ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf18a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9Y4F3:LKAP_HUMAN Limkain-b1 - Homo sapiens (Human) 36 0.28
2Q8WZ42:TITIN_HUMAN Titin - Homo sapiens (Human) 35 0.63
3P41245:MMP9_MOUSE Matrix metalloproteinase-9 precursor - Mus mus... 35 0.63
4P36027:MID2_YEAST Cell wall integrity sensor MID2 precursor - Sa... 34 1.1
5Q9P6Y2:SEN2_NEUCR Probable tRNA-splicing endonuclease subunit se... 34 1.4
6P70670:NACAM_MOUSE Nascent polypeptide-associated complex subuni... 34 1.4
7Q6G3E9:GATA_BARHE Glutamyl-tRNA(Gln) amidotransferase subunit A ... 34 1.4
8Q9ET66:PI16_MOUSE Peptidase inhibitor 16 precursor - Mus musculu... 33 1.8
9Q3YSB0:GATA_EHRCJ Glutamyl-tRNA(Gln) amidotransferase subunit A ... 33 1.8
10O97159:CHDM_DROME Chromodomain helicase-DNA-binding protein Mi-2... 33 1.8
11Q8NRC3:ODO1_CORGL 2-oxoglutarate dehydrogenase E1 component - Co... 33 2.4
12Q8FW67:GATA_BRUSU Glutamyl-tRNA(Gln) amidotransferase subunit A ... 33 2.4
13Q8YC57:GATA_BRUME Glutamyl-tRNA(Gln) amidotransferase subunit A ... 33 2.4
14Q7V5M4:IF2_PROMM Translation initiation factor IF-2 - Prochloroc... 33 3.1
15P54545:DPO41_BACSU DNA polymerase IV 1 - Bacillus subtilis 32 4.0
16Q85601:REX_HTLV2 Protein Rex - Human T-cell leukemia virus 2 (HT... 32 4.1
17P46821:MAP1B_HUMAN Microtubule-associated protein 1B - Homo sapi... 32 4.1
18Q4J860:ILVD_SULAC Dihydroxy-acid dehydratase - Sulfolobus acidoc... 32 4.1
19Q1KKT0:HXDAA_FUGRU Homeobox protein Hox-D10a - Fugu rubripes (Ja... 32 4.1
20Q92QK7:GATA_RHIME Glutamyl-tRNA(Gln) amidotransferase subunit A ... 32 4.1
21Q8BX90:FND3A_MOUSE Fibronectin type-III domain-containing protei... 32 4.1
22P13627:CY1_PARDE Cytochrome c1 precursor - Paracoccus denitrificans 32 4.1
23P36157:YK57_YEAST Uncharacterized protein YKR077W - Saccharomyce... 32 5.3
24Q05740:TONB_YEREN Protein tonB - Yersinia enterocolitica 32 5.3
25P75591:NUSA_MYCPN Transcription elongation protein nusA - Mycopl... 32 5.3
26P73930:FTSY_SYNY3 Cell division protein ftsY homolog - Synechocy... 32 5.3
27Q756V1:FKBP3_ASHGO FK506-binding protein 3 - Ashbya gossypii (Ye... 32 5.3
28P53214:MTL1_YEAST Protein MTL1 precursor - Saccharomyces cerevis... 32 6.9
29Q58294:RFCL_METJA Replication factor C large subunit - Methanoco... 32 6.9
30Q9PJV8:ISPF_CHLMU 2-C-methyl-D-erythritol 2,4-cyclodiphosphate s... 32 6.9
31P49187:MK10_RAT Mitogen-activated protein kinase 10 - Rattus nor... 31 9.1
32P53779:MK10_HUMAN Mitogen-activated protein kinase 10 - Homo sap... 31 9.1
33P14873:MAP1B_MOUSE Microtubule-associated protein 1B - Mus muscu... 31 9.1
34Q86QH9:H1L1_OSTED Sperm-specific H1/protamine-like protein type ... 31 9.1
35A2AJK6:CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 - ... 31 9.1
36Q9P2D1:CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 - ... 31 9.1

>Q9Y4F3:LKAP_HUMAN Limkain-b1 - Homo sapiens (Human)|
          Length = 1741
 Score = 36.2 bits (82), Expect = 0.28
 Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
 Frame = +1

