ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf18d13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063270:Os01g0217500 | 143 | 2e-34 | 2 | AK105855:Os06g0531200 | 108 | 4e-24 | 3 | AK072614:Os06g0531200 | 108 | 4e-24 | 4 | AK100463:Os01g0217800 | 108 | 6e-24 | 5 | AK102422:Os05g0519600 | 84 | 1e-16 | 6 | AK060016:Os06g0531200 | 70 | 3e-12 | 7 | AK071101:Os05g0519600 | 64 | 2e-10 | 8 | Os01g0907900:Os01g0907900 | 32 | 0.89 | 9 | AK109635:Os01g0740700 | 32 | 0.89 | 10 | Os07g0639500:Os07g0639500 | 31 | 1.5 | 11 | AK100610:Os08g0280200 | 31 | 1.5 | 12 | AK069036:Os08g0280200 | 31 | 1.5 | 13 | AK072026:Os11g0648000 | 30 | 2.0 | 14 | AK066444:Os11g0648000 | 30 | 2.0 | 15 | AK100540:Os02g0474000 | 29 | 4.4 | 16 | AK066609:Os02g0474000 | 29 | 4.4 | 17 | AK068618:Os02g0516600 | 29 | 4.4 | 18 | AK103240:Os04g0690400 | 28 | 7.5 | 19 | AK102981:Os04g0690400 | 28 | 7.5 | 20 | AK100753:Os04g0671700 | 28 | 9.9 | 21 | AK060701:Os03g0760700 | 28 | 9.9 |
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>AK063270:Os01g0217500 | Length = 395 Score = 143 bits (361), Expect = 2e-34 Identities = 76/131 (58%), Positives = 91/131 (69%), Gaps = 3/131 (2%) Frame = +2 Query: 179 MAMATSPSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDA-LLVEIMYGVKIX 355 MA SP KKVL+PIVAGTEP+EA++PID+LRRAGADVTVASA D L+VE+MYGV+I Sbjct: 1 MAAQASPPTKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIV 60 Query: 356 XXXXXXXXXXXS--YDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXX 529 + +DLIVLPGGVPGAANLGGCA LE ++R+H GGLY Sbjct: 61 ADALVAGGDCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLA 120 Query: 530 XXSWGLLDGHK 562 SWG+L+G K Sbjct: 121 LASWGMLNGLK 131 Score = 64.7 bits (156), Expect = 1e-10 Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 5/123 (4%) Frame = +2 Query: 209 KVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDA-LLVEIMYGVKI----XXXXXXX 373 KVL+P+ GTE +E ID+LRRA ADV VASA +A + + +G++I Sbjct: 217 KVLVPVANGTEEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIVADTTLDEAAA 276 Query: 374 XXXXXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLD 553 S+DLI+LPGG PGA + L +L+K Y GLL+ Sbjct: 277 DDQTSSFDLIILPGGTPGAKTMSSNEKLVTLLKKQAAASKPYGAIGAATAHVLEPHGLLE 336 Query: 554 GHK 562 G K Sbjct: 337 GKK 339
>AK105855:Os06g0531200 | Length = 434 Score = 108 bits (271), Expect = 4e-24 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 7/146 (4%) Frame = +2 Query: 146 PVHHLNSRKLTMAMATS------PSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVAS 307 P H + LT A+A+S P KKVL+PI +GTEP+EA I +D+LRRAGADV+VAS Sbjct: 21 PPHLRRLQTLTRALASSSSAMASPPAKKVLVPIASGTEPMEAVITVDVLRRAGADVSVAS 80 Query: 308 AGD-ALLVEIMYGVKIXXXXXXXXXXXXSYDLIVLPGGVPGAANLGGCATLEGILRKHVE 484 + V +GVK+ +DLI LPGG+PG++NL C LE +++KH Sbjct: 81 VDPGSAQVGGAWGVKLAADALLDDLADAEFDLISLPGGMPGSSNLRDCKLLENMVKKHAG 140 Query: 485 KGGLYXXXXXXXXXXXXSWGLLDGHK 562 KG LY SWGLL+G K Sbjct: 141 KGKLYAAICAAPAVALGSWGLLNGLK 166 Score = 69.7 bits (169), Expect = 3e-12 Identities = 44/118 (37%), Positives = 59/118 (50%) Frame = +2 Query: 209 KVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXXXXXXXXX 388 ++L+PI GTE +EA++ IDILRRA A+V VAS + L + VK+ Sbjct: 254 QILVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDALKQ 313 Query: 389 SYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLDGHK 562 YDLI+LPGG+ GA L G+++K E LY GLL G K Sbjct: 314 QYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKK 371
