ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf18d16 |
|---|---|
| Clone Library Name | barley_pub |
>Q53NI2:NADK2_ORYSJ Probable NAD kinase 2, chloroplast precursor - Oryza sativa subsp.| japonica (Rice) Length = 981 Score = 993 bits (2566), Expect = 0.0 Identities = 499/633 (78%), Positives = 557/633 (87%), Gaps = 5/633 (0%) Frame = +1 Query: 88 NSHTRDLSQLLWVGPVPGDIAEIEAYCRIFRAAEQLQNAVMSALCDPETGECPVRYDVPS 267 N HTRDLSQLLWVGPVPGDIAEIEAYCRIFRAAEQL AVMSALCDPETGECPVRYDV + Sbjct: 63 NYHTRDLSQLLWVGPVPGDIAEIEAYCRIFRAAEQLHTAVMSALCDPETGECPVRYDVQT 122 Query: 268 EDLPVLEDKVAAVLGCMLALLNRGRTEVLAGRSGVASAFQGSEHSTMDRIPPLALFRGDM 447 EDLPVLEDKVAAVLGCMLALLNRGR EVL+GRSGVASAFQGSE STMD+IPPLALFRGD+ Sbjct: 123 EDLPVLEDKVAAVLGCMLALLNRGRKEVLSGRSGVASAFQGSEDSTMDKIPPLALFRGDL 182 Query: 448 KRCCESMQVALASYLVPNEARGLDIWMRLQRLKHACYDAGFARVDGHPCPTLFANWFPVY 627 KRCCESMQVALASYLVP+EARGLDIW +LQRLK+ACYDAGF R DGHPCPTLFANWFPVY Sbjct: 183 KRCCESMQVALASYLVPSEARGLDIWRKLQRLKNACYDAGFPRADGHPCPTLFANWFPVY 242 Query: 628 FSTVPDDPATEELEVAFWRGGQVSEEGLEWLLAKGFRTIVDLREEDVKDDLYLSAVGKAV 807 FSTVPDD ++ELEVAFWRGGQVSEEGLEWLL KGF+TIVDLREEDVKDDLYLSA+ +AV Sbjct: 243 FSTVPDDSLSDELEVAFWRGGQVSEEGLEWLLLKGFKTIVDLREEDVKDDLYLSAIHEAV 302 Query: 808 SSGKIEVVNMPVEIGTAPSAEQVQQFAALVSDGTKKPIYLHSKEGISRTSAMVSRWKQYA 987 S GKIEVVN+PVEIGTAPSAEQVQ+FA +VSD KKPIYLHS+EGISRTSAMVSRWKQY Sbjct: 303 SLGKIEVVNLPVEIGTAPSAEQVQRFAEIVSDSAKKPIYLHSQEGISRTSAMVSRWKQYV 362 Query: 988 TRAERLATKKRSPIVNGKALKND----LTNGPGFSSSGSENGAIVKSDRTVDAGEARDID 1155 TRAERLAT+ RS NGK ++ND LTN PGFSS GSENG ++SDRT++ GE DID Sbjct: 363 TRAERLATQNRSLNGNGKHVRNDQTEQLTNSPGFSSEGSENGTPLESDRTME-GETCDID 421 Query: 1156 IEITSNNLEVTNSLPNDQSTEQGEMHDSRTELLSDFKLETSPLKAQFPTCNVFSRKEMTK 1335 IE +NLE+TNSLP++QSTEQGE+H +RTEL S+F+LE++PLKAQFP+C+VFS+K MT Sbjct: 422 IETARHNLEITNSLPSEQSTEQGELHGTRTELQSNFRLESNPLKAQFPSCDVFSKKGMTD 481 Query: 1336 FFRSKRVYPKSVLNXXXXXXXXXXXXXKQNLRAEHNEAIDCEAADMMVLKNANGTLFDND 1515 FFRSK+VYPKSVLN KQ+L AE N AID EAA+ VLK++NG FDND Sbjct: 482 FFRSKKVYPKSVLNPRRRSNSLLVSRRKQSLSAEQNGAIDYEAAEFKVLKSSNGASFDND 541 Query: 1516 YILSVSSGITNGKPSNNGTSTSLEEKESTASLLTIDPKTSNASNPNGNAQLGSQKPSEKN 1695 YILSV+SGITNGKPSNNG STS+E++E S++T+DP+TS+ SN NGNA LGSQK +E+N Sbjct: 542 YILSVASGITNGKPSNNGASTSVEDREMETSVVTVDPRTSDTSNSNGNAPLGSQKSAERN 601 Query: 1696 GGPYLERYPSDTIDGSICAT-TGVVRVQSRRKAEMFLVRTDGFSCTREKVTESSLAFTHP 1872 G Y+ER SD +DG++CA+ TGVVR+QSRRKAEMFLVRTDGFSCTREKVTESSLAFTHP Sbjct: 602 GSLYVEREKSDHVDGNMCASATGVVRLQSRRKAEMFLVRTDGFSCTREKVTESSLAFTHP 661 Query: 1873 STQQQMLMWKSPPKTVLLLKKLGDELMEEAKEV 1971 STQQQMLMWKSPPKTVLLLKKLGDELMEEAKEV Sbjct: 662 STQQQMLMWKSPPKTVLLLKKLGDELMEEAKEV 694
