| Clone Name | FLbaf21g11 |
|---|---|
| Clone Library Name | barley_pub |
>Q6T4R5:NHS_HUMAN Nance-Horan syndrome protein - Homo sapiens (Human)| Length = 1630 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 151 MASPATPTKSTGAQEEAAARQSLIGISQSSPAAGEALSA 267 + +PA T+ + A +S GI +++PAAGEA SA Sbjct: 74 LPAPADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSA 112
>P09603:CSF1_HUMAN Macrophage colony-stimulating factor 1 precursor - Homo sapiens| (Human) Length = 554 Score = 31.2 bits (69), Expect = 2.7 Identities = 22/55 (40%), Positives = 26/55 (47%) Frame = -2 Query: 392 CGHGVAWRASGDWLEMDMSIDLYLSAAPLSSCPCSVRPFGDLALRASPAAGLDWE 228 C + A +S D + LY A P SS P SV P LA +P AGL WE Sbjct: 171 CNNSFAECSSQDVVTKPDCNCLYPKAIP-SSDPASVSPHQPLAPSMAPVAGLTWE 224
>Q98987:NEUM_SERCA Neuromodulin - Serinus canaria (Canary)| Length = 241 Score = 31.2 bits (69), Expect = 2.7 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Frame = +1 Query: 157 SPATPTKSTGAQEEAAARQSLIGISQSSPAAGEALSAKSPNGRTEHGQDDSG--AADKYR 330 +PA+ T + +EE A + +PAA EA +A S + E G DS A +K Sbjct: 53 APASETDAADKKEEGPAGGAAENKESEAPAATEAAAADS--AQQEEGSKDSSAPAEEKKG 110 Query: 331 SMLMSISNQSPEARQATPCPHS 396 ++ P + ATP S Sbjct: 111 DGAADTGSEQPAPQAATPAASS 132
>Q8PK58:RLUB_XANAC Ribosomal large subunit pseudouridine synthase B - Xanthomonas| axonopodis pv. citri Length = 550 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +3 Query: 150 YGLARDADEV---HRRPGGSRGPPVAHRDLPVQPGGG-RGP 260 YG AR A PGG+RGP A+R P PGGG RGP Sbjct: 481 YGAARPAGRPSGGRPGPGGNRGPASANRG-PGGPGGGARGP 520
>Q3TYD6:LMTK2_MOUSE Serine/threonine-protein kinase LMTK2 precursor - Mus musculus| (Mouse) Length = 1471 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Frame = +1 Query: 136 DIYIYMASPATPTKSTG--AQEEAAARQSLIGISQSSPAAGEALSAKSPNGRTEHG--QD 303 D+ +Y+ TPTK G E S S SSP G ++++S G D Sbjct: 1330 DVTVYLFDQETPTKELGHCGGEAHGPGPSSPAASSSSPYLGRCMNSESSTDEEGGGFEWD 1389 Query: 304 DSGAADKYRSMLMSISNQSPE---ARQATPCPHSNAA 405 D + D + S S+ P ++ +P P + +A Sbjct: 1390 DDFSPDPFMSKTTSLLGSKPSLQTSKYFSPPPPARSA 1426
>Q7SCN0:FKBP4_NEUCR FK506-binding protein 4 - Neurospora crassa| Length = 467 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = +1 Query: 160 PATPTKSTGAQEEAAARQSLIGISQSSPAAGEALSAKSPNGRTEHGQDDSGAADKYRS 333 P+ P+KS A++EAA ++ + + S E + PNG+ G+ + +D+ S Sbjct: 98 PSDPSKSKKAKQEAAIKKLMAATQEES---DEEMEDAKPNGKKGKGKGKASESDEEES 152
>Q6P5B0:RRP12_MOUSE RRP12-like protein - Mus musculus (Mouse)| Length = 1295 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 6/43 (13%) Frame = +3 Query: 156 LARDADEVHRRPGGSR------GPPVAHRDLPVQPGGGRGPER 266 LAR + GG P VAHR L QPG GRG +R Sbjct: 1099 LARQRSRAWLKEGGGDEPLNFLDPKVAHRVLATQPGPGRGKKR 1141
