ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf18e17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os12g29340:12012.t02643:unspliced-genomic expressed protein 81 3e-25
2LOC_Os09g07380:12009.t00534:unspliced-genomic ABI3-interacti... 39 0.045
3LOC_Os04g44280:12004.t03968:unspliced-genomic OsRR5 - Rice t... 36 0.31
4LOC_Os03g45920:12003.t03964:unspliced-genomic tubulin beta-8... 35 0.42
5LOC_Os02g32040:12002.t02847:unspliced-genomic AP2 domain con... 35 0.42
6LOC_Os02g01960:12002.t00096:unspliced-genomic kinesin light ... 35 0.79
7LOC_Os05g49540:12005.t04387:unspliced-genomic retrotransposo... 34 1.1
8LOC_Os09g20270:12009.t01761:unspliced-genomic hypothetical p... 34 1.5
9LOC_Os01g41680:12001.t03689:unspliced-genomic hypothetical p... 34 1.5
10LOC_Os12g08260:12012.t00708:unspliced-genomic pyruvate dehyd... 33 2.1
11LOC_Os01g53370:12001.t04758:unspliced-genomic anthocyanidin ... 30 2.7
12LOC_Os12g16640:12012.t01517:unspliced-genomic conserved hypo... 33 2.8
13LOC_Os07g30670:12007.t02754:unspliced-genomic electron carri... 31 3.0
14LOC_Os11g17360:12011.t01514:unspliced-genomic hypothetical p... 32 3.9
15LOC_Os09g22320:12009.t01965:unspliced-genomic retrotransposo... 32 3.9
16LOC_Os06g11520:12006.t01029:unspliced-genomic LMBR1-like con... 32 3.9
17LOC_Os05g50140:12005.t04446:unspliced-genomic auxin efflux c... 32 3.9
18LOC_Os10g06090:12010.t00479:unspliced-genomic OsWAK104 - OsW... 30 4.4
19LOC_Os03g49720:12003.t04320:unspliced-genomic structural mol... 27 5.0
20LOC_Os02g38120:12002.t03450:unspliced-genomic photoreceptor-... 25 5.0
21LOC_Os12g03240:12012.t00217:unspliced-genomic antiporter/ dr... 32 5.3
22LOC_Os11g03484:12011.t00238:unspliced-genomic transparent te... 32 5.3
23LOC_Os03g25830:12003.t02277:unspliced-genomic conserved hypo... 32 5.3
24LOC_Os12g41100:12012.t03787:unspliced-genomic transposon pro... 31 7.3
25LOC_Os12g21680:12012.t01908:unspliced-genomic retrotransposo... 31 7.3
26LOC_Os08g33140:12008.t03057:unspliced-genomic F-box domain c... 31 7.3
27LOC_Os07g09840:12007.t00858:unspliced-genomic hypothetical p... 31 7.3
28LOC_Os06g45080:12006.t04195:unspliced-genomic expressed protein 31 7.3
29LOC_Os03g53390:12003.t04658:unspliced-genomic expressed protein 31 7.3
30LOC_Os02g42230:12002.t03810:unspliced-genomic replication fa... 31 7.3
31LOC_Os01g66100:12001.t05971:unspliced-genomic gibberellin 20... 31 7.3
32LOC_Os01g40310:12001.t03556:unspliced-genomic expressed protein 31 7.3
33LOC_Os02g56260:12002.t05199:unspliced-genomic expressed protein 24 8.9
34LOC_Os01g47100:12001.t04159:unspliced-genomic 3-5 exonucleas... 27 9.2
35LOC_Os12g29610:12012.t02670:unspliced-genomic conserved hypo... 26 9.5
36LOC_Os05g45170:12005.t04005:unspliced-genomic expressed protein 24 9.8

>LOC_Os12g29340:12012.t02643:unspliced-genomic expressed protein|
          Length = 7686
 Score = 81.3 bits (171), Expect(4) = 3e-25
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +3 / +2

                                                     
Query: 114 DKSAGGG*AERLPGAVVEADQAHHHPQEQRQETPKAPLAERS 239
           D  AGGG AERLPG  +EADQAHHHPQEQRQE P+APLA +S
Sbjct: 158 DAGAGGGEAERLPGTALEADQAHHHPQEQRQEAPQAPLAGKS 283



 Score = 41.8 bits (85), Expect(4) = 3e-25
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2 / +1

