Clone Information

BLAST Search Result

Clone Name	FLbaf21e18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|CT832922.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	301	4e-78
2	ref\|NM_001056185.1\| Oryza sativa (japonica cultivar-group) Os03g...	289	1e-74
3	dbj\|AK065578.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	281	3e-72
4	gb\|AY105790.1\| Zea mays PCO079761 mRNA sequence	258	5e-65
5	gb\|BT018387.1\| Zea mays clone EL01N0313G10.d mRNA sequence	234	7e-58
6	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	151	8e-33
7	gb\|AC135205.4\| Oryza sativa (japonica cultivar-group) chromosome...	151	8e-33
8	dbj\|BS000016.1\| Pan troglodytes chromosome 22 clone:PTB-066F21, ...	46	0.36
9	gb\|CP000285.1\| Chromohalobacter salexigens DSM 3043, complete ge...	44	1.4
10	gb\|AC165351.2\| Mus musculus BAC clone RP23-197K16 from chromosom...	44	1.4
11	gb\|AY634267.1\| Human coxsackievirus B1 isolate F16 VP1 gene, par...	44	1.4
12	gb\|AC115055.9\| Mus musculus chromosome 3, clone RP24-346I12, com...	44	1.4
13	gb\|AC124499.3\| Mus musculus BAC clone RP24-68G23 from chromosome...	44	1.4
14	gb\|AC092962.4\| Homo sapiens 3 BAC RP11-698E5 (Roswell Park Cance...	44	1.4
15	emb\|BX537319.9\| Zebrafish DNA sequence from clone CH211-248N8 in...	44	1.4
16	emb\|CR933786.10\| Zebrafish DNA sequence from clone CH211-44M8 in...	42	5.6
17	emb\|CT954290.4\| N.leucogenys DNA sequence from clone CH271-224A1...	42	5.6
18	gb\|AC161219.4\| Mus musculus chromosome 7, clone RP23-83E16, comp...	42	5.6
19	gb\|BT019263.1\| Zea mays clone Contig936.F mRNA sequence	42	5.6
20	gb\|AC161440.8\| Mus musculus chromosome 7, clone RP23-309B10, com...	42	5.6
21	ref\|XM_705696.1\| Candida albicans SC5314 hypothetical protein (C...	42	5.6
22	ref\|XM_705683.1\| Candida albicans SC5314 hypothetical protein (C...	42	5.6
23	ref\|XM_504178.1\| Yarrowia lipolytica CLIB122, YALI0E20207g predi...	42	5.6
24	gb\|AF351249.1\| Gossypium hirsutum clone JESPR7 microsatellite se...	42	5.6
25	gb\|AC105748.2\| Homo sapiens chromosome 3 clone RP11-532I6, compl...	42	5.6
26	gb\|AC104072.3\| Homo sapiens BAC clone RP11-320H14 from 4, comple...	42	5.6
27	emb\|AL022576.2\|HS20J23 Human DNA sequence from clone RP1-20J23 o...	42	5.6
28	emb\|AL161581.2\|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ...	42	5.6
29	emb\|AL022537.1\|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BA...	42	5.6
30	emb\|AJ224324.1\|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31...	42	5.6
31	gb\|AC093745.3\| Homo sapiens BAC clone RP11-25B15 from 4, complet...	42	5.6
32	emb\|BX005425.12\| Zebrafish DNA sequence from clone DKEY-7O6 in l...	42	5.6
33	dbj\|BS000204.1\| Pan troglodytes chromosome 22 clone:RP43-139K21,...	42	5.6
34	dbj\|BS000115.1\| Pan troglodytes chromosome 22 clone:PTB-047E23, ...	42	5.6
35	dbj\|AP001726.1\| Homo sapiens genomic DNA, chromosome 21q, sectio...	42	5.6
36	gb\|AE015451.1\| Pseudomonas putida KT2440 complete genome	42	5.6
37	emb\|CR382131.1\| Yarrowia lipolytica chromosome E of strain CLIB ...	42	5.6
38	gb\|U44858.1\|HSU44858 Human Down Syndrome region of chromosome 21...	42	5.6
39	dbj\|AP000696.1\| Homo sapiens genomic DNA, chromosome 21q22.2, BA...	42	5.6
40	dbj\|AP000695.1\| Homo sapiens genomic DNA, chromosome 21q22.2, BA...	42	5.6
41	gb\|M74566.1\|MZENBPAA Zea mays nucleic acid-binding protein (NBP)	42	5.6

>emb|CT832922.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN029F21, full
           insert sequence
          Length = 1571
 Score =  301 bits (152), Expect = 4e-78
 Identities = 334/392 (85%), Gaps = 2/392 (0%)
 Strand = Plus / Plus

