ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf18c07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051695.1| Oryza sativa (japonica cultivar-group) Os01g0911300 (Os01g0911300) mRNA, complete cds Length = 1499 Score = 1128 bits (569), Expect = 0.0 Identities = 905/1017 (88%) Strand = Plus / Plus Query: 664 aagtggctggataagctgtatgatgtgagctttcgacaaacaatggcttatggaggctgg 723 |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 10 aagtggctagataagctatatgatgtaagctttcggcaaacaatggcttatggaggctgg 69 Query: 724 agcttgagcttgaactatctgtaccattctactcaggtccttgcagttttgattggagga 783 |||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 70 agcttgagtttgaactatctataccattctactcaggtcattgcagtgttgattggaggg 129 Query: 784 atagcaatcatgaatgggaagttcactgctgagcaactgacaaaattcacactgtatgcc 843 ||| | |||||| ||||||| | ||||||||||||||||||||||||| ||| ||||| Sbjct: 130 atatccatcatggctgggaagctaactgctgagcaactgacaaaattcatactctatgct 189 Query: 844 gagtggctgattttgtcaacctggtggattggagacaattggtcctccctgatgcagtct 903 |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 190 gagtggctaattttgtcaacatggtggattggagacaactggtcctctctgatgcagtct 249 Query: 904 gttggagcaagtgaaaaagtcttccggttgatggatctcttacctagcaagcagcttacc 963 ||||||||||||||||| |||||||| ||||||||||| | ||||||| ||||||| Sbjct: 250 gttggagcaagtgaaaaggtcttccgtttgatggatctacttcctagcagacagcttagt 309 Query: 964 tctaaaggcctcaggttacagaagctggaaggacggattcaatatgcaaatgtagaattt 1023 ||| |||||| ||||||||||||| ||||||| |||||||| ||||| ||||| |||| Sbjct: 310 tctgaaggccacaggttacagaagttggaaggccggattcagtatgccgatgtatcattt 369 Query: 1024 tcatatccttcaagaccttcagcgcctattttgagaagactgaatctaacactcaaccca 1083 |||||||| ||||||||| | | || ||| || | || ||||||||||||| | ||| Sbjct: 370 tcatatccatcaagacctacggtaccaattctgggtggattgaatctaacacttcatcca 429 Query: 1084 aatgaagtggttgcaattgttggtcttagtggaagtgggaagagtactatagttaaccta 1143 |||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 430 aatgaagtagttgcaattgttggtcttagtggaagtggaaagagtactgtagttaaccta 489 Query: 1144 ctgcttcagctatatgaacctacaaatgggcaaatattaatagatggtgtcccactcagc 1203 || |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 490 ctacttcggctatatgaacctacagatgggcaaatattagtagatggtgtcccactcagt 549 Query: 1204 gagcttgacactagatggttcagggaaagaattggttttgtgggacaggagcctaagcta 1263 |||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||| Sbjct: 550 gagcttgacatcagatggttcagggaaaggattggttttgttggacaggaacctaggcta 609 Query: 1264 ttccgaatggatgttagttctaatattaagtatggctgcccaagagaagttagccaggaa 1323 |||||||||||| ||||||||||||||| |||||| || ||||||||||||||| | ||| Sbjct: 610 ttccgaatggatattagttctaatattaggtatggttgtccaagagaagttagcaatgaa 669 Query: 1324 gaagttgagtgggctgcaaaacaggcttatgctcacgatttcatattggctcttccagat 1383 ||||| |||||||||||||| ||||| |||||||||||||||||| || |||| || ||| Sbjct: 670 gaagtggagtgggctgcaaagcaggcatatgctcacgatttcataatgtctctccctgat 729 Query: 1384 ggttataacacaattgtcgacgatgctcttcttagtggaggccaaaagcaacgtgttgct 1443 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 730 ggttataacaccattgtcgatgatgctcttcttagtggaggccaaaagcaacgcgttgct 789 Query: 1444 attgcaagggcccttctgagggacccggcgatcttagtactcgacgaagccactagtgcg 1503 ||||| ||||||||||| |||||||| | ||||| ||| | || |||||||||||||| Sbjct: 790 attgcgagggcccttcttagggacccatccatcttggtattagatgaagccactagtgca 849 Query: 1504 cttgatgctgagagtgaacattatgtgaagagtgtcataacagaagttagcactgatcct 1563 ||||||||||||||||||||||||||||||| ||| || ||| | |||| ||||||||| Sbjct: 850 cttgatgctgagagtgaacattatgtgaagaatgtaatcacaaagtttagtactgatcct 909 Query: 1564 aaggctcgaagaaccgtgattatcatagctcacaggctgtctacgattcaagcggctgat 1623 |||||| ||||||||||||| |||||||||||||| || ||||| ||||||||||||||| Sbjct: 910 aaggctagaagaaccgtgatcatcatagctcacagactatctacaattcaagcggctgat 969 Query: 1624 agaattattgtgatggaaaatggtagcatcgtggaggacggaaagcacagcgagctt 1680 |||||||| |||||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 970 agaattatcgtgatggaaaatggtaatattgtggaggatggaaaccacagcgagctt 1026
>dbj|AK058462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A04, full insert sequence Length = 1506 Score = 1128 bits (569), Expect = 0.0 Identities = 905/1017 (88%) Strand = Plus / Plus Query: 664 aagtggctggataagctgtatgatgtgagctttcgacaaacaatggcttatggaggctgg 723 |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 17 aagtggctagataagctatatgatgtaagctttcggcaaacaatggcttatggaggctgg 76 Query: 724 agcttgagcttgaactatctgtaccattctactcaggtccttgcagttttgattggagga 783 |||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||| Sbjct: 77 agcttgagtttgaactatctataccattctactcaggtcattgcagtgttgattggaggg 136 Query: 784 atagcaatcatgaatgggaagttcactgctgagcaactgacaaaattcacactgtatgcc 843 ||| | |||||| ||||||| | ||||||||||||||||||||||||| ||| ||||| Sbjct: 137 atatccatcatggctgggaagctaactgctgagcaactgacaaaattcatactctatgct 196 Query: 844 gagtggctgattttgtcaacctggtggattggagacaattggtcctccctgatgcagtct 903 |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 197 gagtggctaattttgtcaacatggtggattggagacaactggtcctctctgatgcagtct 256 Query: 904 gttggagcaagtgaaaaagtcttccggttgatggatctcttacctagcaagcagcttacc 963 ||||||||||||||||| |||||||| ||||||||||| | ||||||| ||||||| Sbjct: 257 gttggagcaagtgaaaaggtcttccgtttgatggatctacttcctagcagacagcttagt 316 Query: 964 tctaaaggcctcaggttacagaagctggaaggacggattcaatatgcaaatgtagaattt 1023 ||| |||||| ||||||||||||| ||||||| |||||||| ||||| ||||| |||| Sbjct: 317 tctgaaggccacaggttacagaagttggaaggccggattcagtatgccgatgtatcattt 376 Query: 1024 tcatatccttcaagaccttcagcgcctattttgagaagactgaatctaacactcaaccca 1083 |||||||| ||||||||| | | || ||| || | || ||||||||||||| | ||| Sbjct: 377 tcatatccatcaagacctacggtaccaattctgggtggattgaatctaacacttcatcca 436 Query: 1084 aatgaagtggttgcaattgttggtcttagtggaagtgggaagagtactatagttaaccta 1143 |||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 437 aatgaagtagttgcaattgttggtcttagtggaagtggaaagagtactgtagttaaccta 496 Query: 1144 ctgcttcagctatatgaacctacaaatgggcaaatattaatagatggtgtcccactcagc 1203 || |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 497 ctacttcggctatatgaacctacagatgggcaaatattagtagatggtgtcccactcagt 556 Query: 1204 gagcttgacactagatggttcagggaaagaattggttttgtgggacaggagcctaagcta 1263 |||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||| Sbjct: 557 gagcttgacatcagatggttcagggaaaggattggttttgttggacaggaacctaggcta 616 Query: 1264 ttccgaatggatgttagttctaatattaagtatggctgcccaagagaagttagccaggaa 1323 |||||||||||| ||||||||||||||| |||||| || ||||||||||||||| | ||| Sbjct: 617 ttccgaatggatattagttctaatattaggtatggttgtccaagagaagttagcaatgaa 676 Query: 1324 gaagttgagtgggctgcaaaacaggcttatgctcacgatttcatattggctcttccagat 1383 ||||| |||||||||||||| ||||| |||||||||||||||||| || |||| || ||| Sbjct: 677 gaagtggagtgggctgcaaagcaggcatatgctcacgatttcataatgtctctccctgat 736 Query: 1384 ggttataacacaattgtcgacgatgctcttcttagtggaggccaaaagcaacgtgttgct 1443 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 737 ggttataacaccattgtcgatgatgctcttcttagtggaggccaaaagcaacgcgttgct 796 Query: 1444 attgcaagggcccttctgagggacccggcgatcttagtactcgacgaagccactagtgcg 1503 ||||| ||||||||||| |||||||| | ||||| ||| | || |||||||||||||| Sbjct: 797 attgcgagggcccttcttagggacccatccatcttggtattagatgaagccactagtgca 856 Query: 1504 cttgatgctgagagtgaacattatgtgaagagtgtcataacagaagttagcactgatcct 1563 ||||||||||||||||||||||||||||||| ||| || ||| | |||| ||||||||| Sbjct: 857 cttgatgctgagagtgaacattatgtgaagaatgtaatcacaaagtttagtactgatcct 916 Query: 1564 aaggctcgaagaaccgtgattatcatagctcacaggctgtctacgattcaagcggctgat 1623 |||||| ||||||||||||| |||||||||||||| || ||||| ||||||||||||||| Sbjct: 917 aaggctagaagaaccgtgatcatcatagctcacagactatctacaattcaagcggctgat 976 Query: 1624 agaattattgtgatggaaaatggtagcatcgtggaggacggaaagcacagcgagctt 1680 |||||||| |||||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 977 agaattatcgtgatggaaaatggtaatattgtggaggatggaaaccacagcgagctt 1033