Query: 169  GALTKNLLLKDKKHRLYIVSALADTKVDMKILSQRLGLGKGGVRMAPEENLRQVLQVPLG 348
            GA+ + + +K   H+  +V      K DMK     L L        P E  R +L+VP  
Sbjct: 1537 GAIPQVVWIKGHGHKRIVV-----LKNDMKSRLSSLSLSPANHENQPSEGER-ILEVPE- 1589

Query: 349  CVTPFALFNESASAVSLLLDQGLKSKQSCYFHPLTNDVTIALSSSNLDKFLLSIGKQPAY 528
                    + +AS + L  D    S        LT+D  + L  + +   L S   +P  
Sbjct: 1590 --------SHTASELKLGADGSGPSHTEQELLRLTDDSPVDLLCAPVPSCLPSPQLRPDP 1641

Query: 529  VDLEASPVVG-KDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCL-PEVKA 702
            V L+++ ++  ++ P + ++++    + + EE +E P P  +  + +    +C+   V  
Sbjct: 1642 VILQSADLIQFEERPQEPSEIM----ILNQEEKMEIPIPGKSKTLTSDSSSSCISAAVPV 1697

Query: 703  KPKVSNKEAESSESKVPANNGA 768
             P  S++ +ES  SK P  + A
Sbjct: 1698 PPCPSSETSESLLSKDPVESPA 1719



to top

>Q8WZ42:TITIN_HUMAN Titin - Homo sapiens (Human)|
          Length = 34350

 Score = 35.0 bits (79), Expect = 0.63
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 538   EASPVVGKDNPPDLADLVPTGALSSSE-ESVENPTPKAAPKINAPKEKTCLPEVKAKPKV 714
             EA P   +  PP++ +     AL     E VE P P A P++  P +K  +PE KA P V
Sbjct: 11579 EAIPPKPESPPPEVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVPPKKP-VPEKKA-PAV 11636

Query: 715   SNKEAESSESKVP 753
               K+ E    KVP
Sbjct: 11637 VAKKPELPPVKVP 11649



to top

>P41245:MMP9_MOUSE Matrix metalloproteinase-9 precursor - Mus musculus (Mouse)|
          Length = 730

 Score = 35.0 bits (79), Expect = 0.63
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = +1

Query: 592 PTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKPKVSNKEAESSESKVPANNGAN 771
           PTGA S    S  +P P  AP           P   A P   + EA S+ES  PA+N  N
Sbjct: 487 PTGAPSPGPTSSPSPGPTGAPS----------PGPTAAPTAGSSEA-STESLSPADNPCN 535

Query: 772 VEIF 783
           V++F
Sbjct: 536 VDVF 539



to top

>P36027:MID2_YEAST Cell wall integrity sensor MID2 precursor - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 376

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 36/130 (27%), Positives = 58/130 (44%)
 Frame = -2

Query: 917 SRSGAARPLKSSNFKILVSSSSLIFNFFDASDRNNGKMTSSTSVANISTFAPLLAGTLLS 738
           S S A    +SS  ++  SSS L  +   +S  ++  +TSSTS           + +L+S
Sbjct: 34  SNSSAVSTARSSVSRVSSSSSILSSSMVSSSSADSSSLTSSTS-----------SRSLVS 82

Query: 737 ELSASLFETLGLAFTSGRHVFSXXXXXXXXXXXXGFSTDSSEELSAPVGTRSARSGGLSL 558
             S+S      ++FTS    FS             FS+DSS   S+   + S+ S   S+
Sbjct: 83  HTSSST-SIASISFTS----FS-------------FSSDSSTSSSSSASSDSSSSSSFSI 124

Query: 557 PTTGEASKST 528
            +T   S+S+
Sbjct: 125 SSTSATSESS 134



to top

>Q9P6Y2:SEN2_NEUCR Probable tRNA-splicing endonuclease subunit sen-2 - Neurospora|
           crassa
          Length = 633

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 10/182 (5%)
 Frame = +1

Query: 310 EENLRQVLQVPLGCVTPFALFNESASAVSLLL------DQGLKSKQSCYFHPLTNDVTIA 471
           EEN+R+ L+ P+G +   AL N     V+L +      D G+   +S      T D   A
Sbjct: 282 EENVRKELKAPVGPIELLALPNSLVDLVALSVVSVLSEDAGVDEDESS-----TEDQLEA 336