                                              
Query: 29  QKRKEEASEGQNH*WRAVGCPAARPRSGRQERWRW 133
           + +  E   G+   WR   C AA  RSGR+ RWRW
Sbjct: 73  ESKNTEERAGRRGRWREAACSAAPARSGRRGRWRW 177



 Score = 35.4 bits (71), Expect(4) = 3e-25
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2 / +3

                                             
Query: 230  RTKQL*GLVLKQNHRQLQTRLPHLRNSSSLHSQ 328
            R +QL*GLV+KQN R+ Q + PH    ++  SQ
Sbjct: 6765 RMRQL*GLVVKQNRRRRQHQTPHRPLGNNSRSQ 6863



 Score = 24.9 bits (48), Expect(4) = 3e-25
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1 / +3

                           
Query: 430  SLSCQKFEQLHACTH 474
            +L   + EQ+HACTH
Sbjct: 6951 ALLLHQLEQVHACTH 6995



 Score = 57.0 bits (118), Expect(5) = 6e-21
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = -3 / -2

                                              
Query: 174 DPLPQQPRGVVPLNHLQRSCRPERGRAAGQPTARH 70
           DPLP+Q RGVVPL+HLQR  RPER  AA    +RH
Sbjct: 218 DPLPEQSRGVVPLHHLQRPRRPERAGAAEHAASRH 114



 Score = 38.2 bits (77), Expect(5) = 6e-21
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1 / -1

                                 
Query: 329  VDYANYCCFSDVAAVFEVDDD 267
            +D+  YCCF +  AVF+VDDD
Sbjct: 6870 IDFGIYCCFPEADAVFDVDDD 6808



 Score = 37.7 bits (76), Expect(5) = 6e-21
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -2 / -1

                       
Query: 208 SWRCSCGWW*A* 173
           SWRCSCGWW*A*
Sbjct: 252 SWRCSCGWW*A* 217



 Score = 28.6 bits (56), Expect(5) = 6e-21
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -1 / -1

                           
Query: 275  DDDSA*VQALITASF 231
            DDDSA  QALITASF
Sbjct: 6810 DDDSASPQALITASF 6766



 Score = 26.3 bits (51), Expect(5) = 6e-21
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1 / -3

                          
Query: 473  CVHACNCSNF*QDK 432
            CVHAC CS+ * +K
Sbjct: 6994 CVHACTCSS**SNK 6953



 Score = 48.7 bits (100), Expect(3) = 3e-09
 Identities = 21/25 (84%), Positives = 22/25 (88%)
 Frame = -1 / -3

                                    
Query: 179 SLIRFHNSPGESFRLTTSSALVAQN 105
           SLIRF +SPGESFR TTSSA VAQN
Sbjct: 223 SLIRFQSSPGESFRFTTSSARVAQN 149



 Score = 35.4 bits (71), Expect(3) = 3e-09
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3 / -3

                                    
Query: 300  RCGSRV*S*R*FCLSTSPYNCFVL 229
            RCG   *  R FC +TSPYNC +L
Sbjct: 6835 RCGV*C*RRRRFCFTTSPYNCLIL 6764



 Score = 23.1 bits (44), Expect(3) = 3e-09
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2 / -1

                             
Query: 484  KKVDAYMHAIVQTSDKT 434
            K++D YMH +V   + T
Sbjct: 7005 KRLDVYMHVLVPVDEVT 6955



 Score = 59.7 bits (124), Expect(2) = 1e-08
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +1 / +3

                                  
Query: 106 FWATRALEVVKRNDSPGLLWKRI 174
           FWATRALEVVKRNDSPGLLWKRI
Sbjct: 150 FWATRALEVVKRNDSPGLLWKRI 218



 Score = 24.4 bits (47), Expect(2) = 1e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1 / +2

                      
Query: 226  WQNEAVIRAC 255
            +QNEAVIRAC
Sbjct: 6761 FQNEAVIRAC 6790



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>LOC_Os09g07380:12009.t00534:unspliced-genomic ABI3-interacting protein 2, putative, expressed|
          Length = 5582

 Score = 38.6 bits (78), Expect = 0.045
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2 / +2

                                        
Query: 29  QKRKEEASEGQNH*WRAVGCPAARPRSGR 115
           +KRKEE S GQNH   A GCP   P +GR
Sbjct: 35  KKRKEEISAGQNHCVLA*GCPHPIPSAGR 121



