ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf21c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os03g47240:12003.t04085:unspliced-genomic expressed protein 43 5e-05
2LOC_Os06g51150:12006.t04798:unspliced-genomic catalase isozy... 33 1.5
3LOC_Os06g38670:12006.t03566:unspliced-genomic receptor-like ... 32 2.1
4LOC_Os05g51130:12005.t04542:unspliced-genomic mitochondrial ... 32 2.1
5LOC_Os02g22260:12002.t02014:unspliced-genomic fruit protein ... 32 2.1
6LOC_Os06g06960:12006.t00581:unspliced-genomic S-locus-like r... 32 2.1
7LOC_Os02g43670:12002.t03951:unspliced-genomic transferase fa... 32 2.9
8LOC_Os12g05640:12012.t00452:unspliced-genomic rf1 protein, m... 31 3.9
9LOC_Os10g12354:12010.t01017:unspliced-genomic NUMOD3 motif f... 31 3.9
10LOC_Os01g58640:12001.t05259:unspliced-genomic nucleotide pyr... 31 5.4
11LOC_Os07g48630:12007.t04493:unspliced-genomic ETHYLENE-INSEN... 31 5.4
12LOC_Os03g32190:12003.t02811:unspliced-genomic transposon pro... 30 7.4
13LOC_Os03g32180:12003.t02812:unspliced-genomic polygalacturon... 30 7.4
14LOC_Os11g11320:12011.t01020:unspliced-genomic retrotransposo... 30 7.4
15LOC_Os04g01610:12004.t00059:unspliced-genomic expressed protein 30 7.4

>LOC_Os03g47240:12003.t04085:unspliced-genomic expressed protein|
          Length = 3440
 Score = 43.2 bits (88), Expect(3) = 5e-05
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1 / +3

                                  
Query: 85   SDFWECDIWAAAPEVLGREATA 150
            SD WEC IWA + EVLGREA A
Sbjct: 3009 SDLWECYIWATSSEVLGREAAA 3074



 Score = 22.6 bits (43), Expect(3) = 5e-05
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2 / +2

                                 
Query: 356  VLEGIICTMHIMDSNPNHHFG 418
            V+E  I T     + PNHHFG
Sbjct: 3287 VVERNIATSTDERNIPNHHFG 3349



 Score = 21.7 bits (41), Expect(3) = 5e-05
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1 / +2

                    
Query: 37   QDAALLPP 60
            QDAALLPP
Sbjct: 1301 QDAALLPP 1324



 Score = 42.3 bits (86), Expect = 0.002
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2 / +1

                           
Query: 89   ISGNVIFGPPLQKYW 133
            ISGNVIFGPPLQKYW
Sbjct: 3013 ISGNVIFGPPLQKYW 3057



 Score = 34.5 bits (69), Expect = 0.43
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2 / -2

                                  
Query: 149  AVASLPSTSGAAAQISHSQKSL 84
            A ASLPSTS   AQI HSQ+SL
Sbjct: 3073 AAASLPSTSEEVAQI*HSQRSL 3008



 Score = 34.5 bits (69), Expect = 0.43
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -1 / -1

                           
Query: 132  QYFWSGGPNITFPEI 88
            QYF  GGPNITFPEI
Sbjct: 3056 QYF*RGGPNITFPEI 3012



 Score = 33.1 bits (66), Expect = 1.1
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +3 / +2

                                        
Query: 93   LGM*YLGRRSRSTGQRSNSKIRRQKKAK 176
            LGM YLG   RSTGQRS+S   ++++ +
Sbjct: 3017 LGMLYLGHLFRSTGQRSSSSSSKREQKR 3100



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>LOC_Os06g51150:12006.t04798:unspliced-genomic catalase isozyme B, putative, expressed|
          Length = 4170

 Score = 32.7 bits (65), Expect = 1.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1 / -2

                                             
Query: 333  SKANKDLRLPKNPSTFSHHCISFRIMCPRLIEG 235
            +KANK  ++ K   T+S HCIS   + P+  +G
Sbjct: 3920 TKANKRWQMYKQVQTYSTHCISLYYLFPKTQQG 3822



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>LOC_Os06g38670:12006.t03566:unspliced-genomic receptor-like protein kinase precursor, putative|
          Length = 7790

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -2 / -3

                                 
Query: 398  SNPLCAWYK*YLPVRNLGQLI 336
            S+PLCA YK Y+  RNLG LI
Sbjct: 5625 SHPLCAAYKGYIYRRNLGVLI 5563



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>LOC_Os05g51130:12005.t04542:unspliced-genomic mitochondrial chaperone BCS1, putative, expressed|
          Length = 2023

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2 / -3

                                 
Query: 437 YFFFFFGQNGGLDSNPLCAWYK 372
           +FFFFFG  GG +   +  WY+
Sbjct: 125 FFFFFFGMGGGGEGELVLKWYE 60



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>LOC_Os02g22260:12002.t02014:unspliced-genomic fruit protein PKIWI502, putative, expressed|
          Length = 11685