>gb|AY110919.1| Zea mays CL34933_1 mRNA sequence Length = 1046 Score = 373 bits (188), Expect = 2e-99 Identities = 499/600 (83%), Gaps = 2/600 (0%) Strand = Plus / Minus Query: 1175 aaatattaatagatggtgtcccactcagcgagcttgacactagatggttcagggaaagaa 1234 ||||| |||| ||||||||||| |||| |||||||| | ||||||||||||||||||| Sbjct: 1046 aaatactaattgatggtgtcccgctcactgagcttgatatcagatggttcagggaaagaa 987 Query: 1235 ttggttttgtgggacaggagcctaagct-attccgaatggatgttagttctaatattaag 1293 ||||||| || |||||||| || | ||| ||||||||||||| | || ||||||||||| Sbjct: 986 ttggtttcgtcggacaggaacc-acgcttattccgaatggatatcagctctaatattaaa 928 Query: 1294 tatggctgcccaagagaagttagccaggaagaagttgagtgggctgcaaaacaggcttat 1353 ||||| ||||||||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 927 tatggttgcccaagagatgtcagtcatgaagaagtgatatgggctgcaaagcaggcctat 868 Query: 1354 gctcacgatttcatattggctcttccagatggttataacacaattgtcgacgatgctctt 1413 ||||| || |||||| ||||| | || |||||||||||||| || || || ||||||||| Sbjct: 867 gctcatgacttcataatggctttgcctgatggttataacaccatcgttgatgatgctctt 808 Query: 1414 cttagtggaggccaaaagcaacgtgttgctattgcaagggcccttctgagggacccggcg 1473 || |||||||| || || ||||||||||||||||| |||||||||||||||||||| | Sbjct: 807 ctcagtggaggtcagaaacaacgtgttgctattgccagggcccttctgagggacccatct 748 Query: 1474 atcttagtactcgacgaagccactagtgcgcttgatgctgagagtgaacattatgtgaag 1533 |||||| | || || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 747 atcttactgcttgatgaagccactagtgcgcttgatgctgagagtgaacattatgtcaag 688 Query: 1534 agtgtcataacagaagttagcactgatcctaaggctcgaagaaccgtgattatcatagct 1593 || ||||| ||| ||||||| ||| | |||||| |||||| ||| | |||||||| Sbjct: 687 agcgtcatcacaaaagttagtcgagattcaaaggctaaaagaactgtggtaatcatagca 628 Query: 1594 cacaggctgtctacgattcaagcggctgatagaattattgtgatggaaaatggtagcatc 1653 |||||||| ||||| |||||| | ||||||||||||||||||||||||||||||| || Sbjct: 627 cacaggctatctacaattcaaacagctgatagaattattgtgatggaaaatggtaatatt 568 Query: 1654 gtggaggacggaaagcacagcgagcttgtcaagcagaatggattgtattcaagattagca 1713 |||||||| || || |||| || ||| | || || ||| | |||||||||||||| Sbjct: 567 gtggaggatggtaaacacattgatcttattgagaagggtggtctatattcaagattagcc 508 Query: 1714 cagcgacaaaatgatgctctcccgtagcctgaaatcacagaatgtggtttagtccacgcc 1773 |||||||||||| | |||| |||||| |||||||||||||||||||| |||||| Sbjct: 507 aggcgacaaaatgacgatctcaagtagccctggatcacagaatgtggtttagtgcacgcc 448
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 343 bits (173), Expect = 2e-90 Identities = 257/285 (90%) Strand = Plus / Minus Query: 1249 caggagcctaagctattccgaatggatgttagttctaatattaagtatggctgcccaaga 1308 ||||| |||| |||||||||||||||| ||||||||||||||| |||||| || |||||| Sbjct: 39697863 caggaacctaggctattccgaatggatattagttctaatattaggtatggttgtccaaga 39697804 Query: 1309 gaagttagccaggaagaagttgagtgggctgcaaaacaggcttatgctcacgatttcata 1368 ||||||||| | |||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 39697803 gaagttagcaatgaagaagtggagtgggctgcaaagcaggcatatgctcacgatttcata 39697744 Query: 1369 ttggctcttccagatggttataacacaattgtcgacgatgctcttcttagtggaggccaa 1428 || |||| || |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 39697743 atgtctctccctgatggttataacaccattgtcgatgatgctcttcttagtggaggccaa 39697684 Query: 1429 aagcaacgtgttgctattgcaagggcccttctgagggacccggcgatcttagtactcgac 1488 |||||||| ||||||||||| ||||||||||| |||||||| | ||||| ||| | || Sbjct: 39697683 aagcaacgcgttgctattgcgagggcccttcttagggacccatccatcttggtattagat 39697624 Query: 1489 gaagccactagtgcgcttgatgctgagagtgaacattatgtgaag 1533 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 39697623 gaagccactagtgcacttgatgctgagagtgaacattatgtgaag 39697579 Score = 222 bits (112), Expect = 4e-54 Identities = 166/184 (90%) Strand = Plus / Minus Query: 758 aggtccttgcagttttgattggaggaatagcaatcatgaatgggaagttcactgctgagc 817 ||||| ||||||| ||||||||||| ||| | |||||| ||||||| | |||||||||| Sbjct: 39699067 aggtcattgcagtgttgattggagggatatccatcatggctgggaagctaactgctgagc 39699008 Query: 818 aactgacaaaattcacactgtatgccgagtggctgattttgtcaacctggtggattggag 877 ||||||||||||||| ||| ||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 39699007 aactgacaaaattcatactctatgctgagtggctaattttgtcaacatggtggattggag 39698948 Query: 878 acaattggtcctccctgatgcagtctgttggagcaagtgaaaaagtcttccggttgatgg 937 |||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 39698947 acaactggtcctctctgatgcagtctgttggagcaagtgaaaaggtcttccgtttgatgg 39698888 Query: 938 atct 941 |||| Sbjct: 39698887 atct 39698884 Score = 170 bits (86), Expect = 1e-38 Identities = 116/126 (92%) Strand = Plus / Minus Query: 302 aggatattgcttttttcgatgaagaaactgtcggtgatttgacaagtaggcttggttctg 361 |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 39700151 aggacattgctttttttgatgaagaaactgttggtgatttgacaagtaggcttggttctg 39700092 Query: 362 actgccagcaagtgtctagagttattggcaatgatcttaatttgatttcgcgcaatttgc 421 |||||||||||||||| |||| |||||||||||||||||| | || || |||||||||| Sbjct: 39700091 actgccagcaagtgtcacgagtcattggcaatgatcttaatcttatctcacgcaatttgc 39700032 Query: 422 ttcagg 427 |||||| Sbjct: 39700031 ttcagg 39700026 Score = 147 bits (74), Expect = 2e-31 Identities = 92/98 (93%) Strand = Plus / Minus Query: 664 aagtggctggataagctgtatgatgtgagctttcgacaaacaatggcttatggaggctgg 723 |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 39699307 aagtggctagataagctatatgatgtaagctttcggcaaacaatggcttatggaggctgg 39699248 Query: 724 agcttgagcttgaactatctgtaccattctactcaggt 761 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 39699247 agcttgagtttgaactatctataccattctactcaggt 39699210 Score = 133 bits (67), Expect = 3e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 90 gctctcggagatcgctatcccccatctgctcgcggcctccatcttctccgcgcagaatgg 149 |||| |||||||||| || |||||||| ||||| || ||||||||||| |||||||| || Sbjct: 39701161 gctcgcggagatcgcgataccccatctcctcgcagcgtccatcttctcggcgcagaacgg 39701102 Query: 150 aggcgccgtcttctaccggaacgccaagctcctggttgttctctgtttgatttccggagt 209 ||| || || |||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 39701101 aggggctgtgttctaccggaacgctaagcttctggttgttctgtgtttgatttccggagt 39701042 Query: 210 gtt 212 ||| Sbjct: 39701041 gtt 39701039 Score = 119 bits (60), Expect = 5e-23 Identities = 99/112 (88%) Strand = Plus / Minus Query: 422 ttcagggtataggagcactgatttatcttctaatcttatcatggcctcttggactgtgca 481 |||||||| |||| ||||| |||||||| ||| ||||||| ||||| |||||| |||||| Sbjct: 39699947 ttcagggtgtaggcgcactaatttatctgctagtcttatcttggccacttggaatgtgca 39699888 Query: 482 ctatgcttacttgtgggacattgtcgacaattatgctagttcatggacggta 533 ||||| | | ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 39699887 ctatgttgatttgtgcgacattgtcgaccattatgctagttcatggacggta 39699836 Score = 109 bits (55), Expect = 4e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 1102 gttggtcttagtggaagtgggaagagtactatagttaacctactgcttcagctatatgaa 1161 |||||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||| Sbjct: 