Query: 472 LSSSNLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVEN----PT 639
            + +N          +P     EA+      +PP       T  L  S+ + EN    P 
Sbjct: 337 SALTN---------DEPETSATEANDSTSSSSPPH------TDGLPDSQPTQENVPATPE 381

Query: 640 PKAAPKINAPKEKTCLPEVKAKPKVSNKEAESSESKVPANNGANVEIFATDVLDVIFPLF 819
            + + + ++  E T      A  +V N            N  ++VE+F++ V  V  P+ 
Sbjct: 382 RRKSVRFSSTVESTTFQHTDAASEVKNN-----------NGSSDVEVFSSFVSAVEKPVI 430

Query: 820 LS 825
           L+
Sbjct: 431 LN 432



to top

>P70670:NACAM_MOUSE Nascent polypeptide-associated complex subunit alpha, muscle-specific|
            form - Mus musculus (Mouse)
          Length = 2187

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 607  SSSEESVENPTPKAAPKINAPKEKTCLPEVKAKPKVSNKEAESSESK 747
            ++ EE+   P+P+  PK+  PKE +  P  K  PK +  +  S+ S+
Sbjct: 1293 AAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSE 1339



to top

>Q6G3E9:GATA_BARHE Glutamyl-tRNA(Gln) amidotransferase subunit A - Bartonella henselae|
           (Rochalimaea henselae)
          Length = 494

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 32/119 (26%), Positives = 46/119 (38%)
 Frame = +1

Query: 271 RLGLGKGGVRMAPEENLRQVLQVPLGCVTPFALFNESASAVSLLLDQGLKSKQSCYFHPL 450
           RL  G GG+             +PLG    FA  +    A S +LD      +S     L
Sbjct: 62  RLAKGHGGILEG----------IPLGIKDLFATQDVHTQACSYILDGFKPHYESTVTANL 111

Query: 451 TNDVTIALSSSNLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESV 627
             D  + L   N+D+F +    + +Y     SP   KD+      LVP G+   S  +V
Sbjct: 112 WRDGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRKKDSN---EKLVPGGSSGGSAAAV 167



to top

>Q9ET66:PI16_MOUSE Peptidase inhibitor 16 precursor - Mus musculus (Mouse)|
          Length = 489

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 25/86 (29%), Positives = 36/86 (41%)
 Frame = +1

Query: 520 PAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVK 699
           P  +D EAS        P  + L P  +L+ S ESV     +A PK    + +  LPE +
Sbjct: 308 PKSMDEEASKSSATSVSPKKS-LYPKMSLTESGESVPQIQEEAEPKDELSEPEAILPEAE 366

Query: 700 AKPKVSNKEAESSESKVPANNGANVE 777
           A P  +  E    E++ P       E
Sbjct: 367 AAPTEAEVELREPEAESPKAESPEAE 392



to top

>Q3YSB0:GATA_EHRCJ Glutamyl-tRNA(Gln) amidotransferase subunit A - Ehrlichia canis|
           (strain Jake)
          Length = 487

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 25/106 (23%), Positives = 44/106 (41%)
 Frame = +1

Query: 310 EENLRQVLQVPLGCVTPFALFNESASAVSLLLDQGLKSKQSCYFHPLTNDVTIALSSSNL 489
           +ENL  +  +P+G    F   N   +A S +L   +    S     L N+  + L   N+
Sbjct: 65  QENLTPLTGIPVGIKDLFCTKNVRTTACSNILKNFIPQYDSTVTKLLLNNGAVMLGKLNM 124

Query: 490 DKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESV 627
           D+F +      +      +P +  D     A++VP G+   S  +V
Sbjct: 125 DEFAMGSSNSNSCFGNVKNPWIRADG----AEVVPGGSSGGSSAAV 166



to top

>O97159:CHDM_DROME Chromodomain helicase-DNA-binding protein Mi-2 homolog - Drosophila|
            melanogaster (Fruit fly)
          Length = 1982