                                                                       
Query: 76  aggtacaggagtcgttcaaggagtgtggactcgagtgatgttgagaaccctgggaacaat 135
           ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||||||| 
Sbjct: 181 aggtataggagtcgttctagaagtgtggactcaagtgatgttgaaaaccctgggaacaac 240

                                                                       
Query: 136 ctctttgtgactggtttatcatctcgtctaactgatcgagatctggagaagcatttctct 195
           || | ||| ||||| |||||  ||||| | || ||||||||||||||||| || || |||
Sbjct: 241 ctgtatgttactggcttatctgctcgtgtgacagatcgagatctggagaaacacttttct 300

                                                                       
Query: 196 acagagggagaggtgattgatgcaagtattgtacttgatccatggacaagggaatcacgg 255
            | ||||||||||| |||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 301 gctgagggagaggttattgatgctagcatagtacttgatccatggacaagggaatcccgg 360

                                                                       
Query: 256 ggatttggatttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctc 315
           ||||||||||||||||||||||| | | |||||||||| || |  |||||||||||||| 
Sbjct: 361 ggatttggatttgttaccatggctactgttaaggaggctgatctttgcatcaaatatcta 420

                                                                       
Query: 316 gacagttcagtgctggaaggtcgtgtcattactgttgagaagattttgttgacagcagca 375
           ||| | |||||| ||||||||||||| || ||||| |||||| |||||||||||||||||
Sbjct: 421 gaccgctcagtgttggaaggtcgtgtgataactgtagagaagcttttgttgacagcagca 480

                                                                       
Query: 376 -ggttgatgcccgcagctgtatggcatcaaattcaaaagatacacaacctaagatcgaaa 434
            ||| |||| |||  ||||     | |||||||||||||||  ||||||||| | | |||
Sbjct: 481 gggtagatgtccgttgctgctctacgtcaaattcaaaagatttacaacctaacagccaaa 540

                                           
Query: 435 caatgctacctcaaccaaagggttgtacgccc 466
           | ||||||||||||||||||||||||| ||||
Sbjct: 541 c-atgctacctcaaccaaagggttgtatgccc 571



 Score =  101 bits (51), Expect = 7e-18
 Identities = 132/159 (83%)
 Strand = Plus / Plus

                                                                        
Query: 955  accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 1014
            ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| |  ||
Sbjct: 1051 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccatcctg 1110

                                                                        
Query: 1015 tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 1074
            ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 1111 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 1170

                                                   
Query: 1075 gcgtatcaccacgcaggagctactcccgtagctgctccc 1113
            | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 1171 gtgtatcacctcagaggagctactcccatagctgttccc 1209



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 137/171 (80%)
 Strand = Plus / Plus

                                                                       
Query: 681 agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 740
           |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 786 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 845

                                                                       
Query: 741 agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 800
           ||| | |||||||| ||||   |  ||||||  ||||| |||||||||||||  ||| | 
Sbjct: 846 agaaggcgatcatattctccatacaacaggcgaagatcgtactccccctatgagaggcgt 905

                                                              
Query: 801 ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 851
             ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 906 agatcctactctccacatgaaaggagacggtcctactctccgtatggcaga 956



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1200 aagaggcgttctagagaaagctatgcgcacagccgcagttcatgctcgaggtccgtctcc 1259
            ||||||| |||||| || |||||  | |||||||||||||| | ||| ||||| ||||||
Sbjct: 1290 aagaggcattctagggagagctactctcacagccgcagttcctactcaaggtctgtctcc 1349

                        
Query: 1260 agggagcgctca 1271
            ||||||||||||
Sbjct: 1350 agggagcgctca 1361



 Score = 58.0 bits (29), Expect = 9e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 576 ccacaggcaaagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaa 635
           |||||||| ||||||||||| |||||||| ||||| || |||||||| || ||||  |||
Sbjct: 672 ccacaggccaagagaagacgtggtcgaacaccaacgcccggaaggtatctaggcacaaaa 731

                
Query: 636 tcatc 640
           |||||
Sbjct: 732 tcatc 736

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>ref|NM_001056185.1| Oryza sativa (japonica cultivar-group) Os03g0265600 (Os03g0265600)
           mRNA, complete cds
          Length = 1437

 Score =  289 bits (146), Expect = 1e-74
 Identities = 325/382 (85%), Gaps = 2/382 (0%)
 Strand = Plus / Plus

                                                                       
Query: 76  aggtacaggagtcgttcaaggagtgtggactcgagtgatgttgagaaccctgggaacaat 135
           ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||||||| 
Sbjct: 164 aggtataggagtcgttctagaagtgtggactcaagtgatgttgaaaaccctgggaacaac 223