39698195 gttggtcttagtggaagtggaaagagtactgtagttaacctactacttcggctatatgaa 39698136 Query: 1162 cctacaaatgggcaa 1176 |||||| |||||||| Sbjct: 39698135 cctacagatgggcaa 39698121 Score = 103 bits (52), Expect = 3e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 1177 atattaatagatggtgtcccactcagcgagcttgacactagatggttcagggaaagaatt 1236 |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 39698012 atattagtagatggtgtcccactcagtgagcttgacatcagatggttcagggaaaggatt 39697953 Query: 1237 ggttttgtgggacagg 1252 |||||||| ||||||| Sbjct: 39697952 ggttttgttggacagg 39697937 Score = 75.8 bits (38), Expect = 6e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1603 tctacgattcaagcggctgatagaattattgtgatggaaaatggta 1648 ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 39697336 tctacaattcaagcggctgatagaattatcgtgatggaaaatggta 39697291 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1550 ttagcactgatcctaaggctcgaagaaccgtgattatcatagctcacagg 1599 |||| ||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 39697463 ttagtactgatcctaaggctagaagaaccgtgatcatcatagctcacagg 39697414 Score = 73.8 bits (37), Expect = 2e-09 Identities = 64/73 (87%) Strand = Plus / Minus Query: 969 aggcctcaggttacagaagctggaaggacggattcaatatgcaaatgtagaattttcata 1028 ||||| ||||||||||||| ||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 39698728 aggccacaggttacagaagttggaaggccggattcagtatgccgatgtatcattttcata 39698669 Query: 1029 tccttcaagacct 1041 ||| ||||||||| Sbjct: 39698668 tccatcaagacct 39698656 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 213 cagtggcgtgcgaagctgctgttttggtattgccaacatgatattggttaaac 265 |||||| ||||||||||||||||||||| |||| |||||||||||||| |||| Sbjct: 39700472 cagtggtgtgcgaagctgctgttttggtgttgcaaacatgatattggtaaaac 39700420 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 262 aaacgaatgagagaaatgctatttgattccatcctttctcagg 304 |||||||||||||||||||| |||||||| || |||||||||| Sbjct: 39700317 aaacgaatgagagaaatgctgtttgattctattctttctcagg 39700275 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 550 aaattcgcacaagagttcactgcaagtgccaataatgt 587 ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 39699643 aaatttgcacaggagttcactgcaagtgccaacaatgt 39699606 Score = 48.1 bits (24), Expect = 0.14 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1064 tgaatctaacactcaacccaaatgaagtggttgcaattgt 1103 ||||||||||||| | ||||||||||| ||||||||||| Sbjct: 39698380 tgaatctaacacttcatccaaatgaagtagttgcaattgt 39698341 Score = 48.1 bits (24), Expect = 0.14 Identities = 60/72 (83%) Strand = Plus / Minus Query: 586 gttgctcaagaagcgataagtttggttagaacagtgcgagtgtatgggacggaaaagcaa 645 ||||||||||| | ||||||||||||| | ||||| || || ||||| || |||||||| Sbjct: 39699479 gttgctcaagaggtgataagtttggttcggacagtacgggtttatggaacagaaaagcag 39699420 Query: 646 gagatcaaaagg 657 ||| | |||||| Sbjct: 39699419 gagtttaaaagg 39699408
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 343 bits (173), Expect = 2e-90 Identities = 257/285 (90%) Strand = Plus / Minus Query: 1249 caggagcctaagctattccgaatggatgttagttctaatattaagtatggctgcccaaga 1308 ||||| |||| |||||||||||||||| ||||||||||||||| |||||| || |||||| Sbjct: 48762 caggaacctaggctattccgaatggatattagttctaatattaggtatggttgtccaaga 48703 Query: 1309 gaagttagccaggaagaagttgagtgggctgcaaaacaggcttatgctcacgatttcata 1368 ||||||||| | |||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 48702 gaagttagcaatgaagaagtggagtgggctgcaaagcaggcatatgctcacgatttcata 48643 Query: 1369 ttggctcttccagatggttataacacaattgtcgacgatgctcttcttagtggaggccaa 1428 || |||| || |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 48642 atgtctctccctgatggttataacaccattgtcgatgatgctcttcttagtggaggccaa 48583 Query: 1429 aagcaacgtgttgctattgcaagggcccttctgagggacccggcgatcttagtactcgac 1488 |||||||| ||||||||||| ||||||||||| |||||||| | ||||| ||| | || Sbjct: 48582 aagcaacgcgttgctattgcgagggcccttcttagggacccatccatcttggtattagat 48523 Query: 1489 gaagccactagtgcgcttgatgctgagagtgaacattatgtgaag 1533 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 48522 gaagccactagtgcacttgatgctgagagtgaacattatgtgaag 48478 Score = 222 bits (112), Expect = 4e-54 Identities = 166/184 (90%) Strand = Plus / Minus Query: 758 aggtccttgcagttttgattggaggaatagcaatcatgaatgggaagttcactgctgagc 817 ||||| ||||||| ||||||||||| ||| | |||||| ||||||| | |||||||||| Sbjct: 49966 aggtcattgcagtgttgattggagggatatccatcatggctgggaagctaactgctgagc 49907 Query: 818 aactgacaaaattcacactgtatgccgagtggctgattttgtcaacctggtggattggag 877 ||||||||||||||| ||| ||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 49906 aactgacaaaattcatactctatgctgagtggctaattttgtcaacatggtggattggag 49847 Query: 878 acaattggtcctccctgatgcagtctgttggagcaagtgaaaaagtcttccggttgatgg 937 |||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 49846 acaactggtcctctctgatgcagtctgttggagcaagtgaaaaggtcttccgtttgatgg 49787 Query: 938 atct 941 |||| Sbjct: 49786 atct 49783 Score = 170 bits (86), Expect = 1e-38 Identities = 116/126 (92%) Strand = Plus / Minus Query: 302 aggatattgcttttttcgatgaagaaactgtcggtgatttgacaagtaggcttggttctg 361 |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 51050 aggacattgctttttttgatgaagaaactgttggtgatttgacaagtaggcttggttctg 50991 Query: 362 actgccagcaagtgtctagagttattggcaatgatcttaatttgatttcgcgcaatttgc 421 |||||||||||||||| |||| |||||||||||||||||| | || || |||||||||| Sbjct: 50990 actgccagcaagtgtcacgagtcattggcaatgatcttaatcttatctcacgcaatttgc 50931 Query: 422 ttcagg 427 |||||| Sbjct: 50930 ttcagg 50925 Score = 147 bits (74), Expect = 2e-31 Identities = 92/98 (93%) Strand = Plus / Minus Query: 664 aagtggctggataagctgtatgatgtgagctttcgacaaacaatggcttatggaggctgg 723 |||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 50206 aagtggctagataagctatatgatgtaagctttcggcaaacaatggcttatggaggctgg 50147 Query: 724 agcttgagcttgaactatctgtaccattctactcaggt 761 |||||||| ||||||||||| ||||||||||||||||| Sbjct: 50146 agcttgagtttgaactatctataccattctactcaggt 50109 Score = 133 bits (67), Expect = 3e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 90 gctctcggagatcgctatcccccatctgctcgcggcctccatcttctccgcgcagaatgg 149 |||| |||||||||| || |||||||| ||||| || ||||||||||| |||||||| || Sbjct: 52060 gctcgcggagatcgcgataccccatctcctcgcagcgtccatcttctcggcgcagaacgg 52001 Query: 150 aggcgccgtcttctaccggaacgccaagctcctggttgttctctgtttgatttccggagt 209 ||| || || |||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 52000 aggggctgtgttctaccggaacgctaagcttctggttgttctgtgtttgatttccggagt 51941 Query: 210 gtt 212 ||| Sbjct: 51940 gtt 51938 Score = 119 bits (60), Expect = 5e-23 Identities = 99/112 (88%) Strand = Plus / Minus Query: 422 ttcagggtataggagcactgatttatcttctaatcttatcatggcctcttggactgtgca 481 |||||||| |||| ||||| |||||||| ||| ||||||| ||||| |||||| |||||| Sbjct: 50846 ttcagggtgtaggcgcactaatttatctgctagtcttatcttggccacttggaatgtgca 50787 Query: 482 ctatgcttacttgtgggacattgtcgacaattatgctagttcatggacggta 533 ||||| | | ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 50786 ctatgttgatttgtgcgacattgtcgaccattatgctagttcatggacggta 50735 Score = 109 bits (55), Expect = 4e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 1102 gttggtcttagtggaagtgggaagagtactatagttaacctactgcttcagctatatgaa 1161 |||||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||| Sbjct: 49094 gttggtcttagtggaagtggaaagagtactgtagttaacctactacttcggctatatgaa 