y Sbjct: 865 LNQQQLRRLHMILKPFMLRRIKKNVQSELGDKIEIDVMCDLTHRQAKLYQVLKSQVSASY 924 Query: 1490 QVLRN-----TGKGGAHQSL-----LNIVMQLRKVCNHPYLIPGTEPES 1606 + N +G + SL +N VM+ RKVCNHP L + S Sbjct: 925 DAIENAASNSSGDDSGNMSLSDSKIMNTVMEFRKVCNHPDLFERADVSS 973 Score = 137 bits (346), Expect = 2e-31 Identities = 73/167 (43%), Positives = 110/167 (65%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I SAKL L +L L + HRVLI+ QMT+++D++E+YLT + R+DGS + Sbjct: 1236 ITESAKLKKLDELLVRLKAGEHRVLIYFQMTRMMDLIEEYLT--YRQYKHIRLDGSSKLE 1293 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 +R+ + + F+FLLSTR+ GLGINL +ADTVI YDSD+NP D QAM+RAHR+G Sbjct: 1294 DRRDLVHDWQTKSDIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLG 1353 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDI 2137 Q+ ++ VYRL+++ ++EER+ AK+K + Q+ + + V+ I Sbjct: 1354 QTKQVTVYRLLIKGTIEERMRDRAKQKEHVQQVVMEGKTKENNVQTI 1400
>Q759G7:SWR1_ASHGO Helicase SWR1 - Ashbya gossypii (Yeast) (Eremothecium gossypii)| Length = 1486 Score = 175 bits (443), Expect = 9e-43 Identities = 113/335 (33%), Positives = 172/335 (51%), Gaps = 23/335 (6%) Frame = +2 Query: 647 NRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLS 826 N ++L+V+ L G L +Q + LNWL + + N ILADEMGLGKT+ A L+ Sbjct: 652 NLEKLSVVDVPVPPLLRGTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTIALLA 711 Query: 827 SLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDA 1006 L CE + P L++VP S + NW EF +AP V+ Y+GS + R R+ W++ DA Sbjct: 712 YLACEKENWGPHLIIVPTSVLLNWEMEFKRFAPGFKVLSYYGSPQQRKEKRR-GWNKLDA 770 Query: 1007 TQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXX 1186 F+V +T+Y++V+ D + W+ +I+DE H Sbjct: 771 -----------FHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFKSTRWQALLNFN 819 Query: 1187 XQHRVLLTGTPLQNNIGEMYNLLNFLQP---------ASFPSLASFEEKF---------- 1309 + R+LLTGTPLQNNI E+++LL FL P + F L +F++ F Sbjct: 820 TRRRLLLTGTPLQNNIAELWSLLYFLMPQTALENGKISGFADLDAFQQWFGKPVDKIIAA 879 Query: 1310 ----NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAML 1477 ++ T V +L +++ P++LRRLK D K +P K E ++ L+ Q Y + Sbjct: 880 NDSEHDDETRRTVSKLHQVLRPYLLRRLKADVEKQMPAKYEHILYCRLSKRQRFLYDDFM 939 Query: 1478 TKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYL 1582 ++ + T G S++N +MQLRKVCNHP L Sbjct: 940 SR--AQTKATLASGNFMSIINCLMQLRKVCNHPDL 972 Score = 136 bits (343), Expect = 4e-31 Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 6/182 (3%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +L+ L +GHR LIF+QMTK+LDILE +L + + R+DG+ + +RQ Sbjct: 1218 KLQSLAVLLRRLKEEGHRALIFTQMTKVLDILEQFLN--YHGYLYMRLDGATKIEDRQIL 1275 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LS+RS GLGINL ADTVI YDSD+NP D Q +R HRIGQ+ + Sbjct: 1276 TERFNTDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1335 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE------SQKEVEDIIRWGTEELFRNN 2173 +YR ++E IL+ A +K LD + + K E S+ V+D++ G++E Sbjct: 1336 HIYRFASEHTIESNILKKANQKRQLDNIVIQKGEFTTDYFSRLSVKDLL--GSDETEEIA 1393 Query: 2174 DE 2179 DE Sbjct: 1394 DE 1395
>Q6CA87:SWR1_YARLI Helicase SWR1 - Yarrowia lipolytica (Candida lipolytica)| Length = 1772 Score = 174 bits (442), Expect = 1e-42 Identities = 115/321 (35%), Positives = 162/321 (50%), Gaps = 19/321 (5%) Frame = +2 Query: 677 QPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINL 856 +P L G L +Q L WL + N ILADEMGLGKT+ + LS L CE I Sbjct: 900 EPPFLLRGTLRAYQQLGLEWLAGLYNNDTNGILADEMGLGKTIQTISLLSYLACEHHIWG 959 Query: 857 PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSH 1036 P L++VP S M NW EF +AP V+ Y+G+ R R+ W++ D Sbjct: 960 PHLIIVPTSVMLNWEMEFKRFAPGFKVMTYYGNPVQRREKRR-GWNKEDT---------- 1008 Query: 1037 KFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGT 1216 ++V +T+Y++VL D R W +I+DE H R+LLTGT Sbjct: 1009 -WHVCITSYQLVLQDLFAFRRKRWHYMILDEAHNIKNFRSQRWQSLLHFNTVRRLLLTGT 1067 Query: 1217 PLQNNIGEMYNLLNFLQPAS--------FPSLASFEEKFN-----------ELATAEKVE 1339 PLQNN+ E+++LL FL P+S F +L F+E F+ + V Sbjct: 1068 PLQNNLMELWSLLYFLMPSSRNQMDMPGFANLKDFQEWFSRPIDKMVEGGVDEEAKTTVS 1127 Query: 1340 ELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGG 1519 +L +++ P++LRRLKKD K +P K E +V L+ Q Y +++ R T K G Sbjct: 1128 KLHQILRPYLLRRLKKDVEKQMPAKYEHVVYCRLSKRQRYLYDDFMSR--AQTRETLKTG 1185 Query: 1520 AHQSLLNIVMQLRKVCNHPYL 1582 S++N +MQLRKVCNHP L Sbjct: 1186 NFLSIINCLMQLRKVCNHPDL 1206 Score = 134 bits (338), Expect = 1e-30 Identities = 72/154 (46%), Positives = 99/154 (64%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L ++L+ L + GHR LIF+QMTK+LD+LE +L + + R+DG+ + +RQ Sbjct: 1470 KLQRLATLLQDLIAGGHRALIFTQMTKVLDVLEQFLNIH--GLRYMRLDGATKIEQRQLL 1527 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LSTRS GLGINL ADTVI YDSD+NP D Q +R HRIGQ+ + Sbjct: 1528 TERFNTDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPSMDKQCQDRCHRIGQTRDV 1587 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 +YR V ++E IL+ A +K +LD + + E Sbjct: 1588 HIYRFVSEHTIESNILKKANQKQILDNVVIQDGE 1621
>Q5KHM0:INO80_CRYNE Putative DNA helicase INO80 - Cryptococcus neoformans (Filobasidiella| neoformans) Length = 1765 Score = 174 bits (442), Expect = 1e-42 Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 19/328 (5%) Frame = +2 Query: 656 ELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLC 835 E +V I QPK L L +QL+ L WL + + N ILADEMGLGKT+ + + L+ L Sbjct: 856 ENSVTITQPKMLMA-QLKEYQLKGLTWLGNLYEQGINGILADEMGLGKTIQSISLLAYLA 914 Query: 836 CEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQI 1015 + P LV+ P ST+ NW E A + P L + Y GS + R +R+ W + T Sbjct: 915 EHHNLWGPFLVIAPASTLHNWQQELARFVPRLKALPYWGSPKDRETLRKI-WSRKNQT-- 971 Query: 1016 GKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQH 1195 + F++L+T+Y++ + D YL+ + W+ +I+DE ++ Sbjct: 972 --FSEDSPFHILITSYQLAVQDEKYLQGMKWQYMILDEAQAIKSSSSARWKSLLSLHCRN 1029 Query: 1196 RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAE--------KVEELKK 1351 R+LLTGTP+QN++ E++ LL+F+ P F S F E F++ + K E+LK+ Sbjct: 1030 RLLLTGTPIQNSMHELWALLHFIMPQLFDSHEEFAEWFSKDIESSSGGVTGNLKPEQLKR 1089 Query: 1352 L---VAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM--------LTKNYQVL 1498 L + P MLRR+KK K + K E + V+L+ Q E Y+A+ L + Sbjct: 1090 LHMILKPFMLRRVKKHVQKELGDKIEIDLLVDLSQRQREIYKALRQRVSITDLLATAENN 1149 Query: 1499 RNTGKGGAHQSLLNIVMQLRKVCNHPYL 1582 + G +SL+N+VMQ RKVCNHP L Sbjct: 1150 TDNGNPKNMRSLVNLVMQFRKVCNHPDL 1177 Score = 154 bits (390), Expect = 1e-36 Identities = 82/166 (49%), Positives = 115/166 (69%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 SAKLA L S+L+ L + GHRVL++ QMTK++D++E+YL F + R+DGS +AER+ Sbjct: 1452 SAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEYLI--FRQYKYLRLDGSSPIAERR 1509 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 +T + + FVF LSTR+ GLGINL ADTVI YD D+NP +D QAM+RAHR+GQ+ Sbjct: 1510 DMVTSWQTNPDIFVFCLSTRAGGLGINLTAADTVIFYDHDWNPSSDAQAMDRAHRVGQTK 1569 Query: 2006 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIR 2143 ++ VYRLV R ++EERILQ+A+ K + + V K V D+ + Sbjct: 1570 QVTVYRLVARGTIEERILQMARGKKDIQDVVV----GTKSVSDVAK 1611
>Q05471:SWR1_YEAST Helicase SWR1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1514 Score = 174 bits (441), Expect = 2e-42 Identities = 112/347 (32%), Positives = 174/347 (50%), Gaps = 24/347 (6%) Frame = +2 Query: 614 RDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGL 793 +DV + ++L+V+ L G L +Q + LNWL + N ILADEMGL Sbjct: 666 KDVEEDAETKVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGL 725 Query: 794 GKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSA 973 GKT+ + L+ L CE + P L++VP S + NW EF +AP V+ Y+GS + R Sbjct: 726 GKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKE 785 Query: 974 IRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXX 1153 R+ W++ DA F+V + +Y++V+ D + W+ +++DE H Sbjct: 786 KRK-GWNKPDA-----------FHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFR 833 Query: 1154 XXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQP---------ASFPSLASFEEK 1306 Q R+LLTGTPLQNN+ E+++LL FL P + F L +F++ Sbjct: 834 STRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQW 893 Query: 1307 F---------------NELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVEL 1441 F + T + V +L +++ P++LRRLK D K +P K E +V +L Sbjct: 894 FGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKL 953 Query: 1442 TSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYL 1582 + Q Y +++ + T G S++N +MQLRKVCNHP L Sbjct: 954 SKRQRFLYDDFMSR--AQTKATLASGNFMSIVNCLMQLRKVCNHPNL 998 Score = 133 bits (334), Expect = 4e-30 Identities = 70/154 (45%), Positives = 98/154 (63%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +L+ L +GHR LIF+QMTK+LD+LE +L + + R+DG+ + +RQ Sbjct: 1247 KLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLN--YHGYLYMRLDGATKIEDRQIL 1304 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LS+RS GLGINL ADTVI YDSD+NP D Q +R HRIGQ+ + Sbjct: 1305 TERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1364 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 +YR V ++E IL+ A +K LD + + + + Sbjct: 1365 HIYRFVSEHTIESNILKKANQKRQLDNVVIQEGD 1398
>Q6FK48:SWR1_CANGA Helicase SWR1 - Candida glabrata (Yeast) (Torulopsis glabrata)| Length = 1450 Score = 174 bits (440), Expect = 2e-42 Identities = 109/319 (34%), Positives = 163/319 (51%), Gaps = 24/319 (7%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q + LNWL + + N ILADEMGLGKT+ + LS L CE P L++VP Sbjct: 626 GTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLSYLACEKHNWGPHLIVVP 685 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S + NW EF +AP V+ Y+G+ + R R+ W++ DA F+V + Sbjct: 686 TSVLLNWEMEFKRFAPGFKVLTYYGNPQQRKEKRK-GWNKPDA-----------FHVCIV 733 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++++ D + W+ +++DE H Q R+LLTGTPLQNNI Sbjct: 734 SYQLIVQDQHSFKRKKWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRILLTGTPLQNNIA 793 Query: 1238 EMYNLLNFLQP---------ASFPSLASFEEKF---------------NELATAEKVEEL 1345 E+++LL FL P + F L +F++ F + T VE+L Sbjct: 794 ELWSLLYFLMPQTVIDGQKVSGFADLDAFQQWFGRPVDKLIETGGTYEQDNETKRTVEKL 853 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH 1525 +++ P++LRRLK D K IP K E +V +L+ Q Y +++ + T G Sbjct: 854 HQVLRPYLLRRLKADVEKQIPGKYEHIVYCKLSKRQRFLYDDFMSR--AQTKATLASGNF 911 Query: 1526 QSLLNIVMQLRKVCNHPYL 1582 S++N +MQLRKVCNHP L Sbjct: 912 MSIVNCLMQLRKVCNHPDL 930 Score = 135 bits (341), Expect = 6e-31 Identities = 73/154 (47%), Positives = 97/154 (62%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +L+ L GHR LIF+QMTK+LDILE +L + + R+DG+ + +RQ Sbjct: 1179 KLQKLAILLQQLKDGGHRALIFTQMTKVLDILEQFLN--YHGYLYMRLDGATKIEDRQIL 1236 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LS+RS GLGINL ADTVI YDSD+NP D Q +R HRIGQ+ + Sbjct: 1237 TERFNSDPKITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1296 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 +YR V ++E IL+ A +K LD + + K E Sbjct: 1297 HIYRFVSEHTIESNILKKANQKRQLDDVIIQKGE 1330
>O12944:RAD54_CHICK DNA repair and recombination protein RAD54-like - Gallus gallus| (Chicken) Length = 733 Score = 174 bits (440), Expect = 2e-42 Identities = 151/543 (27%), Positives = 247/543 (45%), Gaps = 42/543 (7%) Frame = +2 Query: 701 MLFPHQLEALNWLRKCWFK-----SKNVILADEMGLGKTVSACAFLSSLC-----CEFKI 850 +L PHQ E + +L C S I+ADEMGLGKT+ + +L C+ +I Sbjct: 141 VLRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEI 200 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 +V+ P S + NW E W G AI E D +G + Sbjct: 201 E-KAMVVSPSSLVRNWYNEVEKWL---------GGRIQPLAIDGGSKEEIDRKLVGSMNQ 250 Query: 1031 SH---KFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 +L+ +YE + A L+ ++I DEGHR RV Sbjct: 251 RGLRVPSPILIISYETFRLHAEALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRV 310 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN---------------ELATAEKV 1336 L++GTP+QN++ E ++L++F+ + F+ F E++ Sbjct: 311 LISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERL 370 Query: 1337 EELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKG 1516 +EL +V ++RR K +P K E++V LT +QAE Y+ L K + + +G Sbjct: 371 KELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL-KQAKPVEELKEG 429 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPG--TEPESGSPEFLH---------EMRIKASAKLAL 1663 + S L+ + L+K+CNHP LI E E G L + + S K+ + Sbjct: 430 KINVSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALDLFPAGYSTKSVEPQLSGKMLV 489 Query: 1664 LHSMLKVLHSDGH-RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITR 1840 L +L V S + +V++ S T+ LD+ E + R+DG++S+ +R + R Sbjct: 490 LDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNR--RYLYVRLDGTMSIKKRAKVVER 547 Query: 1841 FNQDKT-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLV 2017 FN + F+F+LS+++ G G+NL A+ ++++D D+NP D QAM R R GQ + Sbjct: 548 FNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYI 607 Query: 2018 YRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWG-TEELFRNNDEVNGKD 2194 YRL+ ++EE+I Q K L V + +++VE G +ELF N+ Sbjct: 608 YRLLSTGTIEEKIFQRQTHKKALSSCVV---DEEQDVERHFSLGELKELFSLNETTISDT 664 Query: 2195 NDE 2203 +D+ Sbjct: 665 HDK 667
>P75093:Y020_MYCPN Uncharacterized ATP-dependent helicase MPN020 - Mycoplasma pneumoniae| Length = 1030 Score = 173 bits (439), Expect = 3e-42 Identities = 117/455 (25%), Positives = 216/455 (47%) Frame = +2 Query: 713 HQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMP 892 +Q E + W+R ILADEMGLGKTV L + +NLP L++VP S + Sbjct: 581 YQQEGVKWIRGLEENKFGGILADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPASLLL 640 Query: 893 NWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMV 1072 NW +EF +AP + V + ++ R + + +E +L+ ++ ++ Sbjct: 641 NWKSEFEKFAPQIKVKVANIPSKERGELYEKLTNE----------------ILIVSFNVL 684 Query: 1073 LVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNL 1252 D + + +++DE + LTGTP++N + ++++ Sbjct: 685 RSDVKLITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSC 744 Query: 1253 LNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVP 1432 +F+ P+ + F ++F + T + L + +P +LRR K +K +P K + Sbjct: 745 FDFVLPSFLGNKKQFTDQFEKEKTDQSFHLLMQRTSPFILRRTKSKVLKELPNKITTDIY 804 Query: 1433 VELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGS 1612 VEL + + Y + + ++ + ++L ++++LR +C+ P G Sbjct: 805 VELNPMHQKLYEEERDRGLEEIKQIQDKSSF-NILTLILKLRHLCSLPKNSQG------- 856 Query: 1613 PEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFER 1792 + E K A L ++H ++ + ++++F+Q ++D +D E G + F Sbjct: 857 ---ILENSAKKEAALEIIHEAIE----NQRKIILFTQFIDVIDHFKDTFK-EQGIEYFI- 907 Query: 1793 VDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1972 DG S R + I +FN K V L S ++ G+GINL A+ VI +D +N + QA Sbjct: 908 FDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEVVIHFDVWWNTAVENQA 967 Query: 1973 MNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 +RAHRIGQ + VYR++ + ++EER+ Q+ +K Sbjct: 968 TDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQAEK 1002
>P43610:YFK8_YEAST Uncharacterized ATP-dependent helicase YFR038W - Saccharomyces| cerevisiae (Baker's yeast) Length = 853 Score = 173 bits (438), Expect = 4e-42 Identities = 111/290 (38%), Positives = 154/290 (53%), Gaps = 21/290 (7%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 I+QP+ LK +L P+QLE LNWL + N ILADEMGLGKTV + A L+ + E Sbjct: 211 IKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFI-YEMDT 269 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P LV PLST+ NWM EFA +AP L V++Y+G+ + E A K+ Sbjct: 270 KGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGT---------NGYKERSAKLKNFFKQ 320 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 +++T+YE++L D + S W+ LIVDEGHR +R+LLT Sbjct: 321 HGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLT 380 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN----ELATAEKVEELKKLV------- 1357 GTPLQNN+ E+++LLNF+ P F F + F+ L + E L KL+ Sbjct: 381 GTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKN 440 Query: 1358 ---------APHMLRRLKKDAMKNI-PPKTERMVPVELTSIQAEYYRAML 1477 P +LRRLKK + NI PPK E ++ +TS Q ++Y+A L Sbjct: 441 LISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGL 490 Score = 145 bits (365), Expect = 1e-33 Identities = 82/197 (41%), Positives = 126/197 (63%), Gaps = 3/197 (1%) Frame = +2 Query: 1520 AHQSLLNIVMQLRKVCNHPYLI--PGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHS 1693 +++ L N++MQLR++ + +L P PE + E L +K S KL +L ++ L S Sbjct: 562 SNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETL----LKTSGKLQILQKLIPPLIS 617 Query: 1694 DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRF-VF 1870 +GH+VLI+SQ +LD++ED+ L A R+DGSV+ R+ + +FN K + +F Sbjct: 618 EGHKVLIYSQFVNMLDLIEDWCDLN--SFATFRIDGSVNNETRKDQLEKFNSSKDKHNIF 675 Query: 1871 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEE 2050 LLSTR+ GLGINL ADTV+++DSD+NP D+QAM+R HRIGQ + ++VYRL ++E Sbjct: 676 LLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEH 735 Query: 2051 RILQLAKKKLMLDQLFV 2101 IL A K L+++ + Sbjct: 736 VILTRAANKRNLERMVI 752
>Q92698:RAD54_HUMAN DNA repair and recombination protein RAD54-like - Homo sapiens| (Human) Length = 747 Score = 171 bits (432), Expect = 2e-41 Identities = 142/510 (27%), Positives = 237/510 (46%), Gaps = 39/510 (7%) Frame = +2 Query: 701 MLFPHQLEALNWLRKCWFK-----SKNVILADEMGLGKTVSACAFLSSLC-----CEFKI 850 +L PHQ E + +L +C S I+ADEMGLGKT+ + +L C+ +I Sbjct: 152 VLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEI 211 Query: 851 NLPCLVLVPLSTMPNWMAEFASW-APHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 + +V+ P S + NW E W + + G ++ + EG Q G Sbjct: 212 D-KAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKL----EGFMNQRGARV 266 Query: 1028 KSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLL 1207 S +L+ +YE + L+ ++I DEGHR RVL+ Sbjct: 267 SSP---ILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323 Query: 1208 TGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN-------ELATAE--------KVEE 1342 +GTP+QN++ E ++L++F+ + F++ F + A +E ++ E Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383 Query: 1343 LKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGA 1522 L +V ++RR K +P K E++V LT +Q E Y+ L + + +G Sbjct: 384 LTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFL-RQAKPAEELLEGKM 442 Query: 1523 HQSLLNIVMQLRKVCNHPYLIPG--TEPESGSPEFLH---------EMRIKASAKLALLH 1669 S L+ + L+K+CNHP LI E E G L + + S K+ +L Sbjct: 443 SVSSLSSITSLKKLCNHPALIYDKCVEEEDGFVGALDLFPPGYSSKALEPQLSGKMLVLD 502 Query: 1670 SMLKVLHS-DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFN 1846 +L V S +V++ S T+ LD+ E + R+DG++S+ +R + RFN Sbjct: 503 YILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRAR--RYLYVRLDGTMSIKKRAKVVERFN 560 Query: 1847 QDKTR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYR 2023 + FVF+LS+++ G G+NL A+ ++++D D+NP D QAM R R GQ +YR Sbjct: 561 SPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYR 620 Query: 2024 LVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 L+ ++EE+I Q K L V++ + Sbjct: 621 LLSAGTIEEKIFQRQSHKKALSSCVVDEEQ 650
>Q4P328:SWR1_USTMA Helicase SWR1 - Ustilago maydis (Smut fungus)| Length = 1830 Score = 170 bits (431), Expect = 2e-41 Identities = 104/326 (31%), Positives = 163/326 (50%), Gaps = 22/326 (6%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 ++QP L+G L P+Q WL + N ILADEMGLGKT+ + L+ L C+ + Sbjct: 980 LRQPFLLRG-QLRPYQQIGFEWLCSLYANGVNGILADEMGLGKTIQTISLLAHLACDKGV 1038 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P LV+ P S M NW EF + P ++ Y+G+ + R ++ W+ Sbjct: 1039 WGPHLVVAPTSVMLNWEVEFKKFLPGFKILSYYGNQKERKE-KRIGWN-----------T 1086 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 + FNV +T+Y++VL D R PW L++DE H Q R+LLT Sbjct: 1087 ENSFNVCITSYQLVLADQHIFRRKPWVYLVLDEAHHIKNFRSQRWQTLLGFNSQRRLLLT 1146 Query: 1211 GTPLQNNIGEMYNLLNFLQP---------ASFPSLASFEEKFNEL-------------AT 1324 GTPLQNN+ ++++L+ FL P +F ++ F++ F+ T Sbjct: 1147 GTPLQNNLMDLWSLMYFLMPNGATELPGGGAFANMKDFQDWFSNPLDKAIEGGTSMNDET 1206 Query: 1325 AEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRN 1504 V++L ++ P++LRRLK + K +P K E ++ L+ Q Y +++ R Sbjct: 1207 RAMVQKLHAVLRPYLLRRLKSEVEKELPSKYEHVITCRLSKRQRFLYNDFMSR--AKTRE 1264 Query: 1505 TGKGGAHQSLLNIVMQLRKVCNHPYL 1582 + G + S++N +MQLRKVCNHP L Sbjct: 1265 SLASGNYLSIINCLMQLRKVCNHPDL 1290 Score = 133 bits (334), Expect = 4e-30 Identities = 70/158 (44%), Positives = 101/158 (63%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +++ L GHR+LIF+QMT++LDILE +L + + R+DG+ V RQA Sbjct: 1534 KLQQLDILMRRLKEGGHRILIFTQMTRVLDILESFLN--YHGYRYLRLDGATKVESRQAL 1591 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 +FN+D F+LSTRS GLGINL ADTV+ YD D+N + Q M+RAHRIGQ+ + Sbjct: 1592 TEQFNRDARISAFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIGQTRDV 1651 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKE 2125 +YR V ++EE +L+ A +K +LD + + + E E Sbjct: 1652 HIYRFVTEHTIEENMLRKANQKRLLDNVVIQQGEFNTE 1689
>Q6CJ38:SWR1_KLULA Helicase SWR1 - Kluyveromyces lactis (Yeast) (Candida sphaerica)| Length = 1572 Score = 170 bits (431), Expect = 2e-41 Identities = 107/319 (33%), Positives = 163/319 (51%), Gaps = 24/319 (7%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q + LNWL + N ILADEMGLGKT+ + L+ L CE + P L++VP Sbjct: 763 GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S + NW EF +AP V+ Y+GS + R R+ W++ DA F+V +T Sbjct: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRK-GWNKPDA-----------FHVCIT 870 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++V+ D + W+ +I+DE H + R+LLTGTPLQNN+ Sbjct: 871 SYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930 Query: 1238 EMYNLLNFLQP---------ASFPSLASFEEKF---------------NELATAEKVEEL 1345 E+++LL FL P + F L +F++ F + T + V +L Sbjct: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKL 990 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH 1525 +++ P++LRRLK D K +P K E ++ L+ Q Y +++ + T G Sbjct: 991 HQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR--AQTKETLASGNF 1048 Query: 1526 QSLLNIVMQLRKVCNHPYL 1582 S++N +MQLRKVCNHP L Sbjct: 1049 MSIINCLMQLRKVCNHPDL 1067 Score = 134 bits (338), Expect = 1e-30 Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 18/215 (8%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +L+ L +GHR LIF+QMTK+LDILE +L F + R+DG+ + +RQ Sbjct: 1311 KLQKLAQLLQNLKDNGHRALIFTQMTKVLDILEQFLN--FHGYLYMRLDGATKIEDRQIL 1368 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LS+RS GLGINL ADTVI YDSD+NP D Q +R HRIGQ+ + Sbjct: 1369 TERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1428 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE------SQKEVEDIIRWGTEE----- 2158 +YR V ++E IL+ A +K LD + + + ++ V+D++ E Sbjct: 1429 HIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPEDIPDD 1488 Query: 2159 --LFRNNDEVN-----GKDNDEASDAKHDVSDIEV 2242 L ++ +N +D D+A AK + ++ V Sbjct: 1489 KPLLQDQKNLNKLLAQAEDEDDAKAAKSALREVNV 1523
>Q09772:RDH54_SCHPO Meiotic recombination protein rdh54 - Schizosaccharomyces pombe| (Fission yeast) Length = 811 Score = 170 bits (431), Expect = 2e-41 Identities = 147/572 (25%), Positives = 260/572 (45%), Gaps = 54/572 (9%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSK-----NVILADEMGLGKTVSACAFLSSLCCEF-------K 847 L+ HQ E +++L C + + ILADEMGLGKT+ + +L + Sbjct: 205 LYSHQREGVSFLYDCLLGMEGKCGYSAILADEMGLGKTLQTITVVWTLLKQSYYANRSST 264 Query: 848 INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 IN +V+ P++ + NW EF +W H + Y AR +++ Sbjct: 265 IN-NAMVVAPVTLLKNWENEFYNWLGHERIHVY--IARCAEDFQEFT------------- 308 Query: 1028 KSHKFNVLLTTYEMVLVDATYLRS----VPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQH 1195 + +++++T YE V TYLR+ + ++LI DE HR + Sbjct: 309 SNKTYSIIITGYETV---CTYLRNYGCGIDIDLLICDEAHRLKSMSSQTWITLNKLKTRK 365 Query: 1196 RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELAT---------------AE 1330 R+LLTGTPLQN++ E ++++NF+ P S + SF+ ++ A Sbjct: 366 RLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYERPILRSRSMNASSRDISLGAA 425 Query: 1331 KVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 +++ L + + LRR K++PP+T+ ++ ++ T Q Y +L + G Sbjct: 426 RLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQENVYGHVLDGFKSSVDQKG 485 Query: 1511 KGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPE------FLHEMRIKASAKLALLHS 1672 L I+ +L K+CN L+ + S E F E + +S+KL +L + Sbjct: 486 Y------YLKILTRLSKICNSTILLRNEKENFLSTELQDKHVFEQENMLLSSSKLQILAA 539 Query: 1673 MLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQD 1852 +LK + +I SQ + L+++E +L++ F ++ GS +ER + FN Sbjct: 540 LLKSFQRGCQKAVIVSQYKETLELIELFLSILH--VRFCKLLGSTPFSERDLIVHNFNTS 597 Query: 1853 --KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRL 2026 K V LLS+++ G G+NL + +IIY+ +NP D+QA++R +R GQ + +Y Sbjct: 598 SFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTF 657 Query: 2027 VVRASVEERILQLAKKKLMLDQLFVNKSESQK-------EVEDIIRWG------TEELFR 2167 + ++ERI K L F++ SQK +++ + + T EL Sbjct: 658 LSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSYSKTETCLTYELAF 717 Query: 2168 NNDEVNG--KDNDEASDAKHDVSDIEVKHRRK 2257 ++DE++ K D + H + K + K Sbjct: 718 DSDEIDSLTKKKDPLTKIDHTIDSPNTKEKDK 749
>P70270:RAD54_MOUSE DNA repair and recombination protein RAD54-like - Mus musculus| (Mouse) Length = 747 Score = 169 bits (428), Expect = 5e-41 Identities = 152/563 (26%), Positives = 255/563 (45%), Gaps = 49/563 (8%) Frame = +2 Query: 701 MLFPHQLEALNWLRKCWFK-----SKNVILADEMGLGKTVSACAFLSSLC-----CEFKI 850 +L PHQ E + +L +C S I+ADEMGLGKT+ + +L C+ +I Sbjct: 152 VLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEI 211 Query: 851 NLPCLVLVPLSTMPNWMAEFASW-APHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 +V+ P S + NW E W + + G ++ + EG Q G Sbjct: 212 E-KAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDEIDRKL----EGFMNQRGARV 266 Query: 1028 KSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLL 1207 S +L+ +YE + L+ ++I DEGHR RVL+ Sbjct: 267 PSP---ILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323 Query: 1208 TGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN-------ELATAE--------KVEE 1342 +GTP+QN++ E ++L++F+ + F++ F + A +E ++ E Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQRGEERLRE 383 Query: 1343 LKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAML--TKNYQVLRNTGKG 1516 L +V ++RR K +P K E++V LT +Q E Y+ L K + LR +G Sbjct: 384 LIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELR---EG 440 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLI-------------------PGTEPESGSPEFLHEMRI 1639 S L+ + L+K+CNHP LI PG ++ P+ Sbjct: 441 KMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIFPPGYNSKAVEPQL------ 494 Query: 1640 KASAKLALLHSMLKVLHS-DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 S K+ +L +L V S +V++ S T+ LD+ E + + R+DG++S+ Sbjct: 495 --SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVR--RYLYVRLDGTMSIK 550 Query: 1817 ERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1993 +R + RFN + FVF+LS+++ G G+NL A+ ++++D D+NP D QAM R R Sbjct: 551 KRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRD 610 Query: 1994 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNN 2173 GQ +YRL+ ++EE+I Q K L V + +++VE G + Sbjct: 611 GQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVV---DEEQDVERHFSLGELKELFTL 667 Query: 2174 DEVNGKDNDEASDAKHDVSDIEV 2242 DE + D + + V++ +V Sbjct: 668 DEASLSDTHDRLHCRRCVNNRQV 690
