>P29126:XYNA_RUMFL Bifunctional endo-1,4-beta-xylanase xylA precursor - Ruminococcus|
           flavefaciens
          Length = 954
 Score = 34.3 bits (77), Expect = 0.65
 Identities = 27/122 (22%), Positives = 39/122 (31%)
 Frame = +1

Query: 52  LLRFCIHTTGYSCNNGEMLPTARLLVGVSSAGGLCDVPP*RPSRAAGLRWEDQ*KNTPTT 231
           L    ++  GY  N    + +  +  G SS  G          +     W  Q  N    
Sbjct: 215 LYEVSLNIEGYRSNGSANVKSVSVTQGGSSDNG---------GQQQNNDWNQQ-NNNQQQ 264

Query: 232 TTKYHYWDQQQCQIREWQHYIWERQHCRLWGQQ*YFWEQQHSHLWEQQCHS*HQPCRNWE 411
              ++ W QQ     +W +   +      WGQQ   W Q     W  Q    +    NW 
Sbjct: 265 NNDWNNWGQQNNDWNQWNNQGQQNNDWNNWGQQNNDWNQ-----WNNQGQQQNNDWNNWG 319

Query: 412 QQ 417
           QQ
Sbjct: 320 QQ 321

>Q8TC56:FA71B_HUMAN Protein FAM71B - Homo sapiens (Human)|
          Length = 605

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 201 GRSIEEHSNNNNQIPLLGPTTVSDQGVATLYLGAATLSSLGTTIIFLGATTQS 359
           G +I+    N +   + G   +S +G++   +GAA+ S  GT+    GA + S
Sbjct: 315 GAAIKNPGENESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLS 367

>P14248:RPB1_PLAFD DNA-directed RNA polymerase II subunit RPB1 - Plasmodium falciparum|
            (isolate CDC / Honduras)
          Length = 2452

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 20/106 (18%), Positives = 48/106 (45%)
 Frame = -3

Query: 565  TYELHHGSRNQSTGRSLASYDFVVAGHDLVAP*YNIIVPSYPIVIAGYSIVAPSYDMVGV 386
            TY  ++   + ++ ++      V + +++++P Y++  P Y      YS  +P Y     
Sbjct: 2257 TYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSP 2316

Query: 385  NYDIVAPRGDCVVAPRNIIVVPRDDSVAAPRYNVATP*SDTVVGPS 248
             Y   +P+     +P+     P+  S  +P+Y+  +P +  +  P+
Sbjct: 2317 KYSPTSPKYS-PTSPKYSPTSPK-YSPTSPKYSPTSPVAQNIASPN 2360


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 140,389,693
Number of extensions: 3065457
Number of successful extensions: 7456
Number of sequences better than 10.0: 3
Number of HSP's gapped: 7334
Number of HSP's successfully gapped: 3
Length of query: 285
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 173
Effective length of database: 69,965,399
Effective search space: 12104014027
Effective search space used: 12104014027
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)