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>LOC_Os04g44280:12004.t03968:unspliced-genomic OsRR5 - Rice type-A response regulator, expressed|
          Length = 1220

 Score = 35.9 bits (72), Expect = 0.31
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -3 / -2

                             
Query: 123 RSCRPERGRAAGQPTARH 70
           RSCRP RGRAA +P+ RH
Sbjct: 148 RSCRPPRGRAARRPSRRH 95



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>LOC_Os03g45920:12003.t03964:unspliced-genomic tubulin beta-8 chain, putative, expressed|
          Length = 4020

 Score = 35.4 bits (71), Expect = 0.42
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1 / -3

                                                 
Query: 418  HIRFSLSCQKFEQLHACTHRLSSLRGYHSLPPWASLP 528
            H R   S Q+   L +CTH+++    Y+ LPP+ + P
Sbjct: 2695 HARPRASSQRVAHLESCTHKIACHSRYYILPPYQNKP 2585



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>LOC_Os02g32040:12002.t02847:unspliced-genomic AP2 domain containing protein|
          Length = 720

 Score = 35.4 bits (71), Expect = 0.42
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +2 / -3

                                                      
Query: 2   RRRRNPQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERWR 130
           RR R+P S++ R  +   G+    RA   PAAR RSG + R R
Sbjct: 505 RRTRHPHSDRHRHRKPFPGRRRRVRAEPAPAARRRSGCRRRRR 377



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>LOC_Os02g01960:12002.t00096:unspliced-genomic kinesin light chain, putative, expressed|
          Length = 3274

 Score = 34.5 bits (69), Expect = 0.79
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2 / -2

                                                    
Query: 2   RRRRNPQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQER 124
           RRRR P   Q+R++       H WR VG   AR    R+ R
Sbjct: 147 RRRRRPAPGQRRRQPPRRRGRHRWRVVGRGEARHGRVRRAR 25



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>LOC_Os05g49540:12005.t04387:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 13511

 Score = 34.1 bits (68), Expect = 1.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3 / +2

                                                   
Query: 576  FTVSFLFCLTVVHYFILETKWAPFVMRLFLRFLKMSGKK 692
            F  SFL C  ++H++++   + PF + +    L+M G K
Sbjct: 9368 FCFSFLCCTLIIHFYLIYIFFYPFFLSIIRTSLRMVGVK 9484



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>LOC_Os09g20270:12009.t01761:unspliced-genomic hypothetical protein|
          Length = 3112

 Score = 33.6 bits (67), Expect = 1.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1 / +2

                                  
Query: 499  HSLPPWASLPHPAYVSL*HHFP 564
            H+L  W +LPH +   L*HHFP
Sbjct: 1715 HTLDWWPTLPHVSEQEL*HHFP 1780



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>LOC_Os01g41680:12001.t03689:unspliced-genomic hypothetical protein|
          Length = 1375

 Score = 33.6 bits (67), Expect = 1.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2 / +2

                                                   
Query: 14  NPQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERWRW 133
           N    +   E+  EG +     +G P  R R GRQ  W W
Sbjct: 440 NSGRGEHADEDDGEGYDRAGDTMGSPGGRTRQGRQRLWEW 559



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>LOC_Os12g08260:12012.t00708:unspliced-genomic pyruvate dehydrogenase E1 component, alpha subunit, putative,|
            expressed
          Length = 4327

 Score = 33.1 bits (66), Expect = 2.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3 / +1

                                      
Query: 573  FMKWEVMLQAYVSRMGQRCPWRQGMI 496
            F  WE+     +S  G R PWR+G++
Sbjct: 1927 FFPWEIQFFLTISTAGNRFPWRKGLL 2004



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>LOC_Os01g53370:12001.t04758:unspliced-genomic anthocyanidin 5,3-O-glucosyltransferase, putative, expressed|
          Length = 1993

 Score = 29.9 bits (59), Expect(2) = 2.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3 / -3

                            
Query: 150  PGAVVEADQAHHHPQE 197
            PG V+EA +A HHPQE
Sbjct: 1082 PGNVLEARRATHHPQE 1035



 Score = 23.5 bits (45), Expect(2) = 2.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1 / -1

                                      
Query: 430 SLSCQKFEQLHACTHRLSSLRGYHSLP 510
           SL C   +  H+    LSS RG+ S P
Sbjct: 940 SLGCASSQARHSWRSALSSSRGFISGP 860