>Q4PGL2:INO80_USTMA Putative DNA helicase INO80 - Ustilago maydis (Smut fungus)| Length = 1910 Score = 169 bits (428), Expect = 5e-41 Identities = 109/319 (34%), Positives = 172/319 (53%), Gaps = 15/319 (4%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 I+QPK L L +QL+ LNWL + + N ILADEMGLGKTV + + ++ L I Sbjct: 988 IKQPKMLTC-QLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISLMAYLAEVHDI 1046 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 P LV+ P ST+ NW E + + P L + Y G+ + R+ +R++ W+ QI ++ Sbjct: 1047 WGPFLVIAPASTLHNWQQEISKFVPTLKALPYWGNVKDRAVLRKF-WNR---KQISYNRD 1102 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 + F+VL+T+Y++V+ D Y + V W+ +I+DE ++R+LLT Sbjct: 1103 A-PFHVLVTSYQLVVSDEKYFQRVKWQYMILDEAQAIKSSSSIRWKTLLGFNCRNRLLLT 1161 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE----------LATAEKVEELKKLVA 1360 GTP+QN++ E++ LL+F+ P+ F S F E F++ ++ L ++ Sbjct: 1162 GTPVQNSMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAEQKGTLNEHQLRRLHMILK 1221 Query: 1361 PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH----- 1525 P MLRR+KK+ + K E V +L++ Q YR L N V + ++ Sbjct: 1222 PFMLRRIKKNVQNELGDKIEIDVFCDLSARQKMLYRG-LRANISVAELMDRATSNDEAGL 1280 Query: 1526 QSLLNIVMQLRKVCNHPYL 1582 +SL+N+VMQ RKVCNHP L Sbjct: 1281 KSLMNLVMQFRKVCNHPEL 1299 Score = 145 bits (365), Expect = 1e-33 Identities = 87/255 (34%), Positives = 141/255 (55%), Gaps = 8/255 (3%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S+KLA L +L+ L ++GHRVLI+ QMT+++D++E+YL + + R+DG+ +++R+ Sbjct: 1578 SSKLAKLDVLLRELKANGHRVLIYFQMTRMIDLMEEYLI--YRQYKYLRLDGASKISDRR 1635 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 +T + F+FLLSTR+ GLGINL ADTVI YD D+NP D QAM+RAHR+GQ+ Sbjct: 1636 DMVTDWQTKPELFIFLLSTRAGGLGINLTAADTVIFYDHDWNPSNDSQAMDRAHRLGQTK 1695 Query: 2006 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSESQKEVEDIIRWGTEELFRNN 2173 ++ VYRL+ + +++ERI++LA+ K + + V + ++I+ ++ Sbjct: 1696 QVTVYRLITKGTIDERIVRLARNKKEVQDIVVGTKAYSETGMAKPQEIVSLLLDDDELAE 1755 Query: 2174 DEVNGKDNDEASDAKHDVSDIEVKHRR----KTGGLGDVYEDKCIGSSTKLIWDENAIMR 2341 + K +EA A+ H + K V +GS+ L DE+ Sbjct: 1756 SMLRKKQAEEAQTAQEKADLARASHAKRRLNKDRAAAAVESPAPVGSTWSLEDDEDDFFG 1815 Query: 2342 LLDRSSLPTTVAEST 2386 S T AE+T Sbjct: 1816 ARPPSKADTDTAETT 1830
>Q6BKC2:SWR1_DEBHA Helicase SWR1 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii)| Length = 1616 Score = 168 bits (425), Expect = 1e-40 Identities = 110/333 (33%), Positives = 162/333 (48%), Gaps = 38/333 (11%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L P+Q + LNWL + N ILADEMGLGKT+ + L+ L E I P L++VP Sbjct: 779 GTLRPYQKQGLNWLASLYNNGTNGILADEMGLGKTIQTISLLAYLAAEHHIWGPHLIVVP 838 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S M NW EF +AP V+ Y+GS + R+ R+ W+ K + F+V +T Sbjct: 839 TSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRK-GWN-----------KPNAFHVCIT 886 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++V+ D + W +I+DE H ++R+LLTGTPLQNN+ Sbjct: 887 SYQLVVHDHQSFKRRRWRYMILDEAHNIKNFRSARWRALLNFNTENRLLLTGTPLQNNLM 946 Query: 1238 EMYNLLNFLQPAS---------FPSLASFEEKFN-------------------------- 1312 E+++LL FL P+S F +L F+ F Sbjct: 947 ELWSLLYFLMPSSKVNQAMPDGFANLEDFQTWFGRPVDKILEKTSNGTSSDVIDENDKTT 1006 Query: 1313 ---ELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK 1483 + T V L +++ P++LRRLKKD K +P K E ++ L+ Q Y +++ Sbjct: 1007 QRMDEETRNTVSRLHQVLRPYLLRRLKKDVEKQMPGKYEHIIYCRLSKRQRYLYDDFMSR 1066 Query: 1484 NYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYL 1582 + T G S++N +MQLRKVCNHP L Sbjct: 1067 --AQTKETLASGNFLSIINCLMQLRKVCNHPDL 1097 Score = 137 bits (346), Expect = 2e-31 Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L ++L+ L ++GHR LIF+QMTK+LDILE +L + + R+DG+ + +RQ Sbjct: 1333 KLQKLATLLQDLTANGHRALIFTQMTKVLDILEQFLNIH--GYRYMRLDGATKIEDRQLL 1390 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 +FN+D VF+LSTRS GLGINL ADTVI YDSD+NP D Q +R HRIGQS + Sbjct: 1391 TEKFNRDSKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQSRDV 1450 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE---------------SQKEVEDIIRW 2146 +YR V ++E IL+ A +K LD + + + E + EV DI Sbjct: 1451 HIYRFVSEYTIESNILRKANQKRQLDNVVIQEGEFTTDYFGKFSVKDLVNDAEVADIPDK 1510 Query: 2147 GTEELFRNNDEVNGKDNDE 2203 E + N + V + DE Sbjct: 1511 PLEPAYGNVENVLAQAEDE 1529
>O13682:SWR1_SCHPO Helicase swr1 - Schizosaccharomyces pombe (Fission yeast)| Length = 1288 Score = 167 bits (423), Expect = 2e-40 Identities = 107/315 (33%), Positives = 158/315 (50%), Gaps = 20/315 (6%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q L WL + N ILADEMGLGKT+ A L+ L CE + P L++VP Sbjct: 445 GTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGPHLIIVP 504 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S M NW EF + P ++ Y+G+ + R R W++ D ++V +T Sbjct: 505 TSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRS-GWYKPDT-----------WHVCIT 552 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++VL D R W+ +I+DE H +HR+LLTGTPLQNN+ Sbjct: 553 SYQLVLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLV 612 Query: 1238 EMYNLLNFLQPA-------SFPSLASFEEKFNE-------------LATAEKVEELKKLV 1357 E+++LL FL PA +F +L F++ F++ V +L +++ Sbjct: 613 ELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVL 672 Query: 1358 APHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLL 1537 P++LRRLK + K +P K E +V +L+ Q Y + N R G S++ Sbjct: 673 RPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFI--NRARTREILASGNFMSII 730 Query: 1538 NIVMQLRKVCNHPYL 1582 N +MQLRKVCNHP L Sbjct: 731 NCLMQLRKVCNHPNL 745 Score = 148 bits (374), Expect = 9e-35 Identities = 86/186 (46%), Positives = 116/186 (62%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL +L +LK L S+GHRVLIF+QMTK+LDILE +L + + R+DG+ + +RQ Sbjct: 992 KLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIH--GHRYLRLDGATKIEQRQIL 1049 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LSTRS GLGINL ADTVI YDSD+NP D QA +R+HRIGQ+ + Sbjct: 1050 TERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDV 1109 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGK 2191 +YRL+ +VE +L+ A +K MLD++ + E T E FR D ++ Sbjct: 1110 HIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEF-----------TTEWFRKADVLDLF 1158 Query: 2192 DNDEAS 2209 D D+ S Sbjct: 1159 DLDDES 1164
>Q4WAS9:SWR1_ASPFU Helicase swr1 - Aspergillus fumigatus (Sartorya fumigata)| Length = 1695 Score = 166 bits (421), Expect = 3e-40 Identities = 116/353 (32%), Positives = 169/353 (47%), Gaps = 22/353 (6%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q L+WL + N ILADEMGLGKT+ A L+ L E ++ P LV+VP Sbjct: 828 GTLREYQHYGLDWLAGLYNNHINGILADEMGLGKTIQTIALLAHLAVEHEVWGPHLVVVP 887 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S + NW EF W P ++ Y+GS R R+ W + + +NVL+T Sbjct: 888 TSVILNWEMEFKKWCPGFKIMTYYGSIEERRQKRK-GWTDDTS-----------WNVLIT 935 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++VL D L+ W +++DE H + R+LLTGTPLQNN+ Sbjct: 936 SYQLVLQDQQVLKRRNWHYMVLDEAHNIKNFRSQKWQTLLTFRTRARLLLTGTPLQNNLT 995 Query: 1238 EMYNLLNFLQPA--------SFPSLASFEEKFN--------------ELATAEKVEELKK 1351 E+++LL FL P+ F L +F E F + T V +L Sbjct: 996 ELWSLLFFLMPSDGDGTGIEGFADLRNFSEWFRRPVEQILEHGRETMDDETKRVVTKLHT 1055 Query: 1352 LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQS 1531 ++ P++LRRLK D K +P K E +V L+ Q Y + + + T G + S Sbjct: 1056 ILRPYILRRLKADVEKQMPAKYEHVVYCRLSKRQRFLYDGFM--SMAQTKETLASGNYLS 1113 Query: 1532 LLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLH 1690 ++N +MQLRKVCNHP L T S S H + + ++K L+ L H Sbjct: 1114 IINCLMQLRKVCNHPDLFE-TRQISTSFVMHHSVATEYASKEQLVRRRLLYEH 1165 Score = 137 bits (344), Expect = 3e-31 Identities = 73/154 (47%), Positives = 98/154 (63%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +L+ L + GHR LIF+QMTK+LDILE +L + + R+DG+ V +RQ Sbjct: 1379 KLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH--GHRYLRLDGTTKVEQRQIL 1436 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D VF+LS+RS GLGINL ADTVI YD D+NP D Q +R HRIGQ+ + Sbjct: 1437 TDRFNNDDRILVFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDV 1496 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 +YR V ++E IL+ A +K MLD + + + E Sbjct: 1497 HIYRFVSEHTIESNILRKANQKRMLDDVVIQEGE 1530
>Q5ARK3:SWR1_EMENI Helicase swr1 - Emericella nidulans (Aspergillus nidulans)| Length = 1656 Score = 165 bits (417), Expect = 1e-39 Identities = 115/353 (32%), Positives = 166/353 (47%), Gaps = 22/353 (6%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q L+WL + N ILADEMGLGKT+ A L+ L E + P LV+VP Sbjct: 781 GTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLVVVP 840 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 S + NW EF W P ++ Y+G+ R R+ W + + +NVL+T Sbjct: 841 TSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRR-GWMD-----------DNSWNVLIT 888 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y++VL D L+ W +I+DE H + R+LLTGTPLQNN+ Sbjct: 889 SYQLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLT 948 Query: 1238 EMYNLLNFLQPA--------SFPSLASFEEKFN--------------ELATAEKVEELKK 1351 E+++LL FL P F L +F E F + + V +L Sbjct: 949 ELWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHT 1008 Query: 1352 LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQS 1531 ++ P++LRRLK D K +P K E +V L+ Q Y +++ + T G + S Sbjct: 1009 VLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSR--AQTKETLASGNYLS 1066 Query: 1532 LLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLH 1690 ++N +MQLRKVCNHP L T P S S + + AL+ L H Sbjct: 1067 IINCLMQLRKVCNHPDLFE-TRPISTSFAMPRSVATEFETSEALVRRRLLYQH 1118 Score = 136 bits (343), Expect = 4e-31 Identities = 86/218 (39%), Positives = 120/218 (55%), Gaps = 6/218 (2%) Frame = +2 Query: 1652 KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 KL L +L+ L + GHR LIF+QMTK+LD+LE +L + + R+DG+ V +RQ Sbjct: 1332 KLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIH--GHRYLRLDGTTKVEQRQIL 1389 Query: 1832 ITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRL 2011 RFN D F+LS+RS GLGINL ADTVI YD D+NP D Q +R HRIGQ+ + Sbjct: 1390 TDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDV 1449 Query: 2012 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE------SQKEVEDIIRWGTEELFRNN 2173 +YR V ++E IL+ A +K MLD + + + E ++ +V D+I N Sbjct: 1450 HIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEFTTDYFTKLDVRDMI---------GN 1500 Query: 2174 DEVNGKDNDEASDAKHDVSDIEVKHRRKTGGLGDVYED 2287 DE DEAS A V + V + + + ED Sbjct: 1501 DEAL---KDEASAAMDRVLENRVTNTSRVFEQAEDKED 1535
>Q5K8T2:SWR1_CRYNE Helicase SWR1 - Cryptococcus neoformans (Filobasidiella neoformans)| Length = 1246 Score = 163 bits (412), Expect = 4e-39 Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 25/329 (7%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 ++QP L+G L P+Q L WL W + N ILADEMGLGKT+ A L L C+ + Sbjct: 383 VRQPFLLRG-TLRPYQQAGLEWLASLWSNNMNGILADEMGLGKTIQTIALLGHLACDKGV 441 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKK 1030 L++VP S + NW EF + P + V+ Y+G+ + R ++ WH + Q Sbjct: 442 WGQHLIIVPTSVILNWEMEFKKFLPGMKVLTYYGNQKERKE-KRVGWHTENTWQ------ 494 Query: 1031 SHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 V +T+Y++VL D R W +I+DE H Q R+LLT Sbjct: 495 -----VCITSYQIVLADQHIFRRKNWCYMILDEAHNIKNFRSQRWQTLLGFKAQRRLLLT 549 Query: 1211 GTPLQNNIGEMYNLLNFLQP----------ASFPSLASFEEKFN-------------ELA 1321 GTPLQNN+ E+++LL FL P F + F E F+ + Sbjct: 550 GTPLQNNLMELWSLLYFLMPGGIGADATAVVGFANHKEFMEWFSNPMDKAIETGDAMDEE 609 Query: 1322 TAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTK--NYQV 1495 T E V +L L+ P +LRRLK + +P K E +V L+ Q Y +++ ++ Sbjct: 610 TLETVAKLHTLLRPFILRRLKSEVETQLPGKFEHVVYCRLSKRQRFLYDEFMSRASTHEA 669 Query: 1496 LRNTGKGGAHQSLLNIVMQLRKVCNHPYL 1582 L G + ++N +MQLRKVCNHP L Sbjct: 670 LTT----GGYLGVMNTLMQLRKVCNHPDL 694 Score = 146 bits (369), Expect = 4e-34 Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 19/196 (9%) Frame = +2 Query: 1577 YLIPGTEPESG----SPEF--LHEMRIKAS-------------AKLALLHSMLKVLHSDG 1699 Y +PG EP S P F LH +K KL L ML+ L S+G Sbjct: 895 YALPGLEPISHPALTDPAFDTLHRSSVKLQIAFPDASLLQYDCGKLQKLFEMLRDLKSEG 954 Query: 1700 HRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLS 1879 HRVLIF+QMT++LDILE +L+ + R+DGS + +RQ RFN D FVF+ S Sbjct: 955 HRVLIFTQMTRVLDILEMFLS--HNGHRYLRLDGSTKIEDRQVLTERFNSDSRIFVFIAS 1012 Query: 1880 TRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL 2059 +RS G+GINL ADTV YDSD+NP D Q M+RAHRIGQ+ + +YR V +VEE +L Sbjct: 1013 SRSGGVGINLTGADTVFFYDSDWNPSMDRQCMDRAHRIGQTREVHIYRFVSSHTVEENML 1072 Query: 2060 QLAKKKLMLDQLFVNK 2107 + A++K +LD++ + + Sbjct: 1073 RKAEQKRLLDKMVIQE 1088
>Q8CHI8:EP400_MOUSE E1A-binding protein p400 - Mus musculus (Mouse)| Length = 3072 Score = 138 bits (347), Expect = 1e-31 Identities = 128/456 (28%), Positives = 201/456 (44%), Gaps = 30/456 (6%) Frame = +2 Query: 344 SELRTLAKRK----LENYKAKYGMGLINICKDQWCQPQRVIALRVSLDEVEEALIKWYGL 511 +EL LAK ++ K G L N QW QP+ ++VE+ Sbjct: 969 TELTNLAKEAELPLIDLMKLYEGAFLPNF---QWPQPEPDHEESSGEEDVEDC------- 1018 Query: 512 PYDECTWERLDEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARNRQELTVLIQQ--PK 685 P D E + +++ + ++ QFK E ++ + +N ++ E+T + + PK Sbjct: 1019 PSDR---ESRRDSVLIDSLFIMDQFKAAERMSIGK------SNTKDITEVTAVAEAILPK 1069 Query: 686 --------------ELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFL 823 L G L +Q L+WL K + K+ N ILADE GLGKTV AF Sbjct: 1070 GSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFF 1129 Query: 824 SSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGD 1003 + L C P LV++ + W E W P L + Y GS R A RQ EW E Sbjct: 1130 AHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQ-EWTE-- 1186 Query: 1004 ATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXX 1183 + F++ +T+Y+ T V W+ L+VDE R Sbjct: 1187 ---------PNNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKL 1237 Query: 1184 XXQHRVLLTGTPLQNNIGEMYNLLNFLQPA------SFPSLASFEEKFNELATAEKVEEL 1345 Q R+LL PL N E++ +++FL P SFP A EE N+ + V L Sbjct: 1238 QSQQRLLLIDVPLHNTFLELWTMVHFLIPGISRPYLSFPLKAPNEE--NQDYYHKMVIRL 1295 Query: 1346 KKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAH 1525 ++ P +LRR K+D K + K E ++ L+S Q Y ++ + + K G Sbjct: 1296 HRVTQPFILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDVILQ--PRTQEALKSGHF 1353 Query: 1526 QSLLNIVMQLRKVCNHPYL----IPGTEPESGSPEF 1621 S+L+++ +L+++CNHP L +PG+ +GS ++ Sbjct: 1354 VSVLSVLTRLQRICNHPGLVEPRVPGSSFAAGSLQY 1389 Score = 108 bits (271), Expect = 8e-23 Identities = 62/146 (42%), Positives = 87/146 (59%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S KL L +L+ L S+G RVLI SQM +LDILE +L + + R+D + + +RQ Sbjct: 1813 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHY--LTYVRIDENANSEQRQ 1870 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 + FN+D+ F LLST S GINL ADTV+ YD+D NP D +A RIG+ Sbjct: 1871 ELMRSFNRDRRIFCALLSTHSRATGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCK 1930 Query: 2006 RLLVYRLVVRASVEERILQLAKKKLM 2083 + +YRLV S+EE++L+ K L+ Sbjct: 1931 DIHIYRLVSGNSIEEKLLKNGTKDLI 1956
>O10302:GTA_NPVOP Probable global transactivator - Orgyia pseudotsugata multicapsid| polyhedrosis virus (OpMNPV) Length = 498 Score = 137 bits (345), Expect = 2e-31 Identities = 123/479 (25%), Positives = 215/479 (44%), Gaps = 11/479 (2%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSK--NVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 L HQ + W+R+ + + +LAD+MGLGKT+S +++ + L++ P Sbjct: 29 LLEHQKRGIEWMRRRERRGRPHGGVLADDMGLGKTLSVMRLIAN---DGDDAHKTLIVCP 85 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 LS + +W AE LN+ ++HG S ++ + A + HK Sbjct: 86 LSLLNHWTAEAKKHNLPLNLRQFHGGDLDES----FDDAKAVAITYDTLRAHHK------ 135 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 + A+ L + W +++DE H +R +TGTP+ N Sbjct: 136 -HYKTAGRASGLLARHWHRVVLDEAHVIKNHQTGVHAAACALSADNRWCITGTPIHNRHW 194 Query: 1238 EMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKT 1417 +MY +++FL+ F ++ + L +K +V +L+R K + +IP Sbjct: 195 DMYAIIHFLRCRPFDNVGVWRM----LNRNNDTNRIKSVVNKIVLKRNKAEIALDIPQHD 250 Query: 1418 ERMVPVELTSIQAEYYRAMLTKNYQV----LRNTGKGGAHQSLLNIVMQLRKVCNHPYLI 1585 + V V +A Y + + + + + + K G Q +L ++ +LR+VC HP L Sbjct: 251 VQDVHVRFDEAEARVYNELKSASQRAYDDAVASADKAGGMQDVLWLLCRLRQVCCHPAL- 309 Query: 1586 PGTEPESGSPEFLH--EMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYL 1759 T+ + PE H E ++S L + +VL + +V++ SQ + L ++ L Sbjct: 310 --TKCAAMFPEHAHIFEPAYESSKCRRALELVQRVLDTPDDKVVLVSQWVEFLQLVAGLL 367 Query: 1760 TLEFGPKAFERVDGSVSVAERQAAITRFNQ-DKTRFVFLLSTRSCGLGINLATADTVIIY 1936 P G + V ER A +FN D V L+S + G+G+NL + +I+ Sbjct: 368 RRRGVPILL--YTGQLRVEERTAVENQFNAADSPYRVLLMSIKCGGVGLNLTGGNHIIML 425 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV--RASVEERILQLAKKKLMLDQLFVNK 2107 + +NP ++QA +R HR+GQ R VY+++V S+E + KKL FVNK Sbjct: 426 EPHWNPQIELQAQDRIHRMGQKKRTYVYKMIVDEENSIERYMKARQDKKL----TFVNK 480
>P41447:GTA_NPVAC Probable global transactivator - Autographa californica nuclear| polyhedrosis virus (AcMNPV) Length = 506 Score = 135 bits (340), Expect = 8e-31 Identities = 120/508 (23%), Positives = 225/508 (44%), Gaps = 30/508 (5%) Frame = +2 Query: 704 LFPHQLEALNWL--RKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 L HQ + + W+ R+ + +LAD+MGLGKT+S ++ + L L++ P Sbjct: 30 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK---NNSLQLKTLIVCP 86 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 LS + +W+ E + N+++Y+ S A + +++++T Sbjct: 87 LSLINHWVTENKKHDLNFNILKYYKSLDADTV--------------------EHYHIVVT 126 Query: 1058 TYEMVLVDATYLR--------SVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTG 1213 TY+++L ++ S W +++DE H +R +TG Sbjct: 127 TYDVLLAHFKLIKQNKQSSLFSTRWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITG 186 Query: 1214 TPLQNNIGEMYNLLNFLQ--PASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKK 1387 TP+ N +MY+++NFLQ P + P + K N+ +K ++ +L+R K Sbjct: 187 TPIHNKHWDMYSMINFLQCRPFNNPRVWKMLNKNND-----STNRIKSIIKKIVLKRDKS 241 Query: 1388 DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLN--------- 1540 + NIP T V V + Y + ++ + +++ L+ Sbjct: 242 EISSNIPKHTVEYVHVNFNEEEKTLYDKLKCESEEAYVKAVAARENENALSRLQQMQHVL 301 Query: 1541 -IVMQLRKVCNHPYLIPGTEP--ESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVL 1711 ++++LR++C HPYL + E+ + M K L L+ +L++ +++ Sbjct: 302 WLILKLRQICCHPYLAMHGKNILETNDCFKMDYMSSKCKRVLDLVDD---ILNTSNDKII 358 Query: 1712 IFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ--DKTRFVFLLSTR 1885 + SQ + L I E++ + A G + V +R A T FN + + LLS + Sbjct: 359 LVSQWVEYLKIFENFFKQK--NIATLMYTGQLKVEDRILAETTFNDAANTQHRILLLSIK 416 Query: 1886 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRL--VVRASVEERIL 2059 G+G+NL + +++ + +NP ++QA +R R+GQ+ VY++ V S+E+ I Sbjct: 417 CGGVGLNLIGGNHIVMLEPHWNPQIELQAQDRISRMGQTKNTYVYKMLNVEDNSIEKYIK 476 Query: 2060 QLAKKKLMLDQLFVNK--SESQKEVEDI 2137 Q KK+ FVN E+ EDI Sbjct: 477 QRQDKKI----AFVNTVFEETLLNYEDI 500
>Q96L91:EP400_HUMAN E1A-binding protein p400 - Homo sapiens (Human)| Length = 3160 Score = 133 bits (334), Expect = 4e-30 Identities = 96/309 (31%), Positives = 145/309 (46%), Gaps = 6/309 (1%) Frame = +2 Query: 698 GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVP 877 G L +Q L+WL K + K+ N ILADE GLGKTV AF + L C P LV+V Sbjct: 1089 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1148 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 + W E W P L ++ Y GS R A RQ EW E + F+V +T Sbjct: 1149 SCNILKWELELKRWCPGLKILSYIGSHRELKAKRQ-EWAE-----------PNSFHVCIT 1196 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +Y T V W+ L++DE R Q R+LL +PL N Sbjct: 1197 SYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFL 1256 Query: 1238 EMYNLLNFLQPA------SFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMK 1399 E++ +++FL P S P A EE ++ + V L ++ P +LRR K+D K Sbjct: 1257 ELWTMVHFLVPGISRPYLSSPLRAPSEE--SQDYYHKVVIRLHRVTQPFILRRTKRDVEK 1314 Query: 1400 NIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPY 1579 + K E ++ L++ Q Y ++ + + K G ++L+I+++L+++CNHP Sbjct: 1315 QLTKKYEHVLKCRLSNRQKALYEDVILQ--PGTQEALKSGHFVNVLSILVRLQRICNHPG 1372 Query: 1580 LIPGTEPES 1606 L+ P S Sbjct: 1373 LVEPRHPGS 1381 Score = 108 bits (269), Expect = 1e-22 Identities = 62/146 (42%), Positives = 87/146 (59%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S KL L +L+ L S+G RVLI SQM +LDILE +L + + R+D + S +RQ Sbjct: 1897 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHY--LTYVRIDENASSEQRQ 1954 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 + FN+D+ F +LST S GINL ADTV+ YD+D NP D +A RIG+ Sbjct: 1955 ELMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCK 2014 Query: 2006 RLLVYRLVVRASVEERILQLAKKKLM 2083 + +YRLV S+EE++L+ K L+ Sbjct: 2015 DIHIYRLVSGNSIEEKLLKNGTKDLI 2040
>Q5FWF4:ZRAB3_HUMAN Zinc finger Ran-binding domain-containing protein 3 - Homo sapiens| (Human) Length = 1079 Score = 127 bits (319), Expect = 2e-28 Identities = 118/499 (23%), Positives = 216/499 (43%), Gaps = 18/499 (3%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L P Q + + + K ++ ++ADEMGLGKT+ A + +K P L++VP S Sbjct: 37 LLPFQKDGIIFALK---RNGRCMVADEMGLGKTIQAIG----ITYFYKEEWPLLIVVPSS 89 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W E W P L+ E + ++ D ++ SK + LLT Sbjct: 90 LRYPWTEEIEKWIPELSPEEINVIQ-----------NKTDVRRMSTSKVTVLGYGLLTAD 138 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR--VLLTGTPLQNNIG 1237 L+DA L + ++V+IVDE H + R +LLTGTP Sbjct: 139 AKTLIDA--LNNQNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPE 196 Query: 1238 EMYNLLNFLQPASFPSLASFEEKFN-------------ELATAEKVEELKKLVAPHMLRR 1378 E++ + L P F + +++ + A + EL +L++ M+RR Sbjct: 197 ELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLLSDIMIRR 256 Query: 1379 LKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLR 1558 LK + + +PPK + +P +L S A+ + +++R T GA ++++ ++ ++ Sbjct: 257 LKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMR-TPNSGAMETVMGLITRMF 315 Query: 1559 KVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKV-LHSDGHRVLIFSQMTKL 1735 K A AK + +K+ L +D + L+F+ + Sbjct: 316 KQT-------------------------AIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSM 350 Query: 1736 LDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLAT 1915 L + + + R+DGSVS +ER + +F +D V +LS ++ G G+ Sbjct: 351 LQACTEAVIEN--KTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTA 408 Query: 1916 ADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQL 2095 A V+ + ++P QA +RAHRIGQ + + ++ L+ +++ + + +K + Sbjct: 409 ASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGS 468 Query: 2096 FVN--KSESQKEVEDIIRW 2146 +N K + Q E D +W Sbjct: 469 TLNGRKEKIQAEEGDKEKW 487
>Q6NZP1:ZRAB3_MOUSE Zinc finger Ran-binding domain-containing protein 3 - Mus musculus| (Mouse) Length = 1069 Score = 126 bits (316), Expect = 5e-28 Identities = 114/478 (23%), Positives = 205/478 (42%), Gaps = 18/478 (3%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYH 949 ++ADEMGLGKT+ A A + +K P L++VP S W+ E W P L E + Sbjct: 56 MVADEMGLGKTIQAIA----IAYFYKEEWPLLIVVPSSLRYPWIEELEKWIPELEPEEIN 111 Query: 950 GSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDE 1129 ++ D +I S+ + LLTT L+DA L + + V+IVDE Sbjct: 112 -----------VVMNKTDIGRIPGSRVTVLGYGLLTTDAETLLDA--LNTQNFRVVIVDE 158 Query: 1130 GHRXXXXXXXXXXXXXXXXXQHR--VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE 1303 H + R +LLTGTP E++ + L P F + + + Sbjct: 159 SHYMKSRTAARSKILLPMVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGTWIEYAK 218 Query: 1304 KFN-------------ELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELT 1444 ++ + A + EL +L+ M+RRLK + + +PPK + +P +L Sbjct: 219 RYCNAHVRYFGKRRQWDCRGASNLSELHQLLNDIMIRRLKSEVLSQLPPKVRQRIPFDLP 278 Query: 1445 SIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFL 1624 + A + +Q L GA ++++ ++ ++ K Sbjct: 279 PAAVKELNASF-EEWQKLMRAPNSGAMETVMGLITRMFKQT------------------- 318 Query: 1625 HEMRIKASAKLALLHSMLKVL-HSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDG 1801 A AK + +K+L +D + L+F+ +L + + + R+DG Sbjct: 319 ------AIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIES--KSRYIRIDG 370 Query: 1802 SVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1981 SV +ER + +F +D V +LS ++ G G+ A V+ + ++P QA +R Sbjct: 371 SVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDR 430 Query: 1982 AHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--KSESQKEVEDIIRWG 2149 AHRIGQ + + ++ L+ +++ + + +K + +N K + Q +D +WG Sbjct: 431 AHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQATEDDKEKWG 488
>Q8BJL0:SMAL1_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A-like protein 1 - Mus musculus (Mouse) Length = 910 Score = 123 bits (309), Expect = 3e-27 Identities = 123/514 (23%), Positives = 219/514 (42%), Gaps = 29/514 (5%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L P Q E +++ K ++LAD+MGLGKTV A + ++ P LV+VP S Sbjct: 395 LMPFQREGVSFAIS---KRGRLLLADDMGLGKTVQAIC----IAAFYRKEWPLLVVVPSS 447 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W F W P L+ + GK + + V + ++ Sbjct: 448 VRFTWEQAFLRWLPSLSPENIN------------------VVVTGKGRLTAGL-VNIVSF 488 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGH--RXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 +++ L++ P++V+I+DE H + + +LL+GTP + Sbjct: 489 DLLCKLERQLKT-PFKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGTPAMSRPA 547 Query: 1238 EMYNLLNFLQPASFPSLASFEEKFNEL---------ATAEKVEELKKLVAPH-MLRRLKK 1387 E+Y + ++P FP +F ++ + + + + ELK L+ MLRRLK Sbjct: 548 ELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGSSNLGELKLLLEEAIMLRRLKS 607 Query: 1388 DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVC 1567 D + +P K +MV V I + A+ ++ ++ K ++LL + Sbjct: 608 DVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKDKTKQQQKEALLVFFNRT---- 663 Query: 1568 NHPYLIPGTEPESGSPEFLHEMRIKASAKL-ALLHSMLKVLHSDGHRVLIFSQMTKLLDI 1744 A AK+ ++ +L +L S + L+F+ +LD Sbjct: 664 -------------------------AEAKIPCVVEYILDLLDSGREKFLVFAHHKVILDA 698 Query: 1745 LEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADT 1924 + LE R+DGS A+R+A RF K V LLS + +G+ +TAD Sbjct: 699 VAK--ELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTADL 756 Query: 1925 VIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL-MLDQL-- 2095 V+ + +NP IQA +R HRIGQ+N + ++ LV + + ++ + L ++K+ +L + Sbjct: 757 VVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEAGL 816 Query: 2096 -------------FVNKSESQKEVEDIIRWGTEE 2158 +V+K QK + D+ + E+ Sbjct: 817 SETNFSEMTEATDYVHKDPKQKTIYDLFQQSFED 850
>Q5NC05:TTF2_MOUSE Transcription termination factor 2 - Mus musculus (Mouse)| Length = 1138 Score = 120 bits (302), Expect = 2e-26 Identities = 140/612 (22%), Positives = 245/612 (40%), Gaps = 128/612 (20%) Frame = +2 Query: 662 TVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNV---ILADEMGLGKTVSACA----- 817 T + + P LK +L HQ +AL WL W +S+ ILAD+MGLGKT++ A Sbjct: 533 TAVAEDPAGLKVPLLL-HQKQALAWL--LWRESQKPQGGILADDMGLGKTLTMIALILTK 589 Query: 818 ----------------FLSSLCCEFKINLPCLVLVPLSTMPNWMAEFAS--WAPHLNVVE 943 +LS + L++ P S + +W E + L + Sbjct: 590 KNQQKSKEKERSEPVTWLSKNDSSVFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYL 649 Query: 944 YHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVD-------------- 1081 YHG R+R A K +++++TTY ++ + Sbjct: 650 YHGPNRSRHA-----------------KVLSTYDIVITTYSLLAKEIPTTKQEGEVPGAN 692 Query: 1082 ------ATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEM 1243 + L V W +I+DE H Q R +TGTP+QNN+ +M Sbjct: 693 LSVEGTSAPLLQVVWARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDM 752 Query: 1244 YNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDA------MKNI 1405 Y+L+ FL+ + F + ++ + + + + E L L +LRR K + + Sbjct: 753 YSLMKFLRCSPFDEFSLWKSQVDN-GSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVAL 811 Query: 1406 PPKTERMVPVELTSIQAEYYRAMLTKNYQVL-----RNTGKGGAHQS------------- 1531 P + ++ ++L+ + Y L ++ L R G+G H Sbjct: 812 PARRCQLHRLKLSEDERAVYDIFLARSRSALQSYLKRQEGRGSHHGRSPDNPFSRVAQEF 871 Query: 1532 --------------------LLNIVMQLRKVCNHPYLIPG----TEPESGSPEFLHEMRI 1639 +L+ +++LR+ C H L+ TE ES E ++ Sbjct: 872 GSSVSQGCPAADSQRPSTVHVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQL 931 Query: 1640 KA--------------------------------SAKLALLHSMLKVLHSD--GHRVLIF 1717 A S K++ L + L+ + + +I Sbjct: 932 SALTLSKVDVSEPSPTVSLNGTCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIV 991 Query: 1718 SQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGL 1897 SQ T +L ++ L L+ + +DGSV+ +R + FN + V L+S + G+ Sbjct: 992 SQWTSMLQVVA--LHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGV 1049 Query: 1898 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 G+NL + + + D +NP + QA +R +R+GQ ++++R V +VEE+ILQL +KK Sbjct: 1050 GLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQEKK 1109 Query: 2078 LMLDQLFVNKSE 2113 L + ++ SE Sbjct: 1110 KDLAKQVLSGSE 1121
