| Clone Name | FLbaf21e24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT835935.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA224E05, full insert sequence Length = 2732 Score = 202 bits (102), Expect = 3e-48 Identities = 252/302 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 |||||||||||||| |||||||||||| || ||||| ||||||||||| || || ||| Sbjct: 1756 atgaaggagcttgggctcaagagggctaagcattttggatggccaaacacctacgttttc 1815 Query: 891 accaaggcaatgggcgagatgatgatggggctcctaccactcgattttccggttgtcatc 950 |||||||||||||| |||||| || |||||| ||| | || ||||||| || ||| Sbjct: 1816 accaaggcaatgggggagatgctgctggggcacctccgcggggaccttccggtggtgatc 1875 Query: 951 atccgcccgagcattataactagtaccctcaaggagccattgccaggatggatggaagga 1010 ||||| |||||||| ||||| || | |||||||||||||||||| ||||||||||||||| Sbjct: 1876 atccggccgagcatcataaccagcatcctcaaggagccattgcccggatggatggaagga 1935 Query: 1011 atcaagacaatcgactcagtggtcatcgggtacgcgaagcagacgttgcccttcttccta 1070 |||| ||| |||||||| ||| |||| || ||||| |||||||| || |||||||||| Sbjct: 1936 atcaggacgatcgactcggtgatcataggttacgccaagcagaccctgtccttcttcctc 1995 Query: 1071 gtcgacctagatttaataatggatgtgattccaggggacatggtggtgaatgctatgatg 1130 |||||||| | | |||||||| ||||| || ||||||||||||||||| || |||||| Sbjct: 1996 gtcgacctcaacctcataatggacgtgataccgggggacatggtggtgaacgcgatgatg 2055 Query: 1131 gt 1132 || Sbjct: 2056 gt 2057 Score = 131 bits (66), Expect = 1e-26 Identities = 165/198 (83%) Strand = Plus / Plus Query: 519 atcatcgtcaatggagcagcgactacaaatttctttgaaagatatgatgtggctttcgat 578 |||||||||||||| || |||||||||||||| | ||||||||||||||||||||| || Sbjct: 1441 atcatcgtcaatggtgctgcgactacaaatttttatgaaagatatgatgtggcttttgac 1500 Query: 579 gcaaatgtcttgggagtgaagcacatttgcgcatttgcaatgaaatgttctaagctcaag 638 | ||||||||||||| ||| |||| || | |||||| | ||| ||| | || || ||| Sbjct: 1501 tcgaatgtcttgggagctaagaacatctgtgaatttgcgaagaagtgtacaaaactgaag 1560 Query: 639 atgttgcttcatgtttcaacagcctacatagctggtgaacaagagggaataatactagag 698 ||| ||||||||||||| || ||||| | ||||| |||||||||||| | ||||||||| Sbjct: 1561 atgctgcttcatgtttcgactgcctatgtcgctggagaacaagagggactgatactagag 1620 Query: 699 aagccgatcttgatgggt 716 || || ||||||||||| Sbjct: 1621 aaaccattcttgatgggt 1638 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgta 263 |||||||||| ||| ||||| ||||| |||||||| || ||||| || ||||| || || Sbjct: 160 ttcaggggcaggagcatcctgatcaccggttcaaccgggttccttggcaaagtgcttgtg 219 Query: 264 gagaagatactgagggttcaacctgatgtgaagaagctct 303 ||||||||||| |||||||| || ||||| |||||||||| Sbjct: 220 gagaagatactcagggttcagccagatgtcaagaagctct 259 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1339 acatggccatcaagtacatgcttcccctcgagatgtttcgcctagttaacattgcacttt 1398 ||||||||||||| |||| ||||||||||||||| |||| || || |||||||| || | Sbjct: 2255 acatggccatcaactacaagcttcccctcgagatccttcggctggtgaacattgcgctct 2314 Query: 1399 gtgg 1402 |||| Sbjct: 2315 gtgg 2318 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1470 tacgcaccatacaccttgttcaaaggatgctttgatgacat 1510 ||||| || ||||||||||||||||| ||||| || ||||| Sbjct: 2386 tacgcgccctacaccttgttcaaaggctgcttcgacgacat 2426 Score = 42.1 bits (21), Expect = 6.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1575 tttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccct 1634 ||||||||||| ||||||| ||||| ||||| | |||||||||| || |||||||| Sbjct: 2491 tttgattttgaccccaagtcgattgattgggatgagtatttctacaaggttcacatcccc 2550 Query: 1635 ggtgt 1639 ||||| Sbjct: 2551 ggtgt 2555
>dbj|AK242888.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090079L06, full insert sequence Length = 1751 Score = 202 bits (102), Expect = 3e-48 Identities = 252/302 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 |||||||||||||| |||||||||||| || ||||| ||||||||||| || || ||| Sbjct: 792 atgaaggagcttgggctcaagagggctaagcattttggatggccaaacacctacgttttc 851 Query: 891 accaaggcaatgggcgagatgatgatggggctcctaccactcgattttccggttgtcatc 950 |||||||||||||| |||||| || |||||| ||| | || ||||||| || ||| Sbjct: 852 accaaggcaatgggggagatgctgctggggcacctccgcggggaccttccggtggtgatc 911 Query: 951 atccgcccgagcattataactagtaccctcaaggagccattgccaggatggatggaagga 1010 ||||| |||||||| ||||| || | |||||||||||||||||| ||||||||||||||| Sbjct: 912 atccggccgagcatcataaccagcatcctcaaggagccattgcccggatggatggaagga 971 Query: 1011 atcaagacaatcgactcagtggtcatcgggtacgcgaagcagacgttgcccttcttccta 1070 |||| ||| |||||||| ||| |||| || ||||| |||||||| || |||||||||| Sbjct: 972 atcaggacgatcgactcggtgatcataggttacgccaagcagacactgtccttcttcctc 1031 Query: 1071 gtcgacctagatttaataatggatgtgattccaggggacatggtggtgaatgctatgatg 1130 |||||||| | | |||||||| ||||| || ||||||||||||||||| || |||||| Sbjct: 1032 gtcgacctcaacctcataatggacgtgataccgggggacatggtggtgaacgcgatgatg 1091 Query: 1131 gt 1132 || Sbjct: 1092 gt 1093 Score = 131 bits (66), Expect = 1e-26 Identities = 165/198 (83%) Strand = Plus / Plus Query: 519 atcatcgtcaatggagcagcgactacaaatttctttgaaagatatgatgtggctttcgat 578 |||||||||||||| || |||||||||||||| | ||||||||||||||||||||| || Sbjct: 477 atcatcgtcaatggtgctgcgactacaaatttttatgaaagatatgatgtggcttttgac 536 Query: 579 gcaaatgtcttgggagtgaagcacatttgcgcatttgcaatgaaatgttctaagctcaag 638 | ||||||||||||| ||| |||| || | |||||| | ||| ||| | || || ||| Sbjct: 537 tcgaatgtcttgggagctaagaacatctgtgaatttgcgaagaagtgtacaaaactgaag 596 Query: 639 atgttgcttcatgtttcaacagcctacatagctggtgaacaagagggaataatactagag 698 ||| ||||||||||||| || ||||| | ||||| |||||||||||| | ||||||||| Sbjct: 597 atgctgcttcatgtttcgactgcctatgtcgctggagaacaagagggactgatactagag 656 Query: 699 aagccgatcttgatgggt 716 || || ||||||||||| Sbjct: 657 aaaccattcttgatgggt 674 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgta 263 |||||||||| ||| ||||| ||||| |||||||| || ||||| || ||||| || || Sbjct: 162 ttcaggggcaggagcatcctgatcaccggttcaaccgggttccttggcaaagtgcttgtg 221 Query: 264 gagaagatactgagggttcaacctgatgtgaagaagctct 303 ||||||||||| |||||||| || ||||| |||||||||| Sbjct: 222 gagaagatactcagggttcagccagatgtcaagaagctct 261 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1339 acatggccatcaagtacatgcttcccctcgagatgtttcgcctagttaacattgcacttt 1398 ||||||||||||| |||| ||||||||||||||| |||| || || |||||||| || | Sbjct: 1291 acatggccatcaactacaagcttcccctcgagatccttcggctggtgaacattgcgctct 1350 Query: 1399 gtgg 1402 |||| Sbjct: 1351 gtgg 1354 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1575 tttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccct 1634 ||||||||||| ||||||| ||||| ||||| | |||||||||| ||||||||||| Sbjct: 1527 tttgattttgaccccaagtcgattgattgggatgagtatttctacaaggtccacatcccc 1586 Query: 1635 ggtgt 1639 ||||| Sbjct: 1587 ggtgt 1591 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1470 tacgcaccatacaccttgttcaaaggatgctttgatgacat 1510 ||||| || ||||||||||||||||| ||||| || ||||| Sbjct: 1422 tacgcgccctacaccttgttcaaaggctgcttcgacgacat 1462