49035 Query: 1162 cctacaaatgggcaa 1176 |||||| |||||||| Sbjct: 49034 cctacagatgggcaa 49020 Score = 103 bits (52), Expect = 3e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 1177 atattaatagatggtgtcccactcagcgagcttgacactagatggttcagggaaagaatt 1236 |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 48911 atattagtagatggtgtcccactcagtgagcttgacatcagatggttcagggaaaggatt 48852 Query: 1237 ggttttgtgggacagg 1252 |||||||| ||||||| Sbjct: 48851 ggttttgttggacagg 48836 Score = 75.8 bits (38), Expect = 6e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1603 tctacgattcaagcggctgatagaattattgtgatggaaaatggta 1648 ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 48235 tctacaattcaagcggctgatagaattatcgtgatggaaaatggta 48190 Score = 75.8 bits (38), Expect = 6e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1550 ttagcactgatcctaaggctcgaagaaccgtgattatcatagctcacagg 1599 |||| ||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 48362 ttagtactgatcctaaggctagaagaaccgtgatcatcatagctcacagg 48313 Score = 73.8 bits (37), Expect = 2e-09 Identities = 64/73 (87%) Strand = Plus / Minus Query: 969 aggcctcaggttacagaagctggaaggacggattcaatatgcaaatgtagaattttcata 1028 ||||| ||||||||||||| ||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 49627 aggccacaggttacagaagttggaaggccggattcagtatgccgatgtatcattttcata 49568 Query: 1029 tccttcaagacct 1041 ||| ||||||||| Sbjct: 49567 tccatcaagacct 49555 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 213 cagtggcgtgcgaagctgctgttttggtattgccaacatgatattggttaaac 265 |||||| ||||||||||||||||||||| |||| |||||||||||||| |||| Sbjct: 51371 cagtggtgtgcgaagctgctgttttggtgttgcaaacatgatattggtaaaac 51319 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 262 aaacgaatgagagaaatgctatttgattccatcctttctcagg 304 |||||||||||||||||||| |||||||| || |||||||||| Sbjct: 51216 aaacgaatgagagaaatgctgtttgattctattctttctcagg 51174 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Minus Query: 550 aaattcgcacaagagttcactgcaagtgccaataatgt 587 ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 50542 aaatttgcacaggagttcactgcaagtgccaacaatgt 50505 Score = 48.1 bits (24), Expect = 0.14 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1064 tgaatctaacactcaacccaaatgaagtggttgcaattgt 1103 ||||||||||||| | ||||||||||| ||||||||||| Sbjct: 49279 tgaatctaacacttcatccaaatgaagtagttgcaattgt 49240 Score = 48.1 bits (24), Expect = 0.14 Identities = 60/72 (83%) Strand = Plus / Minus Query: 586 gttgctcaagaagcgataagtttggttagaacagtgcgagtgtatgggacggaaaagcaa 645 ||||||||||| | ||||||||||||| | ||||| || || ||||| || |||||||| Sbjct: 50378 gttgctcaagaggtgataagtttggttcggacagtacgggtttatggaacagaaaagcag 50319 Query: 646 gagatcaaaagg 657 ||| | |||||| Sbjct: 50318 gagtttaaaagg 50307
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 77.8 bits (39), Expect = 2e-10 Identities = 72/83 (86%) Strand = Plus / Minus Query: 325 gaaactgtcggtgatttgacaagtaggcttggttctgactgccagcaagtgtctagagtt 384 ||||| || ||||||||||||||||| ||||| | || || |||||||| || |||||| Sbjct: 1727 gaaacagtaggtgatttgacaagtagacttggggcagattgtcagcaagtttcaagagtt 1668 Query: 385 attggcaatgatcttaatttgat 407 ||||| ||||||||||||||||| Sbjct: 1667 attggaaatgatcttaatttgat 1645 Score = 46.1 bits (23), Expect = 0.54 Identities = 50/59 (84%) Strand = Plus / Minus Query: 895 atgcagtctgttggagcaagtgaaaaagtcttccggttgatggatctcttacctagcaa 953 ||||| || |||||||| |||||||| || ||| ||||||||||||| ||||||||| Sbjct: 478 atgcaatcagttggagctagtgaaaaggtgttcaacttgatggatctctcacctagcaa 420
>gb|AC119414.51| Medicago truncatula clone mth2-23d7, complete sequence Length = 159149 Score = 67.9 bits (34), Expect = 1e-07 Identities = 163/206 (79%) Strand = Plus / Minus Query: 1328 ttgagtgggctgcaaaacaggcttatgctcacgatttcatattggctcttccagatggtt 1387 |||||||||||||||| ||||| |||||||| || || || | || ||||| ||||| Sbjct: 157525 ttgagtgggctgcaaagcaggcctatgctcatgactttatctcagcacttcctagtggtt 157466 Query: 1388 ataacacaattgtcgacgatgctcttcttagtggaggccaaaagcaacgtgttgctattg 1447 || | ||| |||| || || | |||| | ||||| || ||||||||||| ||||||| | Sbjct: 157465 atgagacacttgttgatgacgatcttttaagtggcggacaaaagcaacgaattgctatcg 157406 Query: 1448 caagggcccttctgagggacccggcgatcttagtactcgacgaagccactagtgcgcttg 1507 | |||||| |||| ||||||||| || || | || || |||||||||||||| | | Sbjct: 157405 ctagggccattcttagggacccgaaaatattgattcttgatgaagccactagtgcattgg 157346 Query: 1508 atgctgagagtgaacattatgtgaag 1533 ||||||| ||||||||| |||||||| Sbjct: 157345 atgctgaaagtgaacataatgtgaag 157320 Score = 44.1 bits (22), Expect = 2.1 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1595 acaggctgtctacgattcaagcggctgatagaattattgtgatgga 1640 ||||||| ||||| || ||||| ||||| || |||||||||||||| Sbjct: 156890 acaggctttctaccatacaagccgctgacaggattattgtgatgga 156845
>ref|NM_078215.2| Caenorhabditis elegans Multidrug Resistance Protein family member (mrp-3) (mrp-3) mRNA, complete cds Length = 4248 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1620 tgatagaattattgtgatggaaaatggtagcatcgtggaggacggaa 1666 |||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 4077 tgatcgaattattgtgatggatgctggtagaatcgtggaggacggaa 4123
>emb|Z68113.2|CEE03G2 Caenorhabditis elegans Cosmid E03G2, complete sequence Length = 32112 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 1620 tgatagaattattgtgatggaaaatggtagcatcgtggaggacggaa 1666 |||| |||||||||||||||| |||||| |||||||||||||||| Sbjct: 4810 tgatcgaattattgtgatggatgctggtagaatcgtggaggacggaa 4764
>ref|NM_077726.2| Caenorhabditis elegans P-GlycoProtein related family member (pgp-13) (pgp-13) mRNA, complete cds Length = 3975 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1419 tggaggccaaaagcaacgtgttgctattgc 1448 |||||| ||||||||||||||||||||||| Sbjct: 1671 tggaggacaaaagcaacgtgttgctattgc 1700
>emb|Z67882.1| Caenorhabditis elegans Cosmid F22E10, complete sequence Length = 37527 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1419 tggaggccaaaagcaacgtgttgctattgc 1448 |||||| ||||||||||||||||||||||| Sbjct: 14184 tggaggacaaaagcaacgtgttgctattgc 14213 Score = 50.1 bits (25), Expect = 0.035 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1420 ggaggccaaaagcaacgtgttgctattgc 1448 ||||| ||||||||||||||||||||||| Sbjct: 20371 ggaggacaaaagcaacgtgttgctattgc 20343
>ref|NM_077727.3| Caenorhabditis elegans P-GlycoProtein related family member (pgp-14) (pgp-14) mRNA, complete cds Length = 4283 Score = 50.1 bits (25), Expect = 0.035 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1420 ggaggccaaaagcaacgtgttgctattgc 1448 ||||| ||||||||||||||||||||||| Sbjct: 1733 ggaggacaaaagcaacgtgttgctattgc 1761
>gb|AY519858.1| Caenorhabditis elegans P-glycoprotein related (146.8 kD) (pgp-14) mRNA Length = 4301 Score = 50.1 bits (25), Expect = 0.035 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1420 ggaggccaaaagcaacgtgttgctattgc 1448 ||||| ||||||||||||||||||||||| Sbjct: 1728 ggaggacaaaagcaacgtgttgctattgc 1756
>gb|CP000411.1| Oenococcus oeni PSU-1, complete genome Length = 1780517 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1423 ggccaaaagcaacgtgttgctattgcaagggccctt 1458 |||||||| ||||||||||| |||||||| |||||| Sbjct: 463342 ggccaaaaacaacgtgttgcgattgcaagagccctt 463377
>gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, complete sequence Length = 41406 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 ttttaaaaagagaaagaaacgcag 42 |||||||||||||||||||||||| Sbjct: 24705 ttttaaaaagagaaagaaacgcag 24728