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +1

Query: 553  VGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKPKVSNKEAE 732
            V ++NP + A     G    S+  V+    K  PK     E+T  PEVK +PK   KE E
Sbjct: 1607 VKQENPVEEA----AGDTKPSDAEVKTEVAKTEPK-----EETKDPEVKEEPKTEEKEKE 1657

Query: 733  SSESKVP 753
              + K P
Sbjct: 1658 KVDDKKP 1664



to top

>Q8NRC3:ODO1_CORGL 2-oxoglutarate dehydrogenase E1 component - Corynebacterium|
           glutamicum (Brevibacterium flavum)
          Length = 1257

 Score = 33.1 bits (74), Expect = 2.4
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 403 LDQGLKSKQSCYFHPLTNDVTIALSSSNLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLA 582
           L++  +SK+      +++  T   ++  +D+      K P  VD E   +      P+  
Sbjct: 22  LNKPSRSKEKRRVPAVSSASTFGQNAWLVDEMFQQFQKDPKSVDKEWRELFEAQGGPNTT 81

Query: 583 DLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKP--KVSNKEAESSESKVP 753
                   S+ +ES + P PKAAP   A       P V+ KP  K + K  ESS  + P
Sbjct: 82  PATTEAQPSAPKESAK-PAPKAAPAAKAA------PRVETKPADKTAPKAKESSVPQQP 133



to top

>Q8FW67:GATA_BRUSU Glutamyl-tRNA(Gln) amidotransferase subunit A - Brucella suis|
          Length = 493

 Score = 33.1 bits (74), Expect = 2.4
 Identities = 27/97 (27%), Positives = 40/97 (41%)
 Frame = +1

Query: 337 VPLGCVTPFALFNESASAVSLLLDQGLKSKQSCYFHPLTNDVTIALSSSNLDKFLLSIGK 516
           +PLG    FA       A S +LD      +S     L  D  + L   N+D+F +    
Sbjct: 74  IPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSN 133

Query: 517 QPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESV 627
           + +Y     +P   K +    ADLVP G+   S  +V
Sbjct: 134 ETSYYGPVKNPWRAKGSN---ADLVPGGSSGGSAAAV 167



to top

>Q8YC57:GATA_BRUME Glutamyl-tRNA(Gln) amidotransferase subunit A - Brucella melitensis|
          Length = 493

 Score = 33.1 bits (74), Expect = 2.4
 Identities = 27/97 (27%), Positives = 40/97 (41%)
 Frame = +1

Query: 337 VPLGCVTPFALFNESASAVSLLLDQGLKSKQSCYFHPLTNDVTIALSSSNLDKFLLSIGK 516
           +PLG    FA       A S +LD      +S     L  D  + L   N+D+F +    
Sbjct: 74  IPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSN 133

Query: 517 QPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESV 627
           + +Y     +P   K +    ADLVP G+   S  +V
Sbjct: 134 ETSYYGPVKNPWRAKGSN---ADLVPGGSSGGSAAAV 167



to top

>Q7V5M4:IF2_PROMM Translation initiation factor IF-2 - Prochlorococcus marinus|
           (strain MIT 9313)
          Length = 1125

 Score = 32.7 bits (73), Expect = 3.1
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
 Frame = +1

Query: 475 SSSNLDKFLLSIGKQPAYVDLEASPVVGKDN---------PPDLADLVPTGALSSSEESV 627
           S S  +K +LS+ K       + +P + K           P   A+ +PT     S ESV
Sbjct: 65  SKSEPEKTILSVKKAAPTAIKDVAPPIRKATSSSEISHVKPSAPANPIPTSPARPSTESV 124

Query: 628 ENPTPKAAPKINAPKEKTCLPEVKAKP--KVSNKEAESSESKVPANNGAN 771
            +P P   P    P   +  P+  A+P     ++ A  S    P    AN
Sbjct: 125 AHPAPPTRPANPTPTPTSSPPKTAARPINAPISRPAIPSRPTAPTPRSAN 174



to top

>P54545:DPO41_BACSU DNA polymerase IV 1 - Bacillus subtilis|
          Length = 414