>ref|NM_001068017.1| Oryza sativa (japonica cultivar-group) Os08g0298700 (Os08g0298700) mRNA, complete cds Length = 2892 Score = 159 bits (80), Expect = 4e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 937 ttccggttgtcatcatccgcccgagcattataactagtaccctcaaggagccattgccag 996 ||||||| || |||||||| |||||||| ||||| || | |||||||||||||||||| | Sbjct: 38 ttccggtggtgatcatccggccgagcatcataaccagcatcctcaaggagccattgcccg 97 Query: 997 gatggatggaaggaatcaagacaatcgactcagtggtcatcgggtacgcgaagcagacgt 1056 |||||||||||||||||| ||| |||||||| ||| |||| || ||||| |||||||| Sbjct: 98 gatggatggaaggaatcaggacgatcgactcggtgatcataggttacgccaagcagacac 157 Query: 1057 tgcccttcttcctagtcgacctagatttaataatggatgtgattccaggggacatggtgg 1116 || |||||||||| |||||||| | | |||||||| ||||| || ||||||||||||| Sbjct: 158 tgtccttcttcctcgtcgacctcaacctcataatggacgtgataccgggggacatggtgg 217 Query: 1117 tgaatgctatgatggt 1132 |||| || |||||||| Sbjct: 218 tgaacgcgatgatggt 233 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1339 acatggccatcaagtacatgcttcccctcgagatgtttcgcctagttaacattgcacttt 1398 ||||||||||||| |||| ||||||||||||||| |||| || || |||||||| || | Sbjct: 431 acatggccatcaactacaagcttcccctcgagatccttcggctggtgaacattgcgctct 490 Query: 1399 gtgg 1402 |||| Sbjct: 491 gtgg 494
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 109 bits (55), Expect = 3e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 864 tttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatgatgatggggctc 923 ||||| ||||||||||| || || ||||||||||||||||| |||||| || |||||| | Sbjct: 12110594 tttggatggccaaacacctacgttttcaccaaggcaatgggggagatgctgctggggcac 12110653 Query: 924 ctaccactcgattttccggttgtcatcatccgcccgagcattataactagtaccctcaag 983 || | || ||||||| || |||||||| |||||||| ||||| || | ||||||| Sbjct: 12110654 ctccgcggggaccttccggtggtgatcatccggccgagcatcataaccagcatcctcaag 12110713 Query: 984 gagccattgccaggatggatggaaggaatca 1014 ||||||||||| ||||||||||||||||||| Sbjct: 12110714 gagccattgcccggatggatggaaggaatca 12110744 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 ||||||||||| || ||| ||||| || ||||| |||||| | ||||| || |||||| Sbjct: 27913591 atgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttc 27913650 Query: 891 accaaggcaatgggcgagatg 911 |||||||| |||||||||||| Sbjct: 27913651 accaaggccatgggcgagatg 27913671 Score = 52.0 bits (26), Expect = 0.007 Identities = 80/98 (81%) Strand = Plus / Plus Query: 558 agatatgatgtggctttcgatgcaaatgtcttgggagtgaagcacatttgcgcatttgca 617 ||||||||||||||||| || | ||||||||||||| ||| |||| || | |||||| Sbjct: 12110001 agatatgatgtggcttttgactcgaatgtcttgggagctaagaacatctgtgaatttgcg 12110060 Query: 618 atgaaatgttctaagctcaagatgttgcttcatgtttc 655 | ||| ||| | || || |||||| ||||||||||||| Sbjct: 12110061 aagaagtgtacaaaactgaagatgctgcttcatgtttc 12110098 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 519 atcatcgtcaatggagcagcgactacaaatttctttgaaag 559 |||||||||||||| || |||||||||||||| | |||||| Sbjct: 12109885 atcatcgtcaatggtgctgcgactacaaatttttatgaaag 12109925 Score = 50.1 bits (25), Expect = 0.028 Identities = 52/61 (85%) Strand = Plus / Plus Query: 656 aacagcctacatagctggtgaacaagagggaataatactagagaagccgatcttgatggg 715 ||||||||| | ||||| |||||||||||| | ||||||||||| || |||||||||| Sbjct: 12110179 aacagcctatgtcgctggagaacaagagggactgatactagagaaaccattcttgatggg 12110238 Query: 716 t 716 | Sbjct: 12110239 t 12110239 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1575 tttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccct 1634 ||||||||||| ||||||| ||||| ||||| | |||||||||| ||||||||||| Sbjct: 12113871 tttgattttgaccccaagtcgattgattgggatgagtatttctacaaggtccacatcccc 12113930 Query: 1635 ggtgt 1639 ||||| Sbjct: 12113931 ggtgt 12113935 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggctt 244 |||| ||||||||| |||||||||||||| |||||||||| Sbjct: 27909339 ttcaagggcaagagcatcctcatcactggagcaactggctt 27909379 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Plus Query: 264 gagaagatactgagggttcaacctgatgtgaagaagctct 303 ||||||||||| |||||||| || ||||| |||||||||| Sbjct: 12108664 gagaagatactcagggttcagccagatgtcaagaagctct 12108703 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1339 acatggccatcaagtacatgcttcccctcgag 1370 ||||||||||||| |||| ||||||||||||| Sbjct: 12111973 acatggccatcaactacaagcttcccctcgag 12112004 Score = 48.1 bits (24), Expect = 0.11 Identities = 33/36 (91%) Strand = Plus / Plus Query: 264 gagaagatactgagggttcaacctgatgtgaagaag 299 ||||||||||||||||| || |||||||| |||||| Sbjct: 27909550 gagaagatactgagggtgcagcctgatgtcaagaag 27909585 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1104 ggggacatggtggtgaatgctatgatggt 1132 ||||||||||||||||| || |||||||| Sbjct: 12111747 ggggacatggtggtgaacgcgatgatggt 12111775 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1033 tcatcgggtacgcgaagcaga 1053 ||||||||||||||||||||| Sbjct: 27913826 tcatcgggtacgcgaagcaga 27913846
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 109 bits (55), Expect = 3e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 864 tttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatgatgatggggctc 923 ||||| ||||||||||| || || ||||||||||||||||| |||||| || |||||| | Sbjct: 162089 tttggatggccaaacacctacgttttcaccaaggcaatgggggagatgctgctggggcac 162148 Query: 924 ctaccactcgattttccggttgtcatcatccgcccgagcattataactagtaccctcaag 983 || | || ||||||| || |||||||| |||||||| ||||| || | ||||||| Sbjct: 162149 ctccgcggggaccttccggtggtgatcatccggccgagcatcataaccagcatcctcaag 162208 Query: 984 gagccattgccaggatggatggaaggaatca 1014 ||||||||||| ||||||||||||||||||| Sbjct: 162209 gagccattgcccggatggatggaaggaatca 162239 Score = 52.0 bits (26), Expect = 0.007 Identities = 80/98 (81%) Strand = Plus / Plus Query: 558 agatatgatgtggctttcgatgcaaatgtcttgggagtgaagcacatttgcgcatttgca 617 ||||||||||||||||| || | ||||||||||||| ||| |||| || | |||||| Sbjct: 161496 agatatgatgtggcttttgactcgaatgtcttgggagctaagaacatctgtgaatttgcg 161555 Query: 618 atgaaatgttctaagctcaagatgttgcttcatgtttc 655 | ||| ||| | || || |||||| ||||||||||||| Sbjct: 161556 aagaagtgtacaaaactgaagatgctgcttcatgtttc 161593 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 519 atcatcgtcaatggagcagcgactacaaatttctttgaaag 559 |||||||||||||| || |||||||||||||| | |||||| Sbjct: 161380 atcatcgtcaatggtgctgcgactacaaatttttatgaaag 161420 Score = 50.1 bits (25), Expect = 0.028 Identities = 52/61 (85%) Strand = Plus / Plus Query: 656 aacagcctacatagctggtgaacaagagggaataatactagagaagccgatcttgatggg 715 ||||||||| | ||||| |||||||||||| | ||||||||||| || |||||||||| Sbjct: 161674 aacagcctatgtcgctggagaacaagagggactgatactagagaaaccattcttgatggg 161733 Query: 716 t 716 | Sbjct: 161734 t 161734 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1575 tttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccct 1634 ||||||||||| ||||||| ||||| ||||| | |||||||||| ||||||||||| Sbjct: 165366 tttgattttgaccccaagtcgattgattgggatgagtatttctacaaggtccacatcccc 165425 Query: 1635 ggtgt 1639 ||||| Sbjct: 165426 ggtgt 165430 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Plus Query: 264 gagaagatactgagggttcaacctgatgtgaagaagctct 303 ||||||||||| |||||||| || ||||| |||||||||| Sbjct: 160159 gagaagatactcagggttcagccagatgtcaagaagctct 160198 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1339 acatggccatcaagtacatgcttcccctcgag 1370 ||||||||||||| |||| ||||||||||||| Sbjct: 163468 acatggccatcaactacaagcttcccctcgag 163499 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1104 ggggacatggtggtgaatgctatgatggt 1132 ||||||||||||||||| || |||||||| Sbjct: 163242 ggggacatggtggtgaacgcgatgatggt 163270