>P54509:YQHH_BACSU Uncharacterized ATP-dependent helicase yqhH - Bacillus subtilis| Length = 557 Score = 119 bits (297), Expect = 8e-26 Identities = 124/503 (24%), Positives = 216/503 (42%), Gaps = 13/503 (2%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKI 850 ++ P L PHQLE + + + ILADE+GLGKTV A L + Sbjct: 49 LRAPLYLPSFTPLPHQLEVAQKVVEKM--NGKAILADEVGLGKTVEAGLILKEYMIR-GL 105 Query: 851 NLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGD--ATQIGKS 1024 L+LVP S + W+ E ++ A + Y W + D + I + Sbjct: 106 AKKILILVPASLVSQWVKE----------LQEKFLIPAVEQKKSYVWEQCDIVVSSIDTA 155 Query: 1025 KKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVL 1204 K+S ++L S+P++++I+DE H+ ++ +L Sbjct: 156 KRSPHREIVL--------------SIPYDLVIIDEAHKLKNSKTKNYEFVRNLVKKYCLL 201 Query: 1205 LTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-NELATAEKVEELKKLVAPHMLRRL 1381 LT TP+QN I E++NL++ L+P S F+E+F + ++ E E LK LV M+R Sbjct: 202 LTATPIQNRIEEIFNLVSLLKPGHLGSQNHFQEEFAKKKSSLEAHEHLKDLVNKVMIRNR 261 Query: 1382 KKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRK 1561 + D N + VP++ + + Y ++ R S+ +I+ R+ Sbjct: 262 RHDTGLNWKQRHVETVPIQFSPSEQALYD-------EISRLKDSINKPASMFSIMTLQRE 314 Query: 1562 VCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLD 1741 C+ + T + + I L+ + +V + + L + K +D Sbjct: 315 CCSSREAVYMTLKKMLDQKEKQAPAIDEDTISVLIDRINQVTQNS--KALQVVDLIKKID 372 Query: 1742 ----ILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVF------LLSTRSC 1891 I +Y + + F + +G SV R R +D + +F L++T + Sbjct: 373 DKVIIFTEYRATQIYLQWFLQQNGISSVPFR-GGFKRGKKDWMKDLFRGKIQVLIATEAG 431 Query: 1892 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAK 2071 G GINL + +I YD +NP Q + R HR+GQ + +Y + + +VEE IL+L Sbjct: 432 GEGINLQFCNHMINYDLPWNPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILKLLY 491 Query: 2072 KKLMLDQLFVNKSESQKEVEDII 2140 +K+ L + V E++DI+ Sbjct: 492 EKIHLFEKVVG------ELDDIL 508
>Q9NZC9:SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A-like protein 1 - Homo sapiens (Human) Length = 954 Score = 112 bits (279), Expect = 1e-23 Identities = 128/558 (22%), Positives = 230/558 (41%), Gaps = 24/558 (4%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L P Q +N+ K ++LAD+MGLGKT+ A + ++ P LV+VP S Sbjct: 436 LMPFQRAGVNFAIA---KGGRLLLADDMGLGKTIQAIC----IAAFYRKEWPLLVVVPSS 488 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W F W P L+ D + + K L+ Sbjct: 489 VRFTWEQAFLRWLPSLSP---------------------DCINVVVTGKDRLTAGLINIV 527 Query: 1064 EMVLVDATYLR-SVPWEVLIVDEGH--RXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNI 1234 L+ + P++V+I+DE H + + +LL+GTP + Sbjct: 528 SFDLLSKLEKQLKTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRP 587 Query: 1235 GEMYNLLNFLQPASFPSLASFEEKFNEL---------ATAEKVEELKKLVAPH-MLRRLK 1384 E+Y + ++P FP +F ++ + + + + ELK L+ MLRRLK Sbjct: 588 AELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLK 647 Query: 1385 KDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKV 1564 D + +P K ++V + I A RA L + + K Q I+ R Sbjct: 648 SDVLSQLPAKQRKIVVIAPGRINART-RAALDAAAKEMTTKDKTKQQQKDALILFFNRT- 705 Query: 1565 CNHPYLIPGTEPESGSPEFLHEMRIKASAKL-ALLHSMLKVLHSDGHRVLIFSQMTKLLD 1741 A AK+ +++ +L +L S + L+F+ +LD Sbjct: 706 --------------------------AEAKIPSVIEYILDLLESGREKFLVFAHHKVVLD 739 Query: 1742 ILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATAD 1921 + LE R+DGS S AER+ +F + V +LS + +G+ ++AD Sbjct: 740 AITQ--ELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSAD 797 Query: 1922 TVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL------- 2080 V+ + +NP IQA +R HRIGQ++ + ++ LV + + ++ + L ++K+ Sbjct: 798 LVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAG 857 Query: 2081 MLDQLFVNKSESQKEV-EDIIRWGTEELFRNNDEVNGKDND--EASDAKHDVSDIEVKHR 2251 + + F +ES + +D + +LF+ + E G D + EA+++ D Sbjct: 858 LSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES-FDPGSASGTSG 916 Query: 2252 RKTGGLGDVYEDKCIGSS 2305 + +GD ++ + +S Sbjct: 917 SSSQNMGDTLDESSLTAS 934
>Q8MNV7:SMAL1_CAEEL Putative SMARCAL1-like protein - Caenorhabditis elegans| Length = 690 Score = 103 bits (256), Expect = 4e-21 Identities = 115/543 (21%), Positives = 211/543 (38%), Gaps = 30/543 (5%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 LFP+Q E + + + + ++LADEMGLGK+V A ++ +K + P L++ P S Sbjct: 200 LFPYQKEGVIFALE---RDGRILLADEMGLGKSVQAL----TIARYYKADWPLLIVCPAS 252 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W + ++ P ++ + D + V + +Y Sbjct: 253 VKGAWKKQLNTFFPIIHRIFIV-----------------DKSSDPLPDVCTSNTVAIMSY 295 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGH--RXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 E +++ L+ + +I DE H + H +LL+GTP + Sbjct: 296 EQMVLKHDILKKEKYRTIIFDESHMLKDGKARRTKVATDLSKVALHVILLSGTPALSRPS 355 Query: 1238 EMYNLLNFLQPASFPSLASFEEKFN---------ELATAEKVEELKKLVAPH-MLRRLKK 1387 E++ + + F + F ++ E EEL ++ M+RRLK Sbjct: 356 ELFTQIRLIDHKLFTNFHEFAIRYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKA 415 Query: 1388 DAMKNIPPKTERMVPVELTSIQAEYYRAMLTK-NYQVLRNTGKGGAHQSLLNI-----VM 1549 D +K++P K +V V +I A + +Y+ + + + H+SLL ++ Sbjct: 416 DVLKDLPEKRREVVYVSGPTIDARMDDLQKARADYEKVNSMER--KHESLLEFYSLTGIV 473 Query: 1550 QLRKVCNH---PYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFS 1720 + VC H Y P P +VLIF+ Sbjct: 474 KAAAVCEHILENYFYPDAPPR---------------------------------KVLIFA 500 Query: 1721 QMTKLLDILEDYLTLEFGPKAFE--RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCG 1894 +LD ++ +E + R+DG R A F D V +LS + G Sbjct: 501 HHQIVLDTIQ----VEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITAAG 556 Query: 1895 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKK 2074 +GI L A V+ + FNP +QA +RAHR+GQ + + V L+ + + ++ + + ++ Sbjct: 557 VGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQ 616 Query: 2075 KL-------MLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSD 2233 KL + F + D + G E + + + ++ + K D D Sbjct: 617 KLDVLGQVSLSSDTFRTADKMHLRFNDAAQPGIAEYLKKTPDTTIDEWEDPVEEKED-DD 675 Query: 2234 IEV 2242 +E+ Sbjct: 676 LEI 678
>Q9TTA5:SMAL1_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A-like protein 1 - Bos taurus (Bovine) Length = 941 Score = 99.4 bits (246), Expect = 6e-20 Identities = 113/468 (24%), Positives = 194/468 (41%), Gaps = 30/468 (6%) Frame = +2 Query: 767 VILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEY 946 ++LAD+MGLGKT+ A + ++ P LV+VP S W F W P LN ++ Sbjct: 452 LLLADDMGLGKTIQAIC----IAAYYRKEWPLLVVVPSSVRFTWEQAFCRWLPSLNPLDI 507 Query: 947 HGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVD 1126 + GK + + V + +++++ L+ P++V+I+D Sbjct: 508 ------------------NVVVTGKDRLTDGL-VNIVSFDLLSKLEKQLKP-PFKVVIID 547 Query: 1127 EGHRXXXXXXXXXXXXXXXXXQHRV-LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE 1303 E H RV LL+GTP + E+Y + ++P FP +F Sbjct: 548 ESHFLKNIKTAVCAAMPLLKVAKRVILLSGTPAMSRPAELYTQILAVRPTFFPQFHAFGL 607 Query: 1304 KFN---------ELATAEKVEELKKLVAPH-MLRRLKKDAMKNIPPKTERMVPVELTSIQ 1453 ++ + + + + ELK L+ MLRRLK D + +P K R S Q Sbjct: 608 RYCGAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKGDVLSQLPAKQPRW----WWSPQ 663 Query: 1454 AEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSP--EFLH 1627 A R+M PG EP P E Sbjct: 664 A---RSM-------------------------------------PGPEPPWMPPAKEMTT 683 Query: 1628 EMRIKASAKLAL---------------LHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLT 1762 + + K K AL + +L +L S + L+F+ +LD +T Sbjct: 684 KDKTKQQQKEALILFFNRTAEAKIPSIIEYILDLLESGREKFLVFAHHKVVLDA----IT 739 Query: 1763 LEFGPKAFE--RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 E K + R+DGS S A+R+ + + F+ + +LS + +G+ ++AD V+ Sbjct: 740 KELERKRVQHIRIDGSTSSADRETSASSFSCPRA-LRGVLSITAANMGLTFSSADLVVFG 798 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL 2080 + +NP +QA +R HRIGQ + + ++ LV R + ++ + L ++K+ Sbjct: 799 ELFWNPGVLMQAEDRVHRIGQLSSVSIHYLVARGTADDYLWPLIQEKI 846
>Q9FNI6:SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3-like 2 - Arabidopsis thaliana (Mouse-ear cress) Length = 1029 Score = 96.3 bits (238), Expect = 5e-19 Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 S+K+ L L+ L S G + ++FSQ T LD+L+ + L +F R+DG++S +R+ Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQ--IPLSRNNFSFVRLDGTLSQQQRE 919 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 + F++D + V L+S ++ G+GINL A + D +NP + QA+ R HRIGQ+ Sbjct: 920 KVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTK 979 Query: 2006 RLLVYRLVVRASVEERILQL-AKKKLMLDQLFVNKSESQKEVEDI 2137 + + R +V+ +VEER+ + A+K+ M+ ++ +E++ Sbjct: 980 EVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSARIEEL 1024 Score = 75.9 bits (185), Expect = 8e-13 Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 23/264 (8%) Frame = +2 Query: 863 LVLVPLSTMPNWMAEFASWAP--HLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSH 1036 L++ P++ + W E A L+V ++G +R + A K Sbjct: 493 LIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDA-----------------KLLS 535 Query: 1037 KFNVLLTTYEMVL--------VDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQ 1192 + +V++TTY ++ D + +V W +++DE H Sbjct: 536 QSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVAD 595 Query: 1193 HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLA---SFEEKFNELATAEKVEELKKLVAP 1363 R LTGTP+QNN+ ++Y+LL FL+ + + A +K E ++ ++ ++ P Sbjct: 596 RRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKP 655 Query: 1364 HMLRRLKKDAMKN------IPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGA- 1522 MLRR K + +PP R++ EL+ + ++Y A+ ++ + G Sbjct: 656 IMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKV 715 Query: 1523 ---HQSLLNIVMQLRKVCNHPYLI 1585 + S+L ++++LR+ C+HP+L+ Sbjct: 716 LHNYASILELLLRLRQCCDHPFLV 739
>Q753V5:RAD5_ASHGO DNA repair protein RAD5 - Ashbya gossypii (Yeast) (Eremothecium| gossypii) Length = 1085 Score = 96.3 bits (238), Expect = 5e-19 Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 6/182 (3%) Frame = +2 Query: 1595 EPESGSPEFLHEMRIKASAKLALLHSMLKVLH--SDGHRVLIFSQMTKLLDILEDYLTLE 1768 E +G E + K S+K+ L LK L S +V++FSQ + LDILE+ L Sbjct: 892 EDINGKLEPVPYSNTKKSSKIVALIRHLKHLQDTSANEQVVVFSQFSSYLDILENELRQS 951 Query: 1769 FGPKAFE--RVDGSVSVAERQAAITRFNQDKT--RFVFLLSTRSCGLGINLATADTVIIY 1936 F E + DG + + ER + +F + V LLS ++ G+G+NL A I Sbjct: 952 FASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGVGLNLTCASHAFIM 1011 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSES 2116 D ++P + QAM+R HRIGQSN + +YR +V S+EE++L++ +KK L + FV+ E Sbjct: 1012 DPWWSPGMEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKMLRIQEKKRSLGE-FVDADEE 1070 Query: 2117 QK 2122 ++ Sbjct: 1071 ER 1072 Score = 73.2 bits (178), Expect = 5e-12 Identities = 73/337 (21%), Positives = 148/337 (43%), Gaps = 55/337 (16%) Frame = +2 Query: 761 KNVILADEMGLGKTVSACAFLSSLCCEFKINLPC-------------------------- 862 K ILADEMGLGKT+S A ++ + + K L Sbjct: 454 KGGILADEMGLGKTISILALITMVPSDTKHLLTTAQEKPPVGHLSLELGISTVKPYTAST 513 Query: 863 -LVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKS--KKS 1033 L++VP+S +P W EF + V + +G + ++ G+ + + K+ Sbjct: 514 TLIVVPMSLLPQWRNEF------VRVNDGNG-------LYCEVYYAGNVSNLRTLLVKQK 560 Query: 1034 HKFNVLLTTYEMVLVDATYLRSVPWEV------------LIVDEGHRXXXXXXXXXXXXX 1177 +V+LTTY +V + + L+ +E +I+DEGH Sbjct: 561 SPPSVVLTTYGVVQTEWSKLQQFDYEASNEGLFSVEFFRIILDEGHNIRNRTTKTSKAVM 620 Query: 1178 XXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF----EEKFNELATAEKVEEL 1345 + + +LTGTP+ N + ++++L+ F+ + + + + F + + +E + Sbjct: 621 ALTSRRKWVLTGTPIMNRLDDLFSLIKFMNFEPWCKIDYWRQFVSDPFEKKDYSSALEVI 680 Query: 1346 KKLVAPHMLRRLKK------DAMKNIPPKTERMVPVELTSIQAEYYRAMLTK-NYQVLRN 1504 + ++ P +LRR K + + +PPK + + + +A Y+ L+K + V + Sbjct: 681 QAVMGPILLRRTKNMKDEDGNPLVQLPPKEVVIEMIRFSDTEAGLYKYFLSKAEHSVKES 740 Query: 1505 TGKGG---AHQSLLNIVMQLRKVCNHPYLIPGTEPES 1606 +G + ++L +++LR+VC H + + G++ E+ Sbjct: 741 LARGDLLKKYSTILLHILRLRQVCCH-FKLLGSQDEN 776
>Q61687:ATRX_MOUSE Transcriptional regulator ATRX - Mus musculus (Mouse)| Length = 2476 Score = 96.3 bits (238), Expect = 5e-19 Identities = 93/339 (27%), Positives = 144/339 (42%), Gaps = 45/339 (13%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKS---------KNVILADEMGLGKTVSACAFLSS-LCCEFKIN 853 L PHQ++ + ++ C +S ILA MGLGKT+ +FL + L C+ Sbjct: 1545 LKPHQVDGVQFMWDCCCESVEKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF 1604 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYE-------WHEGDATQ 1012 LV+ PL+T NWM EF W LN E + + R E W E Sbjct: 1605 STALVVCPLNTALNWMNEFEKWQEGLNDNEKLEVSELATVKRPQERSYMLQRWQEDGGVM 1664 Query: 1013 I-----------GKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXX 1159 I G++ KS K L + LVD + ++ DEGH Sbjct: 1665 IIGYEMYRNLAQGRNVKSRK---LKDIFNKALVDPGP------DFVVCDEGHILKNEASA 1715 Query: 1160 XXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-NEL------ 1318 + R++LTGTPLQNN+ E + ++NF++ S+ F +F N + Sbjct: 1716 VSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCA 1775 Query: 1319 -ATAEKVEELKK-------LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM 1474 +T V +KK ++A + R+ K +PPK E ++ V +T+IQ + Y+ Sbjct: 1776 DSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYY 1835 Query: 1475 LTKNYQVLRNT--GKGGAHQSLLNIVMQLRKVCNHPYLI 1585 L V +T G+G A L L ++ HP+ + Sbjct: 1836 LDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCL 1874 Score = 94.7 bits (234), Expect = 2e-18 Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 28/213 (13%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKA----------- 1783 ++ S K+ LL +L++ G +VL+FSQ LD++ED+L L K Sbjct: 1997 LEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKEKPLIYKG 2056 Query: 1784 ---------FERVDGSVSVAERQAAITRFNQDKTRF---VFLLSTRSCGLGINLATADTV 1927 + R+DGS + R+ FN D+T +F++ST++ LGINL A+ V Sbjct: 2057 EGKWIRNIDYYRLDGSTNAQSRKKWAEEFN-DETNVRGRLFIISTKAGSLGINLVAANRV 2115 Query: 1928 IIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL--QLAKKKL---MLDQ 2092 II+D+ +NP DIQ++ R +R GQ+ + VYR + + ++E++I Q+ K+ L ++DQ Sbjct: 2116 IIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQ 2175 Query: 2093 LFVNKSESQKEVEDIIRWGTEELFRNNDEVNGK 2191 V + + E+ ++ + + L N E K Sbjct: 2176 QQVERHFTMNELTELYTFEPDLLDDPNSEKKKK 2208
>Q7YQM3:ATRX_PONPY Transcriptional regulator ATRX - Pongo pygmaeus (Orangutan)| Length = 2492 Score = 95.5 bits (236), Expect = 9e-19 Identities = 92/339 (27%), Positives = 143/339 (42%), Gaps = 45/339 (13%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKS---------KNVILADEMGLGKTVSACAFLSS-LCCEFKIN 853 L PHQ++ + ++ C +S ILA MGLGKT+ +FL + L C+ Sbjct: 1560 LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF 1619 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYE-------WHEGDATQ 1012 LV+ PL+T NWM EF W L E + + R E W E Sbjct: 1620 STALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVM 1679 Query: 1013 I-----------GKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXX 1159 I G++ KS K + + LVD + ++ DEGH Sbjct: 1680 IIGYEMYRNLAQGRNVKSRKLKEI---FNKALVDPGP------DFVVCDEGHILKNEASA 1730 Query: 1160 XXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-NEL------ 1318 + R++LTGTPLQNN+ E + ++NF++ S+ F +F N + Sbjct: 1731 VSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCA 1790 Query: 1319 -ATAEKVEELKK-------LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM 1474 +T V +KK ++A + R+ K +PPK E ++ V +TSIQ + Y+ Sbjct: 1791 DSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYY 1850 Query: 1475 LTKNYQVLRNT--GKGGAHQSLLNIVMQLRKVCNHPYLI 1585 L V N+ G+G A L L ++ HP+ + Sbjct: 1851 LDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCL 1889 Score = 95.1 bits (235), Expect = 1e-18 Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 35/235 (14%) Frame = +2 Query: 1592 TEPESGSPEFLHEMRIKASA-------KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILE 1750 + P S +P++ + A A K+ LL +L++ G +VL+FSQ LD++E Sbjct: 1992 SNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIE 2051 Query: 1751 DYLTLEFGPKA--------------------FERVDGSVSVAERQAAITRFNQDKTRF-- 1864 D+L L K + R+DGS + R+ FN D+T Sbjct: 2052 DFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFN-DETNVRG 2110 Query: 1865 -VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 2041 +F++ST++ LGINL A+ VII+D+ +NP DIQ++ R +R GQ+ + VYR + + + Sbjct: 2111 RLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGT 2170 Query: 2042 VEERIL--QLAKKKL---MLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGK 2191 +E++I Q+ K+ L ++DQ V + + E+ ++ + + L N E K Sbjct: 2171 MEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKK 2225
>Q7YQM4:ATRX_PANTR Transcriptional regulator ATRX - Pan troglodytes (Chimpanzee)| Length = 2492 Score = 95.5 bits (236), Expect = 9e-19 Identities = 92/339 (27%), Positives = 143/339 (42%), Gaps = 45/339 (13%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKS---------KNVILADEMGLGKTVSACAFLSS-LCCEFKIN 853 L PHQ++ + ++ C +S ILA MGLGKT+ +FL + L C+ Sbjct: 1560 LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF 1619 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYE-------WHEGDATQ 1012 LV+ PL+T NWM EF W L E + + R E W E Sbjct: 1620 STALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVM 1679 Query: 1013 I-----------GKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXX 1159 I G++ KS K + + LVD + ++ DEGH Sbjct: 1680 IIGYEMYRNLAQGRNVKSRKLKEI---FNKALVDPGP------DFVVCDEGHILKNEASA 1730 Query: 1160 XXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-NEL------ 1318 + R++LTGTPLQNN+ E + ++NF++ S+ F +F N + Sbjct: 1731 VSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCA 1790 Query: 1319 -ATAEKVEELKK-------LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM 1474 +T V +KK ++A + R+ K +PPK E ++ V +TSIQ + Y+ Sbjct: 1791 DSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYY 1850 Query: 1475 LTKNYQVLRNT--GKGGAHQSLLNIVMQLRKVCNHPYLI 1585 L V N+ G+G A L L ++ HP+ + Sbjct: 1851 LDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCL 1889 Score = 95.1 bits (235), Expect = 1e-18 Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 35/235 (14%) Frame = +2 Query: 1592 TEPESGSPEFLHEMRIKASA-------KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILE 1750 + P S +P++ + A A K+ LL +L++ G +VL+FSQ LD++E Sbjct: 1992 SNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIE 2051 Query: 1751 DYLTLEFGPKA--------------------FERVDGSVSVAERQAAITRFNQDKTRF-- 1864 D+L L K + R+DGS + R+ FN D+T Sbjct: 2052 DFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFN-DETNVRG 2110 Query: 1865 -VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 2041 +F++ST++ LGINL A+ VII+D+ +NP DIQ++ R +R GQ+ + VYR + + + Sbjct: 2111 RLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGT 2170 Query: 2042 VEERIL--QLAKKKL---MLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGK 2191 +E++I Q+ K+ L ++DQ V + + E+ ++ + + L N E K Sbjct: 2171 MEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKK 2225
>P46100:ATRX_HUMAN Transcriptional regulator ATRX - Homo sapiens (Human)| Length = 2492 Score = 95.5 bits (236), Expect = 9e-19 Identities = 92/339 (27%), Positives = 143/339 (42%), Gaps = 45/339 (13%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKS---------KNVILADEMGLGKTVSACAFLSS-LCCEFKIN 853 L PHQ++ + ++ C +S ILA MGLGKT+ +FL + L C+ Sbjct: 1560 LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF 1619 Query: 854 LPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYE-------WHEGDATQ 1012 LV+ PL+T NWM EF W L E + + R E W E Sbjct: 1620 STALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVM 1679 Query: 1013 I-----------GKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXX 1159 I G++ KS K + + LVD + ++ DEGH Sbjct: 1680 IIGYEMYRNLAQGRNVKSRKLKEI---FNKALVDPGP------DFVVCDEGHILKNEASA 1730 Query: 1160 XXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-NEL------ 1318 + R++LTGTPLQNN+ E + ++NF++ S+ F +F N + Sbjct: 1731 VSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCA 1790 Query: 1319 -ATAEKVEELKK-------LVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM 1474 +T V +KK ++A + R+ K +PPK E ++ V +TSIQ + Y+ Sbjct: 1791 DSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYY 1850 Query: 1475 LTKNYQVLRNT--GKGGAHQSLLNIVMQLRKVCNHPYLI 1585 L V N+ G+G A L L ++ HP+ + Sbjct: 1851 LDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCL 1889 Score = 95.1 bits (235), Expect = 1e-18 Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 35/235 (14%) Frame = +2 Query: 1592 TEPESGSPEFLHEMRIKASA-------KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILE 1750 + P S +P++ + A A K+ LL +L++ G +VL+FSQ LD++E Sbjct: 1992 SNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIE 2051 Query: 1751 DYLTLEFGPKA--------------------FERVDGSVSVAERQAAITRFNQDKTRF-- 1864 D+L L K + R+DGS + R+ FN D+T Sbjct: 2052 DFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFN-DETNVRG 2110 Query: 1865 -VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 2041 +F++ST++ LGINL A+ VII+D+ +NP DIQ++ R +R GQ+ + VYR + + + Sbjct: 2111 RLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGT 2170 Query: 2042 VEERIL--QLAKKKL---MLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGK 2191 +E++I Q+ K+ L ++DQ V + + E+ ++ + + L N E K Sbjct: 2171 MEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKK 2225
>Q9GQN5:ATRX_DROME Transcriptional regulator ATRX homolog - Drosophila melanogaster| (Fruit fly) Length = 1311 Score = 94.7 bits (234), Expect = 2e-18 Identities = 61/191 (31%), Positives = 109/191 (57%), Gaps = 27/191 (14%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL--------EF---------- 1771 S KL +L +L+ + G ++L+FSQ + LD++E +L+L EF Sbjct: 897 SPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGC 956 Query: 1772 --GPKAFERVDGSVSVAERQAAITRFNQ--DKTRFVFLLSTRSCGLGINLATADTVIIYD 1939 K + R+DGS SV +R+A +FN + +FL+STR+ GLGINL A+ V+I+D Sbjct: 957 WTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFD 1016 Query: 1940 SDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERIL--QLAKK---KLMLDQLFVN 2104 +NP D Q++ R +R GQ +YRL+ ++E+++ Q+AK+ K ++D+ ++ Sbjct: 1017 VSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQIS 1076 Query: 2105 KSESQKEVEDI 2137 + +Q ++ ++ Sbjct: 1077 RHYNQTDLMEL 1087 Score = 75.5 bits (184), Expect = 1e-12 Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 39/330 (11%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKS---------KNVILADEMGLGKTVSACAFLSSLCCEFKINL 856 L PHQ+ + ++ F++ ILA MGLGKT+ +L + Sbjct: 455 LKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTG 514 Query: 857 PCLVLV--PLSTMPNWMAEFASWAP--HLNVVEYHGSARARSA----IRQYEW-HEGDAT 1009 VL+ PLST+ NW EF SW + N +E + +R + + EW +EG Sbjct: 515 VDRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVC 574 Query: 1010 QIG----KSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXX 1177 +G + + K L L+ A L ++++ DEGH Sbjct: 575 ILGYDMYRILANEKAKGLRKKQREQLMQA--LVDPGPDLVVCDEGHLLKNEKTSISKAVT 632 Query: 1178 XXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF-NELATAEKVEELKKL 1354 + R++LTGTPLQNN+ E Y ++ F++P + + +F N + + + ++ Sbjct: 633 RMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERD 692 Query: 1355 V-----APHMLRRLKKDAMKN---------IPPKTERMVPVELTSIQAEYYRAMLTKNYQ 1492 + H+L +L + ++ +PPK E +V L+ +Q + Y +T + + Sbjct: 693 LRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHRE 752 Query: 1493 VLRN--TGKGGAHQSLLNIVMQLRKVCNHP 1576 GKG L LR++ HP Sbjct: 753 QSGGDVVGKGA---RLFQDFQDLRRIWTHP 779
>Q9FF61:SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3-like 1 - Arabidopsis thaliana (Mouse-ear cress) Length = 881 Score = 91.3 bits (225), Expect = 2e-17 Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Frame = +2 Query: 1577 YLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRV--LIFSQMTKLLDILE 1750 Y P P+S + + S+K++ L S+L + ++FSQ K+L +LE Sbjct: 683 YNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLE 742 Query: 1751 DYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR--FVFLLSTRSCGLGINLATADT 1924 L+ R+DG+++V +R I F + V L S ++ G GINL A Sbjct: 743 T--PLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASR 800 Query: 1925 VIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQL-AKKKLMLDQLF- 2098 V ++D +NP + QAM+R HRIGQ + + R++ R S+EER+L+L KKK + ++ F Sbjct: 801 VYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFK 860 Query: 2099 --VNKSESQKEVEDII 2140 K E + VED++ Sbjct: 861 RRQKKDEREVNVEDVV 876 Score = 76.6 bits (187), Expect = 4e-13 Identities = 57/217 (26%), Positives = 110/217 (50%), Gaps = 12/217 (5%) Frame = +2 Query: 974 IRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVLVDATY----LRSVPWEVLIVDEGHRX 1141 ++ Y +H G+ T + K++++LTTY + V+ ++ ++ + W +I+DE H Sbjct: 385 LKVYMYHGGERTD--DVNELMKYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTI 442 Query: 1142 XXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNE-- 1315 R +TGTP+QN ++Y+L+ FL+ F S+ S+ + + Sbjct: 443 KNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPF-SIKSYWQSLIQRP 501 Query: 1316 LATAEK--VEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNY 1489 L K + L+ L+A LRR K+ ++ +PPKT VEL+ + + Y M + Sbjct: 502 LGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAK 561 Query: 1490 QVLRNTGKGGA----HQSLLNIVMQLRKVCNHPYLIP 1588 V++N G+ + ++L+I+++LR++C+ L P Sbjct: 562 GVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCP 598
>Q9FIY7:SM3L3_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily A member 3-like 3 - Arabidopsis thaliana (Mouse-ear cress) Length = 1277 Score = 90.9 bits (224), Expect = 2e-17 Identities = 56/169 (33%), Positives = 97/169 (57%), Gaps = 3/169 (1%) Frame = +2 Query: 1640 KASAKLA-LLHSMLKVLHS-DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSV 1813 K S+K++ LL + K+ S G + ++FSQ T LD+LE + L F R DG ++ Sbjct: 1106 KESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLE--IPLRRRGFEFLRFDGKLAQ 1163 Query: 1814 AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1993 R+ + FN+ K + + L+S ++ G+G+NL A +V + D +NP + QA+ R HRI Sbjct: 1164 KGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRI 1223 Query: 1994 GQSNRLLVYRLVVRASVEERILQL-AKKKLMLDQLFVNKSESQKEVEDI 2137 GQ + V R +V+ +VEER+ Q+ A+K+ M+ ++ +E++ Sbjct: 1224 GQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEEL 1272 Score = 79.7 bits (195), Expect = 5e-14 Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 47/319 (14%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSS-----------------------------LCCEFKINLPC 862 ILAD MGLGKTV A + + K Sbjct: 684 ILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGGT 743 Query: 863 LVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK- 1039 L++ P++ + W E +E H S + Y GD T K+ SH Sbjct: 744 LIICPMALLSQWKDE----------LETHSKPDTVSVLVYYG---GDRTHDAKAIASHDV 790 Query: 1040 ----FNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLL 1207 + VL + Y+ + ++ + R + W +++DE H R L Sbjct: 791 VLTTYGVLTSAYKQDMANSIFHR-IDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCL 849 Query: 1208 TGTPLQNNIGEMYNLLNFLQPASFPSLASFE---EKFNELATAEKVEELKKLVAPHMLRR 1378 TGTPLQN + ++Y+LL FL + + A + +K E ++ +K ++ P MLRR Sbjct: 850 TGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRR 909 Query: 1379 LKKDAMK------NIPPKTERMVPVELTSIQAEYYRAMLTKN-YQVLRNTGKGGA---HQ 1528 K+ K +PP +++ E + + ++Y A+ ++ Q + +G + Sbjct: 910 TKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYA 969 Query: 1529 SLLNIVMQLRKVCNHPYLI 1585 ++L ++++LR+ CNHP+L+ Sbjct: 970 NILELLLRLRQCCNHPFLV 988
