ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf18d13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001048941.1| Oryza sativa (japonica cultivar-group) Os01g... 109 2e-20
2dbj|AK063270.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 2e-20
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-14
4dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-14
5ref|NM_001064318.1| Oryza sativa (japonica cultivar-group) Os06g... 52 0.004
6dbj|AK105855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.004
7dbj|AK072614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.004
8gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple... 48 0.060
9gb|AF445407.1|F445385S22 Homo sapiens MAP4K3 (MAP4K3) gene, exon 27 48 0.060
10gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 44 0.94
11gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.94
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.94
13dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.94
14ref|XM_418075.2| PREDICTED: Gallus gallus potassium voltage-gate... 42 3.7
15ref|NM_001071209.1| Oryza sativa (japonica cultivar-group) Os10g... 42 3.7
16ref|NM_001051457.1| Oryza sativa (japonica cultivar-group) Os01g... 42 3.7
17emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 42 3.7
18gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome... 42 3.7
19gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 3.7
20gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, compl... 42 3.7
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
23gb|AC108096.2| Homo sapiens chromosome 5 clone RP11-107O20, comp... 42 3.7
24gb|AC092276.2| Homo sapiens chromosome 5 clone CTD-2010P7, compl... 42 3.7
25gb|AC159640.2| Mus musculus BAC clone RP24-70O22 from chromosome... 42 3.7
26emb|CR318635.8| Zebrafish DNA sequence from clone CH211-253D2 in... 42 3.7
27emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 42 3.7
28emb|AL034559.4|PFMAL3P7 Plasmodium falciparum MAL3P7, complete s... 42 3.7
29emb|AJ271210.1|GGA271210 Gallus gallus partial mRNA for HERG pro... 42 3.7
30dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.7
31gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 42 3.7
32dbj|AK105017.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
33gb|AC105754.3| Homo sapiens chromosome 1 clone RP4-814E15, compl... 42 3.7
34dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
35dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
36dbj|AK071270.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
37dbj|AK062271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
38dbj|AK061419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.7
39gb|AC122733.11| Mus musculus chromosome 5, clone RP24-506B15, co... 42 3.7
40gb|AC099698.14| Mus musculus chromosome 5, clone RP23-415O9, com... 42 3.7
41dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, ... 42 3.7
42emb|AL671880.15| Mouse DNA sequence from clone RP23-384C22 on ch... 42 3.7 
>ref|NM_001048941.1| Oryza sativa (japonica cultivar-group) Os01g0217500 (Os01g0217500)
           mRNA, complete cds
          Length = 1474
 Score =  109 bits (55), Expect = 2e-20
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                       
Query: 374 gactgcgccgccgcttcctacgacctcatcgtcctccccggtggtgttcctggcgctgcg 433
           |||||||||||||||  || |||||||||||||||||| || || ||||| ||||| |||
Sbjct: 318 gactgcgccgccgctcacttcgacctcatcgtcctcccgggaggggttccaggcgcggcg 377

                                                                       
Query: 434 aatctcggtggttgtgcgacgttggagggcatactgaggaagcacgttgagaagggagga 493
           || ||||| || || ||| || |||| | |||  |||||| |||||  | ||  ||||| 
Sbjct: 378 aacctcggcggctgcgcggcgctggaagccatggtgaggaggcacgcggcgaccggaggt 437

                                                              
Query: 494 ctctacgccgccatatgcgctgcaccgccgctggcgttggcgtcctggggc 544
           |||||||||||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 438 ctctacgccgccatctgcgccgcgccgccgctggcgctggcgtcctggggc 488



 Score = 97.6 bits (49), Expect = 7e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 206 aagaaggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatc 265
           ||||||||| || ||||||||||||||||||| |||||| | |||||| |  | ||||||
Sbjct: 141 aagaaggtgttggtgccgatcgtcgccggcacggagccggtggaggcggcggtgcccatc 200