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 109 bits (55), Expect = 3e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 864 tttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatgatgatggggctc 923 ||||| ||||||||||| || || ||||||||||||||||| |||||| || |||||| | Sbjct: 107728 tttggatggccaaacacctacgttttcaccaaggcaatgggggagatgctgctggggcac 107787 Query: 924 ctaccactcgattttccggttgtcatcatccgcccgagcattataactagtaccctcaag 983 || | || ||||||| || |||||||| |||||||| ||||| || | ||||||| Sbjct: 107788 ctccgcggggaccttccggtggtgatcatccggccgagcatcataaccagcatcctcaag 107847 Query: 984 gagccattgccaggatggatggaaggaatca 1014 ||||||||||| ||||||||||||||||||| Sbjct: 107848 gagccattgcccggatggatggaaggaatca 107878 Score = 52.0 bits (26), Expect = 0.007 Identities = 80/98 (81%) Strand = Plus / Plus Query: 558 agatatgatgtggctttcgatgcaaatgtcttgggagtgaagcacatttgcgcatttgca 617 ||||||||||||||||| || | ||||||||||||| ||| |||| || | |||||| Sbjct: 107135 agatatgatgtggcttttgactcgaatgtcttgggagctaagaacatctgtgaatttgcg 107194 Query: 618 atgaaatgttctaagctcaagatgttgcttcatgtttc 655 | ||| ||| | || || |||||| ||||||||||||| Sbjct: 107195 aagaagtgtacaaaactgaagatgctgcttcatgtttc 107232 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 519 atcatcgtcaatggagcagcgactacaaatttctttgaaag 559 |||||||||||||| || |||||||||||||| | |||||| Sbjct: 107019 atcatcgtcaatggtgctgcgactacaaatttttatgaaag 107059 Score = 50.1 bits (25), Expect = 0.028 Identities = 52/61 (85%) Strand = Plus / Plus Query: 656 aacagcctacatagctggtgaacaagagggaataatactagagaagccgatcttgatggg 715 ||||||||| | ||||| |||||||||||| | ||||||||||| || |||||||||| Sbjct: 107313 aacagcctatgtcgctggagaacaagagggactgatactagagaaaccattcttgatggg 107372 Query: 716 t 716 | Sbjct: 107373 t 107373 Score = 50.1 bits (25), Expect = 0.028 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1575 tttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccct 1634 ||||||||||| ||||||| ||||| ||||| | |||||||||| ||||||||||| Sbjct: 111005 tttgattttgaccccaagtcgattgattgggatgagtatttctacaaggtccacatcccc 111064 Query: 1635 ggtgt 1639 ||||| Sbjct: 111065 ggtgt 111069 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Plus Query: 264 gagaagatactgagggttcaacctgatgtgaagaagctct 303 ||||||||||| |||||||| || ||||| |||||||||| Sbjct: 105798 gagaagatactcagggttcagccagatgtcaagaagctct 105837 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1339 acatggccatcaagtacatgcttcccctcgag 1370 ||||||||||||| |||| ||||||||||||| Sbjct: 109107 acatggccatcaactacaagcttcccctcgag 109138 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1104 ggggacatggtggtgaatgctatgatggt 1132 ||||||||||||||||| || |||||||| Sbjct: 108881 ggggacatggtggtgaacgcgatgatggt 108909
>emb|AJ459249.1|TAE459249 Triticum aestivum mRNA for fatty acyl coA reductase (TAA1a gene) Length = 1919 Score = 95.6 bits (48), Expect = 5e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgtagagaagat 271 |||||| |||||||||||||| ||||| ||||| || ||||| |||| || |||||||| Sbjct: 117 caagagcatcctcatcactggatcaacaggctttcttggaaagatactggtggagaagat 176 Query: 272 actgagggttcaacctgatgtgaagaag 299 |||||| ||||||||||||||||||||| Sbjct: 177 actgagagttcaacctgatgtgaagaag 204 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 829 ccatgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtct 888 |||||||||| |||||||| | ||||| || ||||| ||||||||||||| || || | Sbjct: 743 ccatgaaggatcttggccttaccagggcccggcacttcaggtggccaaacacatacgtgt 802 Query: 889 tcaccaaggcaatgggcgagatg 911 |||||||| | ||||| |||||| Sbjct: 803 tcaccaagtcgatgggggagatg 825 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1089 atggatgtgattccaggggacatggtggtgaatgctatgatgg 1131 ||||||||||| || || ||||||||||||||||| ||||||| Sbjct: 1003 atggatgtgatgccgggcgacatggtggtgaatgcgatgatgg 1045
>emb|AJ459253.1|TAE459253 Triticum aestivum mRNA for fatty acyl coA reductase (TAA1c gene) Length = 1949 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgtagagaagat 271 |||||| |||||||||||||| ||||| ||||| || ||||| |||| || |||||||| Sbjct: 141 caagagcatcctcatcactggatcaacaggctttcttggaaagatactagtggagaagat 200 Query: 272 actgagggttcaacctgatgtgaagaag 299 |||||| |||||||||||||| |||||| Sbjct: 201 actgagagttcaacctgatgtaaagaag 228 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1089 atggatgtgattccaggggacatggtggtgaatgctatgatggttgccat 1138 ||||||||||| || || ||||||||||||||||| ||||||| |||||| Sbjct: 1027 atggatgtgatgccgggcgacatggtggtgaatgcgatgatggctgccat 1076 Score = 56.0 bits (28), Expect = 5e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1574 ctttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccc 1633 |||| |||| || |||||| ||||||||||||| |||| |||||||| ||||||||||| Sbjct: 1530 ctttaatttcgaccccaagaccattgactgggacgattacttctacagcgtccacatccc 1589
>emb|CT834449.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA043L09, full insert sequence Length = 474 Score = 81.8 bits (41), Expect = 8e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgtagagaagat 271 |||||| |||||||||||||| ||||| ||||| || ||||| |||| || |||||||| Sbjct: 99 caagagcatcctcatcactggatcaacaggctttcttggaaagatactggtggagaagat 158 Query: 272 actgagggttcaacctgatgt 292 |||||||||||| |||||||| Sbjct: 159 actgagggttcagcctgatgt 179
>ref|NM_001070497.1| Oryza sativa (japonica cultivar-group) Os09g0567500 (Os09g0567500) mRNA, complete cds Length = 2011 Score = 81.8 bits (41), Expect = 8e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgtagagaagat 271 |||||| |||||||||||||| ||||| ||||| || ||||| |||| || |||||||| Sbjct: 230 caagagcatcctcatcactggatcaacaggctttcttggaaagatactggtggagaagat 289 Query: 272 actgagggttcaacctgatgt 292 |||||||||||| |||||||| Sbjct: 290 actgagggttcagcctgatgt 310 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 867 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 926 Query: 912 atg 914 ||| Sbjct: 927 atg 929