>Q10332:YBMA_SCHPO Uncharacterized ATP-dependent helicase C582.10c - Schizosaccharomyces| pombe (Fission yeast) Length = 830 Score = 90.5 bits (223), Expect = 3e-17 Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 48/339 (14%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNV----ILADEMGLGKTVSACAFLSSLCCEFKINL--PCL 865 L HQ++ L WL+ SK+ ILAD+MGLGKT+ A + S K + L Sbjct: 233 LLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSHPLPKKKHSIKSTL 292 Query: 866 VLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFN 1045 V+ PLS + W +E + + L + YHG++R + K H+++ Sbjct: 293 VVAPLSLIKQWESEVQTKSK-LTAIVYHGASRYKLL-----------------KVIHEYD 334 Query: 1046 VLLTTYEMVLVD-----------------ATYLRSVP------WEVLIVDEGHRXXXXXX 1156 V++TTY++++ + +Y + P W +I+DE H Sbjct: 335 VVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNKSS 394 Query: 1157 XXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFN-ELATAEK 1333 +R LTGTPLQNN+ E+Y+L+ FL F + ++++ + L E+ Sbjct: 395 KSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLCQGEE 454 Query: 1334 ---VEELKKLVAPHMLRRLK--------KDAMKNIPPKTERM---VPVELTSIQAEYYRA 1471 + L+ L++ MLRR K KD ++R+ V + + ++Y Sbjct: 455 NLVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSN 514 Query: 1472 M---LTKNYQVLRNTGK-GGAHQSLLNIVMQLRKVCNHP 1576 + + + N+GK G + ++L ++++LR+ CNHP Sbjct: 515 LARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHP 553 Score = 82.4 bits (202), Expect = 8e-15 Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 10/156 (6%) Frame = +2 Query: 1640 KASAKLALLHSMLKVLHSDGH----------RVLIFSQMTKLLDILEDYLTLEFGPKAFE 1789 K K + + +LK+L D + +IFSQ T LDI++ L L F Sbjct: 641 KTLYKSSKIREILKILSLDEQEEDDTVRGLRKTIIFSQFTTFLDIID--LHLRKAGIGFV 698 Query: 1790 RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1969 R DG ++ R+ ++ D V L S + LG+NL A VI+ D +NP + Q Sbjct: 699 RYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQ 758 Query: 1970 AMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 A++R HRIGQ +LVY+LVV ++EE+I++L K Sbjct: 759 AIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQNLK 794
>Q7S1P9:RAD5_NEUCR DNA repair protein rad-5 - Neurospora crassa| Length = 1222 Score = 90.5 bits (223), Expect = 3e-17 Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 10/294 (3%) Frame = +2 Query: 1286 LASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTER-MVPVELTSIQAEY 1462 L + E+F AT + + H+LR+++ +A+ P E M+ +T Sbjct: 924 LQTLIERFT--ATTDDASKTNNNFGAHVLRQIRDEAVNECPICAEEPMIDQAVTGCWHSA 981 Query: 1463 YRAMLTK--NYQVLRN-TGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPE-FLHE 1630 + L +Q RN + + +NI + +V H + + SPE + Sbjct: 982 CKKCLLDYIKHQTDRNEVPRCFQCREHINI-RDIFEVIRHDDDLETSSTPGASPEPRISL 1040 Query: 1631 MRIKA---SAKLALLHSMLKVLHSDGHRV--LIFSQMTKLLDILEDYLTLEFGPKAFERV 1795 R+ A SAK+ L S L+ L + ++ L+ SQ T L ++ LT +F R+ Sbjct: 1041 QRVGANDSSAKIVALISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRH--KISFLRL 1098 Query: 1796 DGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 DGS+S R A +T F V LLS ++ G+G+NL +A V + D ++ + QA+ Sbjct: 1099 DGSMSQKARAAVLTEFQSTNKFCVLLLSLKAGGVGLNLTSAKRVYMMDPWWSFAVEAQAI 1158 Query: 1976 NRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDI 2137 +R HR+GQ + + VYR +V+ SVE R+L++ ++K + S+ +K+++ I Sbjct: 1159 DRVHRMGQEDEVRVYRFIVKQSVEMRMLRVQERKKFIATSLGMMSDEEKKMQRI 1212 Score = 73.6 bits (179), Expect = 4e-12 Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 57/333 (17%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCCEFKI-----------NLP-----------------CL 865 ILADEMGLGKT+ + + S E I NLP L Sbjct: 578 ILADEMGLGKTIQMLSLIHSHRSEVAIKAREAGPTSVNNLPRLPTVSGQKTTIDAPCTTL 637 Query: 866 VLVPLSTMPNWM--AEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 V+ P+S + W AE AS + Y+G+ + + T ++ ++ Sbjct: 638 VVAPMSLLAQWQSEAENASKEGTFKTMMYYGAEKNVDLV----------TMCCEANAANA 687 Query: 1040 FNVLLTTYEMVLVDATYLR-------------SVPWEVLIVDEGHRXXXXXXXXXXXXXX 1180 +V++T+Y +VL + T L S+ + +I+DE H Sbjct: 688 PDVIITSYGVVLSEFTQLATKNGDRLSSRGLFSLNFFRVILDEAHNIKNRQAKTSRACYE 747 Query: 1181 XXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELK 1348 +HR +LTGTP+ N + ++++L+ FL+ + + + + F ++ ++ Sbjct: 748 IAAEHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWRTFITVPFESKNFVRALDVVQ 807 Query: 1349 KLVAPHMLRRLKK------DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 ++ P ++RR K + +PPK +V +EL+ + Y + + + L + Sbjct: 808 TVLEPLVMRRTKDMKTPDGQFLVPLPPKHIEIVDIELSEPERAVYDYVFNRAKRTLFDNM 867 Query: 1511 KGG----AHQSLLNIVMQLRKVCNHPYLIPGTE 1597 + G A S+ +++LR+ C HP L+ E Sbjct: 868 QAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQE 900
>P36607:RAD5_SCHPO DNA repair protein rad5 - Schizosaccharomyces pombe (Fission yeast)| Length = 1133 Score = 90.1 bits (222), Expect = 4e-17 Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 2/166 (1%) Frame = +2 Query: 1646 SAKL-ALLHSMLKVLHS-DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAE 1819 S KL LL + ++ HS + +V+IFSQ T LDI+ D L E + R DG++S Sbjct: 962 SVKLNGLLGQLRQLTHSSEPEKVVIFSQFTTFLDIIADVLESE--KMGYARFDGTMSQQM 1019 Query: 1820 RQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 R A+ F D V ++S ++ G+G+NL A+ V I D ++ + QA++R HR+GQ Sbjct: 1020 RSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQ 1079 Query: 2000 SNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDI 2137 + V R +VR +VEER+L++ ++K + + SE +++V+ I Sbjct: 1080 EKPVFVTRYIVRDTVEERMLKIQERKNFITGT-LGMSEGKQQVQSI 1124 Score = 72.0 bits (175), Expect = 1e-11 Identities = 68/310 (21%), Positives = 137/310 (44%), Gaps = 38/310 (12%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCC-----------EFKINLP-----CLVLVPLSTMPNWM 901 ILADEMGLGKT+ + + S C K +LP LV+ P+S + W Sbjct: 526 ILADEMGLGKTIEVLSLIHSRPCFSTDEIPEAFRHSKPSLPVASRTTLVVAPMSLLDQWH 585 Query: 902 AEF--ASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVL 1075 +E S + Y+GS + + I S +++T+Y ++L Sbjct: 586 SEACKVSQGTKFRSMIYYGSEKPLDL---------KSCVIDTSTAP---LIIITSYGVLL 633 Query: 1076 VD------ATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIG 1237 + ++ L SV W +++DEGH Q+R ++TGTP+ N + Sbjct: 634 SEFSQQSHSSGLFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLD 693 Query: 1238 EMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELKKLVAPHMLRRLKKDAMKN- 1402 ++Y+L+ F++ + + ++ + + + ++ ++ +LRR K+ +N Sbjct: 694 DLYSLIKFMRYEPWCNYTYWQTFVSLPYQSKDVLKALNVVQSILEFLVLRRTKETKDRNG 753 Query: 1403 -----IPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGA----HQSLLNIVMQL 1555 +PPKT ++ ++ + + + Y ++ TK + G + ++L ++++L Sbjct: 754 NSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRL 813 Query: 1556 RKVCNHPYLI 1585 R+ C P L+ Sbjct: 814 RQACCDPVLL 823
>Q4IJ84:RAD5_GIBZE DNA repair protein RAD5 - Gibberella zeae (Fusarium graminearum)| Length = 1154 Score = 89.4 bits (220), Expect = 7e-17 Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 5/170 (2%) Frame = +2 Query: 1643 ASAKLALLHSMLKVLHSDGHRV--LIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 +SAK+ L S L+ L + ++ ++FSQ T L ++E LT F R+DGS++ Sbjct: 982 SSAKVVALMSELRALRREHPKMKSVVFSQFTSFLSLIEPALTR--ANIKFLRLDGSMAQK 1039 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 R A + F + K + LLS R+ G+G+NL +A V + D ++ + QA++R HR+G Sbjct: 1040 ARAAVLNEFTEKKGFTILLLSLRAGGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMG 1099 Query: 1997 QSNRLLVYRLVVRASVEERILQL-AKKKLMLDQLFVNKSESQK--EVEDI 2137 Q + V R VV+ SVEER+L++ +KK + L + E +K +EDI Sbjct: 1100 QEAEVQVKRFVVKESVEERMLKVQERKKFIATSLGMMNDEEKKLQRIEDI 1149 Score = 65.5 bits (158), Expect = 1e-09 Identities = 71/329 (21%), Positives = 136/329 (41%), Gaps = 57/329 (17%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFL----SSLCCEFK----------------------INLPC--L 865 ILADEMGLGKT+ + + S + E + ++ PC L Sbjct: 516 ILADEMGLGKTIQMLSLVHTHRSEVALEARQSVVARSNVNQLTRLGKNSESILDAPCTTL 575 Query: 866 VLVPLSTMPNWM--AEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHK 1039 V+ P+S + W AE AS + Y+G+ ++ + S ++ Sbjct: 576 VVAPMSLLSQWQSEAEKASKDGTMKTELYYGNEKSSNL----------QALCCASNAANA 625 Query: 1040 FNVLLTTYEMVLVDATYLR-------------SVPWEVLIVDEGHRXXXXXXXXXXXXXX 1180 ++++T+Y +VL + + L S+ + +I+DE H Sbjct: 626 PDLVITSYGVVLSEFSSLAARNGDKSFHNGLFSLRFFRIIIDEAHHIKNRSSKTSKACYE 685 Query: 1181 XXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELK 1348 HR LTGTP+ N + ++++L+ FL + + + + F ++ ++ Sbjct: 686 ISATHRWALTGTPIVNKLEDLFSLVRFLGVEPWNNFSFWRTFITVPFESGDFMRALDVVQ 745 Query: 1349 KLVAPHMLRRLKK------DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 ++ P +LRR K + + +PPK +V VEL+ + + Y + K + Sbjct: 746 TVLEPLVLRRTKDMKTPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTFSQNV 805 Query: 1511 KGG----AHQSLLNIVMQLRKVCNHPYLI 1585 + G A ++ +++LR+ C HP L+ Sbjct: 806 EAGTVMKAFTTIFAQILRLRQSCCHPILV 834
>P32849:RAD5_YEAST DNA repair protein RAD5 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1169 Score = 89.0 bits (219), Expect = 9e-17 Identities = 61/190 (32%), Positives = 107/190 (56%), Gaps = 8/190 (4%) Frame = +2 Query: 1592 TEPESGSPEFLHEMRIKASAKLALLHSMLKVLH--SDGHRVLIFSQMTKLLDILEDYLTL 1765 T S + EF S+K+ L L++L S G +V+IFSQ + LDILE LT Sbjct: 975 TNSNSKNLEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTH 1034 Query: 1766 EFGPKAFE--RVDGSVSVAERQAAITRFN-QDKTRF-VFLLSTRSCGLGINLATADTVII 1933 F + + DG +S+ ER + + F +D +R + LLS ++ G+G+NL A + Sbjct: 1035 TFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYM 1094 Query: 1934 YDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE 2113 D ++P + QA++R HRIGQ+N + V R +++ S+EE++L++ +KK + + + Sbjct: 1095 MDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAMDTDED 1154 Query: 2114 SQKE--VEDI 2137 +++ +E+I Sbjct: 1155 ERRKRRIEEI 1164 Score = 65.9 bits (159), Expect = 8e-10 Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 61/343 (17%) Frame = +2 Query: 761 KNVILADEMGLGKTVSACAFLSSLCCEFKI---------------NLPC----------- 862 K IL+DEMGLGKTV+A + + S + + NLP Sbjct: 526 KGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYAS 585 Query: 863 ---LVLVPLSTMPNWMAEF--ASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 L++VP+S + W EF A+ +P + Y+G S+++ T + K+K Sbjct: 586 KTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNV--SSLK---------TLLTKTK 634 Query: 1028 KSHKFNVLLTTYEMVLVDATY----------------LRSVPWEVLIVDEGHRXXXXXXX 1159 V+LTTY +V + T L SV + +I+DEGH Sbjct: 635 TPP--TVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTV 692 Query: 1160 XXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFE----EKFNELATA 1327 + + +LTGTP+ N + ++Y+L+ FL+ + + ++ F Sbjct: 693 TSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKNYK 752 Query: 1328 EKVEELKKLVAPHMLRRLK----KDA--MKNIPPKTERMVPVELTSIQAEYYRAMLTK-N 1486 + + + ++ P +LRR K KD + +PPK + + + Q Y+ +L K Sbjct: 753 QAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAE 812 Query: 1487 YQVLRNTGKGG---AHQSLLNIVMQLRKVCNHPYLIPGTEPES 1606 V +G + ++L +++LR+VC HP LI G++ E+ Sbjct: 813 VSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGLI-GSQDEN 854
>Q6BIP2:RAD5_DEBHA DNA repair protein RAD5 - Debaryomyces hansenii (Yeast) (Torulaspora| hansenii) Length = 1153 Score = 88.2 bits (217), Expect = 1e-16 Identities = 84/376 (22%), Positives = 159/376 (42%), Gaps = 47/376 (12%) Frame = +2 Query: 761 KNVILADEMGLGKTVSACAFLSSLCCEFKI-------------NLPCLVLVPLSTMPNWM 901 K ILADEMGLGKT+S A ++S+ + + L++VP+S + W Sbjct: 538 KGGILADEMGLGKTISTLALINSVPIDVMFEENKELEDKTIYASKTTLIIVPMSLLSQWQ 597 Query: 902 AEFASWAPHLN--VVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTYEMVL 1075 EF +LN Y+G D + + +KK V++TTY VL Sbjct: 598 KEFDKANNNLNHKCFIYYGDLATT-----------DLSPVLCNKKKDIPIVMITTYGTVL 646 Query: 1076 VDATY---------------LRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLT 1210 + T L SV + +++DEGH + +LT Sbjct: 647 NEFTRISNRRDAKGFLPKIGLFSVKFFRIVLDEGHNIRNRTAKTSKAIYEILLNRKWVLT 706 Query: 1211 GTPLQNNIGEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELKKLVAPHMLRR 1378 GTP+ N + ++Y+L+ FL+ + + + ++ F + ++ ++ +K ++ P +RR Sbjct: 707 GTPVINRLDDLYSLVKFLELEPWSNFSYWKTFVTLPFEQRKISQTLDVVKSILEPIFIRR 766 Query: 1379 LKKDAMKN------IPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGG----AHQ 1528 K N +PPK + V+ ++ + Y + Q ++ K G + Sbjct: 767 TKNMKQSNGKPLVELPPKEVVIEEVKFNEVEEKLYNWFKARASQSFKDGIKSGDLFKKYS 826 Query: 1529 SLLNIVMQLRKVCNHPYLIPGT---EPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDG 1699 +L +++LR+VC H L+ E E P S +++++++L + H+D Sbjct: 827 QILTHILRLRQVCCHVDLVGSANEMEQELVDPNTDLSEANGESDSISMVNNVLDLYHADN 886 Query: 1700 HRVLIFSQMTKLLDIL 1747 + F T++ ++ Sbjct: 887 NHDEKFKNNTEVRSVM 902 Score = 75.1 bits (183), Expect = 1e-12 Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 10/163 (6%) Frame = +2 Query: 1595 EPESGSPEFLHEMRI----KASAKLALLHSMLKVL--HSDGHRVLIFSQMTKLLDILEDY 1756 E E S F ++ + K S+K+ L + LK+L S +V++FSQ + LDI+E+ Sbjct: 991 EMEDPSQNFKFQLYLYDPTKTSSKIQCLINHLKILKEQSPNEQVVVFSQFSSYLDIIENE 1050 Query: 1757 LTLEF-GPKAFERVDGSVSVAERQAAITRFNQDKTR---FVFLLSTRSCGLGINLATADT 1924 L ++ + DG +++ ERQ + F+ K + LLS ++ G+G+NL TA Sbjct: 1051 LKIQILNDFVVYKFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTTASR 1110 Query: 1925 VIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 2053 + D ++P + Q ++R +RIG++ + V R ++ S+E+R Sbjct: 1111 AFMMDKWWSPSVEDQEIDRLNRIGKNMNVKVKRFIMDDSIEKR 1153
>Q6FY76:RAD5_CANGA DNA repair protein RAD5 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 1151 Score = 88.2 bits (217), Expect = 1e-16 Identities = 77/288 (26%), Positives = 136/288 (47%), Gaps = 8/288 (2%) Frame = +2 Query: 1298 EEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAML 1477 EE+ +E+ E +EL KL+ + + + + + P+E +S + Sbjct: 861 EEEEDEVPPFEN-DELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVF 919 Query: 1478 TKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKL 1657 K + L G +SL R+ N + + G + +H R + AKL Sbjct: 920 CK--ECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKGSDGILKLIHFDRKERPAKL 977 Query: 1658 ALLHSMLKVLH--SDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFE--RVDGSVSVAERQ 1825 L L+ L S G +V++FSQ + LDILE L + + + DG +S+ ER Sbjct: 978 NALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERT 1037 Query: 1826 AAITRFNQDK--TRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 A + F + V LLS ++ G+G+NL A + D ++P + QA++R HRIGQ Sbjct: 1038 AVLEDFKVKDYAVQKVLLLSLKAGGVGLNLTCASYAFMMDPWWSPSMEDQAIDRIHRIGQ 1097 Query: 2000 SNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKE--VEDI 2137 +N + V R V+ S+EE++L++ +K L + + +++ +E+I Sbjct: 1098 TNSVKVIRFVIDGSIEEKMLRIQDRKRTLGEAMDTDEDERRKRRIEEI 1145 Score = 67.4 bits (163), Expect = 3e-10 Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 61/340 (17%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFL-------------------SSLCCEFKINLP----------C 862 IL+DEMGLGKT+SA + + S+L + I + Sbjct: 510 ILSDEMGLGKTISALSLVLMRPKDEHTTSQSLFHQESSNLSSDDVIEIKEPERSYAYKTT 569 Query: 863 LVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKS--KKSH 1036 L++VP+S + W EF + + ++ G+ + + K+ + Sbjct: 570 LIIVPMSLLTQWRDEF-------------DKVNNNAGLTCELYYGGNVSSLKSLLIKRKN 616 Query: 1037 KFNVLLTTYEMVL-------VDATYLRS---------VPWEVLIVDEGHRXXXXXXXXXX 1168 V+LTTY +V D T +RS + + +I+DEGH Sbjct: 617 PPTVVLTTYGIVQNEWTKLSKDGTNIRSLGRTSGIFSIEFFRIILDEGHTIRNKSTITSK 676 Query: 1169 XXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE----KFNELATAEKV 1336 ++R +LTGTP+ N + ++Y+L+ FL+ + + +++ F E + Sbjct: 677 AVLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWSQIGYWKQFITNPFEERNFKQAF 736 Query: 1337 EELKKLVAPHMLRRLKK------DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVL 1498 + + ++ P +LRR K+ + + +PPK + ++L+ Q Y L + + Sbjct: 737 DVVNAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKKQKLIYEEFLQRAEKTF 796 Query: 1499 RNTGKGG----AHQSLLNIVMQLRKVCNHPYLIPGTEPES 1606 R+ + G + ++L +++LR+VC LI GT E+ Sbjct: 797 RSGLQSGDLLKKYSTILVHILRLRQVCCDSNLI-GTLDEN 835
>Q5ACX1:RAD5_CANAL DNA repair protein RAD5 - Candida albicans (Yeast)| Length = 1084 Score = 88.2 bits (217), Expect = 1e-16 Identities = 59/211 (27%), Positives = 114/211 (54%), Gaps = 15/211 (7%) Frame = +2 Query: 1550 QLRKVCNHPYLIPGTE----PESGSPEFLHEMRI----KASAKLALLHSMLKVLHSDG-- 1699 QL ++ N P G E + +P++ ++ + ++S+K+ L LK LHS Sbjct: 870 QLFRIRNQP--TKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKALHSQSPN 927 Query: 1700 HRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ---DKTRFVF 1870 +V++FSQ + LDI++ L L + DG +++ +R + FNQ D + Sbjct: 928 SKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQPLEDGKVAIL 987 Query: 1871 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEE 2050 LLS ++ G+G+NL TA + D ++P + QA++R HRIGQ+ + V R ++ S+E Sbjct: 988 LLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMENSIET 1047 Query: 2051 RILQLAKKKLMLDQLFVNKSESQKE--VEDI 2137 ++L++ ++K + + + E +++ +E+I Sbjct: 1048 KMLKIQERKKQIGEAVAAEEEERRKRRIEEI 1078 Score = 72.8 bits (177), Expect = 6e-12 Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 38/312 (12%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSL----CCEFKINLP-----CLVLVPLSTMPNWMAEFASWA 922 ILADEMGLGKT++ A ++S+ E K + P L++VP+S + W +EF Sbjct: 460 ILADEMGLGKTIATLALVNSVPYDNFPEPKSDRPYASQTTLIVVPMSLLFQWKSEFE--- 516 Query: 923 PHLNVVEYHGSARARSAIRQYEWHEGD-ATQIGKSKKSHKFNVLLTTYEMVLVDATYLR- 1096 + + ++R + E E + A + S V++TTY VL + T L Sbjct: 517 ------KCNNNSRHVCRLHYGEDQETNLAWSLCNPDNSKIPIVMITTYGTVLNEFTRLSK 570 Query: 1097 --------------SVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNI 1234 SV + +I+DEGH + +LTGTP+ N + Sbjct: 571 RRNSKGELPKVGLYSVKFFRIILDEGHNIRNRNTKTAKSVYELQSSRKWILTGTPIVNRL 630 Query: 1235 GEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELKKLVAPHMLRRLKKD---- 1390 ++Y+L FL+ + + + ++ F + ++ ++ +K ++ P LRR K Sbjct: 631 DDLYSLTKFLELDPWNNFSYWKTFVTLPFEQKKISQTLDVVKSILEPIFLRRTKSQKKNG 690 Query: 1391 -AMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGG----AHQSLLNIVMQL 1555 + +P K + ++ + + Y+ + Y K G + +L +++L Sbjct: 691 KPLVELPAKEVVIEQIKFNDDEEKLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRL 750 Query: 1556 RKVCNHPYLIPG 1591 R+VC H LI G Sbjct: 751 RQVCCHVDLIGG 762
>Q9U7E0:ATRX_CAEEL Transcriptional regulator ATRX homolog - Caenorhabditis elegans| Length = 1359 Score = 87.4 bits (215), Expect = 3e-16 Identities = 92/367 (25%), Positives = 139/367 (37%), Gaps = 53/367 (14%) Frame = +2 Query: 701 MLFPHQLEALNWLRKCWFKS--------KNVILADEMGLGKTVSACAFLSSLCCEFKINL 856 +L PHQ + ++ C +S ILA MGLGKT+ FL ++ KI Sbjct: 462 ILKPHQAHGIQFMYDCACESLDRLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGE 521 Query: 857 PC---LVLVPLSTMPNWMAEFASWA----PHLNVVE------YHGSARARSAIRQYEWHE 997 C LV+VP + + NW EF W L+ ++ Y R A++ WH Sbjct: 522 KCKRVLVVVPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTIEDRRRALKA--WHS 579 Query: 998 GDATQI----------------GKSKKSHKFNVLLTTYEMVLVD-ATYLRSVPWEVLIVD 1126 + K KK N L E D YL++ ++++ D Sbjct: 580 SKTPSVMIIGYDLFRILTVEDDPKKKKPKNRNRRL---EKAKEDFRKYLQNPGPDMVVCD 636 Query: 1127 EGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEK 1306 E H+ + R+ LTGTPLQNN+ E + ++NF++P + F + Sbjct: 637 EAHKLKNDDSALSKCMVKILTKRRICLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANR 696 Query: 1307 FNELATAEKVEELKKLVAPHMLRR-------LKKDAMKN--------IPPKTERMVPVEL 1441 F + + ++ L M RR LKK + IPPK E ++ V Sbjct: 697 FVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRQ 756 Query: 1442 TSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEF 1621 T Q Y A L G G + LL ++ HPY + Sbjct: 757 TERQCALYNAFLND------IVGDSGLSKRLLPDYHMFSRIWTHPYQL-----------V 799 Query: 1622 LHEMRIK 1642 LHE R++ Sbjct: 800 LHEQRME 806 Score = 77.0 bits (188), Expect = 3e-13 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGP---------------- 1777 S KL LL ++K G ++L+FSQ + L +++ L G Sbjct: 946 SNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNAEGE 1005 Query: 1778 --------KAFERVDGSVSVAERQAAITRFNQ--DKTRFVFLLSTRSCGLGINLATADTV 1927 + + +DGSV +R A T FN + + L+STR+ LG N+ A+ V Sbjct: 1006 ETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAANRV 1065 Query: 1928 IIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 2107 II+D+ +NP D Q++ R +R GQ+ + +YR + + ++EERI + K V++ Sbjct: 1066 IIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 1125 Query: 2108 SESQK 2122 ++ Q+ Sbjct: 1126 AQIQR 1130
>P34739:TTF2_DROME Transcription termination factor 2 - Drosophila melanogaster (Fruit| fly) Length = 1061 Score = 85.1 bits (209), Expect = 1e-15 Identities = 50/152 (32%), Positives = 91/152 (59%), Gaps = 3/152 (1%) Frame = +2 Query: 1640 KASAKLALLHSMLK--VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSV 1813 + S+K+ ++ +LK +L S + ++ SQ T +LDIL D+L+ + A ++G++ V Sbjct: 887 RPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKD--GVATLSLNGTIPV 944 Query: 1814 AERQAAITRFN-QDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1990 RQ + FN ++ + V LLS + G+G+NL A+ +++ D +NP + QA +R +R Sbjct: 945 KNRQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYR 1004 Query: 1991 IGQSNRLLVYRLVVRASVEERILQLAKKKLML 2086 +GQ +++Y+ + +VE+RI L KKL L Sbjct: 1005 VGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDL 1036 Score = 72.4 bits (176), Expect = 8e-12 Identities = 97/408 (23%), Positives = 161/408 (39%), Gaps = 56/408 (13%) Frame = +2 Query: 425 DQWCQPQRVIALRVSLDEVEEALIKWYGLP-YDECTWERLDEPIM-LKYVHLVTQ----F 586 +QW RV V V + + P D W+ L E + +K V+ Q F Sbjct: 342 EQWISALRVQQSNVPAVRVVKPTLNPPRAPSIDTLDWDELSEAVNEIKPVYTGAQGMATF 401 Query: 587 KNFECQALDRDVRGNCANARNRQELTVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSK- 763 N + L+ ++ + + VL + P LK ++ HQ AL W+ W + K Sbjct: 402 NNQKALTLE-SLKDLHVSLEDLPGPEVLAEDPVGLKVSLM-NHQKHALAWMS--WRERKL 457 Query: 764 --NVILADEMGLGKTVSACAFLSSLCCEFKINLP-------------------------- 859 ILAD+MGLGKT++ + S L C+ + Sbjct: 458 PRGGILADDMGLGKTLTMIS--SVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWK 515 Query: 860 -----------CLVLVPLSTMPNWMAEFASWAPH--LNVVEYHGSARARSAIRQYEWHEG 1000 LV+ P S + W +E S L V +HG+ R Sbjct: 516 SKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRET----------- 564 Query: 1001 DATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSV---PWEVLIVDEGHRXXXXXXXXXXX 1171 K K +++++TTY++V + L +V W +I+DE H Sbjct: 565 ------KGKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLA 618 Query: 1172 XXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKK 1351 ++R LTGTP+QN ++Y LL FL+ + F L ++ +K+ + +A L Sbjct: 619 VCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTW-KKWIDNKSAGGQNRLNL 677 Query: 1352 LVAPHMLRRLKKD-----AMKNIPPKTERMVPVELTSIQAEYYRAMLT 1480 L+ MLRR K + ++P K R++ + L + Y+ ++T Sbjct: 678 LMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMT 725
>Q6PCN7:HLTF_MOUSE Helicase-like transcription factor - Mus musculus (Mouse)| Length = 1003 Score = 85.1 bits (209), Expect = 1e-15 Identities = 50/153 (32%), Positives = 91/153 (59%), Gaps = 4/153 (2%) Frame = +2 Query: 1631 MRIKASAKL-ALLHSMLKVLHSDGH-RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGS 1804 M K+S+K+ AL+H+++++ D + + L+ SQ T L ++E L+ F R+DGS Sbjct: 821 MEWKSSSKINALMHALIELRTKDPNIKSLVVSQFTTFLSLIET--PLKASGFVFTRLDGS 878 Query: 1805 VSVAERQAAITRFNQDK--TRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1978 ++ +R +I RF + + + LLS ++ G+G+NL A V + D +NP A+ Q + Sbjct: 879 MAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFD 938 Query: 1979 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 R HR+GQ +++ + +V+ SVEE +L++ K Sbjct: 939 RCHRLGQKQEVIITKFIVKDSVEENMLKIQNTK 971 Score = 82.8 bits (203), Expect = 6e-15 Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 30/290 (10%) Frame = +2 Query: 863 LVLVPLSTMPNWMAEFASWAP---HLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 L++ PLS + NW+ +F HLN Y+G R R D+ + K Sbjct: 473 LIICPLSVLSNWIDQFGQHVKSEVHLNFYVYYGPDRIR-----------DSAWLSKQ--- 518 Query: 1034 HKFNVLLTTYEMVL-----VDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR 1198 +++LTTY ++ D + L S+ W +I+DEGH + R Sbjct: 519 ---DIILTTYNILTHDYGTKDDSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERR 575 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK---VEELKKLVAPHM 1369 +LTGTP+QN++ ++++LL+FL+ F + T + L+ L+ Sbjct: 576 WVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNIT 635 Query: 1370 LRRLKKDAMKNIP--PKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGG-------- 1519 LRR K +K P ER V ++ ++ E K YQ ++N GK Sbjct: 636 LRRTKTSKIKGKPVLELPERKVFIQHITLSEEE-----RKIYQSVKNEGKAAIGRYFTEG 690 Query: 1520 ---AHQS-LLNIVMQLRKVCNHPYLIPGTEPESG-----SPEFLHEMRIK 1642 AH + +L ++++LR++C H +L+ SG +PE L +M I+ Sbjct: 691 TVLAHYADVLGLLLRLRQICCHTHLLTNGMSSSGPSRSDTPEELRKMLIE 740
>Q5KPG8:RAD5_CRYNE DNA repair protein RAD5 - Cryptococcus neoformans (Filobasidiella| neoformans) Length = 1198 Score = 84.0 bits (206), Expect = 3e-15 Identities = 54/183 (29%), Positives = 100/183 (54%), Gaps = 3/183 (1%) Frame = +2 Query: 1586 PGTEPESGSPEFLHEMRIKASAKL-ALLHSMLKVLHSDGH-RVLIFSQMTKLLDILEDYL 1759 P + + + L ++ + S KL ALL + ++ D + L+FSQ T LD++E L Sbjct: 996 PNLKSSNDTTVTLGKVDLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATL 1055 Query: 1760 TLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR-FVFLLSTRSCGLGINLATADTVIIY 1936 T + + R DG++S A+R I F + + L+S ++ G+G+NL A+ V + Sbjct: 1056 TKQ--GIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLISLKAGGVGLNLTMANYVFLM 1113 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSES 2116 D+ +N + QA++R HR+GQ+ + V R +++ +VE+RI+++ + K L ++ Sbjct: 1114 DTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTALVNASLSNGAK 1173 Query: 2117 QKE 2125 KE Sbjct: 1174 TKE 1176 Score = 58.9 bits (141), Expect = 1e-07 Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 38/271 (14%) Frame = +2 Query: 911 ASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQI-----GKSKKSHKFNVLLTTYEMV- 1072 A W L + GS I Y W+ GD I G K+ + +V++T+Y + Sbjct: 606 AQWHDELRKMSQQGS------INSYVWYGGDRVDIEALLAGDGKE--RVDVIVTSYGTLT 657 Query: 1073 -------------------LVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQH 1195 L D +LR +++DE H Q Sbjct: 658 SEYQKWLRTKDRPNYEGGSLYDHEFLR------IVLDEAHNIRNRLAMVSKACYELKGQR 711 Query: 1196 RVLLTGTPLQNNIGEMYNLLNFLQPA---------SFPSLASFEEKFNELATAEKVEELK 1348 R LTGTP+ N + ++Y+LL+FL+ SF ++ + L + + E Sbjct: 712 RWALTGTPIVNRLEDLYSLLHFLRITPWGNYSFFRSFVTVPFLNQDHKALNVVQYILESC 771 Query: 1349 KLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAM---LTKNYQVLRNTGKG- 1516 L +R + ++PPKT + ++ + + + Y+ + K + L G+ Sbjct: 772 LLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIDLDADGRAM 831 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTEPESG 1609 + S+L ++M+LR+ +HP L+ G E G Sbjct: 832 SNYTSILAMLMKLRQCVDHPLLVLGKSGEDG 862