>Q9C5W3:NADK2_ARATH NAD kinase 2, chloroplast precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 985 Score = 545 bits (1404), Expect = e-154 Identities = 302/639 (47%), Positives = 401/639 (62%), Gaps = 15/639 (2%) Frame = +1 Query: 97 TRDLSQLLWVGPVPGDIAEIEAYCRIFRAAEQLQNAVMSALCDPETGECPVRYDVPSEDL 276 +RD S L W+GPVPGDIAE+EAYCRIFR+AE+L A+M LC+P TGEC V YD E+ Sbjct: 81 SRDTSNLPWIGPVPGDIAEVEAYCRIFRSAERLHGALMETLCNPVTGECRVPYDFSPEEK 140 Query: 277 PVLEDKVAAVLGCMLALLNRGRTEVLAGRSGVASAFQGSEHSTMDR-IPPLALFRGDMKR 453 P+LEDK+ +VLGC+L+LLN+GR E+L+GRS ++F + + +PPLA+FRG+MKR Sbjct: 141 PLLEDKIVSVLGCILSLLNKGRKEILSGRSSSMNSFNLDDVGVAEESLPPLAVFRGEMKR 200 Query: 454 CCESMQVALASYLVPNEARGLDIWMRLQRLKHACYDAGFARVDGHPCPTLFANWFPVYFS 633 CCES+ +AL +YL P++ R +W +LQ+LK+ CYDAGF R D +PC TLFANW P+Y S Sbjct: 201 CCESLHIALENYLTPDDERSGIVWRKLQKLKNVCYDAGFPRSDNYPCQTLFANWDPIYSS 260 Query: 634 TVPDDPATEELEVAFWRGGQVSEEGLEWLLAKGFRTIVDLREEDVKDDLYLSAVGKAVSS 813 +D + E E+AFWRGGQV++EGL+WL+ GF+TIVDLR E VKD Y +A+ A+S Sbjct: 261 NTKEDIDSYESEIAFWRGGQVTQEGLKWLIENGFKTIVDLRAEIVKDTFYQTALDDAISL 320 Query: 814 GKIEVVNMPVEIGTAPSAEQVQQFAALVSDGTKKPIYLHSKEGISRTSAMVSRWKQYATR 993 GKI VV +P+++ AP AEQV+ FA++VSD +K+PIY+HSKEG+ RTSAMVSRWKQY TR Sbjct: 321 GKITVVQIPIDVRMAPKAEQVELFASIVSDSSKRPIYVHSKEGVWRTSAMVSRWKQYMTR 380 Query: 994 AERLATKKRSPIVNGKALKNDLTNGPGFSSSGSENGAIVKSDRTVDAGEARDIDIEITSN 1173 K P+ + K + S+ +G V ++T E ++D S+ Sbjct: 381 ----PITKEIPV--SEESKRREVSETKLGSNAVVSGKGVPDEQTDKVSEINEVDSRSASS 434 Query: 1174 NLEVTNSLPNDQSTEQGEMHDSRTELLSDFKLETSPLKAQFPTCNVFSRKEMTKFFRSKR 1353 QS E G + S+F + + PLK+Q P N+FSRKEM+KF +SK Sbjct: 435 -----------QSKESGRFEGDTS--ASEFNMVSDPLKSQVPPGNIFSRKEMSKFLKSKS 481 Query: 1354 VYPKSVL-NXXXXXXXXXXXXXKQNLRAEHNEAIDCEAADMMV-LKNANGTLFDNDYILS 1527 + P L N N+ +D ++ + N+NGTL S Sbjct: 482 IAPAGYLTNPSKILGTVPTPQFSYTGVTNGNQIVDKDSIRRLAETGNSNGTLLPTS---S 538 Query: 1528 VSSGITNGKPSNNGTSTSLEEKES---------TASLLTIDPKTSNASNPNGNAQLGSQK 1680 S NGK