>ref|NM_001068016.1| Oryza sativa (japonica cultivar-group) Os08g0298600 (Os08g0298600) mRNA, complete cds Length = 300 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgta 263 |||||||||| ||| ||||| ||||| |||||||| || ||||| || ||||| || || Sbjct: 40 ttcaggggcaggagcatcctgatcaccggttcaaccgggttccttggcaaagtgcttgtg 99 Query: 264 gagaagatactgagggttcaacctgatgtgaagaagctct 303 ||||||||||| |||||||| || ||||| |||||||||| Sbjct: 100 gagaagatactcagggttcagccagatgtcaagaagctct 139
>dbj|AK071956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084H10, full insert sequence Length = 2012 Score = 73.8 bits (37), Expect = 2e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgtagagaagat 271 |||||| |||||||||||||| || || ||||| || ||||| |||| || |||||||| Sbjct: 231 caagagcatcctcatcactggatcgacaggctttcttggaaagatactggtggagaagat 290 Query: 272 actgagggttcaacctgatgt 292 |||||||||||| |||||||| Sbjct: 291 actgagggttcagcctgatgt 311 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 868 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 927 Query: 912 atg 914 ||| Sbjct: 928 atg 930
>emb|CT832651.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130J02, full insert sequence Length = 2020 Score = 71.9 bits (36), Expect = 8e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgta 263 |||| ||||||||| |||||||||||||| |||||||||| || || || | || || Sbjct: 267 ttcaagggcaagagcatcctcatcactggagcaactggctttcttggcaagattcttgtg 326 Query: 264 gagaagatactgagggttcaacctgatgtgaagaag 299 ||||||||||||||||| || |||||||| |||||| Sbjct: 327 gagaagatactgagggtgcagcctgatgtcaagaag 362 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 ||||||||||| || ||| ||||| || ||||| |||||| | ||||| || |||||| Sbjct: 888 atgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttc 947 Query: 891 accaaggcaatgggcgagatg 911 |||||||| |||||||||||| Sbjct: 948 accaaggccatgggcgagatg 968 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1033 tcatcgggtacgcgaagcaga 1053 ||||||||||||||||||||| Sbjct: 1123 tcatcgggtacgcgaagcaga 1143 Score = 42.1 bits (21), Expect = 6.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1483 ccttgttcaaaggatgctttgatgacatgaacttgga 1519 |||| |||||||||||||| || ||||| |||||||| Sbjct: 1576 ccttcttcaaaggatgcttcgacgacataaacttgga 1612
>ref|NM_001069023.1| Oryza sativa (japonica cultivar-group) Os08g0557800 (Os08g0557800) mRNA, complete cds Length = 2020 Score = 71.9 bits (36), Expect = 8e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgta 263 |||| ||||||||| |||||||||||||| |||||||||| || || || | || || Sbjct: 269 ttcaagggcaagagcatcctcatcactggagcaactggctttcttggcaagattcttgtg 328 Query: 264 gagaagatactgagggttcaacctgatgtgaagaag 299 ||||||||||||||||| || |||||||| |||||| Sbjct: 329 gagaagatactgagggtgcagcctgatgtcaagaag 364 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 ||||||||||| || ||| ||||| || ||||| |||||| | ||||| || |||||| Sbjct: 890 atgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttc 949 Query: 891 accaaggcaatgggcgagatg 911 |||||||| |||||||||||| Sbjct: 950 accaaggccatgggcgagatg 970 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1033 tcatcgggtacgcgaagcaga 1053 ||||||||||||||||||||| Sbjct: 1125 tcatcgggtacgcgaagcaga 1145 Score = 42.1 bits (21), Expect = 6.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1483 ccttgttcaaaggatgctttgatgacatgaacttgga 1519 |||| |||||||||||||| || ||||| |||||||| Sbjct: 1578 ccttcttcaaaggatgcttcgacgacataaacttgga 1614
>dbj|AK069659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028D15, full insert sequence Length = 2022 Score = 71.9 bits (36), Expect = 8e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgta 263 |||| ||||||||| |||||||||||||| |||||||||| || || || | || || Sbjct: 270 ttcaagggcaagagcatcctcatcactggagcaactggctttcttggcaagattcttgtg 329 Query: 264 gagaagatactgagggttcaacctgatgtgaagaag 299 ||||||||||||||||| || |||||||| |||||| Sbjct: 330 gagaagatactgagggtgcagcctgatgtcaagaag 365 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 ||||||||||| || ||| ||||| || ||||| |||||| | ||||| || |||||| Sbjct: 891 atgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttc 950 Query: 891 accaaggcaatgggcgagatg 911 |||||||| |||||||||||| Sbjct: 951 accaaggccatgggcgagatg 971 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1033 tcatcgggtacgcgaagcaga 1053 ||||||||||||||||||||| Sbjct: 1126 tcatcgggtacgcgaagcaga 1146 Score = 42.1 bits (21), Expect = 6.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1483 ccttgttcaaaggatgctttgatgacatgaacttgga 1519 |||| |||||||||||||| || ||||| |||||||| Sbjct: 1578 ccttcttcaaaggatgcttcgacgacataaacttgga 1614
>emb|AJ459250.1|TAE459250 Triticum aestivum TAA1a gene for fatty acyl coA reductase Length = 2448 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 254 agtactcgtagagaagatactgagggttcaacctgatgtgaagaag 299 |||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 303 agtactggtggagaagatactgagagttcaacctgatgtgaagaag 348 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 829 ccatgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtct 888 |||||||||| |||||||| | ||||| || ||||| ||||||||||||| || || | Sbjct: 1237 ccatgaaggatcttggccttaccagggcccggcacttcaggtggccaaacacatacgtgt 1296 Query: 889 tcaccaaggcaatgggcgagatg 911 |||||||| | ||||| |||||| Sbjct: 1297 tcaccaagtcgatgggggagatg 1319 Score = 44.1 bits (22), Expect = 1.7 Identities = 37/42 (88%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaa 253 |||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 117 caagagcatcctcatcactggatcaacaggctttcttggaaa 158 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1107 gacatggtggtgaatgctatgatgg 1131 ||||||||||||||||| ||||||| Sbjct: 1782 gacatggtggtgaatgcgatgatgg 1806
>ref|NM_122147.1| Arabidopsis thaliana oxidoreductase, acting on the CH-CH group of donors (AT5G22420) mRNA, complete cds Length = 1230 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 866 tgggtggccaaacacttatgtcttcaccaaggcaatggg 904 ||||||||||||||| |||||||||||||| |||||||| Sbjct: 474 tgggtggccaaacacatatgtcttcaccaaagcaatggg 512
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 866 tgggtggccaaacacttatgtcttcaccaaggcaatggg 904 ||||||||||||||| |||||||||||||| |||||||| Sbjct: 70297 tgggtggccaaacacatatgtcttcaccaaagcaatggg 70335
>emb|AJ459254.1|TAE459254 Triticum aestivum TAA1c gene for fatty acyl coA reductase Length = 2522 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 254 agtactcgtagagaagatactgagggttcaacctgatgtgaagaag 299 |||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 331 agtactagtggagaagatactgagagttcaacctgatgtaaagaag 376 Score = 56.0 bits (28), Expect = 5e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1574 ctttgattttgatcccaagtacattgactgggacaattatttctacagtgtccacatccc 1633 |||| |||| || |||||| ||||||||||||| |||| |||||||| ||||||||||| Sbjct: 2435 ctttaatttcgaccccaagaccattgactgggacgattacttctacagcgtccacatccc 2494 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1107 gacatggtggtgaatgctatgatggttgccat 1138 ||||||||||||||||| ||||||| |||||| Sbjct: 1827 gacatggtggtgaatgcgatgatggctgccat 1858 Score = 44.1 bits (22), Expect = 1.7 Identities = 37/42 (88%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaa 253 |||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 139 caagagcatcctcatcactggatcaacaggctttcttggaaa 180