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2 / +1

                                       
Query: 170 LLLPPDLAVASLPSTSGAAAQISHSQKS 87
           +L PPDL+   +PS  G + Q SH  +S
Sbjct: 13  ILSPPDLSAPQIPSRPGCSQQESHRHRS 96



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>LOC_Os06g06960:12006.t00581:unspliced-genomic S-locus-like receptor protein kinase, putative, expressed|
          Length = 2678

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1 / +2

                                                       
Query: 94   WECDIWAAAPEVLGREATARSGGKRRPNWVDLTETSSCFAESM 222
            W  + W   PE+     T  S   RR N+ +L + + CF E +
Sbjct: 1469 WAANKWGRRPEIQDEGYTIISSQFRRFNYKELEKATDCFQEML 1597



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>LOC_Os02g43670:12002.t03951:unspliced-genomic transferase family protein, expressed|
          Length = 4830

 Score = 31.8 bits (63), Expect = 2.9
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1 / -3

                                                             
Query: 118  APEVLGREATARSGGKRRPNWVDLTETSSCFAESMSPYTSLDQSRTHNS 264
            +P   GR A ARS  +RR   +  T +++  ++  + Y   DQS  H S
Sbjct: 2815 SPASAGRPAPARSSRRRRTRRLPGTVSAAHTSKQTNMYAHQDQSSAHTS 2669



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>LOC_Os12g05640:12012.t00452:unspliced-genomic rf1 protein, mitochondrial precursor, putative, expressed|
          Length = 2718

 Score = 31.3 bits (62), Expect = 3.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1 / -2

                                   
Query: 127 VLGREATARSGGKRRPNWVDLTET 198
           V+G+E    + G+RRP W+  TET
Sbjct: 440 VVGKERRRETRGRRRPRWMARTET 369



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>LOC_Os10g12354:12010.t01017:unspliced-genomic NUMOD3 motif family protein, expressed|
          Length = 9821

 Score = 31.3 bits (62), Expect = 3.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1 / -1

                                                             
Query: 112  AAAPEVLGREATARSGGKRRPNWVDLTETSSCFAESMSPYTSLDQSRTH 258
            AA    LG       G KR+ N++      SC+    +P   LDQS +H
Sbjct: 6452 AATHTPLGIAPNLHGGKKRKINFIHAPGKESCYT*PYAP*KILDQSSSH 6306



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>LOC_Os01g58640:12001.t05259:unspliced-genomic nucleotide pyrophosphatase/phosphodiesterase, putative, expressed|
          Length = 7303

 Score = 30.9 bits (61), Expect = 5.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3 / +2

                               
Query: 412  MVVWIRIHYVHGTNDTFQY 356
            +V+W R+H+ H  N TF+Y
Sbjct: 4658 LVIWGRLHWTHQWNTTFRY 4714



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>LOC_Os07g48630:12007.t04493:unspliced-genomic ETHYLENE-INSENSITIVE3-like 1 protein, putative, expressed|
          Length = 2813

 Score = 30.9 bits (61), Expect = 5.4
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1 / -2

                                                     
Query: 118  APEVLGREATARSGGKRRPNWVDLTETSSCFAESMSPYTSL 240
            +PE L  +  A SGG R P W     +SSC   +     SL
Sbjct: 1762 SPETLALKDAAESGGGRAPGWSLR*RSSSCLRTASQVTISL 1640



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>LOC_Os03g32190:12003.t02811:unspliced-genomic transposon protein, putative, unclassified, expressed|
          Length = 2315

 Score = 30.4 bits (60), Expect = 7.4
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2 / -2

                                    
Query: 185 STQFGLLLPPDLAVASLPSTSGAAA 111
           +T F LLL  +L   +LPST GAAA
Sbjct: 235 ATVFNLLLEGNLLTGTLPSTFGAAA 161



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>LOC_Os03g32180:12003.t02812:unspliced-genomic polygalacturonase inhibitor 1 precursor, putative|
          Length = 1420

 Score = 30.4 bits (60), Expect = 7.4
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2 / +1

                                    
Query: 185 STQFGLLLPPDLAVASLPSTSGAAA 111
           +T F LLL  +L   +LPST GAAA
Sbjct: 436 ATVFNLLLEGNLLTGTLPSTFGAAA 510



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>LOC_Os11g11320:12011.t01020:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 2486

 Score = 30.4 bits (60), Expect = 7.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1 / -3

                                  
Query: 115  AAPEVLGREATARSGGKRRPNW 180
            AA     R ATAR GG+RR  W
Sbjct: 2283 AASRTTARAATARRGGRRRRRW 2218



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>LOC_Os04g01610:12004.t00059:unspliced-genomic expressed protein|
          Length = 1998

 Score = 30.4 bits (60), Expect = 7.4
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1 / -3

                                        
Query: 94  WECDIWAAAPEVLGREATARSGGKRRPNW 180
           W C  W          A   +GG+RRP W
Sbjct: 589 WTCTAWPGRARCP*APAVTGAGGRRRPTW 503


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 145,353,333
Number of extensions: 1866883
Number of successful extensions: 7017
Number of sequences better than 10.0: 15
Length of query: 146
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 99
Effective length of database: 52,968,820
Effective search space: 5243913180
Effective search space used: 5243913180
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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