SN S +S +A+ + + P + N S G+ + + Sbjct: 539 QSLDFGNGKFSNGNVHASDNTNKSISDNRGNGFSAAPIAV-PPSDNLSRAVGSHSVRESQ 597 Query: 1681 PSEKNGGPYLERYPSD--TIDGSICAT-TGVVRVQSRRKAEMFLVRTDGFSCTREKVTES 1851 N G + + I+G++CA+ TGVVRVQSR+KAEMFLVRTDG SCTREKVTES Sbjct: 598 TQRNNSGSSSDSSDDEAGAIEGNMCASATGVVRVQSRKKAEMFLVRTDGVSCTREKVTES 657 Query: 1852 SLAFTHPSTQQQMLMWKSPPKTVLLLKKLGDELMEEAKE 1968 SLAFTHPSTQQQML+WK+ PKTVLLLKKLG ELMEEAKE Sbjct: 658 SLAFTHPSTQQQMLLWKTTPKTVLLLKKLGQELMEEAKE 696
>Q8DR59:PBPA_STRR6 Penicillin-binding protein 1A - Streptococcus pneumoniae (strain ATCC| BAA-255 / R6) Length = 719 Score = 36.2 bits (82), Expect = 0.56 Identities = 20/68 (29%), Positives = 30/68 (44%) Frame = +1 Query: 1501 LFDNDYILSVSSGITNGKPSNNGTSTSLEEKESTASLLTIDPKTSNASNPNGNAQLGSQK 1680 +F N + SS PS +S+S + S +S T S +NPN N Q + Sbjct: 647 VFKNGARSTWSSPAPQQPPSTESSSSSSDSSTSQSSSTTPSTNNSTTTNPNNNTQQSNTT 706 Query: 1681 PSEKNGGP 1704 P ++N P Sbjct: 707 PDQQNQNP 714
>Q59801:HYSA_STAA8 Hyaluronate lyase precursor - Staphylococcus aureus (strain NCTC| 8325) Length = 807 Score = 35.8 bits (81), Expect = 0.73 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = +1 Query: 1510 NDYILSVSSGITNGKPSNNGTSTSLEEKESTASLLTIDPKTSNASNPNGNAQLGSQKPSE 1689 ND I+ + +GI + S N +T K + +L T D +T+N+ N N+ ++ Sbjct: 572 NDKIVFLGTGIKSTDSSKNPVTTIENRKANGYTLYTDDKQTTNSDNQENNSVFLESTDTK 631 Query: 1690 KNGGPYLERYPSDTI 1734 KN G + P T+ Sbjct: 632 KNIGYHFLNKPKITV 646
>O96615:SER2_GALME Sericin-2 - Galleria mellonella (Wax moth)| Length = 220 Score = 35.4 bits (80), Expect = 0.95 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 7/143 (4%) Frame = +1 Query: 1486 NANGTLFDNDYILSVSSGITNGKPSNNGTSTSLEEKESTASLLTIDPKTSNASNPNGNAQ 1665 N++G+ N+ S SS T+G NN + +S S+ S + S++SN +G++ Sbjct: 24 NSSGSSSTNNASGSSSSNNTSGSSRNNSSGSSSSNNSSSGSSAG-NSSGSSSSNSSGSSG 82 Query: 1666 LG-------SQKPSEKNGGPYLERYPSDTIDGSICATTGVVRVQSRRKAEMFLVRTDGFS 1824 +G S S+ G R +D S A+ S +E + DG Sbjct: 83 IGSLSRNSSSSSSSQAAGSSSSRRVSADGSSSSSSASNSAAAQNSASSSE--TINADG-- 138 Query: 1825 CTREKVTESSLAFTHPSTQQQML 1893 E + SS A + +T+ Q++ Sbjct: 139 SENESSSSSSSAAQNSATRSQVI 161