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +2

Query: 683 VYQK*KLSPKFRTRRQKVQRVKFLLIMVQMLRYLQLMCLTSSSHCSCPRHQRN*ILKRKS 862
           V++K   S   R +R++V   K  +    M+RY     +T S+    P  Q+N ILK   
Sbjct: 268 VFRKLAASVSDRLQRKEVMASKLFI----MIRYADWRTITRSTTLRNPIDQKNDILKEAE 323

Query: 863 LLKF*NWKTLEDELLQI 913
            L F +WK     LL I
Sbjct: 324 HLFFKHWKKNPVRLLGI 340



to top

>Q85601:REX_HTLV2 Protein Rex - Human T-cell leukemia virus 2 (HTLV-2)|
          Length = 170

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 22/83 (26%), Positives = 33/83 (39%)
 Frame = +1

Query: 520 PAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVK 699
           PAY+D+ + P V   N P    +    AL S+  S+ +P P    +   P     LP + 
Sbjct: 58  PAYIDMPSWPPVQSTNSPGTPSMDALSALLSNTLSLASP-PSPPREPQGPSRSLPLPPLL 116

Query: 700 AKPKVSNKEAESSESKVPANNGA 768
           + P+         ES  P    A
Sbjct: 117 SPPRFHLPSFNQCESTPPTEMDA 139



to top

>P46821:MAP1B_HUMAN Microtubule-associated protein 1B - Homo sapiens (Human)|
          Length = 2468

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = +1

Query: 514  KQPAYVDLEASPVVGKD--NPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCL 687
            K+P      +SPV   D  + P  A   P G   SS++     +PK    +    + T  
Sbjct: 2246 KKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKESVEKAAKPTTT 2305

Query: 688  PEVKAKPKVSNKEAESSESKVPANNGAN 771
            PEVKA    +  E +  E+K  AN  A+
Sbjct: 2306 PEVKA----ARGEEKDKETKNAANASAS 2329



to top

>Q4J860:ILVD_SULAC Dihydroxy-acid dehydratase - Sulfolobus acidocaldarius|
          Length = 561

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
 Frame = +1

Query: 127 LTVEEQAKHVGNF-GGALTKNLLLKDKKHRLYIVSALAD--TKVDMKILSQRLGLGKGGV 297
           LT+E+  + +G F  G + ++ L + +K     V   +   T   M  +S+ LG+   G 
Sbjct: 160 LTIEDVHEAIGAFIAGKIDEHELYEIEKRAHPTVGTCSGMFTANTMGSMSEALGMALPGS 219

Query: 298 RMAPEENLRQVLQVPLGCVTPFALFNESASAVSLLLDQGLKSKQSCYFHPLTNDVTIALS 477
                 + R+++ V            E+  AVS LL+ G+KS+    F    N + + ++
Sbjct: 220 ASPTATSSRRIMYV-----------RETGKAVSRLLENGVKSRDILTFEAFENAIAVLMA 268

Query: 478 ---SSNLDKFLLSI 510
              S+N    LL+I
Sbjct: 269 MGGSTNAVLHLLAI 282



to top

>Q1KKT0:HXDAA_FUGRU Homeobox protein Hox-D10a - Fugu rubripes (Japanese pufferfish)|
           (Takifugu rubripes)
          Length = 336

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 592 PTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKA-KPKVSNKEAESSESKVPANN 762
           P  A S +   VE+P         A  EK C PE  A  P++  KE + S+S  PANN
Sbjct: 205 PEPATSRTPIQVESPKS-------ATVEKICSPEASASSPELLQKEGKDSKSDQPANN 255



to top

>Q92QK7:GATA_RHIME Glutamyl-tRNA(Gln) amidotransferase subunit A - Rhizobium meliloti|
           (Sinorhizobium meliloti)
          Length = 493

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 26/97 (26%), Positives = 39/97 (40%)
 Frame = +1

Query: 337 VPLGCVTPFALFNESASAVSLLLDQGLKSKQSCYFHPLTNDVTIALSSSNLDKFLLSIGK 516
           +PLG    F        A S +LD      +S     L ND  + L   N+D+F +    
Sbjct: 74  IPLGIKDLFGTEGIHTQACSHILDGFEPRYESTVTQNLWNDGAVMLGKLNMDEFAMGSSN 133