>AK072614:Os06g0531200 | Length = 434 Score = 108 bits (271), Expect = 4e-24 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 7/146 (4%) Frame = +2 Query: 146 PVHHLNSRKLTMAMATS------PSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVAS 307 P H + LT A+A+S P KKVL+PI +GTEP+EA I +D+LRRAGADV+VAS Sbjct: 21 PPHLRRLQTLTRALASSSSAMASPPAKKVLVPIASGTEPMEAVITVDVLRRAGADVSVAS 80 Query: 308 AGD-ALLVEIMYGVKIXXXXXXXXXXXXSYDLIVLPGGVPGAANLGGCATLEGILRKHVE 484 + V +GVK+ +DLI LPGG+PG++NL C LE +++KH Sbjct: 81 VDPGSAQVGGAWGVKLAADALLDDLADAEFDLISLPGGMPGSSNLRDCKLLENMVKKHAG 140 Query: 485 KGGLYXXXXXXXXXXXXSWGLLDGHK 562 KG LY SWGLL+G K Sbjct: 141 KGKLYAAICAAPAVALGSWGLLNGLK 166 Score = 69.7 bits (169), Expect = 3e-12 Identities = 44/118 (37%), Positives = 59/118 (50%) Frame = +2 Query: 209 KVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXXXXXXXXX 388 ++L+PI GTE +EA++ IDILRRA A+V VAS + L + VK+ Sbjct: 254 QILVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDALKQ 313 Query: 389 SYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLDGHK 562 YDLI+LPGG+ GA L G+++K E LY GLL G K Sbjct: 314 QYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKK 371
>AK100463:Os01g0217800 | Length = 513 Score = 108 bits (270), Expect = 6e-24 Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 5/146 (3%) Frame = +2 Query: 188 ATSPSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDA-----LLVEIMYGVKI 352 A + PK+VL+P+ GTEP+EA+ D+L RAGA VTVA+A A LLVE +GVK+ Sbjct: 115 AAAAEPKRVLVPVADGTEPVEAAATADVLNRAGARVTVATADPAGDDRGLLVEAAFGVKL 174 Query: 353 XXXXXXXXXXXXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXX 532 ++DLI LPGG+PG+ANL C LE +++K E+GGLY Sbjct: 175 VADGRVADLEGEAFDLIALPGGMPGSANLRDCKVLEKMVKKQAEQGGLYAAICATPAVTL 234 Query: 533 XSWGLLDGHKVCLGHMHFSRLFTRKV 610 WGLL G K + F FT ++ Sbjct: 235 AHWGLLKGLKATC-YPSFMEKFTAEI 259 Score = 69.7 bits (169), Expect = 3e-12 Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Frame = +2 Query: 209 KVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDAL-LVEIMYGVKIXXXXXXXXXXX 385 +VL+P+ G+E +EA IDILRRAGA+VTVAS D L +V + + Sbjct: 332 QVLVPVANGSEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIMVEEAAK 391 Query: 386 XSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLDGHK 562 +DLIV+PGG+PGA L L +L+K E Y GLL G K Sbjct: 392 REFDLIVMPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGLLKGKK 450
