ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf18c09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100646:Os06g0154900 | 139 | 3e-33 | 2 | AK065504:Os02g0244100 | 124 | 1e-28 | 3 | AK101097:Os06g0154900 | 52 | 5e-07 | 4 | AK103104:Os05g0487600 | 32 | 0.74 | 5 | AK100817:Os05g0487600 | 32 | 0.74 | 6 | AK059850:Os05g0487600 | 32 | 0.74 | 7 | AK119858: | 31 | 1.3 | 8 | AK107980:Os06g0681200 | 31 | 1.3 | 9 | Os08g0231600:Os08g0231600 | 31 | 1.7 | 10 | AK120222:Os07g0596300 | 31 | 1.7 | 11 | AK111453:Os04g0616200 | 30 | 2.2 | 12 | AK107230:Os08g0560000 | 30 | 2.8 | 13 | AK107117:Os08g0560000 | 30 | 2.8 | 14 | AK119581:Os09g0498600 | 30 | 3.7 | 15 | AK106593:Os07g0521300 | 30 | 3.7 | 16 | AK066995:Os09g0498600 | 30 | 3.7 | 17 | AK072027:Os04g0615900 | 30 | 3.7 | 18 | Os09g0129800:Os09g0129800 | 29 | 4.8 | 19 | Os08g0367000:Os08g0367000 | 29 | 4.8 | 20 | AK100169:Os06g0486000 | 29 | 4.8 | 21 | AK063263:Os04g0405500 | 29 | 4.8 | 22 | Os03g0745500:Os03g0745500 | 29 | 6.3 | 23 | AK111466:Os01g0578800 | 29 | 6.3 | 24 | Os03g0821200:Os03g0821200 | 28 | 8.2 | 25 | AK110199: | 28 | 8.2 | 26 | AK110145:Os09g0535200 | 28 | 8.2 | 27 | AK106898:Os07g0613300 | 28 | 8.2 | 28 | AK099895:Os07g0613300 | 28 | 8.2 | 29 | AK067398:Os07g0613300 | 28 | 8.2 |
|---|
>AK100646:Os06g0154900 | Length = 167 Score = 139 bits (351), Expect = 3e-33 Identities = 77/135 (57%), Positives = 90/135 (66%) Frame = +1 Query: 478 QCPYYKMLNYAVEYRGVKTKEEKGVEQIEGQRVIEAQIRMRHQELQDDAERLMNKQVAAS 657 +CPY KM +YAVEYRGVKTKEEKG EQIE QRVIEAQIRMR QELQDDAER+ KQ AA Sbjct: 3 RCPYCKMASYAVEYRGVKTKEEKGTEQIEEQRVIEAQIRMRQQELQDDAERMKKKQAAAL 62 Query: 658 TNEVTTARVEPYDXXXXXXXXXXXXQGNDAPSCQVNHSELLLKNAEGLTQLRMHWLTIFR 837 T+ VTTA+VE D QG+D S QV H+ELLLK +E L Q+R LT Sbjct: 63 TDVVTTAQVEHCDTGGASTTVKSSGQGSDMLSSQVQHAELLLKTSERLKQMRFVLLTELC 122 Query: 838 LLSCLTCVAMVASVN 882 L+ C + ++ N Sbjct: 123 LIFCKSSCLLLHQCN 137
>AK065504:Os02g0244100 | Length = 423 Score = 124 bits (311), Expect = 1e-28 Identities = 59/99 (59%), Positives = 74/99 (74%) Frame = +1 Query: 391 SLNRSKCCAKGICTECFL*MKSPTSRRPTQCPYYKMLNYAVEYRGVKTKEEKGVEQIEGQ 570 SLNRSKCC+KGICTECFL MK + +PTQCP+ K +YAVEYRGVKTKEE+ +EQ E Q Sbjct: 71 SLNRSKCCSKGICTECFLQMKPTHTAQPTQCPFCKTPSYAVEYRGVKTKEERSIEQFEEQ 130 Query: 571 RVIEAQIRMRHQELQDDAERLMNKQVAASTNEVTTARVE 687 +VIEAQ+RMR Q LQD+ +++ KQ S++ T E Sbjct: 131 KVIEAQMRMRQQALQDEEDKMKRKQNRCSSSRTITPTKE 169
>AK101097:Os06g0154900 | Length = 121 Score = 52.4 bits (124), Expect = 5e-07 Identities = 25/39 (64%), Positives = 30/39 (76%) Frame = +3 Query: 393 PQPVKVLRQGDLHRVLPLDEVAHIPPADTVSVLQDAELR 509 PQPV+VLRQG+LH V DE AH+ PAD V +LQ+ ELR Sbjct: 82 PQPVQVLRQGNLHGVFSPDEDAHLVPADAVPLLQNGELR 120