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>LOC_Os12g16640:12012.t01517:unspliced-genomic conserved hypothetical protein|
          Length = 997

 Score = 32.7 bits (65), Expect = 2.8
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -3 / -2

                                             
Query: 174 DPLPQQPRGVVPLNHLQRSCRPERGRAAGQPTAR 73
           DPLP +P  V P +HL R C    GR  G  T R
Sbjct: 852 DPLPLRPALVNPSSHLLRHCCHAPGRRRG*GTPR 751



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>LOC_Os07g30670:12007.t02754:unspliced-genomic electron carrier/ electron transporter/ iron ion binding protein,|
           putative, expressed
          Length = 1628

 Score = 31.3 bits (62), Expect(2) = 3.0
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3 / +3

                                          
Query: 150 PGAVVEADQAHHHPQEQRQETPKAPLAERSS 242
           P A +     HHH Q QRQET    L  R S
Sbjct: 147 PRATLRRGHGHHHQQLQRQETELQLLRRRPS 239



 Score = 21.7 bits (41), Expect(2) = 3.0
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +1 / +2

                                              
Query: 487 LRGYHSLPPWASLPHPAYVSL*HHFPLHESSLFLF 591
           L+  +  PP   L         HH P H+ S  +F
Sbjct: 848 LKAVNCFPPKLMLRRNC*KGFVHHLPPHDKSQTVF 952



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>LOC_Os11g17360:12011.t01514:unspliced-genomic hypothetical protein|
          Length = 1131

 Score = 32.2 bits (64), Expect = 3.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3 / +2

                                               
Query: 189 PQEQRQETPKAPLAERSSYKGLYSSRIIVNFKHGCH 296
           P      T ++P    S    L SS II+ + HGCH
Sbjct: 29  PSSSPAPTVRSPTTVASLQSALVSSSIIIVYPHGCH 136



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>LOC_Os09g22320:12009.t01965:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6176

 Score = 32.2 bits (64), Expect = 3.9
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3 / -3

                                                               
Query: 138  AERLPGAVVEADQAHHHPQEQRQETPKAPLAERSSYKGLYSSRIIVNFKHG 290
            + R+  A V + + + HP +     P  PL +  S++    SR   NF+HG
Sbjct: 6060 SSRVSRADVSSRRLYRHPPKSPFGRPSKPLRKAGSFQASPLSRARKNFQHG 5908



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>LOC_Os06g11520:12006.t01029:unspliced-genomic LMBR1-like conserved region family protein, expressed|
          Length = 6857

 Score = 32.2 bits (64), Expect = 3.9
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3 / -3

                                      
Query: 126 GGG*AERLPGAVVEADQAHHHPQEQRQ 206
           GG   ER  GA   A + HHHP  QRQ
Sbjct: 105 GGEDVERHGGAREVAQRRHHHPHRQRQ 25



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>LOC_Os05g50140:12005.t04446:unspliced-genomic auxin efflux carrier component 3b, putative, expressed|
          Length = 2868

 Score = 32.2 bits (64), Expect = 3.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2 / -1

                            
Query: 83  GCPAARPRSGRQERWRW 133
           GCP A PR GR+ R RW
Sbjct: 693 GCPRATPRPGRRARRRW 643



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>LOC_Os10g06090:12010.t00479:unspliced-genomic OsWAK104 - OsWAK receptor-like protein kinase|
          Length = 6850

 Score = 30.4 bits (60), Expect(2) = 4.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3 / +3

                                      
Query: 429  KTYMEGYCFRLQHVMQVQRPSLNCIS 352
            K Y    CFR  H+M +  P   C+S
Sbjct: 4227 KVYFRSLCFRSWHIMSIFTPLFFCVS 4304



 Score = 24.0 bits (46), Expect(2) = 4.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1 / +1

                                 
Query: 368  LLTAYQFLHHKP*VDYANYCC 306
            L+  Y    HKP + + + CC
Sbjct: 5677 LMRTYDLCRHKPGIFFPDSCC 5739



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>LOC_Os03g49720:12003.t04320:unspliced-genomic structural molecule, putative, expressed|
          Length = 2946

 Score = 26.7 bits (52), Expect(2) = 5.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3 / +1

                                            
Query: 126 GGG*AERLPGAVVEADQAHHHPQEQRQETPKAP 224
           GG     LPGAV+  +Q    P+E  +   +AP
Sbjct: 232 GGRVVLLLPGAVLRGEQGEGEPREGGEAQGRAP 330