>Q6C2R8:RAD5_YARLI DNA repair protein RAD5 - Yarrowia lipolytica (Candida lipolytica)| Length = 1025 Score = 82.8 bits (203), Expect = 6e-15 Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 6/193 (3%) Frame = +2 Query: 1562 VCNHPYLIPGTEPESGSPEFLHEMRIKA------SAKLALLHSMLKVLHSDGHRVLIFSQ 1723 +C P + + E ++R+K S+KL L S LK L D V +FSQ Sbjct: 824 ICRQPAALKDIFEVERTGEDCKDIRLKKLSDRPRSSKLVALVSKLKQLPKDAKSV-VFSQ 882 Query: 1724 MTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGI 1903 T LDI++ L E +AF R DG++S +R + F K V L+S ++ G+G+ Sbjct: 883 FTSYLDIIQTELRRE-KIQAF-RFDGTLSRQQRTDVLKAFGLSKGS-VLLISLKTGGVGL 939 Query: 1904 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLM 2083 NL TA+ I D + + QA++R HR+GQ+ + V R +V SVEE++L++ ++K++ Sbjct: 940 NLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQTKDVHVTRFIVENSVEEKMLKIQQQKMV 999 Query: 2084 LDQLFVNKSESQK 2122 L + QK Sbjct: 1000 LAGTLGMSEQEQK 1012 Score = 61.2 bits (147), Expect = 2e-08 Identities = 71/324 (21%), Positives = 130/324 (40%), Gaps = 39/324 (12%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCCEFKINLPC-LVLVPLSTMPNWMAEFASWAPHLNVVEY 946 ILADEMGLGKT+S A + ++ C LV+ P+S + W E Sbjct: 437 ILADEMGLGKTISTLAMVYR-----DRHVGCTLVVAPMSLLWQWEQECE----------- 480 Query: 947 HGSARARSAIRQYEWHE-GDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVP------ 1105 R + Y +HE G + + K++ N+L+T+Y ++ ++++ Sbjct: 481 ------RVGLSTYVYHEKGADIDLDELFKTYSPNILITSYHTLVSHYGQIKALGGGLDRN 534 Query: 1106 -----------------WEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNI 1234 + +++DE H ++ LTGTP+ N + Sbjct: 535 VISETSSHERPKIFTKHFHRIVLDEAHVIKNRNTVSAKACCLLRATNKWALTGTPIHNRL 594 Query: 1235 GEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELKKLVAPHMLRRLKK----- 1387 +++++L FL A + + F E + ++ ++ P +LRR K Sbjct: 595 EDLFSILKFLGAAPWNDFIYWRNFITLPFQEGKIVSALMTVQCILEPIVLRRTKNMKQAD 654 Query: 1388 -DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT----GKGGAHQSLLNIVMQ 1552 + +P KT + V LT + Y +L + L+ + G + ++L +++ Sbjct: 655 GSPLVVLPKKTINIEKVALTDQERVIYSYVLARAQTSLQKSEASEAVGRNYLNILTQILR 714 Query: 1553 LRKVCNHPYLIPGTEPESGSPEFL 1624 LR+ C P LI E E + E L Sbjct: 715 LRQSCCDPALILRPEAEVPTDEQL 738
>Q4PGG5:RAD5_USTMA DNA repair protein RAD5 - Ustilago maydis (Smut fungus)| Length = 1387 Score = 81.6 bits (200), Expect = 1e-14 Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 6/156 (3%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSD--GHRVLIFSQMTKLLDILEDYLT-LEFGPKAFERVDGSV 1807 ++ S KL+ L S L L + + +IFSQ T LD++E LT F F R+DGS Sbjct: 1205 LRTSTKLSALISHLNTLRATEAAFKGVIFSQFTSFLDLIEPVLTRYRFH---FLRLDGST 1261 Query: 1808 SVAERQAAITRFNQDKTR---FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1978 R + F +FL+S ++ G+G+NL A+ + + D +N + QA++ Sbjct: 1262 PQKVRDKLVLEFQSPSPTNHVVLFLISLKAGGVGLNLTAANKIWLLDFWWNSSIENQAID 1321 Query: 1979 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLML 2086 R HR GQ++ + V+R +++ S+E+RIL + K+K ML Sbjct: 1322 RIHRFGQTSPVSVFRYIIKDSIEDRILLIQKRKDML 1357 Score = 55.5 bits (132), Expect = 1e-06 Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 34/283 (12%) Frame = +2 Query: 863 LVLVPLSTMPNWMAEF--ASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSH 1036 LV+ P+S + W E AS L V Y+ + + Q E S Sbjct: 740 LVVAPMSLIGQWRDELIRASAPGSLTPVLYYADTKG-DLLAQLE--------------SG 784 Query: 1037 KFNVLLTTYEMVLVD-----------------ATYLRSVPWEVLIVDEGHRXXXXXXXXX 1165 K +V++T+Y ++ + + L + W +I+DE H Sbjct: 785 KVDVVITSYGTLVTEYRRFLDGGGASNRHLSVSAPLYCIDWLRVILDEAHNIKNRSTMNA 844 Query: 1166 XXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQP---ASFPSLASFEEKFNELATAEKV 1336 + R LTGTP+ N + ++++LL FL+ F SF K + + + + Sbjct: 845 RACCDLVSRRRWALTGTPIINRLTDLFSLLKFLRVEPWGDFSFFNSFVCKPFQAKSTKAL 904 Query: 1337 EELKKLVAPHMLRRLKKDAMKN------IPPKTERMVPVELTSIQAEYYRAMLTKNYQVL 1498 + ++ ++ +LRR KK K+ +PPKT + +E + ++ Y + + Y Sbjct: 905 DVVQVILESVLLRREKKMKDKDGKPIVELPPKTIVVKELEFSELERRIYDNVYRRAYLQF 964 Query: 1499 RNTGKGGAHQSLLNIV----MQLRKVCNHPYLI--PGTEPESG 1609 + G L+++ M+LR+ HP L+ G++ +SG Sbjct: 965 ASLKANGTVTRNLSVIFSVLMRLRQAVCHPSLVLKAGSKVQSG 1007
>Q95216:HLTF_RABIT Helicase-like transcription factor - Oryctolagus cuniculus (Rabbit)| Length = 1005 Score = 81.3 bits (199), Expect = 2e-14 Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 25/295 (8%) Frame = +2 Query: 863 LVLVPLSTMPNWMAEFASWAP---HLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 L++ PLS + NW+ +F HLN Y+G R R D + K Sbjct: 476 LIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIR-----------DPALLSKQ--- 521 Query: 1034 HKFNVLLTTYEMVLVDA-----TYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR 1198 +++LTTY ++ D + L S+ W +I+DEGH + R Sbjct: 522 ---DIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERR 578 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK---VEELKKLVAPHM 1369 +LTGTP+QN++ ++++LL+FL+ F + T + L+ L+ Sbjct: 579 WVLTGTPIQNSLKDLWSLLSFLKLKPFVDREWWHRTIQRPVTMGDEGGLRRLQSLIKNIT 638 Query: 1370 LRRLKKDAMK-----NIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLR---NTGKGGAH 1525 LRR K +K +P + + + L+ + + Y+++ ++ + N G AH Sbjct: 639 LRRTKTSKIKGKPVLELPERPVFIQHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAH 698 Query: 1526 QS-LLNIVMQLRKVCNHPYLIPGTEPESG-----SPEFLHEMRIKASAKLALLHS 1672 + +L ++++LR++C H +L+ T SG +PE E+R K K+ L+ S Sbjct: 699 YADVLGLLLRLRQICCHTHLLTNTVSSSGPSGNDTPE---ELRKKLIKKMKLILS 750 Score = 76.6 bits (187), Expect = 4e-13 Identities = 47/153 (30%), Positives = 88/153 (57%), Gaps = 4/153 (2%) Frame = +2 Query: 1631 MRIKASAKL-ALLHSMLKVLHSDGH-RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGS 1804 M +S+K+ AL+H+++ + + + + L+ SQ T L ++E L+ F R+DGS Sbjct: 824 MEWTSSSKINALMHALIDLRTKNPNIKSLVVSQFTTFLSLIET--PLKASGFVFTRLDGS 881 Query: 1805 VSVAERQAAITRFNQDK--TRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1978 ++ +R +I F + + + LLS ++ G+G+NL A V + D +NP A+ Q + Sbjct: 882 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQRFD 941 Query: 1979 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 R HR+GQ +++ + +V+ SVEE +L++ K Sbjct: 942 RCHRLGQKQEVIITKFIVKDSVEENMLKIQNTK 974
>Q14527:HLTF_HUMAN Helicase-like transcription factor - Homo sapiens (Human)| Length = 1009 Score = 80.9 bits (198), Expect = 2e-14 Identities = 48/154 (31%), Positives = 91/154 (59%), Gaps = 4/154 (2%) Frame = +2 Query: 1628 EMRIKASAKL-ALLHSMLKVLHSDGH-RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDG 1801 +M +S+K+ AL+H++ + + + + L+ SQ T L ++E + L+ F R+DG Sbjct: 826 DMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIE--IPLKASGFVFTRLDG 883 Query: 1802 SVSVAERQAAITRFNQDK--TRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 S++ +R +I F + + + LLS ++ G+G+NL+ A V + D +NP A+ Q Sbjct: 884 SMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCF 943 Query: 1976 NRAHRIGQSNRLLVYRLVVRASVEERILQLAKKK 2077 +R HR+GQ +++ + +V+ SVEE +L++ KK Sbjct: 944 DRCHRLGQKQEVIITKFIVKDSVEENMLKIQNKK 977 Score = 79.3 bits (194), Expect = 7e-14 Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 30/300 (10%) Frame = +2 Query: 863 LVLVPLSTMPNWMAEFASWAP---HLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKS 1033 L++ PLS + NW+ +F HLN Y+G R R + Sbjct: 479 LIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIR-----------------EPALL 521 Query: 1034 HKFNVLLTTYEMVLVDA-----TYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR 1198 K +++LTTY ++ D + L S+ W +I+DEGH + R Sbjct: 522 SKQDIVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERR 581 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEK---VEELKKLVAPHM 1369 +LTGTP+QN++ ++++LL+FL+ F + T + L+ L+ Sbjct: 582 WVLTGTPIQNSLKDLWSLLSFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNIT 641 Query: 1370 LRRLKKDAMKNIP--PKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKG--------- 1516 LRR K +K P ER V ++ ++ E K YQ ++N G+ Sbjct: 642 LRRTKTSKIKGKPVLELPERKVFIQHITLSDEE-----RKIYQSVKNEGRATIGRYFNEG 696 Query: 1517 ---GAHQSLLNIVMQLRKVCNHPYLIPGTEPESG-----SPEFLHEMRIKASAKLALLHS 1672 + +L ++++LR++C H YL+ +G +PE E+R K K+ L+ S Sbjct: 697 TVLAHYADVLGLLLRLRQICCHTYLLTNAVSSNGPSGNDTPE---ELRKKLIRKMKLILS 753
>Q08562:RIS1_YEAST ATP-dependent helicase RIS1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 1619 Score = 80.1 bits (196), Expect = 4e-14 Identities = 45/153 (29%), Positives = 87/153 (56%) Frame = +2 Query: 1703 RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLST 1882 +++IFSQ T +ILE +L + + + GS++ R I F +D + + L+S Sbjct: 1463 KIIIFSQFTTFFEILEHFLKNKLNFPYLKYI-GSMNAQRRSDVINEFYRDPEKRILLISM 1521 Query: 1883 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 2062 ++ G+ L A+ V+I D +NP+ + QA +R +RI Q+ ++ V++L ++ SVE+RI + Sbjct: 1522 KAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISE 1581 Query: 2063 LAKKKLMLDQLFVNKSESQKEVEDIIRWGTEEL 2161 L K+K + V+ + +++++ G EL Sbjct: 1582 LQKRK----KEMVDSAMDPGKIKEVNSLGRREL 1610 Score = 79.3 bits (194), Expect = 7e-14 Identities = 80/345 (23%), Positives = 143/345 (41%), Gaps = 51/345 (14%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNV-ILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPL 880 L HQ L+WL + +K +LAD+MGLGKT+ A A + + E L++ P+ Sbjct: 943 LLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPV 1002 Query: 881 STMPNWMAEFAS--------------WAPHLNVVEYHGSARARSAIRQYE---------W 991 S + W E + + + V + AR + + Y+ W Sbjct: 1003 SVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANEFKKHW 1062 Query: 992 H---EGDATQIGKSKKSHKFNVLLTTYE----MVLVDATYLRSVPWEVLIVDEGHRXXXX 1150 +G+ Q+ N L T+ E D+T+ R +++DEG Sbjct: 1063 PKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYR------ILLDEGQNIKNK 1116 Query: 1151 XXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAE 1330 +R +L+GTP+QN++ E+Y+L+ FL+ + F+ Sbjct: 1117 NTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRN 1176 Query: 1331 K------------VEELKKLVAPHMLRRLKKD-----AMKNIPPKTERMVPVELTSIQAE 1459 K + +++ L+ MLRR K D + +PPK + L + + Sbjct: 1177 KQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELK 1236 Query: 1460 YYRAMLTKNYQV---LRNTGKGGAHQSLLNIVMQLRKVCNHPYLI 1585 +Y A+ +KN + L N G++ S+L ++++LR+ C H L+ Sbjct: 1237 FYTALESKNQALAKKLLNNSTRGSYSSVLTLLLRLRQACCHSELV 1281
>Q6CJM4:RAD5_KLULA DNA repair protein RAD5 - Kluyveromyces lactis (Yeast) (Candida| sphaerica) Length = 1114 Score = 79.7 bits (195), Expect = 5e-14 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 8/172 (4%) Frame = +2 Query: 1646 SAKLALLHSMLKVLH--SDGHRVLIFSQMTKLLDILEDYLT--LEFGPKAFERVDGSVSV 1813 S K+ L LK + S G ++++FSQ + LDILE L L + DG + + Sbjct: 938 STKIKALLRHLKQIQETSPGEQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDM 997 Query: 1814 AERQAAITRFNQDKTRFV--FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1987 ER + +F+ + LLS ++ G+G+NL A + D ++P + QA++R H Sbjct: 998 KERTRILEQFHDKDLSCIKLLLLSLKTGGVGLNLTCASRAFMMDPWWSPGMEDQAIDRIH 1057 Query: 1988 RIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--NKSESQKEVEDI 2137 RIGQ + V R ++ SVEE++L++ ++K ML + QK +E+I Sbjct: 1058 RIGQQQTVKVVRFIIDNSVEEKMLRIQERKRMLGDIVEGDEAERRQKRIEEI 1109 Score = 68.2 bits (165), Expect = 2e-10 Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 56/339 (16%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCC----EFKINLP-------------------------- 859 ILADEMGLGKT+SA A + + E KI Sbjct: 481 ILADEMGLGKTISALALICTASYDEAHEKKIESTKKPSMKEMSSQVDSSPLRHSQHKHDT 540 Query: 860 -----CLVLVPLSTMPNWMAEFASWAPHLN--VVEYHGSARARSAIRQYEWHEGDATQIG 1018 L++VP+S + W +EF L Y+G+ +R Y +G Sbjct: 541 YAYRTTLIVVPMSLLNQWQSEFEKANKDLKKRCEIYYGNNI--KDLRAYV--------LG 590 Query: 1019 KSKKSHKFNVLLTTYEMVLVD-----ATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXX 1183 + S V++TTY ++ + + L +V + +I+DEGH Sbjct: 591 PNAPS----VIITTYGIIQSEYGRTSTSGLFNVVFFRIILDEGHTIRNRSTRTSKAVIAL 646 Query: 1184 XXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELKK 1351 + +LTGTP+ N + ++++L+ FL + + ++ F + A+ + + Sbjct: 647 RSSRKWILTGTPIINRLDDLFSLVQFLNLEPWSHINYWKRYVSVPFEKGNYAQAFDVINA 706 Query: 1352 LVAPHMLRRLK--KDA----MKNIPPKTERMVPVELTSIQAEYYRAML-TKNYQVLRNTG 1510 ++ P +LRR K KD + ++PPK + ++L+S + Y++ML V Sbjct: 707 VLEPVLLRRTKNMKDVDGKPLVSLPPKEVIVEKLQLSSSEKRVYQSMLEDAENSVKEGLA 766 Query: 1511 KGGAHQSLLNI---VMQLRKVCNHPYLIPGTEPESGSPE 1618 KG ++ NI +++LR+VC H L+ T P+ G P+ Sbjct: 767 KGDLLKNYTNILVHILRLRQVCCHLDLLKKT-PDLGDPD 804
>Q9UNY4:TTF2_HUMAN Transcription termination factor 2 - Homo sapiens (Human)| Length = 1162 Score = 79.0 bits (193), Expect = 9e-14 Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 3/163 (1%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVL--HSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVS 1810 ++ S K++ L + L+ + +S + +I SQ T +L ++ L L+ + +DGSV+ Sbjct: 987 MRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVA--LHLKKHGLTYATIDGSVN 1044 Query: 1811 VAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1990 +R + FN + V L+S + G+G+NL + + + D +NP + QA +R +R Sbjct: 1045 PKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYR 1104 Query: 1991 IGQSNRLLVYRLVVRASVEERILQL-AKKKLMLDQLFVNKSES 2116 +GQ ++++R V +VEE+ILQL KKK + Q+ ES Sbjct: 1105 VGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSGES 1147 Score = 70.1 bits (170), Expect = 4e-11 Identities = 91/392 (23%), Positives = 162/392 (41%), Gaps = 37/392 (9%) Frame = +2 Query: 662 TVLIQQPKELKGGMLFPHQLEALNWLRKCWFKSKNV---ILADEMGLGKTVSACAFLSSL 832 TV+ + P LK +L HQ +AL WL W +S+ ILAD+MGLGKT++ A + + Sbjct: 557 TVVAEDPAGLKVPLLL-HQKQALAWL--LWRESQKPQGGILADDMGLGKTLTMIALILTQ 613 Query: 833 ----------------------CCEFKINLPCLVLVPLSTMPNWMAEFASW--APHLNVV 940 C+F + L++ P S + +W E + L V Sbjct: 614 KNQEKKEEKEKSTALTWLSKDDSCDFTSH-GTLIICPASLIHHWKNEVEKRVNSNKLRVY 672 Query: 941 EYHGSARARSA--IRQYEWHEGDATQIGKSKKSHKFNVLLTTYEM-VLVDATYLRSVPWE 1111 YHG R A + Y+ + + K ++K + + V +T L + W Sbjct: 673 LYHGPNRDSRARVLSTYDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWA 732 Query: 1112 VLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLA 1291 +I+DE H R +TGTP+QNN+ +MY+LL FL+ + F Sbjct: 733 RIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFN 792 Query: 1292 SFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKN-------IPPKTERMVPVELTSI 1450 + + + ++K E ++ +L R KD + + +P + ++ ++L+ Sbjct: 793 LWRSQVDN--GSKKGGERLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLKLSED 850 Query: 1451 QAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHE 1630 + Y ++ L++ K H+S N Q + N+P+ E S P Sbjct: 851 EETVYNVFFARSRSALQSYLK--RHESRGN---QSGRSPNNPFSRVALEFGSEEPRHSEA 905 Query: 1631 MRIKASAKLALLHSMLKVLHSDGHRVLIFSQM 1726 S+ + +L +L++ H L+ S + Sbjct: 906 ADSPRSSTVHILSQLLRLRQCCCHLSLLKSAL 937
>P79051:RHP16_SCHPO DNA repair protein rhp16 - Schizosaccharomyces pombe (Fission yeast)| Length = 861 Score = 77.4 bits (189), Expect = 3e-13 Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 5/171 (2%) Frame = +2 Query: 1640 KASAKLALLHSMLKVLHSDGHRV--LIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSV 1813 ++S K+ L L +L + ++FSQ T +LD++ + L ++DG ++ Sbjct: 687 RSSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLI--HWRLRKAGFNCVKLDGGMTP 744 Query: 1814 AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1993 R A I F+ D +FL+S ++ G+ +NL A V + D +N QAM+R HRI Sbjct: 745 KARAATIEAFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRI 804 Query: 1994 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSE---SQKEVEDI 2137 GQ + V L + S+E +I++L +KK + +++ E +Q VED+ Sbjct: 805 GQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKALNQLSVEDM 855 Score = 72.0 bits (175), Expect = 1e-11 Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 18/221 (8%) Frame = +2 Query: 671 IQQPKELKGGMLFPHQLEALNWLRKCWFKS-KNVILADEMGLGKTVSACAFLSSLCCEFK 847 I+QPKEL +L P Q E + WL++ S ILADEMG+GKT+ A L S Sbjct: 245 IEQPKELVLNLL-PFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALLLSE----P 299 Query: 848 INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSK 1027 P LV+ P+ + W E + H N A+ Y ++ G A I + Sbjct: 300 RGKPTLVVAPVVAIMQWKEEIDT---HTN-----------KALSTYLYY-GQARDISGEE 344 Query: 1028 KSHKFNVLLTTYEM-----------------VLVDATYLRSVPWEVLIVDEGHRXXXXXX 1156 S ++V+LT+Y + V+ + + L + + +I+DE H Sbjct: 345 LS-SYDVVLTSYNVIESVYRKERSGFRRKNGVVKEKSLLHQMEFYRIILDEAHGIKSRTC 403 Query: 1157 XXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 1279 ++ L+GTPLQN IGE+++LL FL+ F Sbjct: 404 NTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPF 444
>P31244:RAD16_YEAST DNA repair protein RAD16 - Saccharomyces cerevisiae (Baker's yeast)| Length = 790 Score = 77.4 bits (189), Expect = 3e-13 Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 2/161 (1%) Frame = +2 Query: 1640 KASAKLALLHSMLKVLHSDGHRV--LIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSV 1813 ++S K+ L L L S+ + ++FSQ T +LD++E L+ ++ GS+S Sbjct: 616 QSSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVE--WRLKRAGFQTVKLQGSMSP 673 Query: 1814 AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1993 +R I F + VFL+S ++ G+ +NL A V I D +NP + Q+ +R HRI Sbjct: 674 TQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRI 733 Query: 1994 GQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSES 2116 GQ + + R + S+E RI++L +KK + +N+ E+ Sbjct: 734 GQYRPVKITRFCIEDSIEARIIELQEKKANMIHATINQDEA 774 Score = 72.8 bits (177), Expect = 6e-12 Identities = 84/361 (23%), Positives = 138/361 (38%), Gaps = 67/361 (18%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNV----ILADEMGLGKTVSACAFLSSLCCEFKINLPCLVL 871 L P QLE L+WL + +++ +LADEMG+GKT+ A L + + P LV+ Sbjct: 184 LLPFQLEGLHWLIS---QEESIYAGGVLADEMGMGKTIQTIALLMNDLTKS----PSLVV 236 Query: 872 VPLSTMPNWMAEFASWAP-HLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNV 1048 P + W E L + YHG++R K ++V Sbjct: 237 APTVALMQWKNEIEQHTKGQLKIYIYHGASRTTDI-----------------KDLQGYDV 279 Query: 1049 LLTTY---EMVLVDATY--------------LRSVPWEVLIVDEGHRXXXXXXXXXXXXX 1177 +LTTY E V Y L ++ + +I+DE H Sbjct: 280 VLTTYAVLESVFRKQNYGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVN 339 Query: 1178 XXXXQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP-------SLASFEEKFN-------- 1312 Q R L+GTPLQN IGEMY+L+ FL F AS + KF Sbjct: 340 NLKTQKRWCLSGTPLQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHC 399 Query: 1313 ------------------------ELATAEKVEELKKLVAPHMLRRLKKDAMKN--IPPK 1414 E E ++ L+ MLRR K + + +PP+ Sbjct: 400 SHVIMQHTNFFNHFMLKNIQKFGVEGPGLESFNNIQTLLKNIMLRRTKVERADDLGLPPR 459 Query: 1415 TERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGA----HQSLLNIVMQLRKVCNHPYL 1582 + + + YR++ T + + + + G + ++ ++ ++R++ +HP L Sbjct: 460 IVTVRRDFFNEEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDL 519 Query: 1583 I 1585 + Sbjct: 520 V 520
>Q5BHD6:RAD5_EMENI DNA repair protein rad5 - Emericella nidulans (Aspergillus nidulans)| Length = 1202 Score = 69.3 bits (168), Expect = 7e-11 Identities = 72/323 (22%), Positives = 134/323 (41%), Gaps = 52/323 (16%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSSLCCEFKINLP----------------------CLVLVPLS 883 ILADEMGLGKT+ + + S NLP LV+ P+S Sbjct: 514 ILADEMGLGKTIEMLSLVHS-----HRNLPPTQSLGNLTRLPVSGVVPAPYTTLVVAPMS 568 Query: 884 TMPNWMAEF--ASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 + W E AS + V+ Y+G+ + + ++ + + N++LT Sbjct: 569 LLAQWEGEALKASRNGSMKVLMYYGNEK-----------NVNLREMCSAGNAAAPNMILT 617 Query: 1058 TYEMVLVDATY--------------LRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQH 1195 +Y +V+ + L SV + +I+DE H H Sbjct: 618 SYGVVMSEHRTHQALAPGTSWTPGNLFSVDFFRVILDEAHIIKNRRSKTARACYDLKATH 677 Query: 1196 RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFE----EKFNELATAEKVEELKKLVAP 1363 R +LTGTP+ N + ++++L+ FL+ + + + ++ F + ++ ++ P Sbjct: 678 RWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWKTFITAPFESKEVVRAISVVQTVLEP 737 Query: 1364 HMLRRLKK------DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGG-- 1519 +LRR K + + +P +T R+ VEL + E Y + T+ Q + G Sbjct: 738 LVLRRTKSMKTPEGEPLVPLPKRTIRIEKVELIEQEREIYNHIYTRAKQTFNSNVAAGTL 797 Query: 1520 --AHQSLLNIVMQLRKVCNHPYL 1582 ++ ++ +++LR+ C HP L Sbjct: 798 LKSYSTIFAQLLRLRQTCCHPIL 820 Score = 63.5 bits (153), Expect = 4e-09 Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 34/179 (18%) Frame = +2 Query: 1646 SAKL-ALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAER 1822 SAK+ ALL +++V G + ++FSQ T LD++ LT +F R+DG+++ R Sbjct: 998 SAKIHALLAHLVRV--PAGTKSVVFSQFTSFLDLIGPQLTK--AGISFVRLDGTMAQKAR 1053 Query: 1823 QAAITRFNQDKT---------------------------------RFVFLLSTRSCGLGI 1903 + +F + +T V L+S ++ G+G+ Sbjct: 1054 AEVLAQFTKFETFTQEELDQAESTSAPSGLTPTPKTPKQSSSPSSPTVLLISLKAGGVGL 1113 Query: 1904 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL 2080 NL A V + D ++ + QA++R HR+GQ + V R +V+ S+EER+L++ ++K+ Sbjct: 1114 NLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQLRDVNVVRFIVKDSIEERMLRVQERKM 1172
>Q06554:YL247_YEAST Uncharacterized ATP-dependent helicase YLR247C - Saccharomyces| cerevisiae (Baker's yeast) Length = 1556 Score = 68.6 bits (166), Expect = 1e-10 Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 9/215 (4%) Frame = +2 Query: 1622 LHEMRIKAS--AKLALLHSMLKVL-------HSDGHRVLIFSQMTKLLDILEDYLTLEFG 1774 +H++ IK S AK+ + ++ L ++D +V+++SQ T+ L ++ L L + Sbjct: 1345 VHQIHIKESFGAKIDFVIKLISYLRLKSEQENADPPQVILYSQKTEYLKVIGKVLKL-YH 1403 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 + + + +V E I F + + LL+ ++ G G+NL A + + D N Sbjct: 1404 IEHLACLSNTANVGE---TINNFKRQPSVTCLLLNVKTLGAGLNLINAKHIFLLDPILNN 1460 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 ++QAM R +RIGQ V+ ++R +VEE IL + K +L++ + E K+ + Sbjct: 1461 SDELQAMGRNNRIGQDEETFVWNFMIRNTVEENIL---RYKCILEER--KRKEKSKKGD- 1514 Query: 2135 IIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIE 2239 + ++ + DN+E+ DAK ++S ++ Sbjct: 1515 ----------KYDEAQDETDNEESDDAKFEISVVD 1539
>Q4WVM1:RAD5_ASPFU DNA repair protein rad5 - Aspergillus fumigatus (Sartorya fumigata)| Length = 1245 Score = 67.8 bits (164), Expect = 2e-10 Identities = 71/321 (22%), Positives = 135/321 (42%), Gaps = 50/321 (15%) Frame = +2 Query: 770 ILADEMGLGKTVSACAFLSS-------------------LCCEFKINLPC----LVLVPL 880 ILADEMGLGKT+ + + S + LP LV+ P Sbjct: 561 ILADEMGLGKTIEMLSLIHSHRNVSPSRQGPSSSTELVRMPSSSSAILPAPNTTLVVAPT 620 Query: 881 STMPNWMAEF--ASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLL 1054 S + W +E AS + V+ Y+G ++ + ++ + N+++ Sbjct: 621 SLLSQWESEAMKASEQGTMKVLMYYGVDKSTNL-----------QELCSAGNPAAPNIII 669 Query: 1055 TTYEMVLVDATYLR-----------SVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 T+Y +VL ++ L SV + +I+DE H HR Sbjct: 670 TSYGVVLSESRQLAMFNSNTQGGLFSVDFFRVILDEAHVIKNRRSKTARACYELRATHRW 729 Query: 1202 LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEE----KFNELATAEKVEELKKLVAPHM 1369 +LTGTP+ N + ++++L+ FLQ + + + ++ F + ++ ++ P + Sbjct: 730 VLTGTPIVNRLEDLFSLVRFLQVEPWNNFSFWKTFITVPFESKDYVRALNVVQTVLEPLV 789 Query: 1370 LRRLKK------DAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGG---- 1519 LRR K + + +P +T +V VEL+ + E Y + T+ + + + G Sbjct: 790 LRRTKTMKTPEGEPLVPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLK 849 Query: 1520 AHQSLLNIVMQLRKVCNHPYL 1582 + ++ +++LR+ C HP L Sbjct: 850 SFSTIFAQILRLRQTCCHPIL 870 Score = 60.5 bits (145), Expect = 3e-08 Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 32/173 (18%) Frame = +2 Query: 1658 ALLHSMLKVLHS--DGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAA 1831 A +H+++ L+ + ++FSQ T LD++ LT ++ R+DG++ R Sbjct: 1043 AKIHALINHLNRVPANTKSVVFSQFTSFLDLIGAQLTK--AGISYVRLDGTMPQKARAEV 1100 Query: 1832 ITRFNQDKTRF------------------------------VFLLSTRSCGLGINLATAD 1921 + FN+ +T V L+S R+ G+G+NL A Sbjct: 1101 LAEFNRTETFHQEEIDEDEGPDTPRVRISSKNSRSSPKSPAVLLISLRAGGVGLNLTAAS 1160 Query: 1922 TVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL 2080 V + D ++ + QA++R HR+GQ + V R +V+ S+E R+L++ ++K+ Sbjct: 1161 NVFMMDPWWSFAIEAQAIDRVHRMGQLRDVSVTRFIVKDSIEGRMLRVQERKM 1213
>Q7VKV0:RAPA_HAEDU RNA polymerase-associated protein rapA - Haemophilus ducreyi| Length = 973 Score = 66.6 bits (161), Expect = 5e-10 Identities = 108/482 (22%), Positives = 186/482 (38%), Gaps = 43/482 (8%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + V+LADE+GLGKT+ A L ++ LVLVP S Sbjct: 152 LIPHQLHIAKEVGQR--VAPRVLLADEVGLGKTIEAGMILQQQLFSGRVER-VLVLVPES 208 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTT- 1060 W+ E L + S ++ + D I ++ + V+ + Sbjct: 209 LQHQWLVEM------LRRFNLNFSLFDEERCSDFDKTDEDGNDISENPFESEALVIASID 262 Query: 1061 -YEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPL 1222 E AT + W++LIVDE H + +LLT TP Sbjct: 263 WLEKATTRATQVLLADWDLLIVDEAHHLVCSATESSQAYQFVARLAKKITAVLLLTATPE 322 Query: 1223 QNNIGEMYNLLNFLQPASFPSLASF---EEKFNELATA-------EKVEELKKLVAPHML 1372 Q + + L L P F A+F ++ + +A A + + ++ K +L Sbjct: 323 QLGLDSHFARLALLDPDRFYDYATFIAEQKAYKPVADAVANLLNDKPLNDMAKNAIAELL 382 Query: 1373 RRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQ---VLRNTGKGGA------- 1522 + M I +E+ + ++ E A++ ++ + RNT +G Sbjct: 383 SEQDTEPMFKII-NSEKSAESDRLQVRQELINALIDRHGTSRVLFRNTRQGVKGFPHRVY 441 Query: 1523 HQSLLNIVMQLRKVCNHPYLIPGTEPESGS-PEFLHEMRIKASA----------KLALLH 1669 HQ L + Q N ++ EP+ PE L++ + ++A L Sbjct: 442 HQITLEMPDQYANALNVRAMMGSMEPQDHFYPERLYQCLNSQAPMGNRWEDFDPRIAWLM 501 Query: 1670 SMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSV-----SVAERQAAI 1834 + LK H D +VLI + ++ L L + E + +V ++ ER A Sbjct: 502 TFLKN-HRD-EKVLIICKQAEIAITLAQVL------REREAIRTAVFHEHMTIVERDRAA 553 Query: 1835 TRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLL 2014 F Q + L+S+ G N A +++++ NP Q++ R RIGQ N + Sbjct: 554 AYFAQIEEGAQVLISSSIGSEGRNFQFARNLVLFNLPDNPDLLEQSIGRLDRIGQKNDIQ 613 Query: 2015 VY 2020 +Y Sbjct: 614 IY 615
>Q149N8:SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH - Homo sapiens (Human)| Length = 1683 Score = 65.5 bits (158), Expect = 1e-09 Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%) Frame = +2 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKL-ALLHSMLKV-LH 1690 G+H+S + + R+ +H + E + E ++ S K+ A++ +++K+ L Sbjct: 1467 GSHRSSIKCAI-CRQTTSHKEISYVFTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLR 1525 Query: 1691 SDGHRVLIFSQMTKLLDILEDYLT---LEFGPKAFERVDGSVSVAERQAAITRFNQDKTR 1861 G + L+FS +LDI+ LT +EF + V Q ++ F +D Sbjct: 1526 DPGAKALVFSTWQDVLDIISKALTDNNMEFAQIS--------RVKTFQENLSAFKRDPQI 1577 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 2041 + LL + G+ + A V++ + NP ++QA+ R HRIGQ+ +V+R +++A+ Sbjct: 1578 NILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKAT 1637 Query: 2042 VEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDE 2179 +EER+ + K ++ N S E + +LF E Sbjct: 1638 IEERMQAMLK---TAERSHTNSSAKHSEASVLTVADLADLFTKETE 1680 Score = 34.7 bits (78), Expect = 2.0 Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 15/182 (8%) Frame = +2 Query: 1091 LRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQP 1270 L +V W + +DE +R ++GTP+Q + +++ L+ FL Sbjct: 808 LVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 867 Query: 1271 ASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMK--NIPPKTERMVPVELT 1444 + + + + L +A + R KKD + IPP+TE + + + Sbjct: 868 EPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKILWRSAKKDVIDQIQIPPQTEEIHWLHFS 927 Query: 1445 SIQAEYY-------------RAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLI 1585 ++ +Y + ++ + ++ S+L +++LR+ C HP + Sbjct: 928 PVERHFYHRQHEVCCQDVVVKLRKISDWALKLSSLDRRTVTSILYPLLRLRQACCHPQAV 987 Query: 1586 PG 1591 G Sbjct: 988 RG 989