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1420 ggaggccaaaagcaacgtgttgctattg 1447 ||||||||||| |||||||||||||||| Sbjct: 161406 ggaggccaaaaacaacgtgttgctattg 161433
>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence Length = 208713 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 ttttaaaaagagaaagaaacgcag 42 |||||||||||||||||||||||| Sbjct: 55623 ttttaaaaagagaaagaaacgcag 55600
>gb|AF489480.1| Vespula germanica NADH dehydrogenase 3 gene, partial cds; tRNA-Ala, tRNA-Arg, tRNA-Asn, tRNA-Glu, tRNA-Ser, and tRNA-Phe genes, complete sequence; and NADH dehydrogenase 5 gene, partial cds; mitochondrial genes for mitochondrial products Length = 1352 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 taaaaaagggatttttaaaaaga 29 ||||||||||||||||||||||| Sbjct: 858 taaaaaagggatttttaaaaaga 836
>gb|AC105942.2| Homo sapiens chromosome 1 clone RP4-639F20, complete sequence Length = 116491 Score = 46.1 bits (23), Expect = 0.54 Identities = 23/23 (100%) Strand = Plus / Plus Query: 9 aaaaagggatttttaaaaagaga 31 ||||||||||||||||||||||| Sbjct: 70866 aaaaagggatttttaaaaagaga 70888
>ref|XM_525279.2| PREDICTED: Pan troglodytes NK2 transcription factor related, locus 2 (NKX2-2), mRNA Length = 2108 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaac 38 |||||||||||||||||||||| Sbjct: 203 atttttaaaaagagaaagaaac 182
>gb|CP000447.1| Shewanella frigidimarina NCIMB 400, complete genome Length = 4845257 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1427 aaaagcaacgtgttgctattgc 1448 |||||||||||||||||||||| Sbjct: 735142 aaaagcaacgtgttgctattgc 735163
>dbj|AK228750.1| Arabidopsis thaliana mRNA for transporter associated with antigen processing-like protein, complete cds, clone: RAFL16-07-O04 Length = 2357 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 893 tgatgcagtctgttggagcaagtgaaaaagtcttccggttgatggatctc 942 ||||||| || ||||||||||||||||| || |||| ||||||||||| Sbjct: 1381 tgatgcaatcggttggagcaagtgaaaaggttttccaaatgatggatctc 1430
>ref|NM_105729.3| Arabidopsis thaliana ATTAP1; ATPase, coupled to transmembrane movement of substances (ATTAP1) mRNA, complete cds Length = 2347 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 893 tgatgcagtctgttggagcaagtgaaaaagtcttccggttgatggatctc 942 ||||||| || ||||||||||||||||| || |||| ||||||||||| Sbjct: 1381 tgatgcaatcggttggagcaagtgaaaaggttttccaaatgatggatctc 1430
>gb|AY693141.1| Saccharomyces cerevisiae clone FLH158344.01X YPL270W gene, complete cds Length = 2463 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgcaagggc 1454 |||||||| |||||||| ||| |||| ||||||||||| Sbjct: 1900 agtggaggacaaaagcagcgtattgcgattgcaagggc 1937
>ref|NM_002509.2| Homo sapiens NK2 transcription factor related, locus 2 (Drosophila) (NKX2-2), mRNA Length = 2092 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaac 38 |||||||||||||||||||||| Sbjct: 203 atttttaaaaagagaaagaaac 182
>ref|XM_539461.2| PREDICTED: Canis familiaris similar to ATP-binding cassette, sub-family B (MDR/TAP), member 1 (LOC482344), mRNA Length = 3810 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1111 agtggaagtgggaagagtactatagt 1136 ||||| |||||||||||||||||||| Sbjct: 1267 agtggcagtgggaagagtactatagt 1292
>gb|AC090150.9| Homo sapiens chromosome 8, clone RP11-521M14, complete sequence Length = 210629 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 gatttttaaaaagagaaagaaa 37 |||||||||||||||||||||| Sbjct: 80260 gatttttaaaaagagaaagaaa 80281
>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence Length = 174730 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gatttttaaaaagagaaagaaa 37 |||||||||||||||||||||| Sbjct: 121232 gatttttaaaaagagaaagaaa 121211
>gb|AC099842.2| Homo sapiens chromosome 11, clone RP11-747E23, complete sequence Length = 159274 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1872 gcctcaaagttccgggttcaaatgatccac 1901 |||||||| ||| ||||||||||||||||| Sbjct: 16845 gcctcaaacttctgggttcaaatgatccac 16816
>gb|AY078409.1| Arabidopsis thaliana transporter associated with antigen processing-like protein (TAP1) mRNA, complete cds Length = 2103 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 893 tgatgcagtctgttggagcaagtgaaaaagtcttccggttgatggatctc 942 ||||||| || ||||||||||||||||| || |||| ||||||||||| Sbjct: 1256 tgatgcaatcggttggagcaagtgaaaaggttttccaaatgatggatctc 1305
>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence Length = 171700 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1872 gcctcaaagttccgggttcaaatgatccac 1901 |||||||| ||| ||||||||||||||||| Sbjct: 156223 gcctcaaacttctgggttcaaatgatccac 156194
>gb|AC078999.4| Homo sapiens chromosome 18, clone RP11-104G8, complete sequence Length = 156593 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2133 attttgatagaaacttgtatattcaa 2158 ||||||||||||||| |||||||||| Sbjct: 107458 attttgatagaaactggtatattcaa 107433
>emb|AL080248.7|HSBA19D2 Human DNA sequence from clone RP11-19D2 on chromosome 20 Contains the a novel gene and the 5' end of a novel gene, complete sequence Length = 166913 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 7 taaaaaagggatttttaaaaagagaa 32 ||||||||||||||||||||| |||| Sbjct: 62210 taaaaaagggatttttaaaaatagaa 62235
>gb|AF314519.2|AF314519 Mannheimia glucosida strain PH240 lktCABD operon, partial sequence Length = 6952 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1618 gctgatagaattattgtgatggaaaa 1643 |||||| ||||||||||||||||||| Sbjct: 5409 gctgatcgaattattgtgatggaaaa 5434
>emb|AL583850.5| Human DNA sequence from clone RP11-430G6 on chromosome 1 Contains the RGS4 gene for regulator of G-protein signalling 4 and the 3' end of the RGS5 gene for regulator of G-protein signalling 5, complete sequence Length = 165329 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaacgcag 42 ||||||||||||||||||||| |||| Sbjct: 12270 atttttaaaaagagaaagaaaggcag 12295
>emb|AL133325.20| Human DNA sequence from clone RP5-984P4 on chromosome 20 Contains the NKX2-2 gene for NK2 transcription factor related locus 2 (Drosophila), a hydroxysteroid (17-beta) dehydrogenase 12 (HSD17B12) pseudogene, the GSTM3P gene for glutathione S-transferase M3 pseudogene, a novel gene and two CpG islands, complete sequence Length = 160013 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaac 38 |||||||||||||||||||||| Sbjct: 109383 atttttaaaaagagaaagaaac 109404
>gb|AC034204.6| Homo sapiens chromosome 5 clone CTB-192J21, complete sequence Length = 61027 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gatttttaaaaagagaaagaaa 37 |||||||||||||||||||||| Sbjct: 48382 gatttttaaaaagagaaagaaa 48361
>emb|Z73626.1|SCYPL270W S.cerevisiae chromosome XVI reading frame ORF YPL270w Length = 2745 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgcaagggc 1454 |||||||| |||||||| ||| |||| ||||||||||| Sbjct: 1973 agtggaggacaaaagcagcgtattgcgattgcaagggc 2010
>gb|AC034243.7| Homo sapiens chromosome 5 clone RP1-204O11, complete sequence Length = 191308 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gatttttaaaaagagaaagaaa 37 |||||||||||||||||||||| Sbjct: 60276 gatttttaaaaagagaaagaaa 60255