>Q04707:PBPA_STRPN Penicillin-binding protein 1A - Streptococcus pneumoniae| Length = 719 Score = 35.0 bits (79), Expect = 1.2 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +1 Query: 1555 PSNNGTSTSLEEKESTASLLTIDPKTSNASNPNGNAQLGSQKPSEKNGGP 1704 PS +S+S + S +S T S +NPN N Q + P ++N P Sbjct: 665 PSTESSSSSSDSSTSQSSSTTPSTNNSTTTNPNNNTQQSNTTPDQQNQNP 714
>Q3MAQ7:SYP_ANAVT Prolyl-tRNA synthetase - Anabaena variabilis (strain ATCC 29413 /| PCC 7937) Length = 604 Score = 34.7 bits (78), Expect = 1.6 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 12/105 (11%) Frame = +1 Query: 553 CYDAGFARV-----------DGHPCPTLFANWFPVYFSTVPDDPATEELEVAFWRGGQVS 699 CY G +R+ DG P A + + T+P+ +++E+A +++ Sbjct: 471 CYGVGVSRLAQSAVEQSYDKDGIIWPVAIAPYHAIV--TIPNINDAQQVEIAERLYTELN 528 Query: 700 EEGLEWLLA-KGFRTIVDLREEDVKDDLYLSAVGKAVSSGKIEVV 831 + G+E LL + R V ++ D+ Y G+A+++GK+E+V Sbjct: 529 QSGVETLLDDRNERAGVKFKDADLIGIPYRIVTGRAITNGKVEIV 573
>Q8YM83:SYP_ANASP Prolyl-tRNA synthetase - Anabaena sp. (strain PCC 7120)| Length = 604 Score = 34.7 bits (78), Expect = 1.6 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 12/105 (11%) Frame = +1 Query: 553 CYDAGFARV-----------DGHPCPTLFANWFPVYFSTVPDDPATEELEVAFWRGGQVS 699 CY G +R+ DG P A + + T+P+ +++E+A +++ Sbjct: 471 CYGVGVSRLAQSAVEQSYDKDGIIWPVAIAPYHAIV--TIPNINDAQQVEIAEKLYTELN 528 Query: 700 EEGLEWLLA-KGFRTIVDLREEDVKDDLYLSAVGKAVSSGKIEVV 831 + G+E LL + R V ++ D+ Y G+A+++GK+E+V Sbjct: 529 QSGVETLLDDRNERAGVKFKDADLIGIPYRIVTGRAITNGKVEIV 573
>Q9FWA4:GLTR_ARATH Probable glycosyltransferase At3g02350 - Arabidopsis thaliana| (Mouse-ear cress) Length = 561 Score = 33.5 bits (75), Expect = 3.6 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +1 Query: 778 LYLSAVGKAVSSGKIEVVNMPVEIGTAPS---AEQVQQFAALVSDGTKKPIYLHSKEGIS 948 L+L+ ++S + + P + T PS A + F AL SD K + L K+ I Sbjct: 37 LFLATFSVVLNSSR----HQPHQDHTLPSMGNAYMQRTFLALQSDPLKTRLDLIHKQAID 92 Query: 949 RTSAMVSRWKQYATRAERLATKKRSPIVNGKALKNDLTNGPGFSSSGSENGAIVKSD 1119 + +V+ + YA + + A+K+ + +DL + PG S+ S+NG ++ D Sbjct: 93 HLT-LVNAYAAYARKLKLDASKQLKLFEDLAINFSDLQSKPGLKSAVSDNGNALEED 148
>P36286:POLN_SMSV1 Non-structural polyprotein [Contains: Unknown protein; Helicase - San| Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1) Length = 1879 Score = 33.1 bits (74), Expect = 4.7 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 8/154 (5%) Frame = +1 Query: 1531 SSGITNGKPSNNGTSTSLEEKESTASLLTIDPKTSNASNPNGNAQLGS--QKPSEKNGGP 1704 +S N S +GT S ++ E+T + L++ T + + L + +K E P Sbjct: 163 TSRAINDDGSTDGTIPSWDQIETTPAFLSLLSNTDEEMSADELTNLAAHLRKAFETGSHP 222 Query: 1705 YLERYPSDTIDGSICATTGVVRVQSRRKAEMFLVRTDGFSCTREKVTE------SSLAFT 1866 Y D + G + + R+ + R + REK+ S + T Sbjct: 223 PNVDYSKDQLQGLLEMAEAALPPARRQTLPFYQQRLEARRTWREKIFNLPLDELSKILTT 282 Query: 1867 HPSTQQQMLMWKSPPKTVLLLKKLGDELMEEAKE 1968 Q+ WK + +L K+ G+E A+E Sbjct: 283 SKDRFQRCAAWKVVLEKAVLAKEYGEEAYAYAQE 316
>Q8BN57:CC033_MOUSE Uncharacterized protein C3orf33 homolog - Mus musculus (Mouse)| Length = 294 Score = 33.1 bits (74), Expect = 4.7 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 1834 EKVTESSLAFTH-PSTQQQMLMWKSPPKTVLLLKKLGDELMEEAK 1965 +++TE L H P T + WK P+ VLL+K G EL E K Sbjct: 84 QRITECGLEIEHIPITLPFISSWKEEPRGVLLVKLAGVELTESGK 128
>Q8THA5:LEU12_METAC 2-isopropylmalate synthase 2 - Methanosarcina acetivorans| Length = 515 Score = 32.7 bits (73), Expect = 6.2 Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 3/96 (3%) Frame = +1 Query: 691 QVSEEGLEWLLAKGFRTIVDLREEDVKDDLYLSAVGKAVSSGKIEVVNMPVEIGT-APSA 867 Q++ E ++++ G + + + D YL V KAV +++N+P +G PSA Sbjct: 131 QLAVEAVQYIKDHGLKCMFSAMDATRTDPAYLIEVFKAVQEAGCDIINVPDTVGVMVPSA 190 Query: 868 --EQVQQFAALVSDGTKKPIYLHSKEGISRTSAMVS 969 Q++ AA ++ ++ H+ G++ +++++ Sbjct: 191 MYRQIKDIAAEIT--IPIDVHCHNDFGLAVANSLMA 224
>O30020:LEU12_ARCFU 2-isopropylmalate synthase 2 - Archaeoglobus fulgidus| Length = 503 Score = 32.7 bits (73), Expect = 6.2 Identities = 19/78 (24%), Positives = 40/78 (51%) Frame = +1 Query: 697 SEEGLEWLLAKGFRTIVDLREEDVKDDLYLSAVGKAVSSGKIEVVNMPVEIGTAPSAEQV 876 S E +E++ + G + + + + YL + KAV + K+++VN+P +G A + + Sbjct: 121 SVECVEYIKSHGVKCMFSAMDATRTEVEYLKQIFKAVENAKVDIVNVPDTVGVA-TPFKF 179 Query: 877 QQFAALVSDGTKKPIYLH 930 + + + K PI +H Sbjct: 180 YELIKQLREHLKVPIDVH 197 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 389,512,713 Number of extensions: 8846575 Number of successful extensions: 25142 Number of sequences better than 10.0: 13 Number of HSP's gapped: 25057 Number of HSP's successfully gapped: 13 Length of query: 704 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 584 Effective length of database: 67,771,039 Effective search space: 39578286776 Effective search space used: 39578286776 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