>Q7TPQ3:SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH - Mus musculus (Mouse)| Length = 1674 Score = 63.9 bits (154), Expect = 3e-09 Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 2/223 (0%) Frame = +2 Query: 1517 GAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKL-ALLHSMLKV-LH 1690 G+H+S + + R+ +H + E + E ++ S K+ A++ +++K+ L Sbjct: 1458 GSHRSSIKCAI-CRQTTSHKEVSYVFTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLR 1516 Query: 1691 SDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVF 1870 G + L+FS +LDI+ LT F ++ + E +A F D + Sbjct: 1517 DPGAKALVFSTWQDVLDIISKALT--DNNMEFTQISRIKTFQENLSA---FKYDPHINIL 1571 Query: 1871 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEE 2050 LL + G+ + A V++ + NP ++QA+ R HRIGQ+ +V+R +++A++EE Sbjct: 1572 LLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEE 1631 Query: 2051 RILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDE 2179 R+ + K ++ + S E + G +LF +E Sbjct: 1632 RMQAMLK---TAERSHTSSSGKHSEASVLTVAGLADLFTKENE 1671 Score = 37.4 bits (85), Expect = 0.30 Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 15/182 (8%) Frame = +2 Query: 1091 LRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRVLLTGTPLQNNIGEMYNLLNFLQP 1270 L +V W + +DE +R ++GTP+Q + +++ L+ FL Sbjct: 799 LVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGI 858 Query: 1271 ASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMK--NIPPKTERMVPVELT 1444 + + + + L +A M R KKD + IPP+TE M + + Sbjct: 859 EPYCVKHWWIRLLYHPYCKKNPQHLYSFIAKIMWRSAKKDVIDQIQIPPQTEEMHWLHFS 918 Query: 1445 SIQAEYY-------------RAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLI 1585 ++ +Y + ++ + ++ S+L +++LR+ C HP + Sbjct: 919 PVERHFYHRQHEVCCQDAIVKLRKISDWALKLSSLDRRTVSSILYPLLRLRQACCHPQAV 978 Query: 1586 PG 1591 G Sbjct: 979 RG 980
>Q88NR0:RAPA_PSEPK RNA polymerase-associated protein rapA - Pseudomonas putida (strain| KT2440) Length = 948 Score = 56.6 bits (135), Expect = 5e-07 Identities = 109/471 (23%), Positives = 179/471 (38%), Gaps = 39/471 (8%) Frame = +2 Query: 767 VILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEY 946 V+LADE+GLGKT+ A + + + L+LVP + W+ E +L V + Sbjct: 173 VLLADEVGLGKTIEAGLVIHRQLLSGRASR-VLILVPENLQHQWLVEMRRRF-NLQVALF 230 Query: 947 HGSARARSAIRQYEWHEGDATQIGKSKKSHKFN---VLLTTYEMVLVDATY---LRSVPW 1108 DA + +S S+ F + L E ++ D L + W Sbjct: 231 ------------------DAERFIESDASNPFEDAQLALVALEWLVDDEKAQDALFAAGW 272 Query: 1109 EVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV-----LLTGTPLQNNIGEMYNLLNFLQPA 1273 ++L+VDE H +V LLT TP Q + L L P Sbjct: 273 DLLVVDEAHHLVWHEDQVSAEYGLVEQLAQVIPGVLLLTATPEQLGQDSHFARLRLLDPN 332 Query: 1274 SFPSLASFE-EKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVEL--- 1441 F LA+F E + AE V+EL L + + + + + E ++ Sbjct: 333 RFHDLAAFRAESEHYRPVAEAVQEL--LDEGRLSPKAHATILGFLGAEGEALLAAVSDGD 390 Query: 1442 TSIQAEYYRAMLTKN---YQVLRNTG---KGGAHQSLLNIVMQLRKVCNHPYLIPGTE-- 1597 T A R +L ++ + RNT +G + L HPY +P E Sbjct: 391 TQASARLIRELLDRHGTGRVLFRNTRAAIQGFPERQL------------HPYPLPTPEQY 438 Query: 1598 ---PESGSPEFLHEMRIKASAKLA-------------LLHSMLKVLHSDGHRVLIFSQMT 1729 P E E+ +A ++A L LK+L +VL+ Sbjct: 439 RDLPAGEHAELYPEVAFQAQGEVADDERWWRFDPRVDWLIDTLKMLKRT--KVLVICAHA 496 Query: 1730 KLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINL 1909 + LED L + G A +G +S+ ER A F ++ L+ + G N Sbjct: 497 ETAMDLEDALRVRSGIPASVFHEG-MSILERDRAAAYFADEEFGAQVLICSEIGSEGRNF 555 Query: 1910 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 2062 A ++++D +P Q + R RIGQ + + ++ ++ S +ER+ Q Sbjct: 556 QFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSPQERLFQ 606
>Q8EJ93:RAPA_SHEON RNA polymerase-associated protein rapA - Shewanella oneidensis| Length = 968 Score = 56.2 bits (134), Expect = 6e-07 Identities = 118/545 (21%), Positives = 212/545 (38%), Gaps = 56/545 (10%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSS--LCCEFKINLPCLVLVP 877 L PHQ+ + + + + + V+LADE+GLGKT+ A + L C + L++VP Sbjct: 153 LIPHQMWIAHEVGRRY--APRVLLADEVGLGKTIEAGLIIHQQLLTCRAE---RVLIIVP 207 Query: 878 LSTMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 + W+ E R +R + E + + + Sbjct: 208 DTLRHQWLVEMLR----------------RFNLRFSVFDEDRCVEAFADHDNPFY----- 246 Query: 1058 TYEMVLVDATYLRS---------VPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV--- 1201 T ++V+ LR W++L+VDE H V Sbjct: 247 TEQLVICSLELLRKKKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVEALSEVVPG 306 Query: 1202 --LLTGTPLQNNIGEMYNLLNFLQPASFPSLASF---EEKFNELATAEKVEELKKLVAPH 1366 LLT TP Q + L L P F +F E + ++A A + + ++ + Sbjct: 307 VLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEENSYKDVAIAAEALAGESKLSDY 366 Query: 1367 MLRRLKKD-AMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVL---RNTGKGGAHQSL 1534 + L + + K+I P R++ E I +E +A ++ Q L TG+ S Sbjct: 367 AINSLTELLSEKDIAPSI-RLIQAE--GIDSELQQAARSELLQELLDRHGTGRVLYRNSR 423 Query: 1535 LNIVMQLRKVCN-HPYLIP--------------------GTEPESGSPEFLHEMRIKASA 1651 ++ +++ N +P+ +P ++ SPE L++ SA Sbjct: 424 ASVKGFPKRIFNAYPHAMPEQYLTAARVNDMMGGRKSLEAKAAQALSPEKLYQEFEDNSA 483 Query: 1652 -------KLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVS 1810 ++ L LK S +VLI + LE+ L G +A +G +S Sbjct: 484 SWWKFDPRVDWLIEFLKSHRSK--KVLIIASGADTALSLEEALRTREGIQATVFHEG-MS 540 Query: 1811 VAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1990 + ER A F Q++ L+ + G N A ++++D NP Q + R R Sbjct: 541 IIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR 600 Query: 1991 IGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQL-----FVNKSESQKEVEDIIRWGTE 2155 IGQ N + ++ ++ + +ER+LQ + L +L + SE +E+ +++ G E Sbjct: 601 IGQKNDIQIHLPYLQDTAQERLLQWYHQGLNAFELTCPGGHILFSEFAEELLNVLVGGDE 660 Query: 2156 ELFRN 2170 + N Sbjct: 661 DELTN 665
>Q87LD0:RAPA_VIBPA RNA polymerase-associated protein rapA - Vibrio parahaemolyticus| Length = 969 Score = 53.1 bits (126), Expect = 5e-06 Identities = 119/607 (19%), Positives = 219/607 (36%), Gaps = 46/607 (7%) Frame = +2 Query: 338 SESELRTLAKRKLENYKAKYGMGLINICKDQWCQPQRVIALRVSLDEVEEALIKWYGLPY 517 + E R A+ + + +G + C++ W +L+V +E L ++G Sbjct: 36 ASEENRVYARNDAPVTRVTFNVGDVIDCQEGW-------SLKVEEVLEDEGLYTYFGTRE 88 Query: 518 DECTWERLDEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARN----RQELTVLIQQPK 685 D + ++L+ + L Q + + Q D+ G N + LT +Q K Sbjct: 89 DT-----QETAVVLREIFLSNQIRFNKPQ--DKLYAGQIDRMDNFVLRYRALTNQFEQHK 141 Query: 686 ELKGGM------LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFK 847 G+ L PHQL + + + + V+LADE+GLGKT+ A + + Sbjct: 142 SPMRGLCGMRAGLIPHQLYIAHEVGRR--HAPRVLLADEVGLGKTIEAGMIIHQQVLSGR 199 Query: 848 INLPCLVLVPLSTMPNWMAEFAS-WAPHLNVVEYHGSARA-RSAIRQYEWHEGDATQIGK 1021 L++VP + W+ E + H ++ + A A ++ + + Sbjct: 200 AER-ILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFADAENPFDTQQYVLCSLDF 258 Query: 1022 SKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR- 1198 +KS K +E L W++L+VDE H Sbjct: 259 LRKSRK------RFEQALEGE-------WDLLVVDEAHHLEWSQDKPSREYQVVEGLAER 305 Query: 1199 ----VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF---EEKFNELATA---------- 1327 +LLT TP Q + L L P F +F EE++ +A A Sbjct: 306 TPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLFSGEKL 365 Query: 1328 --EKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RAMLTKNYQ 1492 E ++ +L++ + L + N + + EL + + R + Sbjct: 366 PDEAKNQITELLSEQDVEPLFRIIESNSDEEAKASARQELIDNLMDRHGTGRVLFRNTRA 425 Query: 1493 VLRNTGKGGAHQSLLNIVMQLR-----------KVCNHPYLIPGTEPESGSPEFLHEMRI 1639 ++ H ++I Q K+ + + PE EF + Sbjct: 426 AIKGFPTRNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFEGDDAS 485 Query: 1640 KASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAE 1819 + + KV G ++L+ + LE L G +A +G +S+ E Sbjct: 486 WWQFDSRVNWLLEKVKEKRGEKILVIASRASTALQLEQALREREGIRATVFHEG-MSILE 544 Query: 1820 RQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 R A F Q++ L+ + G N A+ ++++D FNP Q + R RIGQ Sbjct: 545 RDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQ 604 Query: 2000 SNRLLVY 2020 + + ++ Sbjct: 605 NRDIDIH 611
>P0C2N8:DRS1_NEUCR ATP-dependent RNA helicase drs-1 - Neurospora crassa| Length = 829 Score = 50.8 bits (120), Expect = 3e-05 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 11/201 (5%) Frame = +2 Query: 1661 LLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITR 1840 LLH + K ++++ RV+IF + K+ + L FG E + GS++ A+R ++ Sbjct: 529 LLH-ICKTIYTE--RVIIFFRQKKIAHKMRIIFGL-FGLSCAE-LHGSMNQAQRIQSVED 583 Query: 1841 FNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 F K F LL+T G+++ DTVI Y++ P + + R R G+S + Sbjct: 584 FRDGKVNF--LLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITL 641 Query: 2021 -----RLVVRASVEERILQLAK-KKLMLDQLFVNK-----SESQKEVEDIIRWGTEELFR 2167 R VV+A+V+ Q AK ++D +K E + E+E+I++ EE Sbjct: 642 AAEPDRKVVKAAVKAGKSQGAKISSRIIDPADADKWQAEIDELEDEIEEIMQEEKEEKQL 701 Query: 2168 NNDEVNGKDNDEASDAKHDVS 2230 N E+ K + + ++S Sbjct: 702 QNMEMQVKKGENMIKYEDEIS 722
>Q9KP70:RAPA_VIBCH RNA polymerase-associated protein rapA - Vibrio cholerae| Length = 969 Score = 49.3 bits (116), Expect = 8e-05 Identities = 109/519 (21%), Positives = 177/519 (34%), Gaps = 65/519 (12%) Frame = +2 Query: 659 LTVLIQQPKELKGGM------LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAF 820 LT QQ K G+ L PHQL + + + + V+LADE+GLGKT+ A Sbjct: 133 LTNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRR--HAPRVLLADEVGLGKTIEAGMI 190 Query: 821 LSSLCCEFKINLPCLVLVPLSTMPNWMAEFAS-WAPHLNVVEYHGSARARS-AIRQYEWH 994 + + L++VP + W+ E + H ++ + A S A +E Sbjct: 191 IHQQVLTGRAER-ILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFSEADNPFETQ 249 Query: 995 EGDATQIGKSKKSHKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXX 1174 + + +KS + +E L W++L+VDE H Sbjct: 250 QYVLCSLDFLRKSRQ------RFEQAL-------EAEWDLLVVDEAHHLEWHPEKPSREY 296 Query: 1175 XXXXXQHR-----VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF-------------- 1297 +LLT TP Q + L L F +F Sbjct: 297 QVIEALAEQTPGVLLLTATPEQLGRESHFARLRLLDADRFYDYEAFVKEEEQYAPVADAV 356 Query: 1298 -------------EEKFNELATAEKVEELKKLVAPH------------------------ 1366 + K EL + + VE L K + H Sbjct: 357 TALFSGEKLSDEAKNKITELLSEQDVEPLFKALESHASEDEIALARQELIDNLMDRHGTG 416 Query: 1367 -MLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNI 1543 +L R + A+K P + ++P+E+ S +Y +M + T + A + L Sbjct: 417 RVLFRNTRAAIKGFPVRNVHLLPLEIPS---QYTTSMRVAGMLGGKLTPEARAMKMLY-- 471 Query: 1544 VMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQ 1723 PE EF E + + KV ++L+ + Sbjct: 472 ------------------PEEIFQEFEGEESSWWQFDSRVNWLLEKVKAKRSEKILVIAS 513 Query: 1724 MTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGI 1903 LE L G +A +G +S+ ER A F Q++ L+ + G Sbjct: 514 RASTALQLEQALREREGIRATVFHEG-MSIIERDKAAAYFAQEEGGAQVLICSEIGSEGR 572 Query: 1904 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 N A+ ++++D FNP Q + R RIGQ + VY Sbjct: 573 NFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDVY 611
>Q87XS2:RAPA_PSESM RNA polymerase-associated protein rapA - Pseudomonas syringae pv.| tomato Length = 948 Score = 49.3 bits (116), Expect = 8e-05 Identities = 103/463 (22%), Positives = 167/463 (36%), Gaps = 31/463 (6%) Frame = +2 Query: 767 VILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEY 946 V+LADE+GLGKT+ A + + N L+LVP + W+ E +L V + Sbjct: 173 VLLADEVGLGKTIEAGLVIHRQLLSGRAN-RVLILVPENLQHQWLVEMRR-RFNLQVALF 230 Query: 947 HGSARARSAIRQYEWHEGDATQIGKSKKSHKF---NVLLTTYEMVLVD---ATYLRSVPW 1108 DA + +S + F + L E ++ D L + W Sbjct: 231 ------------------DAERFMESDAGNPFEDTQLALVALEWLVEDEKAQDALFAAGW 272 Query: 1109 EVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV-----LLTGTPLQNNIGEMYNLLNFLQPA 1273 ++++VDE H V LLT TP Q + L L P Sbjct: 273 DLMVVDEAHHLVWHEEKASREYSLVEQLAEVIAGVLLLTATPEQLGQDSHFARLRLLDPN 332 Query: 1274 SFPSLASFE-EKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSI 1450 F L +F E N A+ V+EL +L A K I L ++ Sbjct: 333 RFHDLKAFRAESENYRPVAQAVQELLD------KGKLSAAAQKTIHGFLGAEGDTLLAAV 386 Query: 1451 QAEYYRAMLTKNYQVLRNTGKGGA-----------------HQSLLNIVMQLRK--VCNH 1573 A A ++L G G HQ L ++ + V H Sbjct: 387 NAGDDEAKARLIRELLDRHGTGRVLFRNTRAAVQGFPERKLHQYPLPCPVEYLELPVGEH 446 Query: 1574 PYLIPGTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILED 1753 L P +S S E + ++ L LK+L +VL+ + LED Sbjct: 447 ADLYPEVSFQSQSDASEEERWWRFDPRVEWLIDTLKMLKR--VKVLVICAHAETAMDLED 504 Query: 1754 YLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVII 1933 L + G A +G +++ ER A F ++ L+ + G N + +++ Sbjct: 505 ALRVRSGIPATVFHEG-MNILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFSHHLVL 563 Query: 1934 YDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 2062 +D +P Q + R RIGQ + + ++ + S + R+ Q Sbjct: 564 FDLPSHPDLLEQRIGRLDRIGQKHVIELHVPFLETSPQARLFQ 606
>Q9M1I1:FB304_ARATH F-box protein At3g54455/At3g54460 - Arabidopsis thaliana (Mouse-ear| cress) Length = 1378 Score = 48.9 bits (115), Expect = 1e-04 Identities = 34/131 (25%), Positives = 66/131 (50%) Frame = +2 Query: 1703 RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLST 1882 +VLIFSQ + + ++E LT G K F ++ + + A+ F D L+ Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTA-GIK-FGKMYSPMQSYNKMKALAMFQNDADCMALLMDG 1252 Query: 1883 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 2062 S LG++L+ V + + ++ + Q ++RAHR+G + V L +R ++EE++++ Sbjct: 1253 -SGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMR 1311 Query: 2063 LAKKKLMLDQL 2095 + D+L Sbjct: 1312 FLEDAEKSDRL 1322
>Q7N8V1:RAPA_PHOLL RNA polymerase-associated protein rapA - Photorhabdus luminescens| subsp. laumondii Length = 970 Score = 48.5 bits (114), Expect = 1e-04 Identities = 101/484 (20%), Positives = 174/484 (35%), Gaps = 46/484 (9%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL N + K + + V+LADE+GLGKT+ A + + LV+VP S Sbjct: 154 LIPHQLHIANEVGKRY--APRVLLADEVGLGKTIEAGMIIHQQLLAGRAE-RVLVIVPDS 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +R++ + H + T Sbjct: 211 LQHQWLVEM---------------------LRRFNLRFALFDDSRYIEARHDSDNPFETE 249 Query: 1064 EMVLVDATYLR----------SVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR----- 1198 ++VL + R W++++VDE H Sbjct: 250 QLVLCSLDFARRNKQRFEHMLEASWDLMVVDEAHHLVWSEDAPSREYQVVEQLAEQIPSV 309 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF---EEKFNELATA------------EK 1333 +LLT TP Q + L L P F +F ++K+ +A A + Sbjct: 310 LLLTATPEQLGQESHFARLRLLDPNRFHDYQTFIDEQQKYRPVADAVTLLLSGEQLNNNQ 369 Query: 1334 VEELKKLVAPHMLRRLKKDAMKNI-PPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG 1510 + + +L++ + L K A N +T R + + + R + ++ RN Sbjct: 370 LNLMGELISEQNIEPLLKAANSNSGESETARRELISMLMDRHGTSRIL----FRNTRNGV 425 Query: 1511 KGGAHQSLLNIVMQLR-------KVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLAL-- 1663 KG H+ L I + L KV + E + + ++ + + A Sbjct: 426 KGFPHRELHQIKLPLPSQYQTAIKVSDIMGAKKSLEARAWDMLYPEQIYQEFEGENATWW 485 Query: 1664 -----LHSMLKVLHSDGH-RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQ 1825 + +L L ++ H +VL+ LE L G + +G +S+ ER Sbjct: 486 NFDPRVEWLLGFLMANRHEKVLVICAKATTALQLEQVLREREGIRGAVFHEG-LSLIERD 544 Query: 1826 AAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSN 2005 A F ++ LL + G N A+ ++++D FNP Q + R RIGQS Sbjct: 545 RAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQSR 604 Query: 2006 RLLV 2017 + + Sbjct: 605 DIQI 608
>Q9CK01:RAPA_PASMU RNA polymerase-associated protein rapA - Pasteurella multocida| Length = 967 Score = 48.5 bits (114), Expect = 1e-04 Identities = 97/471 (20%), Positives = 171/471 (36%), Gaps = 32/471 (6%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + V+LADE+GLGKT+ A L K+ L++VP + Sbjct: 153 LIPHQLHIAREVGQR--TAPRVLLADEVGLGKTIEAGMILQQQLFAEKVE-RVLIIVPET 209 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E L H + +E A I + L Sbjct: 210 LQHQWLVEM------LRRFNLHFALFDEERCADFE-DPASALWINPFNTESQIICALDWL 262 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 L +++LIVDE H R +LLT TP Q Sbjct: 263 CEKPKRVEQLLEAGFDMLIVDEAHHLGWSEHNPSLEYQLVEQLARQIPAVLLLTATPEQL 322 Query: 1229 NIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHMLRRLKKDAMKNIP 1408 + L+ L P F +F ++ + E ++ L+A L ++K+ + ++ Sbjct: 323 GQESHFARLSLLDPDRFYDYQAFVQEQQQYQPV--AEAVQSLLADKPLSAVEKNHISDLL 380 Query: 1409 PKTERMVPVELTSIQAEYYRAMLTKNYQV-------------LRNTG---KGGAHQSLLN 1540 + + +++ QA + L + + RNT KG H++ Sbjct: 381 SEQDVEPLLKVLDSQAHDEQKALARQELIDNLIDRHGTSRVLFRNTRQGVKGFPHRTYNQ 440 Query: 1541 IVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRI-----------KASAKLALLHSMLKVL 1687 I ++L K N+ + E G + + ++ + +L L + LK Sbjct: 441 ITLELPKQYNNAANVLAMLGEKGDNDSFYPEQMFQKLNPDARWWEFDPRLEWLITFLK-- 498 Query: 1688 HSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFV 1867 + +VL+ + LE L + +A +S+ ER A F Q + Sbjct: 499 NHREEKVLVICRHANTAIQLEQALREKEAIRA-AVFHEKLSIVERDRAAAYFAQQEDGAQ 557 Query: 1868 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 LLS+ G N A +++++ +P Q + R RIGQ + ++ Sbjct: 558 LLLSSSIGSEGRNFQFASHLVLFNLPDDPDLLEQCIGRLDRIGQRRDIQIH 608
>Q7UDT5:RAPA_SHIFL RNA polymerase-associated protein rapA - Shigella flexneri| Length = 968 Score = 47.8 bits (112), Expect = 2e-04 Identities = 103/473 (21%), Positives = 169/473 (35%), Gaps = 34/473 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A L L++VP + Sbjct: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +L + A + Y + + I + + L Sbjct: 211 LQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE-- 267 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 +L W++L+VDE H +LLT TP Q Sbjct: 268 --------HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 Query: 1229 NIGEMYNLLNFLQPASFPSLASF-EEKFNELATAEKVEEL---KKLVAPHMLRRLKKDAM 1396 + + L L P F A F EE+ N A+ V L KL + + Sbjct: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 Query: 1397 KNIPP--KTERMVPVELTSIQAEYYRAMLTKN------YQVLRNTGKGGAHQSLLNIVMQ 1552 ++I P + + S + E ++ ++ ++ RN KG + L I + Sbjct: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 Query: 1553 LRKVCNHPYLIPGT-----EPESGSPEFLHEMRI------------KASAKLALLHSMLK 1681 L + G E + + L+ RI ++ L L Sbjct: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 Query: 1682 VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR 1861 S V+ T L LE L G +A +G +S+ ER A F ++ T Sbjct: 500 SHRSQKVLVICAKAATALQ--LEQVLREREGIRAAVFHEG-MSIIERDRAAAWFAEEDTG 556 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 LL + G N A ++++D FNP Q + R RIGQ++ + ++ Sbjct: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609
>P60240:RAPA_ECOLI RNA polymerase-associated protein rapA - Escherichia coli| Length = 968 Score = 47.8 bits (112), Expect = 2e-04 Identities = 103/473 (21%), Positives = 169/473 (35%), Gaps = 34/473 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A L L++VP + Sbjct: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +L + A + Y + + I + + L Sbjct: 211 LQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE-- 267 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 +L W++L+VDE H +LLT TP Q Sbjct: 268 --------HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 Query: 1229 NIGEMYNLLNFLQPASFPSLASF-EEKFNELATAEKVEEL---KKLVAPHMLRRLKKDAM 1396 + + L L P F A F EE+ N A+ V L KL + + Sbjct: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 Query: 1397 KNIPP--KTERMVPVELTSIQAEYYRAMLTKN------YQVLRNTGKGGAHQSLLNIVMQ 1552 ++I P + + S + E ++ ++ ++ RN KG + L I + Sbjct: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 Query: 1553 LRKVCNHPYLIPGT-----EPESGSPEFLHEMRI------------KASAKLALLHSMLK 1681 L + G E + + L+ RI ++ L L Sbjct: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 Query: 1682 VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR 1861 S V+ T L LE L G +A +G +S+ ER A F ++ T Sbjct: 500 SHRSQKVLVICAKAATALQ--LEQVLREREGIRAAVFHEG-MSIIERDRAAAWFAEEDTG 556 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 LL + G N A ++++D FNP Q + R RIGQ++ + ++ Sbjct: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609
>Q8FL92:RAPA_ECOL6 RNA polymerase-associated protein rapA - Escherichia coli O6| Length = 968 Score = 47.8 bits (112), Expect = 2e-04 Identities = 103/473 (21%), Positives = 169/473 (35%), Gaps = 34/473 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A L L++VP + Sbjct: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +L + A + Y + + I + + L Sbjct: 211 LQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE-- 267 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 +L W++L+VDE H +LLT TP Q Sbjct: 268 --------HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 Query: 1229 NIGEMYNLLNFLQPASFPSLASF-EEKFNELATAEKVEEL---KKLVAPHMLRRLKKDAM 1396 + + L L P F A F EE+ N A+ V L KL + + Sbjct: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 Query: 1397 KNIPP--KTERMVPVELTSIQAEYYRAMLTKN------YQVLRNTGKGGAHQSLLNIVMQ 1552 ++I P + + S + E ++ ++ ++ RN KG + L I + Sbjct: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 Query: 1553 LRKVCNHPYLIPGT-----EPESGSPEFLHEMRI------------KASAKLALLHSMLK 1681 L + G E + + L+ RI ++ L L Sbjct: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 Query: 1682 VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR 1861 S V+ T L LE L G +A +G +S+ ER A F ++ T Sbjct: 500 SHRSQKVLVICAKAATALQ--LEQVLREREGIRAAVFHEG-MSIIERDRAAAWFAEEDTG 556 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 LL + G N A ++++D FNP Q + R RIGQ++ + ++ Sbjct: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609
>P60241:RAPA_ECO57 RNA polymerase-associated protein rapA - Escherichia coli O157:H7| Length = 968 Score = 47.8 bits (112), Expect = 2e-04 Identities = 103/473 (21%), Positives = 169/473 (35%), Gaps = 34/473 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A L L++VP + Sbjct: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +L + A + Y + + I + + L Sbjct: 211 LQHQWLVEMLRRF-NLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLE-- 267 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 +L W++L+VDE H +LLT TP Q Sbjct: 268 --------HLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQL 319 Query: 1229 NIGEMYNLLNFLQPASFPSLASF-EEKFNELATAEKVEEL---KKLVAPHMLRRLKKDAM 1396 + + L L P F A F EE+ N A+ V L KL + + Sbjct: 320 GMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGE 379 Query: 1397 KNIPP--KTERMVPVELTSIQAEYYRAMLTKN------YQVLRNTGKGGAHQSLLNIVMQ 1552 ++I P + + S + E ++ ++ ++ RN KG + L I + Sbjct: 380 QDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLP 439 Query: 1553 LRKVCNHPYLIPGT-----EPESGSPEFLHEMRI------------KASAKLALLHSMLK 1681 L + G E + + L+ RI ++ L L Sbjct: 440 LPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLT 499 Query: 1682 VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTR 1861 S V+ T L LE L G +A +G +S+ ER A F ++ T Sbjct: 500 SHRSQKVLVICAKAATALQ--LEQVLREREGIRAAVFHEG-MSIIERDRAAAWFAEEDTG 556 Query: 1862 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 LL + G N A ++++D FNP Q + R RIGQ++ + ++ Sbjct: 557 AQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609
>Q8ZRV8:RAPA_SALTY RNA polymerase-associated protein rapA - Salmonella typhimurium| Length = 968 Score = 47.0 bits (110), Expect = 4e-04 Identities = 103/474 (21%), Positives = 170/474 (35%), Gaps = 35/474 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A L L++VP + Sbjct: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +L + + Y E + I + + L Sbjct: 211 LQHQWLVEMLRRF-NLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLE-- 267 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 +L W++L+VDE H +LLT TP Q Sbjct: 268 --------HLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQL 319 Query: 1229 NIGEMYNLLNFLQPASFPSLASF-EEKFNELATAEKVEEL---KKLVAPHMLRRLKKDAM 1396 + + L L P F F EE+ N A+ V L KL + R Sbjct: 320 GMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGE 379 Query: 1397 KNIPPKTE---------RMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNIVM 1549 ++I P + + EL S+ + + ++ RN KG + L + + Sbjct: 380 QDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVL-FRNTRNGVKGFPKRELHTVKL 438 Query: 1550 QLRKVCNHPYLIPGT-----EPESGSPEFLHEMRI------------KASAKLALLHSML 1678 L + G PE + + L+ +I ++ L L Sbjct: 439 PLPTQYQTAIKVSGIMGARKSPEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYL 498 Query: 1679 KVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKT 1858 H ++I ++ T L LE L G +A +G +S+ ER A F ++ T Sbjct: 499 -TSHRSQKVLVICAKATTALQ-LEQVLREREGIRAAVFHEG-MSIIERDRAAAWFAEEDT 555 Query: 1859 RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 LL + G N A ++++D FNP Q + R RIGQ++ + ++ Sbjct: 556 GAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609
>Q8DCG1:RAPA_VIBVU RNA polymerase-associated protein rapA - Vibrio vulnificus| Length = 969 Score = 46.6 bits (109), Expect = 5e-04 Identities = 96/487 (19%), Positives = 178/487 (36%), Gaps = 38/487 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A + + L++VP + Sbjct: 154 LIPHQLYIAHEVGRR--HAPRVLLADEVGLGKTIEAGMIIHQQVLLGRAER-ILIVVPET 210 Query: 884 TMPNWMAEFAS-WAPHLNVVEYHGSARA-RSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 W+ E + H ++ + A + ++ + + +KS K Sbjct: 211 LQHQWLVEMMRRFNLHFSIFDEERCVEAFAESDNPFDTQQYVLCSLDFLRKSRK------ 264 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPL 1222 +E L W++L+VDE H +LLT TP Sbjct: 265 RFEQAL-------EAEWDLLVVDEAHHLEWSQDKPSRGYQVVEGLAERTPGVLLLTATPE 317 Query: 1223 QNNIGEMYNLLNFLQPASFPSLASFEEKFNELATA---------------EKVEELKKLV 1357 Q + L L F A+F E+ + A E ++ +L+ Sbjct: 318 QLGRESHFARLRLLDSDRFYDYAAFVEEEAQYAPVADAITALFSGVKLADEAKNQITELL 377 Query: 1358 APHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RAMLTKNYQVLRNTGKGGAHQ 1528 + + L + N +++ + EL + + R + ++ H Sbjct: 378 SEQDVEPLFRIIESNADEESKAIARQELIDNLMDRHGTGRVLFRNTRAAIKGFPVRNVHL 437 Query: 1529 SLLNIVMQLRKVCNHPYLIPGT-EPESGSPEFLHEMRI------------KASAKLALLH 1669 + I Q +I G PE+ + + L+ I + ++ L Sbjct: 438 LPMPIPTQYTTSMRVSGMIGGKLAPEARAMKNLYPEEIFQEFEGEESSWWQFDCRVNWLL 497 Query: 1670 SMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ 1849 LK S+ +VL+ + LE L G +A +G +S+ ER A F Q Sbjct: 498 EKLKAQRSE--KVLVIASRASTALQLEQALREREGIRATVFHEG-MSILERDKAAAYFAQ 554 Query: 1850 DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLV 2029 ++ L+ + G N A+ ++++D FNP Q + R RIGQ + ++ Sbjct: 555 EEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDIHVPY 614 Query: 2030 VRASVEE 2050 ++ + +E Sbjct: 615 LQGTAQE 621
>Q7MHE6:RAPA_VIBVY RNA polymerase-associated protein rapA - Vibrio vulnificus (strain| YJ016) Length = 969 Score = 46.2 bits (108), Expect = 6e-04 Identities = 96/487 (19%), Positives = 178/487 (36%), Gaps = 38/487 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A + + L++VP + Sbjct: 154 LIPHQLYIAHEVGRR--HAPRVLLADEVGLGKTIEAGMIIHQQVLLGRAER-ILIVVPET 210 Query: 884 TMPNWMAEFAS-WAPHLNVVEYHGSARA-RSAIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 W+ E + H ++ + A + ++ + + +KS K Sbjct: 211 LQHQWLVEMMRRFNLHFSIFDEERCIEAFAESDNPFDTQQYVLCSLDFLRKSRK------ 264 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPL 1222 +E L W++L+VDE H +LLT TP Sbjct: 265 RFEQAL-------EADWDLLVVDEAHHLEWSQDKPSRGYQVVEGLAERTPGVLLLTATPE 317 Query: 1223 QNNIGEMYNLLNFLQPASFPSLASFEEKFNELATA---------------EKVEELKKLV 1357 Q + L L F A+F E+ + A E ++ +L+ Sbjct: 318 QLGRESHFARLRLLDSDRFYDYAAFVEEEAQYAPVADAITALFSGVKLADEAKNQITELL 377 Query: 1358 APHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYY---RAMLTKNYQVLRNTGKGGAHQ 1528 + + L + N +++ + EL + + R + ++ H Sbjct: 378 SEQDVEPLFRIIESNADEESKAIARQELIDNLMDRHGTGRVLFRNTRAAIKGFPVRNVHL 437 Query: 1529 SLLNIVMQLRKVCNHPYLIPGT-EPESGSPEFLHEMRI------------KASAKLALLH 1669 + I Q +I G PE+ + + L+ I + ++ L Sbjct: 438 LPMPIPTQYTTSMRVSGMIGGKLAPEARAMKNLYPEEIFQEFEGEESSWWQFDCRVNWLL 497 Query: 1670 SMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQ 1849 LK S+ +VL+ + LE L G +A +G +S+ ER A F Q Sbjct: 498 EKLKAQRSE--KVLVIASRASTALQLEQALREREGIRATVFHEG-MSILERDKAAAYFAQ 554 Query: 1850 DKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLV 2029 ++ L+ + G N A+ ++++D FNP Q + R RIGQ + ++ Sbjct: 555 EEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDIHVPY 614 Query: 2030 VRASVEE 2050 ++ + +E Sbjct: 615 LQGTAQE 621