>ref|NM_119537.2| Arabidopsis thaliana oxidoreductase, acting on the CH-CH group of donors (AT4G33790) mRNA, complete cds Length = 1704 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 763 tggccaaacacatatgtgttcaccaaagcaatgggggagatgatg 807
>gb|AY070065.1| Arabidopsis thaliana putative male sterility 2 protein (At4g33790) mRNA, complete cds Length = 1626 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 762 tggccaaacacatatgtgttcaccaaagcaatgggggagatgatg 806
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 859 gacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 |||| ||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 18055010 gacaatttgggtggcccaacacgtatgtgttcacaaaggcaatgggtgagatg 18055062 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 254 agtactcgtagagaagatactgagggttcaacctgatgtgaagaag 299 |||| |||| |||||||||||||| |||| ||||||||||||||| Sbjct: 18052999 agtattcgtggagaagatactgagaattcagcctgatgtgaagaag 18053044 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1579 attttgatcccaagtacattgactggga 1606 ||||||||||||||| |||||||||||| Sbjct: 18057587 attttgatcccaagtccattgactggga 18057614
>gb|AY057657.1| Arabidopsis thaliana AT4g33790/T16L1_280 mRNA, complete cds Length = 1633 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 760 tggccaaacacatatgtgttcaccaaagcaatgggggagatgatg 804
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 39048 tggccaaacacatatgtgttcaccaaagcaatgggggagatgatg 39004
>emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L1 (ESSAII project) Length = 98124 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Minus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 86266 tggccaaacacatatgtgttcaccaaagcaatgggggagatgatg 86222
>dbj|AP005515.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0064M11 Length = 164263 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 859 gacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 |||| ||||||||||| ||||| ||||| ||||| ||||||||||| |||||| Sbjct: 133169 gacaatttgggtggcccaacacgtatgtgttcacaaaggcaatgggtgagatg 133221 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 254 agtactcgtagagaagatactgagggttcaacctgatgtgaagaag 299 |||| |||| |||||||||||||| |||| ||||||||||||||| Sbjct: 131158 agtattcgtggagaagatactgagaattcagcctgatgtgaagaag 131203 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1579 attttgatcccaagtacattgactggga 1606 ||||||||||||||| |||||||||||| Sbjct: 135746 attttgatcccaagtccattgactggga 135773
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 831 atgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtcttc 890 ||||||||||| || ||| ||||| || ||||| |||||| | ||||| || |||||| Sbjct: 121669 atgaaggagctggggctcgccagggcgcgccacttcgggtggtccaacacctacgtcttc 121728 Query: 891 accaaggcaatgggcgagatg 911 |||||||| |||||||||||| Sbjct: 121729 accaaggccatgggcgagatg 121749 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 204 ttcaggggcaagagtatcctcatcactggttcaactggctt 244 |||| ||||||||| |||||||||||||| |||||||||| Sbjct: 117417 ttcaagggcaagagcatcctcatcactggagcaactggctt 117457 Score = 48.1 bits (24), Expect = 0.11 Identities = 33/36 (91%) Strand = Plus / Plus Query: 264 gagaagatactgagggttcaacctgatgtgaagaag 299 ||||||||||||||||| || |||||||| |||||| Sbjct: 117628 gagaagatactgagggtgcagcctgatgtcaagaag 117663 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1033 tcatcgggtacgcgaagcaga 1053 ||||||||||||||||||||| Sbjct: 121904 tcatcgggtacgcgaagcaga 121924
>emb|BX827659.1|CNS0A2HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1642 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 747 tggccaaacacatatgtgttcaccaaagcaatgggggagatgatg 791
>ref|NM_112032.2| Arabidopsis thaliana MS2 (MALE STERILITY 2) (MS2) mRNA, complete cds Length = 2112 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatgatgat 916 |||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1135 acacttatgttttcaccaaagcaatgggtgagatgatgat 1174
>gb|AY288778.2| Brassica napus male sterility protein 2-1 mutant gene, complete cds Length = 2582 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatgatgat 916 |||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1625 acacttatgttttcaccaaagcaatgggagagatgatgat 1664
>gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21B14 genomic sequence, complete sequence Length = 85657 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatgatgat 916 |||||||||| |||||||| |||||||| ||||||||||| Sbjct: 66190 acacttatgttttcaccaaagcaatgggtgagatgatgat 66151
>dbj|AP002040.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEC18 Length = 80099 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatgatgat 916 |||||||||| |||||||| |||||||| ||||||||||| Sbjct: 49878 acacttatgttttcaccaaagcaatgggtgagatgatgat 49917
>emb|X73652.1|ATMS2MR A.Thaliana mRNA for male sterility 2 (MS2) protein Length = 2126 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatgatgat 916 |||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1135 acacttatgttttcaccaaagcaatgggtgagatgatgat 1174
>ref|NM_001070498.1| Oryza sativa (japonica cultivar-group) Os09g0567600 (Os09g0567600) mRNA, complete cds Length = 1859 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 970 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 911 Query: 912 atg 914 ||| Sbjct: 910 atg 908
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 254 agtactcgtagagaagatactgagggttcaacctgatgt 292 |||||| || |||||||||||||||||||| |||||||| Sbjct: 22359730 agtactggtggagaagatactgagggttcagcctgatgt 22359768 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 22362739 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 22362798 Query: 912 atg 914 ||| Sbjct: 22362799 atg 22362801 Score = 44.1 bits (22), Expect = 1.7 Identities = 37/42 (88%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaa 253 |||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 22359559 caagagcatcctcatcactggatcaacaggctttcttggaaa 22359600
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatggg 904 ||||||||||||||||||||||| ||||| ||||| Sbjct: 103051 tggccaaacacttatgtcttcacaaaggcgatggg 103085 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 87547 tggccaaacacatacgtattcaccaaggcaatgggagagatg 87588 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 864 tttgggtggccaaacacttatgtcttcaccaaggcaatggg 904 ||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 116051 tttggatggccaaacacgtatgttttcactaaggcaatggg 116091