>AK103104:Os05g0487600 | Length = 126 Score = 32.0 bits (71), Expect = 0.74 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Frame = +3 Query: 6 PPTPSSVAATQHRRPP-SSPTTGVL--VSHLAPTHSSSPHLTFYSYPKLQINRGACHGVP 176 PP P V + RRPP +SP T SH AP T S P +C Sbjct: 32 PPAPPPVLTSPQRRPPPASPPTPAAPPPSHTAPLSPFESTSTTRSSP-----FHSCR--- 83 Query: 177 DPPCSPGASSTWASGDGG 230 CSP A +T SG GG Sbjct: 84 ---CSPVAGATSPSGSGG 98
>AK100817:Os05g0487600 | Length = 126 Score = 32.0 bits (71), Expect = 0.74 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Frame = +3 Query: 6 PPTPSSVAATQHRRPP-SSPTTGVL--VSHLAPTHSSSPHLTFYSYPKLQINRGACHGVP 176 PP P V + RRPP +SP T SH AP T S P +C Sbjct: 32 PPAPPPVLTSPQRRPPPASPPTPAAPPPSHTAPLSPFESTSTTRSSP-----FHSCR--- 83 Query: 177 DPPCSPGASSTWASGDGG 230 CSP A +T SG GG Sbjct: 84 ---CSPVAGATSPSGSGG 98
>AK059850:Os05g0487600 | Length = 106 Score = 32.0 bits (71), Expect = 0.74 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Frame = +3 Query: 6 PPTPSSVAATQHRRPP-SSPTTGVL--VSHLAPTHSSSPHLTFYSYPKLQINRGACHGVP 176 PP P V + RRPP +SP T SH AP T S P +C Sbjct: 12 PPAPPPVLTSPQRRPPPASPPTPAAPPPSHTAPLSPFESTSTTRSSP-----FHSCR--- 63 Query: 177 DPPCSPGASSTWASGDGG 230 CSP A +T SG GG Sbjct: 64 ---CSPVAGATSPSGSGG 78
>AK119858: | Length = 276 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +3 Query: 3 APPTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHG-VPD 179 APP P RR +SP T SH + T S++ P+ R C G P Sbjct: 120 APPKP--------RRRRTSPATPATRSHFSTTSSATQRTRPPKGPRSASVRSGCDGDAPS 171 Query: 180 PPC-SPGASSTW 212 P SP AS++W Sbjct: 172 TPSGSPHASASW 183
>AK107980:Os06g0681200 | Length = 279 Score = 31.2 bits (69), Expect = 1.3 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Frame = +3 Query: 3 APPTPSSVAATQHRRP------PS-SPTTGVLVSHLAPTHS--SSPHLTFYSYPKLQINR 155 +PP+P+ AAT P PS SP+ + APT S SSP P Sbjct: 163 SPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSPSTTP 222 Query: 156 GACHGVPDPPCSPGASST 209 G P PP + GA++T Sbjct: 223 GGVAQPPPPPGTDGANAT 240
>Os08g0231600:Os08g0231600 | Length = 64 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 6/67 (8%) Frame = +3 Query: 15 PSSVAATQHRRPPSSP------TTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHGVP 176 P+SV+A RRPPS P TG L P SP L GA +P Sbjct: 4 PASVSAAAGRRPPSPPPPGAAHRTGFLPLRRLPCRHPSPSLP---------GAGAVDPLP 54 Query: 177 DPPCSPG 197 P PG Sbjct: 55 PAPLGPG 61
>AK120222:Os07g0596300 | Length = 754 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/66 (33%), Positives = 24/66 (36%) Frame = +3 Query: 3 APPTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHGVPDP 182 APP P T PP P + S P+ P S P GA G P P Sbjct: 141 APPPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPPP-----SPPPPPPPPGARPGPPPP 195 Query: 183 PCSPGA 200 P PGA Sbjct: 196 PPPPGA 201
>AK111453:Os04g0616200 | Length = 328 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = +3 Query: 39 HRRPPSSPTTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHGVPDPPCSPGASSTWAS 218 H+RPP S +L T ++ + QI G+CH AS+ +S Sbjct: 240 HKRPPMSKVVSMLTGDADITEDAAKPSYITEW---QIKVGSCHHTGSSQVG-SASTPPSS 295 Query: 219 GDGGARTRGDEG 254 GDGGA +G Sbjct: 296 GDGGAGQASSQG 307