>AK102422:Os05g0519600 | Length = 454 Score = 84.3 bits (207), Expect = 1e-16 Identities = 50/126 (39%), Positives = 64/126 (50%) Frame = +2 Query: 188 ATSPSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXX 367 +T+P+ KKVLLPI GTE +EA I +LRRAGADVT+AS D L VE G I Sbjct: 61 STTPAKKKVLLPIAMGTEEMEAVILAGVLRRAGADVTLASVEDGLEVEASRGSHIVADKR 120 Query: 368 XXXXXXXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGL 547 +DL+ LPGG+PG+ L L+ I + E+ LY WGL Sbjct: 121 IAACADQVFDLVALPGGMPGSVRLRDSVILQRITVRQAEEKRLYGAICAAPAVVLMPWGL 180 Query: 548 LDGHKV 565 K+ Sbjct: 181 HKRKKI 186 Score = 55.1 bits (131), Expect = 8e-08 Identities = 31/96 (32%), Positives = 50/96 (52%) Frame = +2 Query: 212 VLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXXXXXXXXXS 391 VL+PI G+E +E + D+LRRA +V +AS + + ++I Sbjct: 272 VLIPIANGSEEMEIIMLTDVLRRANVNVVLASVEKSTSIVGSQRMRIVADKCISDASALE 331 Query: 392 YDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLY 499 YDLI+LPGG GA L + L+ +L++ + G +Y Sbjct: 332 YDLIILPGGPAGAERLHKSSVLKKLLKEQKQTGRMY 367
>AK060016:Os06g0531200 | Length = 289 Score = 69.7 bits (169), Expect = 3e-12 Identities = 44/118 (37%), Positives = 59/118 (50%) Frame = +2 Query: 209 KVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXXXXXXXXX 388 ++L+PI GTE +EA++ IDILRRA A+V VAS + L + VK+ Sbjct: 109 QILVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDALKQ 168 Query: 389 SYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLDGHK 562 YDLI+LPGG+ GA L G+++K E LY GLL G K Sbjct: 169 QYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKK 226
>AK071101:Os05g0519600 | Length = 238 Score = 63.5 bits (153), Expect = 2e-10 Identities = 36/75 (48%), Positives = 44/75 (58%) Frame = +2 Query: 188 ATSPSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXX 367 +T+P+ KKVLLPI GTE +EA I +LRRAGADVT+AS D L VE G I Sbjct: 61 STTPAKKKVLLPIAMGTEEMEAVILAGVLRRAGADVTLASVEDGLEVEASRGSHIVADKR 120 Query: 368 XXXXXXXSYDLIVLP 412 +DL+ LP Sbjct: 121 IAACADQVFDLVALP 135 Score = 38.9 bits (89), Expect = 0.006 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = +2 Query: 212 VLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKIXXXXXXXXXXXXS 391 VL+PI G+E +E + D+LRRA +V +AS + + ++I Sbjct: 162 VLIPIANGSEEMEIIMLTDVLRRANVNVVLASVEKSTSIVGSQRMRIVADKCISDASALE 221 Query: 392 YDLIVLP 412 YDLI+LP Sbjct: 222 YDLIILP 228
>Os01g0907900:Os01g0907900 | Length = 683 Score = 31.6 bits (70), Expect = 0.89 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%) Frame = -3 Query: 596 RVVKNAYAPSIPCVRRVG-----PRTPTPAAVQRIWRRRVLPSQRA 474 R+V PS+P RR G P PTP +Q WR PSQ A Sbjct: 287 RLVVEYTRPSLPGPRRRGHVSHQPLAPTPPRLQAAWRPAPAPSQSA 332
>AK109635:Os01g0740700 | Length = 234 Score = 31.6 bits (70), Expect = 0.89 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +2 Query: 26 RQPSLSCTVLRYLSRWRDLDELPPRPVNPTPEEKHCNCSLPVH 154 R P LSC R +S D+ PP P+ P+ + C LP+H Sbjct: 162 RPPPLSCHADRGVSE----DQPPPDPLRPSDPPRRCPLRLPLH 200
>Os07g0639500:Os07g0639500 | Length = 251 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +3 Query: 453 RWRAY*GSTLRREDSTPPYALHRRWR--WRPGAYST 554 RWR G RR + PP A RRWR W P A ST Sbjct: 144 RWRTSCGGGARRRRAPPP-ATTRRWRRTWSPRARST 178
>AK100610:Os08g0280200 | Length = 893 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 Query: 92 PPRPVNPTPEEKHCNCSLPVHHLNSRKLTMAMATSPSPKKVLLP 223 PPRP P+P + H + S P + T++ S +P LLP Sbjct: 336 PPRPAAPSPCQLHTSTSSPARPVPPPPPTLSTIRSSAPTPPLLP 379
>AK069036:Os08g0280200 | Length = 658 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 Query: 92 PPRPVNPTPEEKHCNCSLPVHHLNSRKLTMAMATSPSPKKVLLP 223 PPRP P+P + H + S P + T++ S +P LLP Sbjct: 101 PPRPAAPSPCQLHTSTSSPARPVPPPPPTLSTIRSSAPTPPLLP 144