Query: 517 QPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESV 627
           + +Y     +P   K +     DLVP G+   S  +V
Sbjct: 134 ETSYYGPVKNPWRAKGSN---LDLVPGGSSGGSAAAV 167



to top

>Q8BX90:FND3A_MOUSE Fibronectin type-III domain-containing protein 3a - Mus musculus|
           (Mouse)
          Length = 1134

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
 Frame = +1

Query: 484 NLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKIN 663
           N +  + S GK+  Y     S  +G++    L DL P     +  ++  N       +  
Sbjct: 243 NYEVLVSSTGKEGKY----RSVYIGEETSVTLNDLKPATDYHAKVQAESNSIKGIPSEAE 298

Query: 664 APKEKTCLPEVKAKPKVSN--KEAESSESKVPANNGANVEIF 783
           +    +C P+    P+++N  K + + + K P++NG+ ++ F
Sbjct: 299 SFTTLSCEPDPPNAPRIANRTKNSLTLQWKAPSDNGSKIQSF 340



to top

>P13627:CY1_PARDE Cytochrome c1 precursor - Paracoccus denitrificans|
          Length = 450

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = +1

Query: 532 DLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKPK 711
           D EA P    +      +  P    ++ E + E P  +  P  +AP E+    E  A+P+
Sbjct: 101 DAEAEPAA--EEAQATTEEAPAEEPAAEEPAAEEPAEE--PAADAPAEEAAAEEAPAEPE 156

Query: 712 V-----SNKEAESSESKVPANNGANVEIFATDVLD 801
                 + +E E++E + PA   A  E  A +V++
Sbjct: 157 AAAEEPAAEEPEATEEEAPAEEAAAEEAPAEEVVE 191



to top

>P36157:YK57_YEAST Uncharacterized protein YKR077W - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 363

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 28/104 (26%), Positives = 41/104 (39%)
 Frame = +1

Query: 478 SSNLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPK 657
           SS+  KF LSIG+             GK        L P   L +    +E P PK  P 
Sbjct: 58  SSSFGKFSLSIGQN------------GK-----ATILGPINVLPTDTSKMEKPVPKKKPV 100

Query: 658 INAPKEKTCLPEVKAKPKVSNKEAESSESKVPANNGANVEIFAT 789
            +   EKT +  +  K +  +       SKVP  +  +++  AT
Sbjct: 101 TSDRVEKTRILSLLKKMRNKSSTVNKKYSKVPLKSTTSLQPAAT 144



to top

>Q05740:TONB_YEREN Protein tonB - Yersinia enterocolitica|
          Length = 255

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
 Frame = +1

Query: 502 LSIGKQPAYVDLEASPV-VGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEK 678
           +S+ +     ++E +P+ V   N    A   P  A   +E   E P P+  P   AP E 
Sbjct: 33  VSVEQMRIQPEIEDAPIAVTMVNIDTFAAPQPAAAEPQAEPEPE-PEPEPEPIDEAPPEP 91

Query: 679 TCLPE---------VKAKPKVSNKEAESSESKVP 753
             LPE         VK KPK   KE +  E K P
Sbjct: 92  EVLPEPVPVPIPEPVKPKPKPVKKEVKKPEVKKP 125



to top

>P75591:NUSA_MYCPN Transcription elongation protein nusA - Mycoplasma pneumoniae|
          Length = 540

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +1

Query: 529 VDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKP 708
           ++LEA+P V    P       P            + TPK  PK+N PK     P VK K 
Sbjct: 449 LNLEATPKVAAPTPTPAPQPTPAPTKVEPVPPPVSVTPKPIPKVNKPK-----PVVKPKS 503

Query: 709 KVS-NKEAESSESK 747
             S   EA+ S++K
Sbjct: 504 VFSITVEADDSKTK 517



to top

>P73930:FTSY_SYNY3 Cell division protein ftsY homolog - Synechocystis sp. (strain PCC|
           6803)
          Length = 504

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +1

Query: 538 EASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPE---VKAKP 708
           E++P  G +  P+LA  V      S  E     T  AAP    P   T  P+     AK 
Sbjct: 17  ESAPPEGAEVSPELAPEVIQAETESPSEEDSQTTELAAPPPEEPSSDTANPDDYLQWAKA 76