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1426 caaaagcaacgtgttgctattgcaag 1451 |||||||||||||| ||||||||||| Sbjct: 1054061 caaaagcaacgtgtagctattgcaag 1054086
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1419 tggaggccaaaagcaacgtgttgctattgc 1448 |||||| |||||||||||||| |||||||| Sbjct: 73178 tggaggacaaaagcaacgtgtggctattgc 73149
>gb|AC011143.6|AC011143 Homo sapiens chromosome 18, clone RP11-1O15, complete sequence Length = 136492 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2133 attttgatagaaacttgtatattcaa 2158 ||||||||||||||| |||||||||| Sbjct: 5562 attttgatagaaactggtatattcaa 5587
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 893 tgatgcagtctgttggagcaagtgaaaaagtcttccggttgatggatctc 942 ||||||| || ||||||||||||||||| || |||| ||||||||||| Sbjct: 74303 tgatgcaatcggttggagcaagtgaaaaggttttccaaatgatggatctc 74352
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Minus Query: 893 tgatgcagtctgttggagcaagtgaaaaagtcttccggttgatggatctc 942 ||||||| || ||||||||||||||||| || |||| ||||||||||| Sbjct: 80199 tgatgcaatcggttggagcaagtgaaaaggttttccaaatgatggatctc 80150
>gb|AC009299.5| Homo sapiens BAC clone RP11-26B22 from 2, complete sequence Length = 169697 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2169 tctatgtgatgttaaaaatagg 2190 |||||||||||||||||||||| Sbjct: 41051 tctatgtgatgttaaaaatagg 41030
>gb|AY108485.1| Zea mays PCO084581 mRNA sequence Length = 1123 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1486 gacgaagccactagtgcgcttgatgctgag 1515 |||||||| ||||||||||| ||||||||| Sbjct: 581 gacgaagcgactagtgcgctggatgctgag 610
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2130 tgaattttgatagaaacttgta 2151 |||||||||||||||||||||| Sbjct: 47920 tgaattttgatagaaacttgta 47941
>emb|CT009700.8| Mouse DNA sequence from clone RP23-114M15 on chromosome 13, complete sequence Length = 184143 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gatttttaaaaagagaaagaaa 37 |||||||||||||||||||||| Sbjct: 24939 gatttttaaaaagagaaagaaa 24918
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2130 tgaattttgatagaaacttgta 2151 |||||||||||||||||||||| Sbjct: 35596 tgaattttgatagaaacttgta 35617
>gb|AY425280.2| Mannheimia ruminalis strain HPA113 ATP-dependent hslVU protease (hslU) gene, partial cds; putative membrane protein (lapB), leukotoxin acyl transferase (lktC), leukotoxin structural protein (lktA), leukotoxin translocon ABC transporter (lktB), and leukotoxin translocon membrane fusion protein (lktD) genes, complete cds; and putative ABC-type nitrate/sulfonate/bicarbonate transport system (tauB) gene, partial cds Length = 9126 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1618 gctgatagaattattgtgatggaaaa 1643 |||||| ||||||||||||||||||| Sbjct: 7347 gctgatcgaattattgtgatggaaaa 7372
>gb|L16959.1|YSCBCSB Saccharomyces cerevisiae germline (MDL2) gene, complete cds Length = 2861 Score = 44.1 bits (22), Expect = 2.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgcaagggc 1454 |||||||| |||||||| ||| |||| ||||||||||| Sbjct: 2021 agtggaggacaaaagcagcgtattgcgattgcaagggc 2058
>gb|AC192735.2| Pan troglodytes BAC clone CH251-340G8 from chromosome 7, complete sequence Length = 180427 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 139294 atttttaaaaagagaaagaaa 139274
>emb|CT990554.14| N.leucogenys DNA sequence from clone CH271-270L3, complete sequence Length = 175654 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2168 atctatgtgatgttaaaaata 2188 ||||||||||||||||||||| Sbjct: 53409 atctatgtgatgttaaaaata 53389
>gb|AC188560.3| Pan troglodytes BAC clone CH251-501H8 from chromosome 7, complete sequence Length = 167110 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 113484 atttttaaaaagagaaagaaa 113504
>emb|AM263198.1| Listeria welshimeri serovar 6b str. SLCC5334 complete genome Length = 2814130 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1419 tggaggccaaaagcaacgtgttgctattgcaag 1451 |||||| ||||| ||||| |||||||||||||| Sbjct: 874792 tggaggacaaaaacaacgagttgctattgcaag 874824
>emb|CT829949.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z69, full insert sequence Length = 593 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gccggcgagcgggcggtggac 67 ||||||||||||||||||||| Sbjct: 158 gccggcgagcgggcggtggac 178
>ref|NM_001062015.1| Oryza sativa (japonica cultivar-group) Os05g0400400 (Os05g0400400) mRNA, complete cds Length = 560 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gccggcgagcgggcggtggac 67 ||||||||||||||||||||| Sbjct: 170 gccggcgagcgggcggtggac 190
>gb|AC182362.4| Spermophilus tridecemlineatus clone VMRC20-580B15, complete sequence Length = 128519 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 652 aaaaggtacacgaagtggctg 672 ||||||||||||||||||||| Sbjct: 78879 aaaaggtacacgaagtggctg 78859
>gb|U97553.2| Murine herpesvirus 68 strain WUMS, complete genome Length = 119451 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 853 attttgtcaacctggtggatt 873 ||||||||||||||||||||| Sbjct: 56785 attttgtcaacctggtggatt 56765
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 gatattgcttttttcgatgaa 324 ||||||||||||||||||||| Sbjct: 18859183 gatattgcttttttcgatgaa 18859203
>emb|AL111168.1| Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome Length = 1641481 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1420 ggaggccaaaagcaacgtgttgctattgc 1448 ||||| ||||| ||||||||||||||||| Sbjct: 724244 ggagggcaaaaacaacgtgttgctattgc 724216
>gb|DQ822515.1| Oryzias latipes Dlx2a (dlx2a) mRNA, complete cds Length = 1648 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1953 tcaaaagactcagtatctggc 1973 ||||||||||||||||||||| Sbjct: 592 tcaaaagactcagtatctggc 612
>ref|XM_625119.2| PREDICTED: Apis mellifera similar to ATP-binding cassette sub-family B member 10, mitochondrial precursor (ATP-binding cassette transporter 10) (ABC transporter 10 protein) (Mitochondrial ATP-binding cassette 2) (M-ABC2) (LOC552744), mRNA Length = 1943 Score = 42.1 bits (21), Expect = 8.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1489 gaagccactagtgcgcttgatgctgagagtgaacattatgt 1529 |||||||| ||||| | ||||| ||||||||||||||||| Sbjct: 1594 gaagccacaagtgcattagatgcagagagtgaacattatgt 1634
>emb|AM232418.1| Catharanthus roseus cDNA-AFLP fragment, clone CRG426 Length = 63 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1335 ggctgcaaaacaggcttatgctcacgatttcat 1367 ||||||||||||||| ||||| || |||||||| Sbjct: 10 ggctgcaaaacaggcctatgcgcatgatttcat 42
>ref|NM_130268.2| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances (AT2G47000) mRNA, complete cds Length = 4001 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1483 ctcgacgaagccactagtgcgcttgatgctgag 1515 |||||||||||||| ||||| ||||| |||||| Sbjct: 3613 ctcgacgaagccacgagtgctcttgacgctgag 3645
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1420 ggaggccaaaagcaacgtgttgctattgc 1448 ||||| ||||| ||||||||||||||||| Sbjct: 802700 ggagggcaaaaacaacgtgttgctattgc 802672
>ref|XM_585048.2| PREDICTED: Bos taurus similar to Huntingtin interacting protein 1 related (Hip1-related) (Hip 12) (LOC508291), partial mRNA Length = 4357 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1665 aaagcacagcgagcttgtcaa 1685 ||||||||||||||||||||| Sbjct: 1518 aaagcacagcgagcttgtcaa 1538
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 gatattgcttttttcgatgaa 324 ||||||||||||||||||||| Sbjct: 73277 gatattgcttttttcgatgaa 73297