                                                                       
Query: 136 ctctttgtgactggtttatcatctcgtctaactgatcgagatctggagaagcatttctct 195
           || | ||| ||||| |||||  ||||| | || ||||||||||||||||| || || |||
Sbjct: 224 ctgtatgttactggcttatctgctcgtgtgacagatcgagatctggagaaacacttttct 283

                                                                       
Query: 196 acagagggagaggtgattgatgcaagtattgtacttgatccatggacaagggaatcacgg 255
            | ||||||||||| |||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 284 gctgagggagaggttattgatgctagcatagtacttgatccatggacaagggaatcccgg 343

                                                                       
Query: 256 ggatttggatttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctc 315
           ||||||||||||||||||||||| | | |||||||||| || |  |||||||||||||| 
Sbjct: 344 ggatttggatttgttaccatggctactgttaaggaggctgatctttgcatcaaatatcta 403

                                                                       
Query: 316 gacagttcagtgctggaaggtcgtgtcattactgttgagaagattttgttgacagcagca 375
           ||| | |||||| ||||||||||||| || ||||| |||||| |||||||||||||||||
Sbjct: 404 gaccgctcagtgttggaaggtcgtgtgataactgtagagaagcttttgttgacagcagca 463

                                                                       
Query: 376 -ggttgatgcccgcagctgtatggcatcaaattcaaaagatacacaacctaagatcgaaa 434
            ||| |||| |||  ||||     | |||||||||||||||  ||||||||| | | |||
Sbjct: 464 gggtagatgtccgttgctgctctacgtcaaattcaaaagatttacaacctaacagccaaa 523

                                 
Query: 435 caatgctacctcaaccaaaggg 456
           | ||||||||||||||||||||
Sbjct: 524 c-atgctacctcaaccaaaggg 544



 Score =  109 bits (55), Expect = 3e-20
 Identities = 133/159 (83%)
 Strand = Plus / Plus

                                                                        
Query: 955  accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 1014
            ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 917  accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 976

                                                                        
Query: 1015 tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 1074
            ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 977  tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 1036

                                                   
Query: 1075 gcgtatcaccacgcaggagctactcccgtagctgctccc 1113
            | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 1037 gtgtatcacctcagaggagctactcccatagctgttccc 1075



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                       
Query: 681 agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 740
           |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 652 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 711

                                                                       
Query: 741 agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 800
           ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 712 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 771

                                                              
Query: 801 ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 851
             ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 772 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 822



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1200 aagaggcgttctagagaaagctatgcgcacagccgcagttcatgctcgaggtccgtctcc 1259
            ||||||| |||||| || |||||  | |||||||||||||| | ||| ||||| ||||||
Sbjct: 1156 aagaggcattctagggagagctactctcacagccgcagttcctactcaaggtctgtctcc 1215

                        
Query: 1260 agggagcgctca 1271
            ||||||||||||
Sbjct: 1216 agggagcgctca 1227



 Score = 48.1 bits (24), Expect = 0.091
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 585 aagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaatcatc 640
           ||||||||||| |||||||| ||||| || |||||||| || ||||  ||||||||
Sbjct: 547 aagagaagacgtggtcgaacaccaacgcccggaaggtatctaggcacaaaatcatc 602

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>dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026M08, full
           insert sequence
          Length = 1438

 Score =  281 bits (142), Expect = 3e-72
 Identities = 324/382 (84%), Gaps = 2/382 (0%)
 Strand = Plus / Plus

                                                                       
Query: 76  aggtacaggagtcgttcaaggagtgtggactcgagtgatgttgagaaccctgggaacaat 135
           ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||||||| 
Sbjct: 165 aggtataggagtcgttctagaagtgtggactcaagtgatgttgaaaaccctgggaacaac 224

                                                                       
Query: 136 ctctttgtgactggtttatcatctcgtctaactgatcgagatctggagaagcatttctct 195
           || | ||| ||||| |||||  ||||| | || ||||||||||||||||| || || |||
Sbjct: 225 ctgtatgttactggcttatctgctcgtgtgacagatcgagatctggagaaacacttttct 284

                                                                       
Query: 196 acagagggagaggtgattgatgcaagtattgtacttgatccatggacaagggaatcacgg 255
            | ||||||||||| |||||||| || || |||||||||||||||||||||||||  |||
Sbjct: 285 gctgagggagaggttattgatgctagcatagtacttgatccatggacaagggaattccgg 344

                                                                       
Query: 256 ggatttggatttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctc 315
           ||||||||||||||||||||||| | | |||||||||| || |  |||||||||||||| 
Sbjct: 345 ggatttggatttgttaccatggctactgttaaggaggctgatctttgcatcaaatatcta 404