>A1D6X9:DBP8_NEOFI ATP-dependent RNA helicase dbp8 - Neosartorya fischeri (strain ATCC| 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 526 Score = 46.2 bits (108), Expect = 6e-04 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 11/166 (6%) Frame = +2 Query: 1592 TEPESGSPEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL 1765 TE + P L + +++ + + A LH +L + +IF TK D+LE L Sbjct: 314 TENQGSIPPTLKQTYLKVPLTHREAFLHVLLSTEDNASRPAIIFCNHTKTADLLERMLR- 372 Query: 1766 EFGPKAFERVDGSVSV---AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 + RV S+ +ER A + RF R L++T G+++ T VI Y Sbjct: 373 ----RLTHRVTSLHSLLPQSERNANLARFRASAAR--ILVATDVASRGLDIPTVSLVINY 426 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLV------YRLVVRASVEERI 2056 D NP + + R R G+S + +LV+ ++EER+ Sbjct: 427 DVPRNPDDYVHRVGRTARAGRSGEAITLVGQRDVQLVL--AIEERV 470
>Q66EN4:RAPA_YERPS RNA polymerase-associated protein rapA - Yersinia pseudotuberculosis| Length = 968 Score = 45.4 bits (106), Expect = 0.001 Identities = 100/483 (20%), Positives = 167/483 (34%), Gaps = 45/483 (9%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + V+LADE+GLGKT+ A + + L++VP S Sbjct: 154 LIPHQLHIAYEVGQR--HAPRVLLADEVGLGKTIEAGMIIHQQLLAGRAER-VLIVVPES 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E R ++ + S+ F+ T Sbjct: 211 LQHQWLVEML-----------------RRFNLRFSLFDDSRYSEALLDSSNPFD----TE 249 Query: 1064 EMVLVDATYLR----------SVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR----- 1198 +MV+ ++R W++L+VDE H Sbjct: 250 QMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIEQLAEHIPGV 309 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF---EEKFNELATA------------EK 1333 +LLT TP Q + L L P F F ++K+ +A A +K Sbjct: 310 LLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLLGGERLTDDK 369 Query: 1334 VEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGK 1513 + L +L+ + L K A N + EL ++ + + ++ RN K Sbjct: 370 LNLLGELIDEQDIEPLLKAA--NSQSEDSEAARQELVTMLMDRHGTSRVL-FRNTRNGVK 426 Query: 1514 GGAHQSLLNIVMQLRKVCNHPYLIPGTE---------------PESGSPEFLHEMRIKAS 1648 G H+ L I + L + G PE EF E + Sbjct: 427 GFPHRVLHQIKLPLPTQYQTAIKVSGIMGAKKTLDARAKDMLYPEQIYQEFEGENATWWN 486 Query: 1649 AKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQA 1828 + + ++ + G +VL+ LE L +A +G +S+ ER Sbjct: 487 FDPRVEWLLNYLVANRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEG-LSLIERDR 545 Query: 1829 AITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 2008 A F ++ LL + G N A ++++D FNP Q + R RIGQ+ Sbjct: 546 AAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRIGQNRE 605 Query: 2009 LLV 2017 + + Sbjct: 606 IQI 608
>Q8ZII0:RAPA_YERPE RNA polymerase-associated protein rapA - Yersinia pestis| Length = 968 Score = 45.4 bits (106), Expect = 0.001 Identities = 100/483 (20%), Positives = 167/483 (34%), Gaps = 45/483 (9%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + V+LADE+GLGKT+ A + + L++VP S Sbjct: 154 LIPHQLHIAYEVGQR--HAPRVLLADEVGLGKTIEAGMIIHQQLLAGRAER-VLIVVPES 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E R ++ + S+ F+ T Sbjct: 211 LQHQWLVEML-----------------RRFNLRFSLFDDSRYSEALLDSSNPFD----TE 249 Query: 1064 EMVLVDATYLR----------SVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR----- 1198 +MV+ ++R W++L+VDE H Sbjct: 250 QMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHMAWSEEAPSREYQVIEQLAEHIPGV 309 Query: 1199 VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF---EEKFNELATA------------EK 1333 +LLT TP Q + L L P F F ++K+ +A A +K Sbjct: 310 LLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLLGGERLTDDK 369 Query: 1334 VEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGK 1513 + L +L+ + L K A N + EL ++ + + ++ RN K Sbjct: 370 LNLLGELIDEQDIEPLLKAA--NSQSEDSEAARQELVTMLMDRHGTSRVL-FRNTRNGVK 426 Query: 1514 GGAHQSLLNIVMQLRKVCNHPYLIPGTE---------------PESGSPEFLHEMRIKAS 1648 G H+ L I + L + G PE EF E + Sbjct: 427 GFPHRVLHQIKLPLPTQYQTAIKVSGIMGAKKTLDARAKDMLYPEQIYQEFEGENATWWN 486 Query: 1649 AKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQA 1828 + + ++ + G +VL+ LE L +A +G +S+ ER Sbjct: 487 FDPRVEWLLNYLVANRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEG-LSLIERDR 545 Query: 1829 AITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 2008 A F ++ LL + G N A ++++D FNP Q + R RIGQ+ Sbjct: 546 AAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRIGQNRE 605 Query: 2009 LLV 2017 + + Sbjct: 606 IQI 608
>Q6LV34:RAPA_PHOPR RNA polymerase-associated protein rapA - Photobacterium profundum| (Photobacterium sp. (strain SS9)) Length = 972 Score = 45.4 bits (106), Expect = 0.001 Identities = 99/480 (20%), Positives = 177/480 (36%), Gaps = 41/480 (8%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + + V+LADE+GLGKT+ A + + L++VP + Sbjct: 154 LIPHQLFIAHEVGRRY--APRVLLADEVGLGKTIEAGMIIHQQVLAGRAER-ILIVVPET 210 Query: 884 TMPNWMAEFAS-WAPHLNVVEYHGSARARS-AIRQYEWHEGDATQIGKSKKSHKFNVLLT 1057 W+ E + H ++ + + + A +E + + +KS + Sbjct: 211 LQHQWLVEMMRRFNLHFSIFDEERCVESLADATNPFETAQYVLCSLDFLRKSRR------ 264 Query: 1058 TYEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPL 1222 +E + W++L+VDE H +LLT TP Sbjct: 265 RFEQA-------QDADWDLLVVDEAHHLEWSEDKPSRQYQVVEALAEATPGVLLLTATPE 317 Query: 1223 QNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPHML----RRLKKD 1390 Q + L L P F +F E+ + A E + +L++ + R+ D Sbjct: 318 QLGRESHFARLRLLDPDRFYDYDTFVEEERQYAPV--AEAVTRLLSGEKIDDNARKTLVD 375 Query: 1391 AM--KNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTG-----------KGGAHQS 1531 + ++I PK + + A+ R L + TG KG + Sbjct: 376 LLSEQDIEPKLRLIESSDADDEHAQTVRHELIDSLMDRHGTGRVLFRNTRAAIKGFPERH 435 Query: 1532 L----LNIVMQLRKVCNHPYLIPGT-----------EPESGSPEFLHEMRI--KASAKLA 1660 L L + Q + ++ G+ PE EF E ++ Sbjct: 436 LNMYPLELPSQYKTAMRVSSMMSGSISAEQKAIKLLYPEDIYQEFEGESATWWNFDPRVN 495 Query: 1661 LLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITR 1840 L MLK ++ +VL+ + LE L G +A +G +S+ +R A Sbjct: 496 WLLEMLKANRNE--KVLVICSRAQTALTLEQALREREGIRATVFHEG-MSIIDRDKAAAY 552 Query: 1841 FNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 F Q+ LL + G N ++ ++++D NP Q + R RIGQ + ++ Sbjct: 553 FAQEDDGAQVLLCSEIGSEGRNFQFSNQLVMFDLPNNPDLLEQRIGRLDRIGQQRDIEIH 612
>P44781:RAPA_HAEIN RNA polymerase-associated protein rapA - Haemophilus influenzae| Length = 923 Score = 45.1 bits (105), Expect = 0.001 Identities = 99/473 (20%), Positives = 170/473 (35%), Gaps = 22/473 (4%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + V+LADE+GLGKT+ A L + K+ L++VP + Sbjct: 152 LIPHQLHIAAEVGNR--VNPRVLLADEVGLGKTIEAGMILQNQLFAEKVQ-RVLIIVPET 208 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNV----L 1051 W+ E +R++ H + ++ + F++ Sbjct: 209 LQHQWLVEM---------------------LRRFNLH----FALFDEERCNDFDLDAVNP 243 Query: 1052 LTTYEMVLVDATYLRSVP----------WEVLIVDEGHRXXXXXXXXXXXXXXXXXQHRV 1201 TT +++ +L + P ++ LIVDE H R+ Sbjct: 244 FTTESLIICSLNWLETHPNRVELVLNAQFDCLIVDEAHHLVWSETSPSTAYLLVEQLARI 303 Query: 1202 -----LLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNELATAEKVEELKKLVAPH 1366 LLT TP Q + L L P F +F ++ V ++ L+A Sbjct: 304 IPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPV--VNAVESLLANK 361 Query: 1367 MLRRLKKDAMKN--IPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLN 1540 L ++K+ + + + E + ++ E RA ++ G G + L Sbjct: 362 ALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQELIQALIDRHGTG---RMLFR 418 Query: 1541 IVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRI-KASAKLALLHSMLKVLHSDGHRVLIF 1717 Q K H H++ + + + K+ L LK LH + ++ + Sbjct: 419 NTRQGVKGFPH--------------RVYHQITLSEENDKIDWLIDFLK-LHRN-EKIFVI 462 Query: 1718 SQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGL 1897 Q LE L +A +S+ ER A F + LLS+ Sbjct: 463 CQTAATAIQLEQILREREAIRA-AVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSE 521 Query: 1898 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERI 2056 G N A ++++D NP Q + R RIGQ + VY + S + R+ Sbjct: 522 GRNFQFAANLVLFDLPTNPDLLEQCIGRLDRIGQKRDVQVYVPCAKDSPQSRL 574
>Q6D0E6:RAPA_ERWCT RNA polymerase-associated protein rapA - Erwinia carotovora subsp.| atroseptica (Pectobacterium atrosepticum) Length = 967 Score = 45.1 bits (105), Expect = 0.001 Identities = 118/565 (20%), Positives = 212/565 (37%), Gaps = 46/565 (8%) Frame = +2 Query: 461 RVSLDEV--EEALIKWYGLPYDECTWERLDEPIM-LKYVHLVTQFKNFECQALDRDVRGN 631 ++ +D+V E+ L+ + G D+ T L E + K Q + F Q +DR R Sbjct: 68 QLKIDDVREEKGLLVYCGQRLDDETPAELREVFLDSKLTFNKPQDRLFAGQ-IDRMDRFA 126 Query: 632 CANARNRQELTVLIQQPKELKG--GMLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTV 805 + + +QQ L+G L PHQL + + + V+LADE+GLGKT+ Sbjct: 127 LRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAYEVGQR--HAPRVLLADEVGLGKTI 184 Query: 806 SACAFLSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVV------EYHGSARAR 967 A + + + L++VP + W+ E N++ E + A+ Sbjct: 185 EAGMIIHQQLLAGRASR-VLIVVPETLQHQWLVEMLR---RFNLLFSLFDDERYAEAKLD 240 Query: 968 SAIRQYEWHEGDATQIGKSKKS-HKFNVLLTTYEMVLVDATYLRSVPWEVLIVDEGHRXX 1144 S+ +E + +G ++S +F L+ T W++L+VDE H Sbjct: 241 SS-NPFETEQLVICSLGFVQRSAQRFAQLVNT--------------DWDLLVVDEAHHLV 285 Query: 1145 XXXXXXXXXXXXXXXQHR-----VLLTGTPLQNNIGEMYNLLNFLQPASFPSLASF---E 1300 R +LLT TP Q + L L P F F + Sbjct: 286 WSEESPSPEYQAIEALARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQ 345 Query: 1301 EKFN------------ELATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELT 1444 +++ E A A ++ L L+ + L K N + EL Sbjct: 346 QQYRPVADAVTLLLAGEKAQAAELNVLSDLLGEQDIEPLLKSI--NSDSDDNQKARQELI 403 Query: 1445 SIQAEYY---RAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEP-ESGS 1612 ++ + + R + Q ++ + HQ L + Q + ++ +P E+ + Sbjct: 404 TMLMDRHGTSRVLFRNTRQGVKGFPQRVLHQIRLPLPAQYQTAIKVSGIMNANKPLETRA 463 Query: 1613 PEFLHEMRIKASAKL---------ALLHSMLKVLHSD-GHRVLIFSQMTKLLDILEDYLT 1762 + L+ +I + + +L L ++ +VL+ LE L Sbjct: 464 RDMLYPEQIYQQLEGDDATWWNFDPRVEWLLNYLTTNRDEKVLVICAQAATALQLEQVLR 523 Query: 1763 LEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDS 1942 +A +G +S+ ER A F ++ L+ + G N A ++++D Sbjct: 524 TREAIRAAVFHEG-LSILERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDL 582 Query: 1943 DFNPHADIQAMNRAHRIGQSNRLLV 2017 FNP Q + R RIGQ+ + V Sbjct: 583 PFNPDLLEQRIGRLDRIGQAKEIQV 607
>Q0CF43:DBP7_ASPTN ATP-dependent RNA helicase dbp7 - Aspergillus terreus (strain NIH| 2624) Length = 769 Score = 44.7 bits (104), Expect = 0.002 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 1/152 (0%) Frame = +2 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 P R+ GS+ R + + F ++K V L+ T G++L D VI YD F+ Sbjct: 502 PVTLHRLHGSLPQHVRTSTLASFARNKDASV-LVCTDVASRGLDLPNVDLVIEYDPAFSA 560 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 + + R R+G+ R L++ ++ EE +++ K+ K+ ++ +D Sbjct: 561 EDHLHRIGRTARLGRDGRALIF---LQPGCEEGYVEILKRGYRDG----GKALTRTNADD 613 Query: 2135 IIRWGTEELFRNNDEVNGKD-NDEASDAKHDV 2227 I++ G F N E KD ++A+D + D+ Sbjct: 614 ILKRG----FGGNVESENKDWEEKATDWQMDL 641
>Q5UP58:YR592_MIMIV Putative helicase R592 - Mimivirus| Length = 841 Score = 43.9 bits (102), Expect = 0.003 Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 19/250 (7%) Frame = +2 Query: 1589 GTEPESGSPEFLHEMRIKASAKLALLHSMLKVL--HSDGHRVLIFSQMTKLLDILEDYLT 1762 GT + E + + + K +L +L + + + ++LIFS DY Sbjct: 507 GTSNKKKKSEIVGKYKFNEMDKADVLEQVLSYISKNDENPKILIFS----------DY-- 554 Query: 1763 LEFGPKAFERVDGSVSVAERQAA------------ITRFNQDKTRFVFLLSTRSCGLGIN 1906 + FE++ +++ A Q A IT F T + +L++++ G G+N Sbjct: 555 ----SQTFEKITKNIAKANLQYAYLSGTPAHITNLITEFENGITN-ILMLNSQNFGSGLN 609 Query: 1907 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLML 2086 L +A+ +I+Y P + Q + RA R G+ N L V +V E R +L K + + Sbjct: 610 LQSANYLILYHR-MLPELETQVIGRAQRFGRKNNLRVIFMV--NDNENRDCRLDSKPINI 666 Query: 2087 DQ-----LFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIEVKHR 2251 + N ++ +E ++ G++E + + D + K + + K Sbjct: 667 LSDSELWMITNPTDLNEEPDEESDEGSDEDVEKSKDKKSSDKKSSDKKKSEKKSSDKKSS 726 Query: 2252 RKTGGLGDVY 2281 K Y Sbjct: 727 NKKNSKKKTY 736
>Q0CNX1:DBP8_ASPTN ATP-dependent RNA helicase dbp8 - Aspergillus terreus (strain NIH| 2624) Length = 527 Score = 43.9 bits (102), Expect = 0.003 Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 7/229 (3%) Frame = +2 Query: 1334 VEELKKLVAPHMLRRLK--KDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNT 1507 ++E +L+AP L + + +PP +ER Q + A +T + L++ Sbjct: 238 LDEADRLLAPGPGSMLPDVETCLSALPPSSER---------QTLLFTATVTPEVRALKSM 288 Query: 1508 GKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHE--MRIKASAKLALLHSMLK 1681 + + V ++ G P+S P L + +++ + + A LH +L Sbjct: 289 PRASTKPPVF--VTEIEAGGTTSAGADGAAPKSTLPPTLKQTYLKVPMTHREAFLHVLLS 346 Query: 1682 VLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSV---AERQAAITRFNQD 1852 + G +IF TK D+LE L + RV S+ +ER + + RF Sbjct: 347 TDGNAGKPAIIFCNHTKTADLLERLLR-----RLAHRVTSLHSLLPQSERSSNLARFRAS 401 Query: 1853 KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 R L++T G+++ + V+ YD NP + + R R G+ Sbjct: 402 AAR--ILVATDVASRGLDIPSVALVVNYDVPRNPDDYVHRVGRTARAGR 448
>A1CKJ0:DBP8_ASPCL ATP-dependent RNA helicase dbp8 - Aspergillus clavatus| Length = 523 Score = 43.1 bits (100), Expect = 0.006 Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 11/214 (5%) Frame = +2 Query: 1589 GTEPESGSPEFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLE 1768 GT P + +L ++ + + A LH +L + +IF TK D+LE L Sbjct: 315 GTVPPTLKQTYL---KVPLTHREAFLHVLLSTEGNSTKPAIIFCNHTKTADLLERMLR-- 369 Query: 1769 FGPKAFERVDGSVSV---AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYD 1939 + RV S+ +ER A + RF R L++T G+++ + V+ YD Sbjct: 370 ---RLSHRVTSLHSLLPQSERNANLARFRASAAR--ILVATDVASRGLDIPSVSLVVNYD 424 Query: 1940 SDFNPHADIQAMNRAHRIGQS--------NRLLVYRLVVRASVEERILQLAKKKLMLDQL 2095 NP + + R R G+S R + L + A V ++ + +++ + ++ Sbjct: 425 VPRNPDDYVHRVGRTARAGRSGESVTLVGQRDVQLVLAIEARVGRQMEEWSEEGVSIEGR 484 Query: 2096 FVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDN 2197 V ++ KEV + R + E+ D + K N Sbjct: 485 VV-RTGVLKEVGEAKREASGEIDEGRDVLGRKRN 517
>Q8Z9J4:RAPA_SALTI RNA polymerase-associated protein rapA - Salmonella typhi| Length = 968 Score = 42.4 bits (98), Expect = 0.009 Identities = 98/476 (20%), Positives = 169/476 (35%), Gaps = 37/476 (7%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS 883 L PHQL + + + + V+LADE+GLGKT+ A L L++VP + Sbjct: 154 LIPHQLNIAHDVGRR--HAPRVLLADEVGLGKTIEAGMILHQQLLSGAAER-VLIIVPET 210 Query: 884 TMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTTY 1063 W+ E +L + + Y E + I + + L Sbjct: 211 LQHQWLVEMLRRF-NLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLE-- 267 Query: 1064 EMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-----VLLTGTPLQN 1228 +L W++L+VDE H +LLT TP Q Sbjct: 268 --------HLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQL 319 Query: 1229 NIGEMYNLLNFLQPASFPSLASF---EEKFNELATA------------EKVEELKKLVAP 1363 + + L L P F F ++ + +A A +++ L L+ Sbjct: 320 GMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGE 379 Query: 1364 HMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLNI 1543 + L + A N + EL S+ + + ++ RN KG + L + Sbjct: 380 QDIEPLLQAA--NSDRDDAQAARDELVSMLMDRHGTSRVL-FRNTRNGVKGFPKRELHTV 436 Query: 1544 VMQLRKVCNHPYLIPGT-----EPESGSPEFLHEMRI------------KASAKLALLHS 1672 + L + G E + + L+ +I ++ L Sbjct: 437 KLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMG 496 Query: 1673 MLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQD 1852 L H ++I ++ T L LE L G +A +G +S+ ER A F ++ Sbjct: 497 YL-TSHRSQKVLVICAKATTALQ-LEQVLREREGIRAAVFHEG-MSIIERDRAAAWFAEE 553 Query: 1853 KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 T LL + G N A ++++D FNP Q + R RIGQ++ + ++ Sbjct: 554 DTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIH 609
>Q2UKX3:DBP8_ASPOR ATP-dependent RNA helicase dbp8 - Aspergillus oryzae| Length = 443 Score = 42.4 bits (98), Expect = 0.009 Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 13/215 (6%) Frame = +2 Query: 1592 TEPESGSPEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL 1765 TE P L + +++ + + A LH +L + +IF TK D+LE L Sbjct: 231 TENNGAIPPTLKQTYLKVPMTHREAFLHVLLSTERNSTKPAIIFCNHTKTADLLERMLR- 289 Query: 1766 EFGPKAFERVDGSVSV---AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 + RV S+ +ER + + RF R L++T G+++ + VI + Sbjct: 290 ----RLSHRVTSLHSLLPQSERNSNLARFRASAAR--ILVATDVASRGLDIPSVSLVINF 343 Query: 1937 DSDFNPHADIQAMNRAHRIGQ--------SNRLLVYRLVVRASVEERILQLAKKKLMLDQ 2092 D NP + + R R G+ R + L + VE R+ + +++ + ++ Sbjct: 344 DVPRNPDDYVHRVGRTARAGRHGEAVTLVGQRDVQLVLAIEERVERRMEEWSEEGVSIEG 403 Query: 2093 LFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDN 2197 V + KEV + R + E+ D + K N Sbjct: 404 RVV-RGGVLKEVGEAKREASGEIEEGRDVLGRKRN 437
>Q4WXW1:DBP8_ASPFU ATP-dependent RNA helicase dbp8 - Aspergillus fumigatus (Sartorya| fumigata) Length = 526 Score = 42.4 bits (98), Expect = 0.009 Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 13/215 (6%) Frame = +2 Query: 1592 TEPESGSPEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL 1765 TE + P L + +++ + + A LH +L + ++F TK D+LE L Sbjct: 314 TENQGTIPPTLKQTYLKVPLTHREAFLHVLLSTEGNASKPAIVFCNHTKTADLLERMLR- 372 Query: 1766 EFGPKAFERVDGSVSV---AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 + RV S+ +ER A + RF R L++T G+++ T VI Y Sbjct: 373 ----RLSHRVTSLHSLLPQSERNANLARFRASAAR--ILVATDVASRGLDIPTVSLVINY 426 Query: 1937 DSDFNPHADIQAMNRAHRIGQ--------SNRLLVYRLVVRASVEERILQLAKKKLMLDQ 2092 D NP + + R R G+ R + L + V ++ + +++ + ++ Sbjct: 427 DVPRNPDDYVHRVGRTARAGRRGEAVTLVGQRDVQLVLAIEERVGRQMEEWSEEGVSIEG 486 Query: 2093 LFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDN 2197 V ++ + KEV + R E+ D + K N Sbjct: 487 RLV-RTGALKEVGEAKREAMVEIDEGRDVLGRKRN 520
>A1CB55:DBP7_ASPCL ATP-dependent RNA helicase dbp7 - Aspergillus clavatus| Length = 755 Score = 42.0 bits (97), Expect = 0.012 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%) Frame = +2 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 P R+ GS+ R + + F +++ V L+ T G++L D V+ YD F+ Sbjct: 487 PVTLYRLHGSLPQNVRTSTLASFAKNREPSV-LICTDVASRGLDLPNVDLVVEYDPAFSA 545 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 + + R R+G+ R LV+ + EE +++ K+ K+ ++ + D Sbjct: 546 EDHLHRIGRTARVGRDGRALVF---LMPGCEENYVEILKRGYRDG----GKALTRVDAND 598 Query: 2135 IIRWGTEELFRNNDEVNGKDND-EASDAKHDV 2227 I++ G F N E KD D +A+D + +V Sbjct: 599 ILKRG----FGGNVEAGKKDWDVKATDWQCEV 626
>Q4P9P3:DRS1_USTMA ATP-dependent RNA helicase DRS1 - Ustilago maydis (Smut fungus)| Length = 932 Score = 41.6 bits (96), Expect = 0.016 Identities = 39/131 (29%), Positives = 62/131 (47%) Frame = +2 Query: 1703 RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLST 1882 + +IF + KL L+ L G A E + G +S +R A+T F KT F LL+T Sbjct: 613 QTMIFVRSKKLAHQLKIVFGL-LGLSAGE-LHGDLSQEQRIDALTDFRDGKTDF--LLAT 668 Query: 1883 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 2062 G+++ TVI YD A + + R R G++ R + + + R+L+ Sbjct: 669 DLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGR----AVTLVGEADRRMLK 724 Query: 2063 LAKKKLMLDQL 2095 LA KK +Q+ Sbjct: 725 LAIKKSSAEQI 735
>A1CNV8:DRS1_ASPCL ATP-dependent RNA helicase drs1 - Aspergillus clavatus| Length = 826 Score = 41.6 bits (96), Expect = 0.016 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 11/158 (6%) Frame = +2 Query: 1703 RVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLST 1882 RV++F + K + L G KA E + GS+S +R ++ F + K FLL+T Sbjct: 553 RVIVFFRQKKEAHRVRIVFGL-LGLKAAE-LHGSMSQEQRIKSVESFREGKV--AFLLAT 608 Query: 1883 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY-----RLVVRASVE 2047 G+++ +TVI Y++ + + + R R G+S R R VV+A+V Sbjct: 609 DLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAADPDRKVVKAAVR 668 Query: 2048 ERILQLAK------KKLMLDQLFVNKSESQKEVEDIIR 2143 Q AK + + DQ ++E+E++++ Sbjct: 669 AGKAQGAKIASRVVEPAVADQWAAKVEALEEEIEEVLK 706
>A1DE84:DBP7_NEOFI ATP-dependent RNA helicase dbp7 - Neosartorya fischeri (strain ATCC| 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 758 Score = 41.6 bits (96), Expect = 0.016 Identities = 34/140 (24%), Positives = 63/140 (45%) Frame = +2 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 P R+ GS+ R + + F ++K V L+ T G++L D V+ YD F+ Sbjct: 491 PVTLFRLHGSLPQNVRTSTLGAFAKNKEASV-LICTDVASRGLDLPNVDLVVEYDPAFSA 549 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 + + R R+G+ R L++ ++ EE +++ K+ K+ ++ + D Sbjct: 550 EDHLHRIGRTARVGRDGRALIF---LQPGCEENYVEVLKRGYRDG----GKALTRADAND 602 Query: 2135 IIRWGTEELFRNNDEVNGKD 2194 I++ G F N E KD Sbjct: 603 ILKRG----FGGNVESGNKD 618
>A2RA55:DBP7_ASPNG ATP-dependent RNA helicase dbp7 - Aspergillus niger| Length = 771 Score = 41.6 bits (96), Expect = 0.016 Identities = 36/143 (25%), Positives = 63/143 (44%) Frame = +2 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 P A R+ GS+ R A + F +++ V L+ T G++L D V+ YD F+ Sbjct: 503 PVALHRLHGSLPQHVRTATLGAFARNREPSV-LICTDVASRGLDLPNVDLVVEYDPAFSA 561 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 + + R R+G+ R L++ + EE + + KK K+ ++ +D Sbjct: 562 EDHLHRIGRTARLGRDGRALIF---LMPGCEEGYVDILKKGYRDG----GKALTRNSADD 614 Query: 2135 IIRWGTEELFRNNDEVNGKDNDE 2203 I++ G F N E D +E Sbjct: 615 ILKRG----FGGNVESQNVDWEE 633
>Q5JKF2:RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 - Oryza sativa subsp. japonica| (Rice) Length = 792 Score = 41.2 bits (95), Expect = 0.021 Identities = 35/124 (28%), Positives = 57/124 (45%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 I S KL L +L+ S G +VLIF ++ D L LT +FG A + G S + Sbjct: 376 ITPSEKLRRLEQILRSQDS-GSKVLIFCTTKRMCDQLARTLTRQFGASA---IHGDKSQS 431 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 ER+ ++ F ++ + + GL I D ++ + DF + + HRIG Sbjct: 432 EREKVLSHFRSGRSPILVATDVAARGLDIK----DIRVVINYDFPTGIE----DYVHRIG 483 Query: 1997 QSNR 2008 ++ R Sbjct: 484 RTGR 487
>A5AA68:DBP8_ASPNG ATP-dependent RNA helicase dbp8 - Aspergillus niger| Length = 522 Score = 40.8 bits (94), Expect = 0.027 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 9/164 (5%) Frame = +2 Query: 1592 TEPESGSPEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL 1765 TE + P L + +++ + + A LH +L + +IF TK D+LE L Sbjct: 310 TENNASIPPTLKQTYLKVPMTHREAFLHVLLSTEANASKPAIIFCNHTKTADLLERMLR- 368 Query: 1766 EFGPKAFERVDGSVSV---AERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 + RV S+ +ER A + RF R L++T G+++ + + V+ + Sbjct: 369 ----RLSHRVTSLHSLLPQSERNANLARFRASAAR--LLVATDVASRGLDIPSVELVVNF 422 Query: 1937 DSDFNPHADIQAMN---RAHRIGQSNRLLVYRLV-VRASVEERI 2056 D NP + + RA R G+S L+ R V + ++EER+ Sbjct: 423 DVPRNPDDYVHRVGRTARAGRKGESVTLVGQRDVSLVLAIEERV 466
>Q1E9T9:DBP7_COCIM ATP-dependent RNA helicase DBP7 - Coccidioides immitis| Length = 769 Score = 40.8 bits (94), Expect = 0.027 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 1/147 (0%) Frame = +2 Query: 1790 RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1969 ++ GS+ R A ++ F + K V L+ T G++L D VI YD F + Sbjct: 509 KLHGSLPQHVRTATLSAFAKQKDASV-LICTDVAARGLDLPNVDFVIEYDPAFCSDDHLH 567 Query: 1970 AMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWG 2149 + R R+G+ R L++ L EE + + K + S ++ EV +I++ G Sbjct: 568 RIGRTARLGRDGRALIFLL---PGNEEGYVDILKGSYREGS---SNSVTRNEVNEILKRG 621 Query: 2150 TEELFRNNDEVNGKD-NDEASDAKHDV 2227 F N E K D+A+D + D+ Sbjct: 622 ----FGGNSEAISKGWEDKATDWQLDI 644
>A4QYM6:DRS1_MAGGR ATP-dependent RNA helicase DRS1 - Magnaporthe grisea (Rice blast| fungus) (Pyricularia grisea) Length = 790 Score = 40.0 bits (92), Expect = 0.047 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 13/194 (6%) Frame = +2 Query: 1616 EFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFE-- 1789 EF+ + ++ L + K L+++ RV+IF + K+ + + FG Sbjct: 475 EFVRLRPGREEKRMGYLVYLCKNLYTE--RVIIFFRQKKIAH----HARIIFGLLGLSCA 528 Query: 1790 RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1969 + GS+S +R ++ F K F LL+T G+++ DTVI Y++ + + Sbjct: 529 ELHGSMSQIQRIQSVEAFRDGKVSF--LLATDLASRGLDIKGVDTVINYEAPQSLEIYVH 586 Query: 1970 AMNRAHRIGQSNRLLVY-----RLVVRASVEERILQLAKKKLML------DQLFVNKSES 2116 + R R G+S + R VV+A+V+ Q AK + D E Sbjct: 587 RVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISSRIIDAADADSWQAKIDEL 646 Query: 2117 QKEVEDIIRWGTEE 2158 + EVE ++R EE Sbjct: 647 EDEVEAVMREEKEE 660
>Q4WV71:DBP7_ASPFU ATP-dependent RNA helicase dbp7 - Aspergillus fumigatus (Sartorya| fumigata) Length = 758 Score = 40.0 bits (92), Expect = 0.047 Identities = 33/140 (23%), Positives = 63/140 (45%) Frame = +2 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 P R+ GS+ R + + F ++K V L+ T G++L D V+ YD F+ Sbjct: 491 PVTLFRLHGSLPQNVRTSTLGAFAKNKEASV-LICTDVASRGLDLPNVDLVVEYDPAFSA 549 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 + + R R+G+ R L++ ++ EE +++ K+ K+ ++ + + Sbjct: 550 EDHLHRIGRTARVGRDGRALIF---LQPGCEENYVEVLKRGYRDG----GKALTRADANE 602 Query: 2135 IIRWGTEELFRNNDEVNGKD 2194 I++ G F N E KD Sbjct: 603 ILKRG----FGGNVESGNKD 618
>Q2UQI6:DRS1_ASPOR ATP-dependent RNA helicase drs1 - Aspergillus oryzae| Length = 820 Score = 39.7 bits (91), Expect = 0.061 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 7/188 (3%) Frame = +2 Query: 1616 EFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERV 1795 EF+ + +L L + K +++ RV++F + K + L G KA E + Sbjct: 522 EFVRLRPGREDKRLGYLLHLCKEVYTG--RVIVFFRQKKEAHRVRIAFGL-LGLKAAE-L 577 Query: 1796 DGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 GS+S +R ++ F + K F LL+T G+++ +TVI Y++ + + + Sbjct: 578 HGSMSQEQRIRSVENFREGKVSF--LLATDLAARGLDIKGVETVINYEAPQSHEIYLHRV 635 Query: 1976 NRAHRIGQSNRLLVY-----RLVVRASVEERILQLAK-KKLMLDQLFVNK-SESQKEVED 2134 R R G+S R R VV+A+V+ Q AK ++D ++ ++ K++E+ Sbjct: 636 GRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPAVADRWAQKAKDLEE 695 Query: 2135 IIRWGTEE 2158 I EE Sbjct: 696 EINAVLEE 703
>Q0DLB9:RH17_ORYSJ DEAD-box ATP-dependent RNA helicase 17 - Oryza sativa subsp. japonica| (Rice) Length = 591 Score = 38.9 bits (89), Expect = 0.10 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 18/148 (12%) Frame = +2 Query: 1631 MRIKASAKLALLHSMLKVLHSD--GHRVLIFSQMTKLLDILEDYLT-LEFGP-------- 1777 +++ ++LA+L ++LK L H+V++F +D L+ LE+ P Sbjct: 299 VKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDK 358 Query: 1778 -------KAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 K F R+ G++ +R+ + F+ +K+ L+ST G++ +I Y Sbjct: 359 KQKFISCKVF-RLHGNMDQDDRKKSFLGFSSEKS--AILVSTDVAARGLDFPKVKCIIQY 415 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 DS + + R RIG+ L++ Sbjct: 416 DSPGEASEYVHRVGRTARIGEKGEALLF 443
>Q9YVX9:ETF1_MSEPV Early transcription factor 70 kDa subunit - Melanoplus sanguinipes| entomopoxvirus (MsEPV) Length = 674 Score = 38.9 bits (89), Expect = 0.10 Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 2/194 (1%) Frame = +2 Query: 704 LFPHQLEALNWLRKCWFKSK-NVILADEMGLGKTVSACAFLSSLCCEFKINLPCLVLVPL 880 + PHQL L++L + K K +V+L +MG GKT+ + F E KI ++L Sbjct: 21 ILPHQLATLDFLNERSLKEKKSVLLFHKMGSGKTIISLLFSIIASIETKI---LIILPNT 77 Query: 881 STMPNWMAEFASWAPHLNVVEYHGSARARSAIRQYEWHEGDATQIGKSKKSHKFNVLLTT 1060 S M W+++ LN + + R E +G +K N ++T Sbjct: 78 SIMDIWISKLYDSLLLLNKNDKYNLNNIEFTTRSRLNEE----LLGTNK---NINDIIT- 129 Query: 1061 YEMVLVDATYLRSVPWEVLIVDEGHRXXXXXXXXXXXXXXXXXQHR-VLLTGTPLQNNIG 1237 ++ ++I+DE H R VLLTG+P+ N I Sbjct: 130 --------ENIKKYDNYIIIIDEAHNFFGNASGELLIHIKQNSTARYVLLTGSPISNTIE 181 Query: 1238 EMYNLLNFLQPASF 1279 + +++ L +F Sbjct: 182 SLKDIVELLTNETF 195
>P51555:ENO1_ENTHI Enolase 1 - Entamoeba histolytica| Length = 436 Score = 38.9 bits (89), Expect = 0.10 Identities = 44/166 (26%), Positives = 67/166 (40%) Frame = +2 Query: 2 VGPEEATKTVSDCCTDHIITIKDSGVVGENIPSVNGELEAVSDVPAAGTSEKGDIKLPLS 181 +GP K V + + IK G + N L + A +EKG LPL Sbjct: 73 IGPALLGKNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKG---LPLY 129 Query: 182 EVDATVHTKQELTPESKVYGNINEIAGNGHDDTAYEFLVKWAGKSNIHNSWISESELRTL 361 + A + +E+T + IN A G+ EF++ G +N H + +E Sbjct: 130 KYLAELTGHKEMTMPVPCFNVINGGAHAGNALAMQEFMICPTGATNFHEALRMAAETYQC 189 Query: 362 AKRKLENYKAKYGMGLINICKDQWCQPQRVIALRVSLDEVEEALIK 499 K + KAKYG N+ + P V R +LD + EA+ K Sbjct: 190 LKVVI---KAKYGQDATNVGDEGGFAP-NVSGAREALDLLVEAIAK 231