                                                    
Query: 266 gacatcctccgccgcgccggcgccgacgttaccgtcgcttc 306
           ||| ||||||||||||||||||| ||||| ||||| |||||
Sbjct: 201 gacgtcctccgccgcgccggcgcggacgtcaccgtggcttc 241
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>dbj|AK063270.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B10, full
           insert sequence
          Length = 1474

 Score =  109 bits (55), Expect = 2e-20
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                       
Query: 374 gactgcgccgccgcttcctacgacctcatcgtcctccccggtggtgttcctggcgctgcg 433
           |||||||||||||||  || |||||||||||||||||| || || ||||| ||||| |||
Sbjct: 318 gactgcgccgccgctcacttcgacctcatcgtcctcccgggaggggttccaggcgcggcg 377

                                                                       
Query: 434 aatctcggtggttgtgcgacgttggagggcatactgaggaagcacgttgagaagggagga 493
           || ||||| || || ||| || |||| | |||  |||||| |||||  | ||  ||||| 
Sbjct: 378 aacctcggcggctgcgcggcgctggaagccatggtgaggaggcacgcggcgaccggaggt 437

                                                              
Query: 494 ctctacgccgccatatgcgctgcaccgccgctggcgttggcgtcctggggc 544
           |||||||||||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 438 ctctacgccgccatctgcgccgcgccgccgctggcgctggcgtcctggggc 488



 Score = 97.6 bits (49), Expect = 7e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 206 aagaaggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatc 265
           ||||||||| || ||||||||||||||||||| |||||| | |||||| |  | ||||||
Sbjct: 141 aagaaggtgttggtgccgatcgtcgccggcacggagccggtggaggcggcggtgcccatc 200

                                                    
Query: 266 gacatcctccgccgcgccggcgccgacgttaccgtcgcttc 306
           ||| ||||||||||||||||||| ||||| ||||| |||||
Sbjct: 201 gacgtcctccgccgcgccggcgcggacgtcaccgtggcttc 241
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                           
Query: 210     aggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatcgaca 269
               ||||| || ||||||||||||||||||| |||||| | |||||| |  | ||||||||| 
Sbjct: 6411999 aggtgttggtgccgatcgtcgccggcacggagccggtggaggcggcggtgcccatcgacg 6412058

                                                    
Query: 270     tcctccgccgcgccggcgccgacgttaccgtcgcttc 306
               ||||||||||||||||||| ||||| ||||| |||||
Sbjct: 6412059 tcctccgccgcgccggcgcggacgtcaccgtggcttc 6412095



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 488     ggaggactctacgccgccatatgcgctgcaccgccgctggcgttggcgtcctggggc 544
               ||||| |||||||||||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 6412377 ggaggtctctacgccgccatctgcgccgcgccgccgctggcgctggcgtcctggggc 6412433



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 374     gactgcgccgccgcttcctacgacctcatcgtcctccc 411
               |||||||||||||||  || ||||||||||||||||||
Sbjct: 6412172 gactgcgccgccgctcacttcgacctcatcgtcctccc 6412209



 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 275      cgccgcgccggcgccgacgtt 295
                |||||||||||||||||||||
Sbjct: 37647191 cgccgcgccggcgccgacgtt 37647171
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>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665D10
          Length = 134967

 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                         
Query: 210   aggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatcgaca 269
             ||||| || ||||||||||||||||||| |||||| | |||||| |  | ||||||||| 
Sbjct: 34394 aggtgttggtgccgatcgtcgccggcacggagccggtggaggcggcggtgcccatcgacg 34453

                                                  
Query: 270   tcctccgccgcgccggcgccgacgttaccgtcgcttc 306
             ||||||||||||||||||| ||||| ||||| |||||
Sbjct: 34454 tcctccgccgcgccggcgcggacgtcaccgtggcttc 34490



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 488   ggaggactctacgccgccatatgcgctgcaccgccgctggcgttggcgtcctggggc 544
             ||||| |||||||||||||| ||||| || |||||||||||| ||||||||||||||
Sbjct: 34772 ggaggtctctacgccgccatctgcgccgcgccgccgctggcgctggcgtcctggggc 34828