                                                                       
Query: 316 gacagttcagtgctggaaggtcgtgtcattactgttgagaagattttgttgacagcagca 375
           ||| | |||||| ||||||||||||| || ||||| |||||| |||||||||||||||||
Sbjct: 405 gaccgctcagtgttggaaggtcgtgtgataactgtagagaagcttttgttgacagcagca 464

                                                                       
Query: 376 -ggttgatgcccgcagctgtatggcatcaaattcaaaagatacacaacctaagatcgaaa 434
            ||| |||| |||  ||||     | |||||||||||||||  ||||||||| | | |||
Sbjct: 465 gggtagatgtccgttgctgctctacgtcaaattcaaaagatttacaacctaacagccaaa 524

                                 
Query: 435 caatgctacctcaaccaaaggg 456
           | ||||||||||||||||||||
Sbjct: 525 c-atgctacctcaaccaaaggg 545



 Score =  109 bits (55), Expect = 3e-20
 Identities = 133/159 (83%)
 Strand = Plus / Plus

                                                                        
Query: 955  accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 1014
            ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 918  accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 977

                                                                        
Query: 1015 tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 1074
            ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 978  tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 1037

                                                   
Query: 1075 gcgtatcaccacgcaggagctactcccgtagctgctccc 1113
            | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 1038 gtgtatcacctcagaggagctactcccatagctgttccc 1076



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                       
Query: 681 agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 740
           |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 653 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 712

                                                                       
Query: 741 agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 800
           ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 713 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 772

                                                              
Query: 801 ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 851
             ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 773 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 823



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1200 aagaggcgttctagagaaagctatgcgcacagccgcagttcatgctcgaggtccgtctcc 1259
            ||||||| |||||| || |||||  | |||||||||||||| | ||| ||||| ||||||
Sbjct: 1157 aagaggcattctagggagagctactctcacagccgcagttcctactcaaggtctgtctcc 1216

                        
Query: 1260 agggagcgctca 1271
            ||||||||||||
Sbjct: 1217 agggagcgctca 1228



 Score = 48.1 bits (24), Expect = 0.091
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 585 aagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaatcatc 640
           ||||||||||| |||||||| ||||| || |||||||| || ||||  ||||||||
Sbjct: 548 aagagaagacgtggtcgaacaccaacgcccggaaggtatctaggcacaaaatcatc 603

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>gb|AY105790.1| Zea mays PCO079761 mRNA sequence
          Length = 1402

 Score =  258 bits (130), Expect = 5e-65
 Identities = 259/302 (85%)
 Strand = Plus / Plus

                                                                       
Query: 76  aggtacaggagtcgttcaaggagtgtggactcgagtgatgttgagaaccctgggaacaat 135
           |||||| | ||||| || |||||||| ||||| ||||||| ||| |||||||||||||| 
Sbjct: 165 aggtaccgaagtcgctctaggagtgtcgactctagtgatgctgaaaaccctgggaacaac 224

                                                                       
Query: 136 ctctttgtgactggtttatcatctcgtctaactgatcgagatctggagaagcatttctct 195
           || | |||||||||||| ||  ||||| |||| |||||||||||||||||||| ||||| 
Sbjct: 225 ctgtatgtgactggtttgtcggctcgtgtaacggatcgagatctggagaagcacttctcc 284

                                                                       
Query: 196 acagagggagaggtgattgatgcaagtattgtacttgatccatggacaagggaatcacgg 255
           || ||||| |||||||||||||||||  ||||   |||||| ||||||||||||||||||
Sbjct: 285 actgagggtgaggtgattgatgcaagcgttgtgtatgatccttggacaagggaatcacgg 344

                                                                       
Query: 256 ggatttggatttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctc 315
           || ||||| ||||||||||||||   | |||| || ||||| ||||||||||||||||| 
Sbjct: 345 gggtttggttttgttaccatggctgctgttaaagatgcagatcgctgcatcaaatatctg 404

                                                                       
Query: 316 gacagttcagtgctggaaggtcgtgtcattactgttgagaagattttgttgacagcagca 375
           ||| |||| ||| || ||||||| ||||| ||||||||||||||||||||||||||| ||
Sbjct: 405 gaccgttctgtgttgcaaggtcgggtcataactgttgagaagattttgttgacagcaaca 464

             
Query: 376 gg 377
           ||
Sbjct: 465 gg 466



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 577 cacaggcaaagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaat 636
           ||||||||||||||||||||||| ||||||||||||| || | ||| |||||||  ||||
Sbjct: 659 cacaggcaaagagaagacgaggtagaaccccaacacctgggaagtatcttggcacaaaat 718

                              
Query: 637 catcgcgtcgaaggaggta 655
           |||| ||| || |||||||
Sbjct: 719 catcccgtggacggaggta 737