>AK107230:Os08g0560000 | Length = 383 Score = 30.0 bits (66), Expect = 2.8 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Frame = -2 Query: 926 QYFN*ALSRELNNPQLTDATIATQVKQDRRRKMVNQCIRNCVNPSAFFNSSSEW-FTWHE 750 Q N + E+ L A ++ Q R + ++ +R V FN + W + Sbjct: 112 QVVNHGVGGEVVGGMLDVARRFFELPQPERERYMSADVRAPVRYGTSFNQVRDAVLCWRD 171 Query: 749 GASLPWAPLAAEVDVPPVS*GSTRAVVTSFVEAATCLFM 633 L PLAA V+ P S R V + + EA +FM Sbjct: 172 FLKLACMPLAAVVESWPTSPADLREVASRYAEANQRVFM 210
>AK107117:Os08g0560000 | Length = 383 Score = 30.0 bits (66), Expect = 2.8 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Frame = -2 Query: 926 QYFN*ALSRELNNPQLTDATIATQVKQDRRRKMVNQCIRNCVNPSAFFNSSSEW-FTWHE 750 Q N + E+ L A ++ Q R + ++ +R V FN + W + Sbjct: 112 QVVNHGVGGEVVGGMLDVARRFFELPQPERERYMSADVRAPVRYGTSFNQVRDAVLCWRD 171 Query: 749 GASLPWAPLAAEVDVPPVS*GSTRAVVTSFVEAATCLFM 633 L PLAA V+ P S R V + + EA +FM Sbjct: 172 FLKLACMPLAAVVESWPTSPADLREVASRYAEANQRVFM 210
>AK119581:Os09g0498600 | Length = 398 Score = 29.6 bits (65), Expect = 3.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 4 HHQHLQVSPPPNTGGLRPLPQPAY 75 HH + +PP TGG+ P P P++ Sbjct: 209 HHPRQEPAPPHPTGGMPPYPMPSF 232
>AK106593:Os07g0521300 | Length = 482 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/56 (28%), Positives = 33/56 (58%) Frame = +1 Query: 778 LLKNAEGLTQLRMHWLTIFRLLSCLTCVAMVASVNCGLLSSLDKAQLKYCNYCWFI 945 +++ +T+ + +LT + L +C A+ +S++ LSSL + LKYC++ + I Sbjct: 154 IVQGHTSITKKWLQYLTSLQELEIYSCHALPSSLSS--LSSLRRCTLKYCHWMYSI 207
>AK066995:Os09g0498600 | Length = 616 Score = 29.6 bits (65), Expect = 3.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 4 HHQHLQVSPPPNTGGLRPLPQPAY 75 HH + +PP TGG+ P P P++ Sbjct: 427 HHPRQEPAPPHPTGGMPPYPMPSF 450
>AK072027:Os04g0615900 | Length = 684 Score = 29.6 bits (65), Expect = 3.7 Identities = 24/73 (32%), Positives = 32/73 (43%) Frame = +3 Query: 9 PTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHGVPDPPC 188 PTPSS A+ Q R+P S +SH+ T +L S PK + R A P P Sbjct: 17 PTPSSSASAQPRQPASR------ISHIVRT-----YLDLSSNPKKR--RAAPKSHPKPAA 63 Query: 189 SPGASSTWASGDG 227 + +GDG Sbjct: 64 AAAGQGAPDAGDG 76
>Os09g0129800:Os09g0129800 | Length = 577 Score = 29.3 bits (64), Expect = 4.8 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +3 Query: 39 HRRPPSSPTTGVLV 80 HRRPPSSP TGV + Sbjct: 532 HRRPPSSPPTGVFI 545
>Os08g0367000:Os08g0367000 | Length = 2245 Score = 29.3 bits (64), Expect = 4.8 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +3 Query: 39 HRRPPSSPTTGVLV 80 HRRPPSSP TGV + Sbjct: 1837 HRRPPSSPPTGVFI 1850
>AK100169:Os06g0486000 | Length = 748 Score = 29.3 bits (64), Expect = 4.8 Identities = 22/76 (28%), Positives = 28/76 (36%) Frame = +3 Query: 3 APPTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHGVPDP 182 +PP PS ++ H PP +P P SSS + S G P+ Sbjct: 75 SPPPPSGSSSESHSSPPPAP----------PQSSSSSSSSSSS-------GGGSKSSPEA 117 Query: 183 PCSPGASSTWASGDGG 230 P P SS G GG Sbjct: 118 PSPPSESSGNGGGGGG 133