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 374   gactgcgccgccgcttcctacgacctcatcgtcctccc 411
             |||||||||||||||  || ||||||||||||||||||
Sbjct: 34567 gactgcgccgccgctcacttcgacctcatcgtcctccc 34604
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>ref|NM_001064318.1| Oryza sativa (japonica cultivar-group) Os06g0531200 (Os06g0531200)
           mRNA, partial cds
          Length = 1495

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 206 aagaaggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatc 265
           |||||||||||| |||||||||    ||| || |||||||| |||||   |||| || ||
Sbjct: 139 aagaaggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtc 198

                                                 
Query: 266 gacatcctccgccgcgccggcgccgacgttaccgtcgc 303
           ||| | |||||||||||||| ||||||||  |||||||
Sbjct: 199 gacgtgctccgccgcgccggggccgacgtctccgtcgc 236
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>dbj|AK105855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H05, full
           insert sequence
          Length = 1495

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 206 aagaaggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatc 265
           |||||||||||| |||||||||    ||| || |||||||| |||||   |||| || ||
Sbjct: 139 aagaaggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtc 198

                                                 
Query: 266 gacatcctccgccgcgccggcgccgacgttaccgtcgc 303
           ||| | |||||||||||||| ||||||||  |||||||
Sbjct: 199 gacgtgctccgccgcgccggggccgacgtctccgtcgc 236
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>dbj|AK072614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133K03, full
           insert sequence
          Length = 1495

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 206 aagaaggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatc 265
           |||||||||||| |||||||||    ||| || |||||||| |||||   |||| || ||
Sbjct: 140 aagaaggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtc 199

                                                 
Query: 266 gacatcctccgccgcgccggcgccgacgttaccgtcgc 303
           ||| | |||||||||||||| ||||||||  |||||||
Sbjct: 200 gacgtgctccgccgcgccggggccgacgtctccgtcgc 237
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>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 48.1 bits (24), Expect = 0.060
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 923    atatatgttggcaaacttagtatatgaa 950
              |||||||| |||||||||||||||||||
Sbjct: 191550 atatatgtaggcaaacttagtatatgaa 191523
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>gb|AF445407.1|F445385S22 Homo sapiens MAP4K3 (MAP4K3) gene, exon 27
          Length = 346

 Score = 48.1 bits (24), Expect = 0.060
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 923 atatatgttggcaaacttagtatatgaa 950
           |||||||| |||||||||||||||||||
Sbjct: 207 atatatgtaggcaaacttagtatatgaa 180
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 44.1 bits (22), Expect = 0.94
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 270     tcctccgccgcgccggcgccga 291
               ||||||||||||||||||||||
Sbjct: 3112824 tcctccgccgcgccggcgccga 3112803
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.94
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 412     cggtggtgttcctggcgctgcg 433
               ||||||||||||||||||||||
Sbjct: 4217344 cggtggtgttcctggcgctgcg 4217323
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.94
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                            
Query: 210      aggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatcgaca 269
                |||||||| |||||||||    ||| || |||||||| |||||   |||| || ||||| 
Sbjct: 19481510 aggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtcgacg 19481451

                                                  
Query: 270      tcctccgccgcgccggcgccgacgttaccgtcgc 303
                | |||||||||||||| ||||||||  |||||||
Sbjct: 19481450 tgctccgccgcgccggggccgacgtctccgtcgc 19481417
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>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0410C01
          Length = 138424

 Score = 44.1 bits (22), Expect = 0.94
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                         
Query: 210   aggtgctgctgccgatcgtcgccggcacagagccgatcgaggcgtccatccccatcgaca 269
             |||||||| |||||||||    ||| || |||||||| |||||   |||| || ||||| 
Sbjct: 99919 aggtgctggtgccgatcgcgagcgggacggagccgatggaggccgtcatcaccgtcgacg 99860