 Score = 50.1 bits (25), Expect = 0.023
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 834 tactctccctatggcagaaggagatcatactctcctt 870
           |||||||| |||| ||||||| |||||||||||||||
Sbjct: 826 tactctccatatgacagaaggcgatcatactctcctt 862



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1230 agccgcagttcatgctcgaggtccgtctccagggagcgctca 1271
            ||||||||||| | ||| ||||| || |||||||||||||||
Sbjct: 1219 agccgcagttcgtactccaggtctgtgtccagggagcgctca 1260

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>gb|BT018387.1| Zea mays clone EL01N0313G10.d mRNA sequence
          Length = 1493

 Score =  234 bits (118), Expect = 7e-58
 Identities = 241/282 (85%)
 Strand = Plus / Plus

                                                                       
Query: 76  aggtacaggagtcgttcaaggagtgtggactcgagtgatgttgagaaccctgggaacaat 135
           |||||| | ||||| || |||||||| ||||| ||||||| ||| |||||||||||||| 
Sbjct: 167 aggtaccgaagtcgctctaggagtgtcgactctagtgatgctgaaaaccctgggaacaac 226

                                                                       
Query: 136 ctctttgtgactggtttatcatctcgtctaactgatcgagatctggagaagcatttctct 195
           || | |||||||||||| ||| ||||| |||| |||||||||||||||||||| ||||| 
Sbjct: 227 ctgtatgtgactggtttgtcagctcgtgtaacggatcgagatctggagaagcacttctcc 286

                                                                       
Query: 196 acagagggagaggtgattgatgcaagtattgtacttgatccatggacaagggaatcacgg 255
           ||  |||| |||||||||||||||||  |||||  |||||| ||||||||||||||||||
Sbjct: 287 actaagggtgaggtgattgatgcaagcgttgtatatgatccttggacaagggaatcacgg 346

                                                                       
Query: 256 ggatttggatttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctc 315
           || ||||| ||||||||||||||   | |||| || ||||| ||||||||||||||||| 
Sbjct: 347 ggttttggttttgttaccatggctgctgttaaagatgcagatcgctgcatcaaatatctg 406

                                                     
Query: 316 gacagttcagtgctggaaggtcgtgtcattactgttgagaag 357
           ||| |||| ||| || ||||||| ||||| ||||||||||||
Sbjct: 407 gaccgttctgtgttgcaaggtcgggtcataactgttgagaag 448



 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                       
Query: 577 cacaggcaaagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaat 636
           ||||||||||||||||||| | | ||||||||||||| || | ||| |||||||  ||||
Sbjct: 776 cacaggcaaagagaagacgcgttagaaccccaacacctgggaagtatcttggcacaaaat 835

                              
Query: 637 catcgcgtcgaaggaggta 655
           |||| ||| || |||||||
Sbjct: 836 catcccgtggacggaggta 854



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 834 tactctccctatggcagaaggagatcatactctcc 868
           |||||||| |||| ||||||| |||||||||||||
Sbjct: 907 tactctccatatgacagaaggcgatcatactctcc 941

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  151 bits (76), Expect = 8e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                           
Query: 206     aggtgattgatgcaagtattgtacttgatccatggacaagggaatcacggggatttggat 265
               |||| |||||||| || || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 8739241 aggttattgatgctagcatagtacttgatccatggacaagggaatcccggggatttggat 8739182

                                                                           
Query: 266     ttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctcgacagttcag 325
               ||||||||||||| | | |||||||||| || |  |||||||||||||| ||| | ||||
Sbjct: 8739181 ttgttaccatggctactgttaaggaggctgatctttgcatcaaatatctagaccgctcag 8739122

                                               
Query: 326     tgctggaaggtcgtgtcattactgttgagaag 357
               || ||||||||||||| || ||||| ||||||
Sbjct: 8739121 tgttggaaggtcgtgtgataactgtagagaag 8739090



 Score =  109 bits (55), Expect = 3e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                           
Query: 955     accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 1014
               ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 8738271 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 8738212

                                                                           
Query: 1015    tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 1074
               ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 8738211 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 8738152

                                                      
Query: 1075    gcgtatcaccacgcaggagctactcccgtagctgctccc 1113
               | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 8738151 gtgtatcacctcagaggagctactcccatagctgttccc 8738113



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                           
Query: 97      agtgtggactcgagtgatgttgagaaccctgggaacaatctctttgtgactggtttatca 156
               ||||||||||| ||||||||||| |||||||||||||| || | ||| ||||| ||||| 
Sbjct: 8739421 agtgtggactcaagtgatgttgaaaaccctgggaacaacctgtatgttactggcttatct 8739362

                                                                    
Query: 157     tctcgtctaactgatcgagatctggagaagcatttctctacagagggagaggt 209
                ||||| | || ||||||||||||||||| || || ||| | |||||||||||
Sbjct: 8739361 gctcgtgtgacagatcgagatctggagaaacacttttctgctgagggagaggt 8739309