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 254 agtactcgtagagaagatactgagggttcaacctgatgt 292 |||||| || |||||||||||||||||||| |||||||| Sbjct: 121738 agtactggtggagaagatactgagggttcagcctgatgt 121776 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 124747 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 124806 Query: 912 atg 914 ||| Sbjct: 124807 atg 124809 Score = 44.1 bits (22), Expect = 1.7 Identities = 37/42 (88%) Strand = Plus / Plus Query: 212 caagagtatcctcatcactggttcaactggcttcctaggaaa 253 |||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 121567 caagagcatcctcatcactggatcaacaggctttcttggaaa 121608
>dbj|AK106807.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C06, full insert sequence Length = 1859 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 970 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 911 Query: 912 atg 914 ||| Sbjct: 910 atg 908
>dbj|AK061142.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C05, full insert sequence Length = 1693 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 852 agggctcgacactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatg 911 ||||| || ||||| |||||||| ||||| || || ||||||||||| ||||| |||||| Sbjct: 562 agggcgcgccacttcgggtggcccaacacctacgtgttcaccaaggccatgggggagatg 621 Query: 912 atg 914 ||| Sbjct: 622 atg 624
>emb|AJ459251.1|TAE459251 Triticum aestivum mRNA for fatty acyl coA reductase (TAA1b gene) Length = 1949 Score = 52.0 bits (26), Expect = 0.007 Identities = 71/86 (82%) Strand = Plus / Plus Query: 829 ccatgaaggagcttggcctcaagagggctcgacactttgggtggccaaacacttatgtct 888 |||||||||| || ||||||| ||||| | |||||||||||||| ||||| || || | Sbjct: 750 ccatgaaggacctcggcctcaccagggccaggcactttgggtggcccaacacgtacgtgt 809 Query: 889 tcaccaaggcaatgggcgagatgatg 914 ||||||| | ||||| ||||||||| Sbjct: 810 tcaccaaatccatgggggagatgatg 835 Score = 50.1 bits (25), Expect = 0.028 Identities = 112/141 (79%) Strand = Plus / Plus Query: 991 tgccaggatggatggaaggaatcaagacaatcgactcagtggtcatcgggtacgcgaagc 1050 ||||||||||||| ||||| | || ||| |||||| || | | |||||||||||||||| Sbjct: 918 tgccaggatggatcgaaggcaccaggacgatcgacgcaatcctgatcgggtacgcgaagc 977 Query: 1051 agacgttgcccttcttcctagtcgacctagatttaataatggatgtgattccaggggaca 1110 ||| || | | |||||| | |||||| || ||| ||||| ||||| || || |||| Sbjct: 978 agagcctgtcgtgcttcctcgccgacctcgacctaaccatggacgtgatgcccggcgaca 1037 Query: 1111 tggtggtgaatgctatgatgg 1131 |||||||||| || ||||||| Sbjct: 1038 tggtggtgaacgcgatgatgg 1058 Score = 46.1 bits (23), Expect = 0.44 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1581 tttgatcccaagtacattgactgggacaattatttctacagtgtccacatccctggtgt 1639 ||||| |||||| ||||||||||||| | || |||| || ||||||||||||||||| Sbjct: 1562 tttgaccccaagaccattgactgggacgactacttcttcaaggtccacatccctggtgt 1620
>gb|AY461413.1| Hevea brasiliensis acyl CoA reductase mRNA, complete cds Length = 1365 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1083 ttaataatggatgtgattccaggggacatggtggtgaatgc 1123 ||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 681 ttaattattgatgtgataccaggtgacatggtggtgaatgc 721 Score = 46.1 bits (23), Expect = 0.44 Identities = 32/35 (91%) Strand = Plus / Plus Query: 870 tggccaaacacttatgtcttcaccaaggcaatggg 904 ||||||||||||||||| || |||||||| ||||| Sbjct: 468 tggccaaacacttatgtgtttaccaaggctatggg 502
>emb|CR936460.7| Zebrafish DNA sequence from clone DKEY-236E20 in linkage group 22, complete sequence Length = 139220 Score = 50.1 bits (25), Expect = 0.028 Identities = 25/25 (100%) Strand = Plus / Plus Query: 600 cacatttgcgcatttgcaatgaaat 624 ||||||||||||||||||||||||| Sbjct: 52839 cacatttgcgcatttgcaatgaaat 52863
>gb|AC189386.1| Brassica rapa subsp. pekinensis clone KBrB052L10, complete sequence Length = 150609 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 870 tggccaaacacttatgtcttcaccaaggcaatgggcgagatgat 913 |||||||||||||| || ||||| || |||||||| |||||||| Sbjct: 88843 tggccaaacacttacgttttcacaaaagcaatgggagagatgat 88800
>ref|NM_001059076.1| Oryza sativa (japonica cultivar-group) Os04g0354600 (Os04g0354600) mRNA, complete cds Length = 1861 Score = 46.1 bits (23), Expect = 0.44 Identities = 80/99 (80%) Strand = Plus / Plus Query: 203 tttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgt 262 |||||| | ||||| ||| |||||||| || | ||||||||||| |||||| | || || Sbjct: 87 tttcagagacaagactatactcatcaccggcgctactggcttcctgggaaaattgctggt 146 Query: 263 agagaagatactgagggttcaacctgatgtgaagaagct 301 |||||||||||| | ||||| || || |||| |||||| Sbjct: 147 ggagaagatactgcgagttcagccggaggtgaggaagct 185 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 398 tagatatcatcgtcaatggagc 419 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 633 ctcaagatgttgcttcatgtttcaacagcctacatagctggtgaacaag 681 ||||||||| ||||||||||||| || || || |||||||||| |||| Sbjct: 517 ctcaagatggtgcttcatgtttccactgcttatgtagctggtgagcaag 565
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 46.1 bits (23), Expect = 0.44 Identities = 32/35 (91%) Strand = Plus / Minus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatg 911 |||||||||| ||||| ||||| |||||||||||| Sbjct: 376832 acacttatgtgttcacaaaggccatgggcgagatg 376798
>emb|Z11889.1|MITTARRNG T.aestivum mitochondrion rrn26 gene for rRNA large subunit (26S) Length = 7242 Score = 46.1 bits (23), Expect = 0.44 Identities = 32/35 (91%) Strand = Plus / Plus Query: 877 acacttatgtcttcaccaaggcaatgggcgagatg 911 |||||||||| ||||| ||||| |||||||||||| Sbjct: 675 acacttatgtgttcacaaaggccatgggcgagatg 709
>dbj|AK065894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044F22, full insert sequence Length = 1865 Score = 46.1 bits (23), Expect = 0.44 Identities = 80/99 (80%) Strand = Plus / Plus Query: 203 tttcaggggcaagagtatcctcatcactggttcaactggcttcctaggaaaagtactcgt 262 |||||| | ||||| ||| |||||||| || | ||||||||||| |||||| | || || Sbjct: 91 tttcagagacaagactatactcatcaccggcgctactggcttcctgggaaaattgctggt 150 Query: 263 agagaagatactgagggttcaacctgatgtgaagaagct 301 |||||||||||| | ||||| || || |||| |||||| Sbjct: 151 ggagaagatactgcgagttcagccggaggtgaggaagct 189 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 402 tagatatcatcgtcaatggagc 423 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 633 ctcaagatgttgcttcatgtttcaacagcctacatagctggtgaacaag 681 ||||||||| ||||||||||||| || || || |||||||||| |||| Sbjct: 521 ctcaagatggtgcttcatgtttccactgcttatgtagctggtgagcaag 569
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 46.1 bits (23), Expect = 0.44 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1581 tttgatcccaagtacattgactgggacaattatttctacagtgtccacatccctggtgt 1639 ||||| |||||| ||||||||||||| | || |||| || ||||||||||||||||| Sbjct: 4228 tttgaccccaagaccattgactgggacgactacttcttcaaggtccacatccctggtgt 4286 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 861 cactttgggtggccaaacacttatgtcttcaccaaggcaatgggcgagatgatg 914 |||||||||||||| ||||| || || |||||||| | ||||| ||||||||| Sbjct: 2940 cactttgggtggcccaacacgtacgtgttcaccaaatccatgggggagatgatg 2993