                                               
Query: 270   tcctccgccgcgccggcgccgacgttaccgtcgc 303
             | |||||||||||||| ||||||||  |||||||
Sbjct: 99859 tgctccgccgcgccggggccgacgtctccgtcgc 99826
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>ref|XM_418075.2| PREDICTED: Gallus gallus potassium voltage-gated channel, subfamily
           H (eag-related), member 6 (KCNH6), mRNA
          Length = 3288

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 119 gaggagaagcactgcaactgcagct 143
           |||||||||||||| ||||||||||
Sbjct: 943 gaggagaagcactggaactgcagct 967
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>ref|NM_001071209.1| Oryza sativa (japonica cultivar-group) Os10g0437000 (Os10g0437000)
            mRNA, complete cds
          Length = 1718

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 266  gacatcctccgccgcgccggcgccg 290
            |||||||||||||||| ||||||||
Sbjct: 1277 gacatcctccgccgcgacggcgccg 1301
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>ref|NM_001051457.1| Oryza sativa (japonica cultivar-group) Os01g0868900 (Os01g0868900)
            mRNA, complete cds
          Length = 2548

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  cgccgcgccggcgccgacgtt 295
            |||||||||||||||||||||
Sbjct: 2099 cgccgcgccggcgccgacgtt 2079
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>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1
          Length = 4052032

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 273     tccgccgcgccggcgccgacg 293
               |||||||||||||||||||||
Sbjct: 3734801 tccgccgcgccggcgccgacg 3734821
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>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0085G12, complete sequence
          Length = 121470

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 260   cccatcgacatcctccgccgcgccggcgccgac 292
             |||||||||||| ||||||||| ||||| ||||
Sbjct: 93533 cccatcgacatcgtccgccgcggcggcgacgac 93565
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 273     tccgccgcgccggcgccgacg 293
               |||||||||||||||||||||
Sbjct: 3461405 tccgccgcgccggcgccgacg 3461425
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>gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, complete sequence
          Length = 163817

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 790    tttattttccttcaatctaag 810
              |||||||||||||||||||||
Sbjct: 153688 tttattttccttcaatctaag 153668
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 260      cccatcgacatcctccgccgcgccggcgccgac 292
                |||||||||||| ||||||||| ||||| ||||
Sbjct: 17025877 cccatcgacatcgtccgccgcggcggcgacgac 17025909
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 266      gacatcctccgccgcgccggcgccg 290
                |||||||||||||||| ||||||||
Sbjct: 15110057 gacatcctccgccgcgacggcgccg 15110081
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>gb|AC108096.2| Homo sapiens chromosome 5 clone RP11-107O20, complete sequence
          Length = 160808

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 790   tttattttccttcaatctaag 810
             |||||||||||||||||||||
Sbjct: 61805 tttattttccttcaatctaag 61785
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>gb|AC092276.2| Homo sapiens chromosome 5 clone CTD-2010P7, complete sequence
          Length = 84404

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 790   tttattttccttcaatctaag 810
             |||||||||||||||||||||
Sbjct: 62347 tttattttccttcaatctaag 62327
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>gb|AC159640.2| Mus musculus BAC clone RP24-70O22 from chromosome 12, complete sequence
          Length = 214955

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 785   atgattttattttccttcaat 805
             |||||||||||||||||||||
Sbjct: 49122 atgattttattttccttcaat 49102
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>emb|CR318635.8| Zebrafish DNA sequence from clone CH211-253D2 in linkage group 23,
             complete sequence
          Length = 154312

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 631   tgattacatttatttatacat 651
             |||||||||||||||||||||
Sbjct: 64843 tgattacatttatttatacat 64863
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>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 272    ctccgccgcgccggcgccgac 292
              |||||||||||||||||||||
Sbjct: 151449 ctccgccgcgccggcgccgac 151429
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>emb|AL034559.4|PFMAL3P7 Plasmodium falciparum MAL3P7, complete sequence
          Length = 253305