>O60732:MAGC1_HUMAN Melanoma-associated antigen C1 - Homo sapiens (Human)| Length = 1142 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = +1 Query: 166 TPTKSTGAQEEAAARQSLIGISQSSPAAGEALSAKSPNGRTEHGQD-----DSGAADKYR 330 +P + + E QS + SQSSP ++LS + G+D + A+ + Sbjct: 78 SPLQIPQSSPEGDDTQSPLQNSQSSPEGKDSLSPLEISQSPPEGEDVQSPLQNPASSFFS 137 Query: 331 SMLMSISNQSPEARQA 378 S L+SI SPE+ Q+ Sbjct: 138 SALLSIFQSSPESTQS 153
>Q6IN36:WIPF1_RAT WAS/WASL-interacting protein family member 1 - Rattus norvegicus| (Rat) Length = 487 Score = 29.6 bits (65), Expect = 7.8 Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -3 Query: 283 VRSATWRSGPLPPP------GWTGRSR*ATGGPRLPPGRRWTSSASRARP 152 VR RSGPLPPP G T R+ AT P+LP S S RP Sbjct: 353 VRDPPGRSGPLPPPPPINRNGSTARALPAT--PQLPSRSGMDSPRSGPRP 400
>Q8K1I7:WIPF1_MOUSE WAS/WASL-interacting protein family member 1 - Mus musculus (Mouse)| Length = 493 Score = 29.6 bits (65), Expect = 7.8 Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -3 Query: 283 VRSATWRSGPLPPP------GWTGRSR*ATGGPRLPPGRRWTSSASRARP 152 VR RSGPLPPP G T R+ AT P+LP S S RP Sbjct: 359 VRDPPGRSGPLPPPPPINRNGSTARALPAT--PQLPSRSGMDSPRSGPRP 406
>Q8XWQ8:AMPA_RALSO Probable cytosol aminopeptidase - Ralstonia solanacearum| (Pseudomonas solanacearum) Length = 506 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -2 Query: 266 ALRASPAAGLDWEIPMSDWRAAASSWAPVDFVGVAGEAIYIYISSHREQAERR 108 AL + AA + W + R ++WA + V + EA Y +I H E +R Sbjct: 107 ALSGTKAANVTWTLTQQPARDKDAAWAVLTAVTLIREAGYRFIERHPELKSKR 159
>Q9NRK6:ABCBA_HUMAN ATP-binding cassette sub-family B member 10, mitochondrial| precursor - Homo sapiens (Human) Length = 738 Score = 29.6 bits (65), Expect = 7.8 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -3 Query: 268 WRSGPLPPPGWTGRSR*ATGGPRLPPGRR 182 WR GP PPG GR R A G LP R+ Sbjct: 133 WRRGPAAPPGDKGRLRPAAAG--LPEARK 159
>Q6ZQ03:FNBP4_MOUSE Formin-binding protein 4 - Mus musculus (Mouse)| Length = 1031 Score = 29.6 bits (65), Expect = 7.9 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Frame = +1 Query: 145 IYMASPATPTKSTGAQE-----EAAARQSLIGISQSSPAAGEALSAKSPNGRTEHGQDDS 309 I SP P ST ++ + A + SQS+PAA A +A SP +DS Sbjct: 15 ILQLSPPGPRSSTPGRDPDPDPDPEADSTAAATSQSAPAAATAAAATSPAVPASAAPEDS 74 Query: 310 GAADKYRSMLMSISNQSPEARQATPCP 390 + D+ ++ + P Q P P Sbjct: 75 PSEDEQEVVV-----EVPNVVQNPPTP 96 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 90,603,596 Number of extensions: 1902173 Number of successful extensions: 5944 Number of sequences better than 10.0: 13 Number of HSP's gapped: 5935 Number of HSP's successfully gapped: 13 Length of query: 191 Length of database: 100,686,439 Length adjustment: 107 Effective length of query: 84 Effective length of database: 71,336,874 Effective search space: 5992297416 Effective search space used: 5992297416 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)