>Q0CZN5:DRS1_ASPTN ATP-dependent RNA helicase drs1 - Aspergillus terreus (strain NIH| 2624) Length = 821 Score = 38.9 bits (89), Expect = 0.10 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 11/134 (8%) Frame = +2 Query: 1772 GPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1951 G KA E + GS+S +R ++ F K FLL+T G+++ +TVI Y++ + Sbjct: 573 GLKAAE-LHGSMSQEQRIKSVENFRDGKV--AFLLATDLASRGLDIKGVETVINYEAPQS 629 Query: 1952 PHADIQAMNRAHRIGQSNRLLVY-----RLVVRASVEERILQLAK------KKLMLDQLF 2098 + + R R G+S R R VV+A+V+ Q AK + DQ Sbjct: 630 HEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPAVADQWA 689 Query: 2099 VNKSESQKEVEDII 2140 ++ ++E+ +++ Sbjct: 690 KKAADLEEEINEVL 703
>Q5BGX6:DBP7_EMENI ATP-dependent RNA helicase dbp7 - Emericella nidulans (Aspergillus| nidulans) Length = 778 Score = 38.9 bits (89), Expect = 0.10 Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 14/136 (10%) Frame = +2 Query: 1790 RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1969 ++ GS+ R + ++ F +++ V L+ T G++L D V+ YD F+ + Sbjct: 518 KLHGSLPQHVRTSTLSSFAKNRDPSV-LICTDVASRGLDLPNVDLVVEYDPAFSADEHLH 576 Query: 1970 AMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL--------------MLDQLFVNK 2107 + R R+G+ R LV+ L EE +++ K+ +L + F Sbjct: 577 RIGRTARLGRDGRALVFLL---PGCEENYVEILKRGYRDGGKALTRSTTDDILKRGFGGN 633 Query: 2108 SESQKEVEDIIRWGTE 2155 ESQK ++ RW + Sbjct: 634 IESQKWQLELERWALD 649
>Q2UE66:DBP7_ASPOR ATP-dependent RNA helicase dbp7 - Aspergillus oryzae| Length = 760 Score = 38.9 bits (89), Expect = 0.10 Identities = 30/125 (24%), Positives = 57/125 (45%) Frame = +2 Query: 1775 PKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1954 P ++ GS+ R A + F++++ V L+ T G++L D VI YD F+ Sbjct: 496 PVKLHKLHGSLPQHVRTATLNAFSREREPSV-LVCTDVASRGLDLPNVDLVIEYDPAFSA 554 Query: 1955 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 + R R+G+ R L++ + EE +++ K+ K+ ++ ED Sbjct: 555 DDHTHRIGRTARLGRDGRALIF---LMPGCEENYVEILKQGYRDG----GKALTRTTAED 607 Query: 2135 IIRWG 2149 I++ G Sbjct: 608 ILKRG 612
>Q75B50:DED1_ASHGO ATP-dependent RNA helicase DED1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 623 Score = 38.5 bits (88), Expect = 0.14 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 3/143 (2%) Frame = +2 Query: 1589 GTEPESGSPEFLHEMRI-KASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL 1765 G+ E+ + + LH I K S L LL + SDG L+F + ++ D L D+L + Sbjct: 371 GSTSENITQKVLHVEDIDKRSVLLDLLAA------SDGGLTLVFVETKRMADALTDFLIM 424 Query: 1766 EFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYD-- 1939 + + + G + AER+ A+ F + L++T G+++ VI YD Sbjct: 425 Q--NLSATAIHGDRTQAERERALAFFRTGRAN--VLVATAVAARGLDIPNVTHVINYDLP 480 Query: 1940 SDFNPHADIQAMNRAHRIGQSNR 2008 SD + + HRIG++ R Sbjct: 481 SDIDDY--------VHRIGRTGR 495
>Q1E0Z3:DBP8_COCIM ATP-dependent RNA helicase DBP8 - Coccidioides immitis| Length = 536 Score = 37.7 bits (86), Expect = 0.23 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%) Frame = +2 Query: 1592 TEPESGSPEFLHE--MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTL 1765 TE + P L + +++ + + A LH +L + +IF TK D+L D L Sbjct: 324 TENNTTIPPTLKQCYLQVPMTHREAFLHVLLSTDANSSKPAIIFCNRTKTADLL-DRLLR 382 Query: 1766 EFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSD 1945 G + + + +ER + + RF R L++T G+++ + V+ +D Sbjct: 383 RLGHRV-TSLHSLLPQSERTSNLARFRASAAR--LLVATDVAARGLDIPSVGLVVNFDVP 439 Query: 1946 FNPHADIQAMNRAHRIGQSNRLLV------YRLVVRASVEERI 2056 NP I + R R G+ + +LV+ ++EER+ Sbjct: 440 RNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVL--AIEERV 480
>Q91VN6:DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 - Mus musculus (Mouse)| Length = 622 Score = 37.4 bits (85), Expect = 0.30 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 8/197 (4%) Frame = +2 Query: 1517 GAHQSLLNIVMQLRKVCNH-------PYLIPGTEPESGSPEFLHEMR-IKASAKLALLHS 1672 G Q+LL +K+ N P I + S + + E+ +K AK+ L Sbjct: 367 GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-- 424 Query: 1673 MLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQD 1852 L+ L VLIF++ +D + +YL L+ G +A + G ER AI F + Sbjct: 425 -LECLQKTPPPVLIFAEKKADVDAIHEYLLLK-GVEAV-AIHGGKDQEERTKAIEAFREG 481 Query: 1853 KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV 2032 K L++T G++ VI YD P ++R R G+S + + Sbjct: 482 KKD--VLVATDVASKGLDFPAIQHVINYDM---PEEIENYVHRIGRTGRSGNTGIATTFI 536 Query: 2033 RASVEERILQLAKKKLM 2083 + +E +L K L+ Sbjct: 537 NKACDESVLMDLKALLL 553
>Q9UJV9:DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 - Homo sapiens (Human)| Length = 622 Score = 37.4 bits (85), Expect = 0.30 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 8/197 (4%) Frame = +2 Query: 1517 GAHQSLLNIVMQLRKVCNH-------PYLIPGTEPESGSPEFLHEMR-IKASAKLALLHS 1672 G Q+LL +K+ N P I + S + + E+ +K AK+ L Sbjct: 367 GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-- 424 Query: 1673 MLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQD 1852 L+ L VLIF++ +D + +YL L+ G +A + G ER AI F + Sbjct: 425 -LECLQKTPPPVLIFAEKKADVDAIHEYLLLK-GVEAV-AIHGGKDQEERTKAIEAFREG 481 Query: 1853 KTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVV 2032 K L++T G++ VI YD P ++R R G+S + + Sbjct: 482 KKD--VLVATDVASKGLDFPAIQHVINYDM---PEEIENYVHRIGRTGRSGNTGIATTFI 536 Query: 2033 RASVEERILQLAKKKLM 2083 + +E +L K L+ Sbjct: 537 NKACDESVLMDLKALLL 553
>A1D1R8:DRS1_NEOFI ATP-dependent RNA helicase drs1 - Neosartorya fischeri (strain ATCC| 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 819 Score = 37.0 bits (84), Expect = 0.39 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 11/135 (8%) Frame = +2 Query: 1772 GPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1951 G KA E + GS+S +R ++ F + K FLL+T G+++ +TVI Y++ + Sbjct: 568 GLKAAE-LHGSMSQEQRIKSVENFREGKV--AFLLATDLASRGLDIKGVETVINYEAPQS 624 Query: 1952 PHADIQAMNRAHRIGQSNRLLVY-----RLVVRASVEERILQLAK------KKLMLDQLF 2098 + + R R G+S R R +V+++V+ Q AK + D+ Sbjct: 625 HEIYLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVVDPAVADEWA 684 Query: 2099 VNKSESQKEVEDIIR 2143 + E+E++++ Sbjct: 685 AKAKGLEDEIEEVLQ 699
>Q4WRV2:DRS1_ASPFU ATP-dependent RNA helicase drs1 - Aspergillus fumigatus (Sartorya| fumigata) Length = 830 Score = 37.0 bits (84), Expect = 0.39 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 11/135 (8%) Frame = +2 Query: 1772 GPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1951 G KA E + GS+S +R ++ F + K FLL+T G+++ +TVI Y++ + Sbjct: 579 GLKAAE-LHGSMSQEQRIKSVENFREGKV--AFLLATDLASRGLDIKGVETVINYEAPQS 635 Query: 1952 PHADIQAMNRAHRIGQSNRLLVY-----RLVVRASVEERILQLAK------KKLMLDQLF 2098 + + R R G+S R R +V+++V+ Q AK + D+ Sbjct: 636 HEIYLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVVDPAVADEWA 695 Query: 2099 VNKSESQKEVEDIIR 2143 + E+E++++ Sbjct: 696 AKAKGLEDEIEEVLQ 710
>Q4P7Z8:DBP5_USTMA ATP-dependent RNA helicase DBP5 - Ustilago maydis (Smut fungus)| Length = 456 Score = 37.0 bits (84), Expect = 0.39 Identities = 28/100 (28%), Positives = 44/100 (44%) Frame = +2 Query: 1709 LIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRS 1888 +IF + D + +T E G K + + G + A+R I F K++ L+ST Sbjct: 306 IIFCAKRETADRIAQKMTQE-GHKV-DSLHGRLETADRDRTIDAFRDGKSKV--LISTNV 361 Query: 1889 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 2008 GI++ VI YD + A HRIG++ R Sbjct: 362 IARGIDIQQVTLVINYDMPLTQTGEADAETYLHRIGRTGR 401
>P0A4D8:EXP9_STRR6 Probable ATP-dependent RNA helicase exp9 - Streptococcus pneumoniae| (strain ATCC BAA-255 / R6) Length = 524 Score = 36.6 bits (83), Expect = 0.51 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 21/181 (11%) Frame = +2 Query: 1715 FSQMTKLLDILEDYLTLEFGPKAFERVD-----------------GSVSVAERQAAITRF 1843 F MT+L+D+ + L + FG + RVD G + +R + F Sbjct: 227 FDTMTRLMDVAQPELAIVFG-RTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDF 285 Query: 1844 NQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYR 2023 L++T G++++ V YD +P + + + R R G+S + + + Sbjct: 286 KNG--NLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFV 343 Query: 2024 LVVRASVEERILQLAKKKLM-LDQLFVNKS-ESQKEV--EDIIRWGTEELFRNNDEVNGK 2191 + I L KK++ L V +S +S+K+V + I R +E R N E GK Sbjct: 344 APNEMGYLQIIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGK 403 Query: 2192 D 2194 D Sbjct: 404 D 404
>P0A4D7:EXP9_STRPN Probable ATP-dependent RNA helicase exp9 - Streptococcus pneumoniae| Length = 524 Score = 36.6 bits (83), Expect = 0.51 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 21/181 (11%) Frame = +2 Query: 1715 FSQMTKLLDILEDYLTLEFGPKAFERVD-----------------GSVSVAERQAAITRF 1843 F MT+L+D+ + L + FG + RVD G + +R + F Sbjct: 227 FDTMTRLMDVAQPELAIVFG-RTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDF 285 Query: 1844 NQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYR 2023 L++T G++++ V YD +P + + + R R G+S + + + Sbjct: 286 KNG--NLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFV 343 Query: 2024 LVVRASVEERILQLAKKKLM-LDQLFVNKS-ESQKEV--EDIIRWGTEELFRNNDEVNGK 2191 + I L KK++ L V +S +S+K+V + I R +E R N E GK Sbjct: 344 APNEMGYLQIIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGK 403 Query: 2192 D 2194 D Sbjct: 404 D 404
>A2QAX7:DRS1_ASPNG ATP-dependent RNA helicase drs1 - Aspergillus niger| Length = 824 Score = 36.2 bits (82), Expect = 0.67 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 11/186 (5%) Frame = +2 Query: 1616 EFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERV 1795 EF+ + +L L + K +++ RV++F + K + L G KA E + Sbjct: 529 EFVRLRPGREDKRLGYLLYLCKEIYTG--RVIVFFRQKKEAHRVRIIFGL-LGLKAAE-L 584 Query: 1796 DGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 GS+S ++ ++ F + K FLL+T G+++ +TVI Y++ + + + Sbjct: 585 HGSMS---QEQSVENFREGKA--AFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 639 Query: 1976 NRAHRIGQSNRLLVY-----RLVVRASVEERILQLAK------KKLMLDQLFVNKSESQK 2122 R R G+S R R VV+A+V+ Q AK + + D E Sbjct: 640 GRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIASRVIEPAVADSWAAKAEELAD 699 Query: 2123 EVEDII 2140 EVE+++ Sbjct: 700 EVEEVL 705
>Q5B3H7:DBP8_EMENI ATP-dependent RNA helicase dbp8 - Emericella nidulans (Aspergillus| nidulans) Length = 525 Score = 36.2 bits (82), Expect = 0.67 Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 12/201 (5%) Frame = +2 Query: 1631 MRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVS 1810 +++ + + A LH +L + ++F+ TK D+LE L G + + + Sbjct: 328 VQVPLTHREAFLHVLLSTESNITKSAIVFTNTTKSADLLERLLR-SLGHRV-TSLHSLLP 385 Query: 1811 VAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1990 +ER + + RF R L++T G+++ + V+ ++ NP + + R R Sbjct: 386 QSERNSNLARFRASAAR--VLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRVGRTAR 443 Query: 1991 IGQSNRLLV------YRLVVRASVEERILQLAKKKLMLDQLFVN------KSESQKEVED 2134 G++ + +LV+ ++EERI +K + ++ VN K KEV Sbjct: 444 AGRTGEAVTLVGQRDVQLVL--AIEERI---GRKMVEYEEEGVNLEARVAKGSLLKEVGA 498 Query: 2135 IIRWGTEELFRNNDEVNGKDN 2197 R E+ D + K N Sbjct: 499 AKREAMVEIDEGRDVLGRKRN 519
>Q9V3C0:ABS_DROME ATP-dependent RNA helicase abstrakt - Drosophila melanogaster (Fruit| fly) Length = 619 Score = 36.2 bits (82), Expect = 0.67 Identities = 43/168 (25%), Positives = 74/168 (44%) Frame = +2 Query: 1637 IKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVA 1816 +K AK+ L L L VLIF++ + +D + +YL L+ G +A + G Sbjct: 411 VKQEAKVVYL---LDCLQKTAPPVLIFAEKKQDVDCIHEYLLLK-GVEAV-AIHGGKDQE 465 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1996 ER A+ + K L++T G++ VI YD P ++R R G Sbjct: 466 ERSRAVDAYRVGKKD--VLVATDVASKGLDFPNVQHVINYDM---PDDIENYVHRIGRTG 520 Query: 1997 QSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDII 2140 +SN + ++ + E+ +L L K L++ E ++EV D + Sbjct: 521 RSNTKGLATTLINKTTEQSVL-LDLKHLLI--------EGKQEVPDFL 559
>Q8NDX6:ZN740_HUMAN Zinc finger protein 740 - Homo sapiens (Human)| Length = 193 Score = 35.8 bits (81), Expect = 0.88 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = +2 Query: 2066 AKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASDAKHDVSDIEVK 2245 A KK+ML Q+ + K+ E+ R G+ ++ R + + + KD+D++ K D S E Sbjct: 22 ASKKMMLSQI------ASKQAENGERAGSPDVLRCSSQGHRKDSDKSRSRKDDDSLSEAS 75 Query: 2246 HRRKT 2260 H +KT Sbjct: 76 HSKKT 80
>Q8H136:RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 619 Score = 35.8 bits (81), Expect = 0.88 Identities = 26/108 (24%), Positives = 46/108 (42%) Frame = +2 Query: 1697 GHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLL 1876 G +V+IF ++ D L LT +FG A + G S ER + +F +T L+ Sbjct: 403 GSKVIIFCSTKRMCDQLTRNLTRQFGAAA---IHGDKSQPERDNVLNQFRSGRT--PVLV 457 Query: 1877 STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 +T G+++ V+ YD + + R R G + + + Sbjct: 458 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>P46942:DB10_NICSY ATP-dependent RNA helicase-like protein DB10 - Nicotiana sylvestris| (Wood tobacco) Length = 607 Score = 35.8 bits (81), Expect = 0.88 Identities = 28/102 (27%), Positives = 43/102 (42%) Frame = +2 Query: 1697 GHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLL 1876 G +++IF K+ D L LT FG A + G S ER +++F R L+ Sbjct: 390 GSKIIIFCSTKKMCDQLSRNLTRNFGAAA---IHGDKSQGERDYVLSQFRAG--RSPVLV 444 Query: 1877 STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 2002 +T G+++ VI YD + + R R G S Sbjct: 445 ATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGAS 486
>Q5RB81:SUV91_PONPY Histone-lysine N-methyltransferase SUV39H1 - Pongo pygmaeus| (Orangutan) Length = 412 Score = 35.4 bits (80), Expect = 1.1 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +2 Query: 476 EVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQF-KNFECQALDRDVRGNCANARNR 652 E E L+KW G P E TWE LK V ++ QF K+ E + L R R + Sbjct: 56 EQEYYLVKWRGYPDSESTWEPRQN---LKCVRILKQFHKDLERELLRRHHRSKTPRHLDP 112 Query: 653 QELTVLIQQPKELKGGMLFPHQLEA 727 L+Q+ K+ + + +L A Sbjct: 113 SLANYLVQKAKQRRALRRWEQELNA 137
>O43463:SUV91_HUMAN Histone-lysine N-methyltransferase SUV39H1 - Homo sapiens (Human)| Length = 412 Score = 35.4 bits (80), Expect = 1.1 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +2 Query: 476 EVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQF-KNFECQALDRDVRGNCANARNR 652 E E L+KW G P E TWE LK V ++ QF K+ E + L R R + Sbjct: 56 EQEYYLVKWRGYPDSESTWEPRQN---LKCVRILKQFHKDLERELLRRHHRSKTPRHLDP 112 Query: 653 QELTVLIQQPKELKGGMLFPHQLEA 727 L+Q+ K+ + + +L A Sbjct: 113 SLANYLVQKAKQRRALRRWEQELNA 137
>Q6FML5:PRP5_CANGA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 - Candida| glabrata (Yeast) (Torulopsis glabrata) Length = 816 Score = 35.4 bits (80), Expect = 1.1 Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 6/208 (2%) Frame = +2 Query: 1646 SAKLALLHSMLKVLHSD--GHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAE 1819 S K L S+LKV +S+ + +IF ++ DI+E LT ++ K + + E Sbjct: 485 SDKFKELLSLLKVFNSETVDEKTIIFVSSQQICDIIEKRLT-DYSEKLYS-IHAGRPYNE 542 Query: 1820 RQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 R+ + F KT LL T G+N+ VI+Y+S + + R R G Sbjct: 543 RRQNLELFK--KTSNSILLCTEVMSRGLNVPEVSRVILYNSAKTFAQYVHSTGRTAR-GT 599 Query: 2000 SNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEV----EDIIRWGTEELFR 2167 + L+ IL A + + V + ++ K++ ED ++ G +L Sbjct: 600 REGTSISLLLPNELSSAYILNKAMRDKDFSECPVKEVKNLKQMAQKFEDGLKSGKYKLST 659 Query: 2168 NNDEVNGKDNDEASDAKHDVSDIEVKHR 2251 ++ D + + ++ D ++KH+ Sbjct: 660 GLGGKGLENMDNSKETSNNDLDEQLKHQ 687
>Q1RKN3:TLH2_SCHPO ATP-dependent DNA helicase tlh2 - Schizosaccharomyces pombe (Fission| yeast) Length = 1919 Score = 35.0 bits (79), Expect = 1.5 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 2/180 (1%) Frame = +2 Query: 1466 RAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKA 1645 R N+ VLR T A +++ + HPY + EFL ++R Sbjct: 1366 RQTFCTNFYVLRETST--ARENIFYFL--------HPY---------DNTEFLLDLRT-- 1404 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLE--FGPKAFERVDGSVSVAE 1819 L KV DG R +IF + K ++ + L F G VS E Sbjct: 1405 ------LMKRTKVFEGDG-RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEE 1457 Query: 1820 RQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 RQ F + +++T++ GLGIN V+ Y + +Q RA R G+ Sbjct: 1458 RQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGK 1517
>Q5EAK4:TLH1_SCHPO ATP-dependent DNA helicase tlh1 - Schizosaccharomyces pombe (Fission| yeast) Length = 2100 Score = 35.0 bits (79), Expect = 1.5 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 2/180 (1%) Frame = +2 Query: 1466 RAMLTKNYQVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKA 1645 R N+ VLR T A +++ + HPY + EFL ++R Sbjct: 1547 RQTFCTNFYVLRETST--ARENIFYFL--------HPY---------DNTEFLLDLRT-- 1585 Query: 1646 SAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLE--FGPKAFERVDGSVSVAE 1819 L KV DG R +IF + K ++ + L F G VS E Sbjct: 1586 ------LMKRTKVFEGDG-RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEE 1638 Query: 1820 RQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 RQ F + +++T++ GLGIN V+ Y + +Q RA R G+ Sbjct: 1639 RQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGK 1698
>Q04031:RRP17_YEAST Ribosomal RNA-processing protein 17 - Saccharomyces cerevisiae| (Baker's yeast) Length = 235 Score = 35.0 bits (79), Expect = 1.5 Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%) Frame = +2 Query: 2030 VRASVEERILQLAKKKLMLDQL--FVNKSESQKEVEDIIRWGTEELFRNNDEV-NGKDND 2200 +R E + ++ +K++M +QL F + E+ED TE+L +DE +G D+D Sbjct: 64 LRKIEERQKIRQERKEVMEEQLKTFKESLNLEAEIEDAKNDKTEDLQVESDESWHGFDSD 123 Query: 2201 EASDAKHDVSDIEVKHRRKTGGLGDVYED 2287 + D +D ++ VK K G + ++Y+D Sbjct: 124 K-DDGDNDNNESSVKPILKKGAITEIYDD 151
>Q7T6Y0:PCNA_MIMIV Probable DNA polymerase sliding clamp - Mimivirus| Length = 464 Score = 35.0 bits (79), Expect = 1.5 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = +2 Query: 2033 RASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASD 2212 + S+++++ KK+ K ES +V D ++ N+D ++ +ND+ D Sbjct: 70 KTSLKKQVKTPPKKQTKTSSKKNKKDESDDDVTDNSDISDDDNTGNSD-ISDDENDQEED 128 Query: 2213 AKHDVSDIEVKHRRKTGGL-GDVYEDKCIGSSTKLIWDENA 2332 + E + R+K+ G G+V +D +GSS KL D+NA Sbjct: 129 NDISSDEEETETRQKSSGKKGNVNKD--VGSSRKLKTDKNA 167
>Q9T1Q7:VP41_BPAPS Putative protein p41 - Bacteriophage APSE-1| Length = 460 Score = 34.7 bits (78), Expect = 2.0 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +2 Query: 785 MGLGKTVSACAFLSSLCCEFKINLPCLVLVPLS-TMPNWMAEFASWAPHLNVVEYH---G 952 MG+GKT + L +L P LVL PL W E W+ HL +E G Sbjct: 29 MGMGKTAATLTALENLYLSGSETKPTLVLAPLRVAQSTWPDEALKWS-HLRNIEVQPIIG 87 Query: 953 SARARSA 973 SA+AR A Sbjct: 88 SAKARIA 94
>Q2NL30:SUV91_BOVIN Histone-lysine N-methyltransferase SUV39H1 - Bos taurus (Bovine)| Length = 412 Score = 34.7 bits (78), Expect = 2.0 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +2 Query: 476 EVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQF-KNFECQALDRDVRGNCANARNR 652 E E L+KW G P E TWE LK V ++ QF K+ E + L R R + Sbjct: 56 EQEYYLVKWRGYPDSESTWEPRQN---LKCVRILKQFHKDLERELLRRHHRSKPPRHLDP 112 Query: 653 QELTVLIQQPKELKGGMLFPHQLEA 727 L+Q+ K+ + + +L A Sbjct: 113 SLANYLVQKAKQRRALRRWEQELNA 137
>Q3EBD3:RH41_ARATH DEAD-box ATP-dependent RNA helicase 41 - Arabidopsis thaliana| (Mouse-ear cress) Length = 505 Score = 34.3 bits (77), Expect = 2.6 Identities = 25/94 (26%), Positives = 44/94 (46%) Frame = +2 Query: 1739 DILEDYLTLEFGPKAFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATA 1918 D+L + +T+ G KA + G + ER+ + F + L+ST G G++L Sbjct: 371 DLLANAITVVTGVKALS-IHGEKPMKERRDVMGSFLGGEVPV--LVSTGVLGRGVDLLVV 427 Query: 1919 DTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 VI++D I + RA R+G+ +V+ Sbjct: 428 RQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVF 461
>Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - Staphylococcus| haemolyticus (strain JCSC1435) Length = 3608 Score = 34.3 bits (77), Expect = 2.6 Identities = 25/66 (37%), Positives = 33/66 (50%) Frame = -1 Query: 198 TVASTSESGSLISPFSDVPAAGTSDTASSSPFTEGMFSPTTPESFMVMIWSVQQSDTVFV 19 T STS SGS + SD +A TSD+AS+S S +T +S SV S + Sbjct: 1031 TSTSTSLSGSTSTSVSDSTSASTSDSASTSTSVSDSTSASTSDSASTST-SVSDSTSTST 1089 Query: 18 ASSGPT 1 + SG T Sbjct: 1090 SLSGST 1095 Score = 32.3 bits (72), Expect = 9.7 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -1 Query: 234 TLLSGVNSCLVC--TVASTSESGSLISPFSDVPAAGTSDTASSSPFTEGMFSPTT 76 T LSG S V T ASTS SGS + SD + TSD+AS+S S +T Sbjct: 2673 TSLSGSTSTSVSDSTSASTSLSGSTSTSVSDSTSTSTSDSASTSTSVSDSTSAST 2727
>Q7XJN0:RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 - Arabidopsis thaliana| (Mouse-ear cress) Length = 609 Score = 33.9 bits (76), Expect = 3.3 Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 18/148 (12%) Frame = +2 Query: 1631 MRIKASAKLALLHSMLKVL--HSDGHRVLIFSQMTKLLDILEDYL----------TLEFG 1774 +R+ A+L L S+LK L +V++F +D L T E G Sbjct: 307 LRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEG 366 Query: 1775 PKAFE------RVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIY 1936 K R+ GS+ +R++A F +K LLST G++ +I Y Sbjct: 367 TKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQ--AVLLSTDVAARGLDFPKVRCIIQY 424 Query: 1937 DSDFNPHADIQAMNRAHRIGQSNRLLVY 2020 D + + R RIG+ L++ Sbjct: 425 DCPGEATEYVHRVGRTARIGEKGEALLF 452
>Q6CKI1:PRP5_KLULA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 812 Score = 33.5 bits (75), Expect = 4.4 Identities = 42/173 (24%), Positives = 70/173 (40%) Frame = +2 Query: 1616 EFLHEMRIKASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERV 1795 + E +K L L L + + + +IF +L D+L D L L G F Sbjct: 473 QIFDEEHVKFEFLLKRLSDRLALHRGEDEKTIIFVGSQQLCDLLYDELLLN-GITTFPIH 531 Query: 1796 DGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1975 G S AER + +F + T L+ T G+N+ VIIY++ + + Sbjct: 532 AGKPS-AERLRNLQKFKE--TDNGILICTEVLSRGLNVPEVSLVIIYNAAKTIAQYVHTV 588 Query: 1976 NRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVED 2134 R R G +N + + ++V IL K+ L + + + KE+ D Sbjct: 589 GRTGR-GTNNGVALSFVMVDELASAYILVKCMKENELSSVPMVVYQKLKEMND 640
>Q4P733:DED1_USTMA ATP-dependent RNA helicase DED1 - Ustilago maydis (Smut fungus)| Length = 672 Score = 33.5 bits (75), Expect = 4.4 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Frame = +2 Query: 1640 KASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDY-LTLEFGPKAFERVDGSVSVA 1816 K S L +L SM G LIF + ++ D+L D+ L + G + + G + Sbjct: 436 KRSVLLDVLASM-----PSGGLTLIFVETKRMADMLSDFLLRSKIGATS---IHGDRTQR 487 Query: 1817 ERQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYD--SDFNPHADIQAMNRAHR 1990 ER+ A+ F KT +++T G+++ V+ YD SD + + HR Sbjct: 488 ERERALELFRSGKT--PIMVATAVAARGLDIPNVTHVVNYDLPSDVDDY--------VHR 537 Query: 1991 IGQSNR 2008 IG++ R Sbjct: 538 IGRTGR 543
>Q5F3A1:SEC62_CHICK Translocation protein SEC62 - Gallus gallus (Chicken)| Length = 398 Score = 33.5 bits (75), Expect = 4.4 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = +1 Query: 1330 ESGGAEETGSSTYASKAEKRCNEKYPPEDGANGACRTDINPG 1455 ESG EE S +SK EK EK +DG C+ D PG Sbjct: 116 ESGKEEEKKSKKESSKDEKTKKEKEKKKDGEKEECKKDETPG 157
>P27188:TRAB4_ECOLI Protein traB - Escherichia coli| Length = 146 Score = 33.1 bits (74), Expect = 5.7 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +2 Query: 1511 KGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMR-IKASAKLALLHSML-KV 1684 +G +++N Q+ +V N +L PE+G P+ +H++ K ++K H + +V Sbjct: 22 EGSVKIAVMNGSRQVDQVVNGEWLTMKVLPEAGLPKGIHQLSDAKDASKNVHPHKHVGQV 81 Query: 1685 LHSDGHRVLIFSQ 1723 LH DG V FS+ Sbjct: 82 LHDDGRNVYQFSE 94
>P13535:MYH8_HUMAN Myosin-8 - Homo sapiens (Human)| Length = 1937 Score = 33.1 bits (74), Expect = 5.7 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = +2 Query: 2036 ASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNNDEVNGKDN---DEA 2206 A EER QL K K+ L+ +E +E E+I N E+ K DE Sbjct: 902 ADAEERCEQLIKNKIQLEAKIKEVTERAEEEEEI-----------NAELTAKKRKLEDEC 950 Query: 2207 SDAKHDVSDIEV 2242 S+ K D+ D+E+ Sbjct: 951 SELKKDIDDLEL 962
>Q9LVG4:APRR3_ARATH Two-component response regulator-like APRR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 495 Score = 33.1 bits (74), Expect = 5.7 Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 16/117 (13%) Frame = +2 Query: 32 SDCCTDHIITIKDSGVVGENIPSVNGELEAVSDVPAAGT---SEKGDIKLPLSEVDATVH 202 +D T HI+T + + + E+ AV DV A EK I L L+EVD VH Sbjct: 71 NDDSTRHIVTAL--------LKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVH 122 Query: 203 TKQELTPE---SKVYGNINEIAGNGHD----------DTAYEFLVKWAGKSNIHNSW 334 + L + K NI I + HD + A +FLVK K+ + N W Sbjct: 123 SGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLW 179
>Q4R3E0:SUV92_MACFA Histone-lysine N-methyltransferase SUV39H2 - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 410 Score = 32.7 bits (73), Expect = 7.4 Identities = 26/100 (26%), Positives = 41/100 (41%) Frame = +2 Query: 359 LAKRKLENYKAKYGMGLINICKDQWCQPQRVIALRVSLDEVEEALIKWYGLPYDECTWER 538 + KR L NY+ +Y +C + + ++E L+KW G P TWE Sbjct: 39 ITKRNLNNYEVEY------LCDYK------------VVKDMEYYLVKWKGWPDSTNTWEP 80 Query: 539 LDEPIMLKYVHLVTQFKNFECQALDRDVRGNCANARNRQE 658 L LK L+ QF N + L + +G +N + Sbjct: 81 LQN---LKCPLLLQQFSNDKHNYLSQVKKGKAITPKNNNK 117
>Q8DB44:Y1979_VIBVU UPF0115 protein VV1_1979 - Vibrio vulnificus| Length = 176 Score = 32.3 bits (72), Expect = 9.7 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = +2 Query: 2072 KKLMLDQLFV--NKSESQKEVEDIIRWGTEELFRNNDEVNGKDNDEASD--AKHDVSDIE 2239 KKL D + N++ QKE++ I R ++ F +DE N+E A+ DVS E Sbjct: 23 KKLPQDTIVQQPNRNTKQKEIKRISREASDSEFYFSDEFVPLLNEEGPTRYARDDVSTYE 82 Query: 2240 VKHRRKTGGLGDVYED 2287 VK R+ + DV+ D Sbjct: 83 VKRLRRGVYVPDVFLD 98
>O54864:SUV91_MOUSE Histone-lysine N-methyltransferase SUV39H1 - Mus musculus (Mouse)| Length = 412 Score = 32.3 bits (72), Expect = 9.7 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +2 Query: 476 EVEEALIKWYGLPYDECTWERLDEPIMLKYVHLVTQF-KNFECQALDRDVRGNCANARNR 652 E E L+KW G P E TWE LK + ++ QF K+ E + + R R + Sbjct: 56 EQEYYLVKWRGYPDSENTWEPRQN---LKCIRVLKQFHKDLERELVRRHRRSKPPRHLDP 112 Query: 653 QELTVLIQQPKELKGGMLFPHQLEA 727 L+Q+ K+ + + +L A Sbjct: 113 NLANYLVQKAKQRRALQRWEQELNA 137
>Q0INC5:RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 - Oryza sativa subsp. japonica| (Rice) Length = 802 Score = 32.3 bits (72), Expect = 9.7 Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 6/230 (2%) Frame = +2 Query: 1640 KASAKLALLHSMLKVLHSDGHRVLIFSQMTKLLDILEDYLTLEFGPKAFERVDGSVSVAE 1819 +A+ + LL LK +V+IFS L+ L G KA E + G+++ A+ Sbjct: 423 EANQEAVLLALCLKTFKD---KVIIFSGTKHSAHRLKIIFGLS-GMKAAE-LHGNLTQAQ 477 Query: 1820 RQAAITRFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1999 R A+ F + + F L++T GI++ TVI + + + + R R G+ Sbjct: 478 RLEALELFKKQEVDF--LIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGR 535 Query: 2000 SNRLLVY-----RLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELF 2164 + + R +++A ++ QL K +++ ++ ++ +E+ED I +E Sbjct: 536 EGYAVTFVTDDDRSLLKAIAKKAGSQL-KSRIVAEKPVAECAKLIEELEDQISTIIQE-- 592 Query: 2165 RNNDEVNGKDNDEASDAKHDVS-DIEVKHRRKTGGLGDVYEDKCIGSSTK 2311 + + K EA+ A++ ++ E+ R K E K + + K Sbjct: 593 EREERILRKAEMEATKAENMIAHKDEIYSRPKRTWFATEKEKKLLAKAAK 642 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 438,160,231 Number of extensions: 9645998 Number of successful extensions: 27190 Number of sequences better than 10.0: 221 Number of HSP's gapped: 26475 Number of HSP's successfully gapped: 342 Length of query: 831 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 709 Effective length of database: 67,222,449 Effective search space: 47660716341 Effective search space used: 47660716341 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