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 621    ggtatttatatgattacattt 641
              |||||||||||||||||||||
Sbjct: 169099 ggtatttatatgattacattt 169119
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>emb|AJ271210.1|GGA271210 Gallus gallus partial mRNA for HERG protein (erg gene)
          Length = 1581

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 119 gaggagaagcactgcaactgcagct 143
           |||||||||||||| ||||||||||
Sbjct: 416 gaggagaagcactggaactgcagct 440
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    cgccgcgccggcgccgacgtt 295
              |||||||||||||||||||||
Sbjct: 107665 cgccgcgccggcgccgacgtt 107645
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
             complete sequence
          Length = 129420

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 266   gacatcctccgccgcgccggcgccg 290
             |||||||||||||||| ||||||||
Sbjct: 18670 gacatcctccgccgcgacggcgccg 18694
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>dbj|AK105017.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G02, full
            insert sequence
          Length = 1713

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 266  gacatcctccgccgcgccggcgccg 290
            |||||||||||||||| ||||||||
Sbjct: 1273 gacatcctccgccgcgacggcgccg 1297
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>gb|AC105754.3| Homo sapiens chromosome 1 clone RP4-814E15, complete sequence
          Length = 133799

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 898    tgtgtatgacaaaaaagtgtg 918
              |||||||||||||||||||||
Sbjct: 109069 tgtgtatgacaaaaaagtgtg 109049
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>dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O14, full
            insert sequence
          Length = 2549

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  cgccgcgccggcgccgacgtt 295
            |||||||||||||||||||||
Sbjct: 2100 cgccgcgccggcgccgacgtt 2080
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>dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O13, full
            insert sequence
          Length = 2549

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  cgccgcgccggcgccgacgtt 295
            |||||||||||||||||||||
Sbjct: 2100 cgccgcgccggcgccgacgtt 2080
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>dbj|AK071270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087N08, full
            insert sequence
          Length = 1719

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 266  gacatcctccgccgcgccggcgccg 290
            |||||||||||||||| ||||||||
Sbjct: 1278 gacatcctccgccgcgacggcgccg 1302
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>dbj|AK062271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A07, full
            insert sequence
          Length = 1704

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  cgccgcgccggcgccgacgtt 295
            |||||||||||||||||||||
Sbjct: 1351 cgccgcgccggcgccgacgtt 1331
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>dbj|AK061419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F02, full
            insert sequence
          Length = 1704

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 266  gacatcctccgccgcgccggcgccg 290
            |||||||||||||||| ||||||||
Sbjct: 1287 gacatcctccgccgcgacggcgccg 1311
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>gb|AC122733.11| Mus musculus chromosome 5, clone RP24-506B15, complete sequence
          Length = 157625

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 782   ggcatgattttattttccttc 802
             |||||||||||||||||||||
Sbjct: 30264 ggcatgattttattttccttc 30284
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>gb|AC099698.14| Mus musculus chromosome 5, clone RP23-415O9, complete sequence
          Length = 220813

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 782   ggcatgattttattttccttc 802
             |||||||||||||||||||||
Sbjct: 86936 ggcatgattttattttccttc 86916
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>dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 tcctccgccgcgccggcgccg 290
           |||||||||||||||||||||
Sbjct: 64  tcctccgccgcgccggcgccg 84
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>emb|AL671880.15| Mouse DNA sequence from clone RP23-384C22 on chromosome X, complete
             sequence
          Length = 200535

 Score = 42.1 bits (21), Expect = 3.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 782   ggcatgattttattttccttc 802
             |||||||||||||||||||||
Sbjct: 36939 ggcatgattttattttccttc 36959


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 164,766,051
Number of extensions: 8546691
Number of successful extensions: 186622
Number of sequences better than 10.0: 42
Number of HSP's gapped: 186617
Number of HSP's successfully gapped: 49
Length of query: 982
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 959
Effective length of database: 18,503,978,556
Effective search space: 17745315435204
Effective search space used: 17745315435204
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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