>AK063263:Os04g0405500 | Length = 299 Score = 29.3 bits (64), Expect = 4.8 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Frame = +3 Query: 39 HRRPPSSPTTGVLVSHLAPTHSSSPHLTFYSYPKLQINRGACHGV-----PDPPCSPGAS 203 HR P + G L +HL HS++ + Y Q +R C G PP P +S Sbjct: 169 HREPKPKSSAGAL-AHLGGNHSAAGNGDDDEYESTQQHRIKCAGFFGGLGAAPP--PTSS 225 Query: 204 STWASGDGGA 233 S W S GA Sbjct: 226 SYWLSAADGA 235
>Os03g0745500:Os03g0745500 | Length = 305 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +3 Query: 165 HGVPDPPCSPGASSTWASGDGGARTRGDEG 254 H PP P A + A G G TRGDEG Sbjct: 56 HDPVPPPTQPFAPALEAVGASGCATRGDEG 85
>AK111466:Os01g0578800 | Length = 205 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 3 APPTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSSS 110 AP P++ AT P S P TG +P SSS Sbjct: 20 APAPPAAATATSSAAPASPPATGSCTRRSSPAASSS 55
>Os03g0821200:Os03g0821200 | Length = 414 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 329 GGALRLIGRAGPVPAQRTQASSKQAAFISSSASTSVTGG 213 GGALR + G + SSK ++ S++ S S TGG Sbjct: 155 GGALRNVPVGGGCRRNKRTKSSKSSSSTSAAGSASATGG 193
>AK110199: | Length = 1093 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +3 Query: 9 PTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSS 107 P +S +++ HR PS P +H+A T+SS Sbjct: 88 PANNSTSSSPHRESPSRPPRQATSTHMASTNSS 120
>AK110145:Os09g0535200 | Length = 861 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 3 APPTPSSVAATQHRRPPSSPTTGVLVSHLAPTHSSSPHLTFYS 131 APP P+ A T H P +P T + + P + SP T +S Sbjct: 270 APPAPTPPAPTFHVPTPPTPATPAPPADVPPGFTVSPTTTCHS 312
>AK106898:Os07g0613300 | Length = 980 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 750 LMPSKPFGAAIEECRRVNAVAYALV--NHFPPSILLNLCGYGCIS 878 L P AA R A+AY + PPS LL+LC YG S Sbjct: 10 LASDSPAAAAASPAVRAEALAYCARARDETPPSSLLHLCLYGLAS 54
>AK099895:Os07g0613300 | Length = 980 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 750 LMPSKPFGAAIEECRRVNAVAYALV--NHFPPSILLNLCGYGCIS 878 L P AA R A+AY + PPS LL+LC YG S Sbjct: 10 LASDSPAAAAASPAVRAEALAYCARARDETPPSSLLHLCLYGLAS 54
>AK067398:Os07g0613300 | Length = 980 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 750 LMPSKPFGAAIEECRRVNAVAYALV--NHFPPSILLNLCGYGCIS 878 L P AA R A+AY + PPS LL+LC YG S Sbjct: 10 LASDSPAAAAASPAVRAEALAYCARARDETPPSSLLHLCLYGLAS 54 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,592,057 Number of extensions: 529747 Number of successful extensions: 2714 Number of sequences better than 10.0: 29 Number of HSP's gapped: 2686 Number of HSP's successfully gapped: 29 Length of query: 348 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 246 Effective length of database: 11,315,673 Effective search space: 2783655558 Effective search space used: 2783655558 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