>emb|CR855119.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0092G14, complete sequence Length = 83947 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 6926 tagatatcatcgtcaatggagc 6947 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 69656 tagatatcatcgtcaatggagc 69677
>dbj|AK241568.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065179E12, full insert sequence Length = 1757 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 380 tagatatcatcgtcaatggagc 401
>ref|NM_001059073.1| Oryza sativa (japonica cultivar-group) Os04g0353600 (Os04g0353600) mRNA, complete cds Length = 1332 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 338 tagatatcatcgtcaatggagc 359
>ref|NM_122155.2| Arabidopsis thaliana oxidoreductase, acting on the CH-CH group of donors (AT5G22500) mRNA, complete cds Length = 1739 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1584 gatcccaagtacattgactgggacaattat 1613 |||||||||| |||||| |||||||||||| Sbjct: 1494 gatcccaagtccattgattgggacaattat 1523
>gb|AY051075.1| Arabidopsis thaliana putative male sterility 2 protein (At5g22500) mRNA, complete cds Length = 1507 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1584 gatcccaagtacattgactgggacaattat 1613 |||||||||| |||||| |||||||||||| Sbjct: 1396 gatcccaagtccattgattgggacaattat 1425
>gb|AY035042.1| Arabidopsis thaliana putative male sterility 2 protein (At5g22500) mRNA, complete cds Length = 1752 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1584 gatcccaagtacattgactgggacaattat 1613 |||||||||| |||||| |||||||||||| Sbjct: 1494 gatcccaagtccattgattgggacaattat 1523
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 16894872 tagatatcatcgtcaatggagc 16894893 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 16957610 tagatatcatcgtcaatggagc 16957631
>emb|AL356475.11| Human DNA sequence from clone RP11-332H17 on chromosome 1 Contains the 5' end of the KIFAP3 gene for kinesin-associated protein 3 and a novel gene, complete sequence Length = 108047 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1710 aatacaattatgtgtttattct 1731 |||||||||||||||||||||| Sbjct: 16294 aatacaattatgtgtttattct 16273
>dbj|AB012244.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ16 Length = 57031 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1584 gatcccaagtacattgactgggacaattat 1613 |||||||||| |||||| |||||||||||| Sbjct: 27345 gatcccaagtccattgattgggacaattat 27374
>emb|BX830781.1|CNS0A27V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1584 gatcccaagtacattgactgggacaattat 1613 |||||||||| |||||| |||||||||||| Sbjct: 1496 gatcccaagtccattgattgggacaattat 1525
>emb|X99923.1|ATMS2LIPR A.thaliana mRNA for male sterility 2-like protein Length = 1710 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1584 gatcccaagtacattgactgggacaattat 1613 |||||||||| |||||| |||||||||||| Sbjct: 1472 gatcccaagtccattgattgggacaattat 1501
>emb|AL662991.3|OSJN00191 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002N06, complete sequence Length = 100589 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 18697 tagatatcatcgtcaatggagc 18718 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 81435 tagatatcatcgtcaatggagc 81456
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23, complete sequence Length = 156934 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tagatatcatcgtcaatggagc 535 |||||||||||||||||||||| Sbjct: 12866 tagatatcatcgtcaatggagc 12887
>gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete genome Length = 5257091 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 414 aataattttattgaagaaaagatat 438 |||||||||||||||| |||||||| Sbjct: 2789371 aataattttattgaaggaaagatat 2789347
>ref|XM_001021589.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00149540) mRNA, complete cds Length = 1773 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1546 acaaacaaaatagcaatgggaactattac 1574 |||| |||||||||||||| ||||||||| Sbjct: 689 acaagcaaaatagcaatggtaactattac 717
>gb|EF052237.1| Uncultured haptophyte clone MC622-77 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052133.1| Uncultured haptophyte clone MC615-61 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052072.1| Uncultured haptophyte clone 250304-87 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052070.1| Uncultured haptophyte clone 250304-85 16S ribosomal RNA gene, partial sequence; plastid Length = 835 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 503 actacaaatttctttgaaaga 523
>gb|EF052042.1| Uncultured haptophyte clone 250304-45 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052037.1| Uncultured haptophyte clone 250304-40 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052035.1| Uncultured haptophyte clone 250304-37 16S ribosomal RNA gene, partial sequence; plastid Length = 832 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052015.1| Uncultured haptophyte clone 250304-20 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF052011.1| Uncultured haptophyte clone 250304-14 16S ribosomal RNA gene, partial sequence; plastid Length = 837 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 505 actacaaatttctttgaaaga 525
>gb|EF052006.1| Uncultured haptophyte clone 250304-8 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051988.1| Uncultured haptophyte clone MAMA64-127 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051986.1| Uncultured haptophyte clone MAMA64-124 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051969.1| Uncultured haptophyte clone MAMA64-103 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051915.1| Uncultured haptophyte clone MC601-121 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051853.1| Uncultured haptophyte clone MC597-96 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051852.1| Uncultured haptophyte clone MC597-95 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051845.1| Uncultured haptophyte clone MC597-86 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051814.1| Uncultured haptophyte clone MC597-52 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051811.1| Uncultured haptophyte clone MC597-49 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051770.1| Uncultured haptophyte clone MC597-5 16S ribosomal RNA gene, partial sequence; plastid Length = 836 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 504 actacaaatttctttgaaaga 524