>AK072026:Os11g0648000 | Length = 534 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +2 Query: 143 LPVHHLNSRKLTMAMATSPSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVAS 307 +P HLN + A++ PSPK L P++ ++ I + I R + +AS Sbjct: 435 IPARHLNRE--SSALSDPPSPKSFLDPLILNGSDVDPEIGVGIRRPTSLRLLLAS 487
>AK066444:Os11g0648000 | Length = 545 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +2 Query: 143 LPVHHLNSRKLTMAMATSPSPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVAS 307 +P HLN + A++ PSPK L P++ ++ I + I R + +AS Sbjct: 446 IPARHLNRE--SSALSDPPSPKSFLDPLILNGSDVDPEIGVGIRRPTSLRLLLAS 498
>AK100540:Os02g0474000 | Length = 72 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 533 PTPAAVQRIWRRRVLPSQRASSVCPPT 453 P P RRR+LPS+R S CPP+ Sbjct: 42 PLPGVGAWRQRRRLLPSRRGGSSCPPS 68
>AK066609:Os02g0474000 | Length = 72 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 533 PTPAAVQRIWRRRVLPSQRASSVCPPT 453 P P RRR+LPS+R S CPP+ Sbjct: 42 PLPGVGAWRQRRRLLPSRRGGSSCPPS 68
>AK068618:Os02g0516600 | Length = 744 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 74 RDLDELPPRPVNPTPEEKHCNCSLPVHHLNSRKLTMAMATSPS 202 R L PRP NP+P +H N S P R T A + PS Sbjct: 10 RGSQPLAPRPSNPSPGPRHGNSSAPPRRRGRRSPT-APVSPPS 51
>AK103240:Os04g0690400 | Length = 742 Score = 28.5 bits (62), Expect = 7.5 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = -3 Query: 551 RVGPRTPTPAAVQRIWRRRVLPSQRASSVCPPTSHN-HRDSQ-----RQEHH 414 R+ R P PA+ +RRR PS R PP++ N HRD + R+ HH Sbjct: 10 RIRGRDPPPASSGGRYRRR-SPSPRRHHRAPPSNPNPHRDRRTPDRPRRHHH 60
>AK102981:Os04g0690400 | Length = 742 Score = 28.5 bits (62), Expect = 7.5 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = -3 Query: 551 RVGPRTPTPAAVQRIWRRRVLPSQRASSVCPPTSHN-HRDSQ-----RQEHH 414 R+ R P PA+ +RRR PS R PP++ N HRD + R+ HH Sbjct: 10 RIRGRDPPPASSGGRYRRR-SPSPRRHHRAPPSNPNPHRDRRTPDRPRRHHH 60
>AK100753:Os04g0671700 | Length = 387 Score = 28.1 bits (61), Expect = 9.9 Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 15/88 (17%) Frame = +2 Query: 200 SPKKVLLPIVAGTEPIEASIPIDILRRAGADVTVA----SAGDALLVEIMYGV------- 346 +PKKVLL E EA +P L+ G V A AGD+ + G+ Sbjct: 2 APKKVLLLCGDYMEDYEAMVPFQALQAYGVSVDAACPGKKAGDSCRTAVHQGIGHQTYAE 61 Query: 347 ----KIXXXXXXXXXXXXSYDLIVLPGG 418 YD +V+PGG Sbjct: 62 SRGHNFALNASFDEVNINEYDGLVIPGG 89
>AK060701:Os03g0760700 | Length = 375 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -1 Query: 487 LLNVLPQYALQRRTTTEIRSARNTTGEDDEVVGSGGAVSQELV 359 LL P RR ++ +R A G +VG+ GAV QE + Sbjct: 13 LLGAYPGGGRARRPSSTVRMALREDGPSVAIVGATGAVGQEFL 55 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,193,444 Number of extensions: 596675 Number of successful extensions: 2295 Number of sequences better than 10.0: 21 Number of HSP's gapped: 2281 Number of HSP's successfully gapped: 27 Length of query: 327 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 226 Effective length of database: 11,355,714 Effective search space: 2566391364 Effective search space used: 2566391364 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