>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds Length = 660392 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 217432 atttttaaaaagagaaagaaa 217412
>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence Length = 178573 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 aaaaagggatttttaaaaagagaaagaaa 37 ||||||| ||||||||||| ||||||||| Sbjct: 26460 aaaaaggtatttttaaaaaaagaaagaaa 26488
>gb|AC124470.4| Mus musculus BAC clone RP24-174O2 from chromosome 6, complete sequence Length = 187005 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 100060 atttttaaaaagagaaagaaa 100080
>gb|AC127268.2| Mus musculus BAC clone RP23-426K20 from chromosome 3, complete sequence Length = 182377 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tttttaaaaagagaaagaaac 38 ||||||||||||||||||||| Sbjct: 132583 tttttaaaaagagaaagaaac 132603
>gb|AC123933.4| Mus musculus BAC clone RP23-339F7 from chromosome 2, complete sequence Length = 201267 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1690 aatggattgtattcaagatta 1710 ||||||||||||||||||||| Sbjct: 109165 aatggattgtattcaagatta 109145
>gb|AC004694.1| Homo sapiens BAC clone CTB-152H24 from 7, complete sequence Length = 63749 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 56238 atttttaaaaagagaaagaaa 56258
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1414 cttagtggaggccaaaagcaa 1434 ||||||||||||||||||||| Sbjct: 2193793 cttagtggaggccaaaagcaa 2193813
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1153600 agtggcggacaaaagcaacgtgttgcaattgca 1153632
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1118500 agtggcggacaaaagcaacgtgttgcaattgca 1118532
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1014837 agtggcggacaaaagcaacgtgttgcaattgca 1014869
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1094962 agtggcggacaaaagcaacgtgttgcaattgca 1094994
>gb|AC087359.13| Homo sapiens chromosome 8, clone RP11-446H10, complete sequence Length = 182167 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 124129 atttttaaaaagagaaagaaa 124149
>gb|AC008474.9| Homo sapiens chromosome 19 clone CTC-379B2, complete sequence Length = 186115 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 atgttgctcaagaagcgataagttt 608 |||||||||||||||| |||||||| Sbjct: 13874 atgttgctcaagaagcaataagttt 13850
>ref|NM_077501.2| Caenorhabditis elegans F42E11.1 (p-glycoprotein) mRNA, complete cds Length = 3880 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1423 ggccaaaagcaacgtgttgctattgcaag 1451 |||||||| |||||| ||||||||||||| Sbjct: 3505 ggccaaaaacaacgtattgctattgcaag 3533
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1481 tactcgacgaagccactagtgcgcttgat 1509 |||||||||||||||| || ||||||||| Sbjct: 1776327 tactcgacgaagccaccagcgcgcttgat 1776355
>dbj|AK032012.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330544J03 product:CD163 antigen, full insert sequence Length = 2780 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 1120 atttttaaaaagagaaagaaa 1100
>emb|Z66562.1|CEF42E11 Caenorhabditis elegans Cosmid F42E11, complete sequence Length = 30382 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1423 ggccaaaagcaacgtgttgctattgcaag 1451 |||||||| |||||| ||||||||||||| Sbjct: 9831 ggccaaaaacaacgtattgctattgcaag 9859
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete sequence Length = 106329 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1483 ctcgacgaagccactagtgcgcttgatgctgag 1515 |||||||||||||| ||||| ||||| |||||| Sbjct: 49323 ctcgacgaagccacgagtgctcttgacgctgag 49355
>gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, complete sequence Length = 171415 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tttttaaaaagagaaagaaac 38 ||||||||||||||||||||| Sbjct: 6039 tttttaaaaagagaaagaaac 6019
>emb|AL390123.14| Human DNA sequence from clone RP11-566F5 on chromosome 10, complete sequence Length = 158093 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tttttaaaaagagaaagaaac 38 ||||||||||||||||||||| Sbjct: 106959 tttttaaaaagagaaagaaac 106979
>emb|AL031114.2|HS468H17 Human DNA sequence from clone RP3-468H17 on chromosome Xq21.3-22.1, complete sequence Length = 115743 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 43841 atttttaaaaagagaaagaaa 43861
>gb|AC092813.2| Homo sapiens chromosome 1 clone RP11-550H2, complete sequence Length = 182529 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 89383 atttttaaaaagagaaagaaa 89363
>emb|BX664748.8| Zebrafish DNA sequence from clone DKEY-3N7 in linkage group 4, complete sequence Length = 206047 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 tttatcttctaatcttatcat 463 ||||||||||||||||||||| Sbjct: 34604 tttatcttctaatcttatcat 34584
>emb|BX901968.13| Zebrafish DNA sequence from clone DKEYP-59C12 in linkage group 18, complete sequence Length = 126945 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1175 aaatattaatagatggtgtcc 1195 ||||||||||||||||||||| Sbjct: 19184 aaatattaatagatggtgtcc 19204
>emb|X70280.1|DDP13PA Dictyostelium discoideum partial mRNA for p13 protein Length = 932 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 accggaacgccaagctcctgg 184 ||||||||||||||||||||| Sbjct: 527 accggaacgccaagctcctgg 507
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 |||||||||||| | ||||||||||| |||||| Sbjct: 1269504 agtggaggccaacaacaacgtgttgcgattgca 1269472
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 accggaacgccaagctcctgg 184 ||||||||||||||||||||| Sbjct: 297711 accggaacgccaagctcctgg 297691
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1419 tggaggccaaaagcaacgtgttgctattgcaag 1451 |||||||||||| ||| | |||||||||||||| Sbjct: 290706 tggaggccaaaaacaaagagttgctattgcaag 290674
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1107485 agtggcggacaaaagcaacgtgttgcaattgca 1107517
>emb|CR933018.9| Zebrafish DNA sequence from clone CH211-224H1 in linkage group 4, complete sequence Length = 181431 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tttttaaaaagagaaagaaac 38 ||||||||||||||||||||| Sbjct: 90378 tttttaaaaagagaaagaaac 90398
>emb|AL662810.16| Mouse DNA sequence from clone RP23-42P24 on chromosome 11 Contains a novel gene (9630006B20Rik), a novel gene, a ribosomal protein S12 (Rps12) pseudogene, a novel gene (LOC268391), the Bcl11a gene for B-cell CLL/lymphoma 11A (zinc finger protein), two novel genes and three CpG islands, complete sequence Length = 267641 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 41189 atttttaaaaagagaaagaaa 41209
>emb|BX897671.5| Zebrafish DNA sequence from clone CH211-214K5 in linkage group 4, complete sequence Length = 201108 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tttttaaaaagagaaagaaac 38 ||||||||||||||||||||| Sbjct: 120777 tttttaaaaagagaaagaaac 120757
>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone BACR08P09, complete sequence Length = 181463 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 gatattgcttttttcgatgaa 324 ||||||||||||||||||||| Sbjct: 9947 gatattgcttttttcgatgaa 9967
>gb|AC171014.3| Gallus gallus BAC clone CH261-89A18 from chromosome ul, complete sequence Length = 181265 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tctgctcgcggcctccatctt 134 ||||||||||||||||||||| Sbjct: 61020 tctgctcgcggcctccatctt 61040