Query: 709 KVSNKEAESSESKVPANNGANVEIFA 786
              N +A  +E+  P  + A + + A
Sbjct: 77  AYQNIQARKAETVSPPESAAAITVEA 102



to top

>Q756V1:FKBP3_ASHGO FK506-binding protein 3 - Ashbya gossypii (Yeast) (Eremothecium|
           gossypii)
          Length = 418

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
 Frame = +1

Query: 436 YFHP-----LTNDVTIALSSSNLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTG 600
           YF P     +T  VT+ L+ + +D   L   K+PA + L        D    LAD     
Sbjct: 17  YFGPPPAIDVTVPVTVRLTMAAIDPESLDDEKKPATLRLIRRNPAFDDEDDLLAD----- 71

Query: 601 ALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKPKVSNKEAESSESK 747
              S EE  E    ++ P+   PK+K      KA+ +  + E E SE +
Sbjct: 72  ---SEEEEEEESEEESEPETKKPKKKA----AKAESEEEDSEEEDSEGE 113



to top

>P53214:MTL1_YEAST Protein MTL1 precursor - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 551

 Score = 31.6 bits (70), Expect = 6.9
 Identities = 32/133 (24%), Positives = 56/133 (42%)
 Frame = -2

Query: 926 VKLSRSGAARPLKSSNFKILVSSSSLIFNFFDASDRNNGKMTSSTSVANISTFAPLLAGT 747
           V  + S  A    S++  +++S+SS  F F   S  +    + STSV+  S + P  + +
Sbjct: 152 VASTSSTVASSTLSTSSSLVISTSSSTFTFSSESSSSLISSSISTSVSTSSVYVPSSSTS 211

Query: 746 LLSELSASLFETLGLAFTSGRHVFSXXXXXXXXXXXXGFSTDSSEELSAPVGTRSARSGG 567
                S+ L  +   + +S   +FS             FS+ SS   S+   + S+ S  
Sbjct: 212 SPPSSSSELTSSSYSSSSSSSTLFS---------YSSSFSSSSSSSSSSSSSSSSSSSSS 262

Query: 566 LSLPTTGEASKST 528
            S  T   +S S+
Sbjct: 263 SSYFTLSTSSSSS 275



to top

>Q58294:RFCL_METJA Replication factor C large subunit - Methanococcus jannaschii|
          Length = 516

 Score = 31.6 bits (70), Expect = 6.9
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
 Frame = +1

Query: 487 LDKFLLSIGKQP------AYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKA 648
           L+K L  IG++       A  DL+   ++ K+NP   ADLV    +   E  V      A
Sbjct: 346 LNKILKKIGEKTHTSSKRARFDLQMLKLLAKENPSVAADLVDYFEIKEDELKVLVGDKLA 405

Query: 649 APKINAPKEKTCLPEVKAKPKVSNKEAESSESK 747
           +  +   KEK  L   K K K   ++ +  E K
Sbjct: 406 SEILKILKEKKKLERKKKKEKEKLEKEKKKEEK 438



to top

>Q9PJV8:ISPF_CHLMU 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Chlamydia|
           muridarum
          Length = 178

 Score = 31.6 bits (70), Expect = 6.9
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 1/172 (0%)
 Frame = +1

Query: 271 RLGLGKGGVRMAPEENLRQVLQVPLGCVTPFALFNESASAVSLLLDQGLKSKQSCY-FHP 447
           R+G+G+   R  P +N       P  CV    +F E+        D  +     C  F  
Sbjct: 18  RVGIGQDSHRFLPSDN-------PKPCVLGGIIF-ENTPGFEANSDGDVVFHAICNAFSS 69

Query: 448 LTNDVTIALSSSNLDKFLLSIGKQPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESV 627
           +T+ V +   +   D+ L + G   + V L+ +          +A L PT  +S    ++
Sbjct: 70  VTHQVILGALA---DELLKAKGISDSAVYLKEA----------VASLKPTQKISHLAITI 116

Query: 628 ENPTPKAAPKINAPKEKTCLPEVKAKPKVSNKEAESSESKVPANNGANVEIF 783
           E   PK  PKI+A +EK     ++      N  A S E       G  V+ F
Sbjct: 117 EGQRPKLLPKISAMREKIA-EILRISLDSVNITATSGEGLTSMGQGHGVQCF 167



to top

>P49187:MK10_RAT Mitogen-activated protein kinase 10 - Rattus norvegicus (Rat)|
          Length = 464