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                           
Query: 681     agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 740
               |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 8738536 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 8738477

                                                                           
Query: 741     agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 800
               ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 8738476 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 8738417

                                                                  
Query: 801     ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 851
                 ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 8738416 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 8738366



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 59/66 (89%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                           
Query: 401     tcaaattcaaaagatacacaacctaagatcgaaacaatgctacctcaaccaaagggttgt 460
               |||||||||||||||  ||||||||| | | ||||| |||||||||||||||||||||||
Sbjct: 8738938 tcaaattcaaaagatttacaacctaacagccaaaca-tgctacctcaaccaaagggttgt 8738880

                     
Query: 461     acgccc 466
               | ||||
Sbjct: 8738879 atgccc 8738874



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                           
Query: 1200    aagaggcgttctagagaaagctatgcgcacagccgcagttcatgctcgaggtccgtctcc 1259
               ||||||| |||||| || |||||  | |||||||||||||| | ||| ||||| ||||||
Sbjct: 8738032 aagaggcattctagggagagctactctcacagccgcagttcctactcaaggtctgtctcc 8737973

                           
Query: 1260    agggagcgctca 1271
               ||||||||||||
Sbjct: 8737972 agggagcgctca 8737961



 Score = 58.0 bits (29), Expect = 9e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                           
Query: 576     ccacaggcaaagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaa 635
               |||||||| ||||||||||| |||||||| ||||| || |||||||| || ||||  |||
Sbjct: 8738773 ccacaggccaagagaagacgtggtcgaacaccaacgcccggaaggtatctaggcacaaaa 8738714

                    
Query: 636     tcatc 640
               |||||
Sbjct: 8738713 tcatc 8738709

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>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score =  151 bits (76), Expect = 8e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                         
Query: 206   aggtgattgatgcaagtattgtacttgatccatggacaagggaatcacggggatttggat 265
             |||| |||||||| || || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 85057 aggttattgatgctagcatagtacttgatccatggacaagggaatcccggggatttggat 84998

                                                                         
Query: 266   ttgttaccatggccaatcttaaggaggcagaacgctgcatcaaatatctcgacagttcag 325
             ||||||||||||| | | |||||||||| || |  |||||||||||||| ||| | ||||
Sbjct: 84997 ttgttaccatggctactgttaaggaggctgatctttgcatcaaatatctagaccgctcag 84938

                                             
Query: 326   tgctggaaggtcgtgtcattactgttgagaag 357
             || ||||||||||||| || ||||| ||||||
Sbjct: 84937 tgttggaaggtcgtgtgataactgtagagaag 84906



 Score =  109 bits (55), Expect = 3e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                         
Query: 955   accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 1014
             ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 84087 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 84028

                                                                         
Query: 1015  tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 1074
             ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 84027 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 83968

                                                    
Query: 1075  gcgtatcaccacgcaggagctactcccgtagctgctccc 1113
             | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 83967 gtgtatcacctcagaggagctactcccatagctgttccc 83929



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                         
Query: 97    agtgtggactcgagtgatgttgagaaccctgggaacaatctctttgtgactggtttatca 156
             ||||||||||| ||||||||||| |||||||||||||| || | ||| ||||| ||||| 
Sbjct: 85237 agtgtggactcaagtgatgttgaaaaccctgggaacaacctgtatgttactggcttatct 85178

                                                                  
Query: 157   tctcgtctaactgatcgagatctggagaagcatttctctacagagggagaggt 209
              ||||| | || ||||||||||||||||| || || ||| | |||||||||||
Sbjct: 85177 gctcgtgtgacagatcgagatctggagaaacacttttctgctgagggagaggt 85125



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                         
Query: 681   agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 740
             |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 84352 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 84293

                                                                         
Query: 741   agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 800
             ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 84292 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 84233

                                                                
Query: 801   ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 851
               ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 84232 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 84182



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 59/66 (89%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                         
Query: 401   tcaaattcaaaagatacacaacctaagatcgaaacaatgctacctcaaccaaagggttgt 460
             |||||||||||||||  ||||||||| | | ||||| |||||||||||||||||||||||
Sbjct: 84754 tcaaattcaaaagatttacaacctaacagccaaaca-tgctacctcaaccaaagggttgt 84696

                   
Query: 461   acgccc 466
             | ||||
Sbjct: 84695 atgccc 84690



 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1200  aagaggcgttctagagaaagctatgcgcacagccgcagttcatgctcgaggtccgtctcc 1259
             ||||||| |||||| || |||||  | |||||||||||||| | ||| ||||| ||||||
Sbjct: 83848 aagaggcattctagggagagctactctcacagccgcagttcctactcaaggtctgtctcc 83789