>gb|EF051764.1| Phaeocystis cordata strain Phaeonap 1 16S ribosomal RNA gene, partial sequence; plastid Length = 700 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 423 actacaaatttctttgaaaga 443
>gb|DQ466856.1| Buphagus erythrorhynchus voucher A. Helbig uncat. NADH dehydrogenase subunit 2 (ND2) gene, complete cds; mitochondrial Length = 1041 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 795 gatagttgttccacggagaaggctggtag 823 |||||||||||| ||||||||||||||| Sbjct: 57 gatagttgttcctaggagaaggctggtag 29
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 taccatgtaacatcatcgttgcgga 1200 |||||||||||||||| |||||||| Sbjct: 17919386 taccatgtaacatcattgttgcgga 17919362
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1287 gttcggctgaagaagatgcgg 1307 ||||||||||||||||||||| Sbjct: 1858527 gttcggctgaagaagatgcgg 1858507
>gb|AC121267.17| Mus musculus chromosome 19, clone RP24-444E1, complete sequence Length = 160720 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 aatctcaccttatctcaaggc 146 ||||||||||||||||||||| Sbjct: 97022 aatctcaccttatctcaaggc 97042
>gb|AE009211.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 237 of 256 of the complete sequence Length = 10956 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1287 gttcggctgaagaagatgcgg 1307 ||||||||||||||||||||| Sbjct: 342 gttcggctgaagaagatgcgg 322
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 gaaaactttggactagacaat 485 ||||||||||||||||||||| Sbjct: 87878 gaaaactttggactagacaat 87898
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1287 gttcggctgaagaagatgcgg 1307 ||||||||||||||||||||| Sbjct: 2622696 gttcggctgaagaagatgcgg 2622676
>gb|AY135684.1| Uncultured phototrophic eukaryote clone ANT18/2_96 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 702 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 438 actacaaatttctttgaaaga 458
>gb|AC124914.3| Homo sapiens chromosome 3 clone RP11-146K16, complete sequence Length = 187803 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ctttggtgggagatatcattt 462 ||||||||||||||||||||| Sbjct: 167885 ctttggtgggagatatcattt 167905
>gb|AY702172.1| Uncultured phototrophic eukaryote clone DYF25 16S ribosomal RNA gene, partial sequence; plastid Length = 1424 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 912 actacaaatttctttgaaaga 932
>gb|AC106864.5| Homo sapiens BAC clone RP11-148B6 from 4, complete sequence Length = 89690 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 811 agaaggctggtaggaaaaccatgaa 835 |||| |||||||||||||||||||| Sbjct: 83156 agaacgctggtaggaaaaccatgaa 83132
>gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179649 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 taccatgtaacatcatcgttgcgga 1200 |||||||||||||||| |||||||| Sbjct: 55800 taccatgtaacatcattgttgcgga 55824
>gb|AC098971.2| Homo sapiens chromosome 3 clone RP11-118N13, complete sequence Length = 175409 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ctttggtgggagatatcattt 462 ||||||||||||||||||||| Sbjct: 47385 ctttggtgggagatatcattt 47405
>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence Length = 163065 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1535 gatgaacaaggacaaacaaaa 1555 ||||||||||||||||||||| Sbjct: 78400 gatgaacaaggacaaacaaaa 78420
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1429 tcaacagaaaattcagattca 1449 ||||||||||||||||||||| Sbjct: 35574274 tcaacagaaaattcagattca 35574254
>dbj|AB199887.1| Dinophysis mitra chloroplast gene for 16S rRNA, partial sequence, clone:DM5 Length = 1217 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 actacaaatttctttgaaaga 560 ||||||||||||||||||||| Sbjct: 722 actacaaatttctttgaaaga 742
>gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence Length = 169462 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1535 gatgaacaaggacaaacaaaa 1555 ||||||||||||||||||||| Sbjct: 160749 gatgaacaaggacaaacaaaa 160769
>gb|AE009456.1| Brucella melitensis 16M chromosome I, section 13 of 195 of the complete sequence Length = 11111 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1287 gttcggctgaagaagatgcgg 1307 ||||||||||||||||||||| Sbjct: 10694 gttcggctgaagaagatgcgg 10714
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 gaaaactttggactagacaat 485 ||||||||||||||||||||| Sbjct: 98972 gaaaactttggactagacaat 98952
>gb|AC012496.10| Homo sapiens BAC clone RP11-341N18 from 2, complete sequence Length = 122770 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 agatatcatttatgaaaactt 472 ||||||||||||||||||||| Sbjct: 58675 agatatcatttatgaaaactt 58655
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1429 tcaacagaaaattcagattca 1449 ||||||||||||||||||||| Sbjct: 3424 tcaacagaaaattcagattca 3444
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1429 tcaacagaaaattcagattca 1449 ||||||||||||||||||||| Sbjct: 17165 tcaacagaaaattcagattca 17145
>gb|AY078448.1| Bactris gasipaes clone Bg21-CIAT microsatellite sequence Length = 533 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1107 gacatggtggtgaatgctatg 1127 ||||||||||||||||||||| Sbjct: 324 gacatggtggtgaatgctatg 344
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1287 gttcggctgaagaagatgcgg 1307 ||||||||||||||||||||| Sbjct: 1875507 gttcggctgaagaagatgcgg 1875487
>emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-120J22, complete sequence Length = 160764 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1718 tatgtgtttattcttgttatc 1738 ||||||||||||||||||||| Sbjct: 78008 tatgtgtttattcttgttatc 77988
>dbj|AP003472.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB173C10, complete sequence Length = 103804 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 tcaataattttattgaagaaa 432 ||||||||||||||||||||| Sbjct: 59761 tcaataattttattgaagaaa 59781
>gb|AC162372.5| Mus musculus chromosome 19, clone RP23-177G18, complete sequence Length = 178801 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 aatctcaccttatctcaaggc 146 ||||||||||||||||||||| Sbjct: 122639 aatctcaccttatctcaaggc 122619
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1287 gttcggctgaagaagatgcgg 1307 ||||||||||||||||||||| Sbjct: 1872635 gttcggctgaagaagatgcgg 1872615
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 aggcaggcagaagtagctgag 163 ||||||||||||||||||||| Sbjct: 39451 aggcaggcagaagtagctgag 39431 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 348,444,769 Number of extensions: 18437740 Number of successful extensions: 356896 Number of sequences better than 10.0: 113 Number of HSP's gapped: 356890 Number of HSP's successfully gapped: 199 Length of query: 1785 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1762 Effective length of database: 18,503,978,556 Effective search space: 32604010215672 Effective search space used: 32604010215672 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)