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = +1

Query: 517 QPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEV 696
           Q  Y+++   P   +  PP + D      L   E ++E        ++   +EKT    V
Sbjct: 355 QHPYINVWYDPAEVEAPPPQIYDK----QLDEREHTIEEWKELIYKEVMNSEEKTKNGVV 410

Query: 697 KAKPKVSNKEAESSESKVPANNGANVEIFATD 792
           K +P  S     SSES  P+++  ++   +TD
Sbjct: 411 KGQPSPSGAAVNSSESLPPSSSVNDISSMSTD 442



to top

>P53779:MK10_HUMAN Mitogen-activated protein kinase 10 - Homo sapiens (Human)|
          Length = 464

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = +1

Query: 517 QPAYVDLEASPVVGKDNPPDLADLVPTGALSSSEESVENPTPKAAPKINAPKEKTCLPEV 696
           Q  Y+++   P   +  PP + D      L   E ++E        ++   +EKT    V
Sbjct: 355 QHPYINVWYDPAEVEAPPPQIYDK----QLDEREHTIEEWKELIYKEVMNSEEKTKNGVV 410

Query: 697 KAKPKVSNKEAESSESKVPANNGANVEIFATD 792
           K +P  S     SSES  P+++  ++   +TD
Sbjct: 411 KGQPSPSGAAVNSSESLPPSSSVNDISSMSTD 442



to top

>P14873:MAP1B_MOUSE Microtubule-associated protein 1B - Mus musculus (Mouse)|
          Length = 2464

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +1

Query: 514  KQPAYVDLEASPVV---GKDNPPDLADLVPTGALSSSEESVEN-PTPKAAPKINAPKEKT 681
            K+P      +SPV    GK  P  LA     GAL  S + V    +PK    +    + T
Sbjct: 2242 KKPGTKTKSSSPVKKGDGKSKP--LAASPKPGALKESSDKVSRVASPKKKESVEKATKTT 2299

Query: 682  CLPEVKAKPKVSNKEAESSESKVPANNGAN 771
              PEVKA    +  E +  E+K  AN  A+
Sbjct: 2300 TTPEVKA----TRGEEKDKETKNAANASAS 2325



to top

>Q86QH9:H1L1_OSTED Sperm-specific H1/protamine-like protein type 1 precursor|
           [Contains: Sperm-specific protein OE1 - Ostrea edulis
           (Native oyster) (European flat oyster)
          Length = 202

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +1

Query: 595 TGALSSSEESVENPTPKAAPKINAPKEKTCLPEVKAKPKVSNKEAESSESKVPANNGANV 774
           +GA  S        +PK A K  +PK+K+     K+K K +N +A+ S  K   +NG   
Sbjct: 110 SGATGSFRVGKAPASPKKAKKAKSPKKKS---SKKSKNKSNNAKAKKSPKKKADSNGIRY 166

Query: 775 EIF 783
           + +
Sbjct: 167 QAY 169



to top

>A2AJK6:CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 - Mus musculus (Mouse)|
          Length = 2986

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +1

Query: 616 EESVENPTPKAAPKINAPKEK---TCLPEVKAKPKVSNK--EAESSESKVPANNG 765
           +E  E  TPKA      PKEK   T  P+ K+  K SNK  ++E+S  K   N G
Sbjct: 653 KEKKEPKTPKAPKIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKG 707



to top

>Q9P2D1:CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 - Homo sapiens (Human)|
          Length = 2997

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +1

Query: 616 EESVENPTPKAAPKINAPKEK---TCLPEVKAKPKVSNK--EAESSESKVPANNG 765
           +E  E  TPKA      PKEK   T  P+ K+  K SNK  ++E+S  K   N G
Sbjct: 663 KEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKG 717


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 203,697,266
Number of extensions: 4363406
Number of successful extensions: 12241
Number of sequences better than 10.0: 36
Number of HSP's gapped: 12200
Number of HSP's successfully gapped: 36
Length of query: 403
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 288
Effective length of database: 69,142,514
Effective search space: 19913044032
Effective search space used: 19913044032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top