 Score = 22.1 bits (42), Expect(2) = 5.0
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2 / +2

                                                     
Query: 8   RRNPQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERWRW 133
           R  P ++      AS   +     +   AA+P SGR+   RW
Sbjct: 104 RAEPDASSSFHPPASSSSSPRGGRLALAAAQPGSGRRWVGRW 229



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>LOC_Os02g38120:12002.t03450:unspliced-genomic photoreceptor-interacting protein-like, putative, expressed|
          Length = 2847

 Score = 24.9 bits (48), Expect(2) = 5.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3 / -2

                          
Query: 159  VVEADQAHHHPQEQ 200
            V+E +  HHHPQ +
Sbjct: 2150 VLEEEHLHHHPQRE 2109



 Score = 24.0 bits (46), Expect(2) = 5.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2 / -1

                       
Query: 86   CPAARPRSGRQ 118
            CPAARPR  R+
Sbjct: 2205 CPAARPRRARR 2173



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>LOC_Os12g03240:12012.t00217:unspliced-genomic antiporter/ drug transporter/ transporter, putative|
          Length = 440

 Score = 31.8 bits (63), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1 / -3

                                   
Query: 529 HPAYVSL*HHFPLHESSLFLFCFV 600
           HP  + L HH P H S+L L C +
Sbjct: 153 HPQLLVLLHHSPPHRSNLILLCII 82



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>LOC_Os11g03484:12011.t00238:unspliced-genomic transparent testa 12 protein, putative, expressed|
          Length = 9864

 Score = 31.8 bits (63), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1 / -3

                                   
Query: 529 HPAYVSL*HHFPLHESSLFLFCFV 600
           HP  + L HH P H S+L L C +
Sbjct: 265 HPQLLVLLHHSPPHRSNLILLCII 194



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>LOC_Os03g25830:12003.t02277:unspliced-genomic conserved hypothetical protein|
          Length = 270

 Score = 31.8 bits (63), Expect = 5.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2 / -3

                              
Query: 71  WRAVGCPAARPRSGRQERW 127
           WR  GCP+ARPR     R+
Sbjct: 85  WRTAGCPSARPRRSGSARY 29



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>LOC_Os12g41100:12012.t03787:unspliced-genomic transposon protein, putative, unclassified|
          Length = 1360

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 19/56 (33%), Positives = 21/56 (37%)
 Frame = +1 / +1

                                                                   
Query: 367 RWALNLHNMLKPKTISFHIRFSLSCQKFEQLHACTHRLSSLRGYHSLPPWASLPHP 534
           RW LNL  M     I     F + C   E     T R  S     +LPP   LP P
Sbjct: 739 RWYLNLMKMKMEMKIEIKSLFGVRCCHSEH*SRKTERSISA*PGFTLPPGPGLPRP 906



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>LOC_Os12g21680:12012.t01908:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2889

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2 / -1

                                                  
Query: 20   QSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERWRW 133
            QS QKR+    EG     +A+ C  ARP  G Q+  +W
Sbjct: 1512 QSVQKRRVLVCEGSL*SMKAIRCKRARPGRGGQDVTKW 1399



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>LOC_Os08g33140:12008.t03057:unspliced-genomic F-box domain containing protein, expressed|
          Length = 5138

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2 / +1

                              
Query: 578  HCFFFVLFDSSTLLYSRN 631
            HCF ++L D+S+LLY  N
Sbjct: 3868 HCFSYLLIDNSSLLYGHN 3921



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>LOC_Os07g09840:12007.t00858:unspliced-genomic hypothetical protein|
          Length = 1203

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2 / -2

                         
Query: 92  AARPRSGRQERWRW 133
           AARPR GR  RWRW
Sbjct: 761 AARPRLGRCPRWRW 720



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>LOC_Os06g45080:12006.t04195:unspliced-genomic expressed protein|
          Length = 4602

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2 / -2

                                                
Query: 17  PQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERW 127
           P  + KRK E + G NH    VG  A+  R+ R E W
Sbjct: 194 PNKSGKRKHEKAAGANHQLGWVGRSASTRRAKRGEDW 84



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>LOC_Os03g53390:12003.t04658:unspliced-genomic expressed protein|
          Length = 3634