                         
Query: 1260  agggagcgctca 1271
             ||||||||||||
Sbjct: 83788 agggagcgctca 83777



 Score = 58.0 bits (29), Expect = 9e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 576   ccacaggcaaagagaagacgaggtcgaaccccaacaccgggaaggtaccttggcagcaaa 635
             |||||||| ||||||||||| |||||||| ||||| || |||||||| || ||||  |||
Sbjct: 84589 ccacaggccaagagaagacgtggtcgaacaccaacgcccggaaggtatctaggcacaaaa 84530

                  
Query: 636   tcatc 640
             |||||
Sbjct: 84529 tcatc 84525

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>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete
             sequences
          Length = 148564

 Score = 46.1 bits (23), Expect = 0.36
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 472   tattttatttttctgtattattt 494
             |||||||||||||||||||||||
Sbjct: 39316 tattttatttttctgtattattt 39294

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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1164   agcaaggcatcgcgcagcaggtcacc 1189
              |||||||||||||||| |||||||||
Sbjct: 352179 agcaaggcatcgcgcaccaggtcacc 352154

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>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete sequence
          Length = 211170

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 471    ttattttatttttctgtattatttgt 496
              ||||||||||||| ||||||||||||
Sbjct: 162179 ttattttatttttatgtattatttgt 162154

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>gb|AY634267.1| Human coxsackievirus B1 isolate F16 VP1 gene, partial cds
          Length = 290

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 479 tttttctgtattatttgtgtag 500
           ||||||||||||||||||||||
Sbjct: 105 tttttctgtattatttgtgtag 84

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>gb|AC115055.9| Mus musculus chromosome 3, clone RP24-346I12, complete sequence
          Length = 204367

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 473    attttatttttctgtattattt 494
              ||||||||||||||||||||||
Sbjct: 110354 attttatttttctgtattattt 110375

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>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete
            sequence
          Length = 209276

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 471  ttattttatttttctgtattatttgt 496
            ||||||||||||| ||||||||||||
Sbjct: 9951 ttattttatttttatgtattatttgt 9976

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>gb|AC092962.4| Homo sapiens 3 BAC RP11-698E5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 174698

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 479    tttttctgtattatttgtgtag 500
              ||||||||||||||||||||||
Sbjct: 102448 tttttctgtattatttgtgtag 102469

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>emb|BX537319.9| Zebrafish DNA sequence from clone CH211-248N8 in linkage group 17,
             complete sequence
          Length = 48304

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 471   ttattttatttttctgtattatttgt 496
             ||||||||||||||| ||||||||||
Sbjct: 18800 ttattttatttttctttattatttgt 18825

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>emb|CR933786.10| Zebrafish DNA sequence from clone CH211-44M8 in linkage group 11,
             complete sequence
          Length = 50720

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1423  aaaaatgcagaaaatttccta 1443
             |||||||||||||||||||||
Sbjct: 23252 aaaaatgcagaaaatttccta 23272

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>emb|CT954290.4| N.leucogenys DNA sequence from clone CH271-224A19, complete sequence
          Length = 168568

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 472   tattttatttttctgtattatttgt 496
             |||||||||||||| ||||||||||
Sbjct: 44928 tattttatttttctctattatttgt 44904

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>gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, complete sequence
          Length = 211735

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 531    cttttgacataaaacacaatt 551
              |||||||||||||||||||||
Sbjct: 131215 cttttgacataaaacacaatt 131235

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>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence
          Length = 1108

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 250 tcacggggatttggatttgttaccatggc 278
           |||||||||||||| |||||||| |||||
Sbjct: 320 tcacggggatttggttttgttactatggc 292

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>gb|AC161440.8| Mus musculus chromosome 7, clone RP23-309B10, complete sequence
          Length = 181423

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 531   cttttgacataaaacacaatt 551
             |||||||||||||||||||||
Sbjct: 97630 cttttgacataaaacacaatt 97610

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>ref|XM_705696.1| Candida albicans SC5314 hypothetical protein (CaO19.3758), mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1368 tgtatttcgtcatcgttaacatctt 1392
            |||||||| ||||||||||||||||
Sbjct: 1190 tgtatttcttcatcgttaacatctt 1166

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>ref|XM_705683.1| Candida albicans SC5314 hypothetical protein (CaO19.11242), mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1368 tgtatttcgtcatcgttaacatctt 1392
            |||||||| ||||||||||||||||
Sbjct: 1190 tgtatttcttcatcgttaacatctt 1166

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>ref|XM_504178.1| Yarrowia lipolytica CLIB122, YALI0E20207g predicted mRNA
          Length = 1395

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  gaagacagagactcgagaggc 40
           |||||||||||||||||||||
Sbjct: 983 gaagacagagactcgagaggc 963