>gb|AC022882.5|AC022882 Homo sapiens chromosome 11, clone RP11-444K7, complete sequence Length = 174469 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 2016 atttttaaaaagagaaagaaa 1996
>gb|AC123538.3| Sminthopsis macroura clone 79G10, complete sequence Length = 84553 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 taaaaaagggatttttaaaaa 27 ||||||||||||||||||||| Sbjct: 80298 taaaaaagggatttttaaaaa 80318
>gb|AC147285.3| Pan troglodytes BAC clone RP43-81J3 from chromosome 7, complete sequence Length = 150761 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 aaaaagggatttttaaaaagagaaagaaa 37 ||||||| ||||||||||| ||||||||| Sbjct: 132364 aaaaaggtatttttaaaaaaagaaagaaa 132392
>gb|AC092130.3| Homo sapiens chromosome 16 clone RP11-148M9, complete sequence Length = 170514 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 gttcactgcaagtgccaataa 584 ||||||||||||||||||||| Sbjct: 56867 gttcactgcaagtgccaataa 56847
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1078699 agtggcggacaaaagcaacgtgttgcaattgca 1078731
>gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, complete sequence Length = 132644 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1881 ttccgggttcaaatgatccac 1901 ||||||||||||||||||||| Sbjct: 128191 ttccgggttcaaatgatccac 128171
>gb|AC007968.3| Homo sapiens BAC clone RP11-430P16 from 2, complete sequence Length = 144319 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1982 tatatggaggttaaagaaatt 2002 ||||||||||||||||||||| Sbjct: 110595 tatatggaggttaaagaaatt 110615
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1651 atcgtggaggacggaaagcac 1671 ||||||||||||||||||||| Sbjct: 716905 atcgtggaggacggaaagcac 716885
>gb|AC125435.8| Homo sapiens chromosome 15, clone CTD-2235H24, complete sequence Length = 124255 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 91213 atttttaaaaagagaaagaaa 91193
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1077272 agtggcggacaaaagcaacgtgttgcaattgca 1077304
>gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D18, complete sequence Length = 149103 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 aaaaagggatttttaaaaagagaaagaaa 37 ||||||| ||||||||||| ||||||||| Sbjct: 116967 aaaaaggtatttttaaaaaaagaaagaaa 116939
>gb|AC007242.3| Homo sapiens BAC clone RP11-182H9 from 2, complete sequence Length = 112748 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1027 tatccttcaagaccttcagcgccta 1051 |||||||||||| |||||||||||| Sbjct: 53381 tatccttcaagagcttcagcgccta 53357
>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence Length = 206482 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 11067 atttttaaaaagagaaagaaa 11047
>emb|CR353352.1| Gallus gallus finished cDNA, clone ChEST277k1 Length = 772 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tctgctcgcggcctccatctt 134 ||||||||||||||||||||| Sbjct: 34 tctgctcgcggcctccatctt 14
>emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in linkage group 4, complete sequence Length = 223608 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 tttatcttctaatcttatcat 463 ||||||||||||||||||||| Sbjct: 120834 tttatcttctaatcttatcat 120814
>dbj|AK062745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F07, full insert sequence Length = 560 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gccggcgagcgggcggtggac 67 ||||||||||||||||||||| Sbjct: 170 gccggcgagcgggcggtggac 190
>gb|AC102858.11| Mus musculus chromosome 5, clone RP24-507F5, complete sequence Length = 176211 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 100847 atttttaaaaagagaaagaaa 100827
>gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome Length = 119550 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 853 attttgtcaacctggtggatt 873 ||||||||||||||||||||| Sbjct: 56785 attttgtcaacctggtggatt 56765
>dbj|AP003034.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-347E24, complete sequence Length = 158780 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 95481 atttttaaaaagagaaagaaa 95461
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 138 cgcgcagaatggaggcgccgtcttc 162 ||||||||||| ||||||||||||| Sbjct: 3534618 cgcgcagaatgaaggcgccgtcttc 3534594
>ref|XM_722443.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06813) partial mRNA Length = 6699 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 aaaaagggatttttaaaaaga 29 ||||||||||||||||||||| Sbjct: 4672 aaaaagggatttttaaaaaga 4692
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 ctgtcggtgatttgacaagtaggct 353 ||||||||||||| ||||||||||| Sbjct: 185668 ctgtcggtgattttacaagtaggct 185692
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1420 ggaggccaaaagcaacgtgttgctattgc 1448 ||||| |||||||||||||||| |||||| Sbjct: 4731854 ggaggacaaaagcaacgtgttggtattgc 4731826
>gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, region 59C1-59C5, P1 clones DS06621 and DS02186, complete sequence Length = 101320 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gatattgcttttttcgatgaa 324 ||||||||||||||||||||| Sbjct: 68654 gatattgcttttttcgatgaa 68634
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 42.1 bits (21), Expect = 8.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1417 agtggaggccaaaagcaacgtgttgctat 1445 ||||| ||||| ||||||||||||||||| Sbjct: 749729 agtggtggccagaagcaacgtgttgctat 749701
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1119343 agtggcggacaaaagcaacgtgttgcaattgca 1119375
>emb|AL928991.9| Mouse DNA sequence from clone RP23-455F5 on chromosome 2, complete sequence Length = 149871 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1690 aatggattgtattcaagatta 1710 ||||||||||||||||||||| Sbjct: 62173 aatggattgtattcaagatta 62193
>gb|AC005621.1|AC005621 Homo sapiens chromosome 19, cosmid F19678, complete sequence Length = 40583 Score = 42.1 bits (21), Expect = 8.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 atgttgctcaagaagcgataagttt 608 |||||||||||||||| |||||||| Sbjct: 35116 atgttgctcaagaagcaataagttt 35092
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 8.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1417 agtggaggccaaaagcaacgtgttgctattgca 1449 ||||| || ||||||||||||||||| |||||| Sbjct: 1046139 agtggcggacaaaagcaacgtgttgcaattgca 1046171
>gb|AY285189.1| Sus scrofa clone UMNp1029.gcg microsatellite sequence Length = 541 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 486 atttttaaaaagagaaagaaa 466
>emb|AL133370.4|CNS01DUV Human chromosome 14 DNA sequence BAC C-2566J3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155822 Score = 42.1 bits (21), Expect = 8.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 atttttaaaaagagaaagaaa 37 ||||||||||||||||||||| Sbjct: 93819 atttttaaaaagagaaagaaa 93839 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 396,379,224 Number of extensions: 21401695 Number of successful extensions: 130477 Number of sequences better than 10.0: 133 Number of HSP's gapped: 130473 Number of HSP's successfully gapped: 171 Length of query: 2209 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2186 Effective length of database: 18,503,978,556 Effective search space: 40449697123416 Effective search space used: 40449697123416 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