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1 / +3

                                    
Query: 403 KTISFHIRFSLSCQKFEQLHACTHR 477
           KTI  H  F+ +C+   Q+H C HR
Sbjct: 549 KTIQTHP*FARTCRTHAQVHGCVHR 623



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>LOC_Os02g42230:12002.t03810:unspliced-genomic replication factor A, putative, expressed|
          Length = 3956

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1 / +3

                                      
Query: 415  FHIRFSLSCQKFEQLHACTHRLSSLR 492
            F + F +SCQ + QL  C   LSSLR
Sbjct: 2238 FMLLFMVSCQAYNQLQ*CNTSLSSLR 2315



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>LOC_Os01g66100:12001.t05971:unspliced-genomic gibberellin 20 oxidase 2, putative, expressed|
          Length = 3123

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2 / +3

                                    
Query: 700  FFFFFPDIFKNLRNNLITNGAHLV 629
            FF F+P++ KNL   +I N +HLV
Sbjct: 1371 FF*FYPNLLKNLATFIIPN*SHLV 1442



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>LOC_Os01g40310:12001.t03556:unspliced-genomic expressed protein|
          Length = 979

 Score = 31.3 bits (62), Expect = 7.3
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2 / -1

                                                      
Query: 2   RRRRNPQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERWR 130
           RRR  P + + R+     G+   WR  G  A R R  R  R R
Sbjct: 718 RRRGRPGARRGRRSRRGRGRRRRWRRRGAGARRRRGRRGRRRR 590



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>LOC_Os02g56260:12002.t05199:unspliced-genomic expressed protein|
          Length = 3624

 Score = 24.4 bits (47), Expect(2) = 8.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3 / -1

                             
Query: 138 AERLPGAVVEADQAHHHP 191
           A RLP A+  AD+   HP
Sbjct: 99  APRLPAALAAADELAQHP 46



 Score = 23.5 bits (45), Expect(2) = 8.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2 / -3

                                                      
Query: 2   RRRRNPQSNQKRKEEASEGQNH*WRAVGCPAARPRSGRQERWR 130
           RRR  P +       AS  ++  WR      +  R GR  RWR
Sbjct: 286 RRRAAP*AASSAARCASPTRSPAWRGGPRRGSCSRVGRWRRWR 158



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>LOC_Os01g47100:12001.t04159:unspliced-genomic 3-5 exonuclease family protein, expressed|
          Length = 1074

 Score = 27.2 bits (53), Expect(2) = 9.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2 / +2

                                  
Query: 518  HLCPIRLT*ACSITSHFMKVHC 583
            H CP+RL   CS+ + +  + C
Sbjct: 1007 HTCPMRLAGGCSLVNLYWPLRC 1072



 Score = 23.5 bits (45), Expect(2) = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2 / +3

                     
Query: 104 RSGRQERWRW 133
           RS R+ RWRW
Sbjct: 78  RSKRRRRWRW 107



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>LOC_Os12g29610:12012.t02670:unspliced-genomic conserved hypothetical protein|
          Length = 4319

 Score = 26.3 bits (51), Expect(2) = 9.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2 / -1

                              
Query: 71   WRAVGCPAARPRSGRQER 124
            WR  GCP +R  + R  R
Sbjct: 4304 WRRTGCPPSRSTASRSSR 4251



 Score = 26.3 bits (51), Expect(2) = 9.5
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1 / -1

                            
Query: 379  NLHNMLKPKTISFHIR 426
            ++HN+L+PKT  F+I+
Sbjct: 1214 SVHNLLRPKTHQFNIK 1167



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>LOC_Os05g45170:12005.t04005:unspliced-genomic expressed protein|
          Length = 971

 Score = 24.0 bits (46), Expect(2) = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2 / -1

                                 
Query: 2   RRRRNPQSNQKRKEEASEGQNH 67
           RRR NP+  + R  EA    NH
Sbjct: 503 RRRENPRRRRVRLREAWSRGNH 438



 Score = 24.0 bits (46), Expect(2) = 9.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2 / -1

                          
Query: 89  PAARPRSGRQERWRW 133
           P  R    R+ RWRW
Sbjct: 407 PGTRGGGSRRRRWRW 363


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 262,241,134
Number of extensions: 4104810
Number of successful extensions: 20971
Number of sequences better than 10.0: 36
Length of query: 233
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 184
Effective length of database: 52,856,264
Effective search space: 9725552576
Effective search space used: 9725552576
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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