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>gb|AF351249.1| Gossypium hirsutum clone JESPR7 microsatellite sequence
          Length = 319

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 471 ttattttatttttctgtattatttgtgta 499
           |||||||| |||| |||||||||||||||
Sbjct: 70  ttattttaattttttgtattatttgtgta 42

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>gb|AC105748.2| Homo sapiens chromosome 3 clone RP11-532I6, complete sequence
          Length = 162258

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1121   agaagaatcaaggagctgttc 1141
              |||||||||||||||||||||
Sbjct: 102941 agaagaatcaaggagctgttc 102961

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>gb|AC104072.3| Homo sapiens BAC clone RP11-320H14 from 4, complete sequence
          Length = 112494

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 477    tatttttctgtattatttgtg 497
              |||||||||||||||||||||
Sbjct: 111209 tatttttctgtattatttgtg 111229

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>emb|AL022576.2|HS20J23 Human DNA sequence from clone RP1-20J23 on chromosome Xq26.2-27.2
             Contains a ras-related C3 botulinum toxin substrate 1 (rho
             family, small GTP binding protein Rac1) (RAC1) pseudogene
             (LOC286472) and a CpG island, complete sequence
          Length = 137111

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1385  aacatcttaaattgcagtctg 1405
             |||||||||||||||||||||
Sbjct: 99903 aacatcttaaattgcagtctg 99923

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>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 471    ttattttatttttctgtatta 491
              |||||||||||||||||||||
Sbjct: 144556 ttattttatttttctgtatta 144576

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>emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAII project)
          Length = 101715

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 471   ttattttatttttctgtatta 491
             |||||||||||||||||||||
Sbjct: 86515 ttattttatttttctgtatta 86495

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>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein
          Length = 1139

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 ggatttggatttgttaccatg 276
           |||||||||||||||||||||
Sbjct: 502 ggatttggatttgttaccatg 522

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>gb|AC093745.3| Homo sapiens BAC clone RP11-25B15 from 4, complete sequence
          Length = 166191

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 477    tatttttctgtattatttgtg 497
              |||||||||||||||||||||
Sbjct: 101947 tatttttctgtattatttgtg 101967

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>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete
              sequence
          Length = 252440

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 470    gttattttatttttctgtattattt 494
              |||||||||||||| ||||||||||
Sbjct: 150418 gttattttatttttatgtattattt 150394

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>dbj|BS000204.1| Pan troglodytes chromosome 22 clone:RP43-139K21, map 22, complete
              sequences
          Length = 148556

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 564    cccccttctccaccacaggca 584
              |||||||||||||||||||||
Sbjct: 121410 cccccttctccaccacaggca 121430

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>dbj|BS000115.1| Pan troglodytes chromosome 22 clone:PTB-047E23, map 22, complete
             sequences
          Length = 150496

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   cccccttctccaccacaggca 584
             |||||||||||||||||||||
Sbjct: 21698 cccccttctccaccacaggca 21718

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>dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, section 70/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   cccccttctccaccacaggca 584
             |||||||||||||||||||||
Sbjct: 86567 cccccttctccaccacaggca 86587

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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1268    ctcaacctcatcaagcacctg 1288
               |||||||||||||||||||||
Sbjct: 1782677 ctcaacctcatcaagcacctg 1782657

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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 20      gaagacagagactcgagaggc 40
               |||||||||||||||||||||
Sbjct: 2399129 gaagacagagactcgagaggc 2399109

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>gb|U44858.1|HSU44858 Human Down Syndrome region of chromosome 21, clone A11E6-2A10
          Length = 2153

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 564 cccccttctccaccacaggca 584
           |||||||||||||||||||||
Sbjct: 348 cccccttctccaccacaggca 328

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>dbj|AP000696.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB1572B10,
             CBR1-HLCS region
          Length = 163752

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   cccccttctccaccacaggca 584
             |||||||||||||||||||||
Sbjct: 23796 cccccttctccaccacaggca 23816

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>dbj|AP000695.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB176G8,
             CBR1-HLCS region
          Length = 100058

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   cccccttctccaccacaggca 584
             |||||||||||||||||||||
Sbjct: 74281 cccccttctccaccacaggca 74301

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>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 250 tcacggggatttggatttgttaccatggc 278
           |||||||||||||| |||||||| |||||
Sbjct: 898 tcacggggatttggttttgttactatggc 926


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 249,091,183
Number of extensions: 13989136
Number of successful extensions: 270181
Number of sequences better than 10.0: 41
Number of HSP's gapped: 270156
Number of HSP's successfully gapped: 73
Length of query: 1477
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1454
Effective length of database: 18,503,978,556
Effective search space: 26904784820424
Effective search space used: 26904784820424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result