ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf21b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073054:Os11g0147100 395 e-110
2Os12g0144000:Os12g0144000 390 e-109
3AK121573: 97 2e-20
4AK066242:Os01g0226500 33 0.40
5AK110367: 30 2.6
6AK107019:Os02g0288100 29 5.8
7AK071003:Os02g0751900 29 5.8
8AK063420:Os03g0800100 29 5.8
9AF221552: 29 7.6
10AK121375:Os01g0672700 29 7.6
11Os06g0245700:Os06g0245700 28 9.9

>AK073054:Os11g0147100 |
          Length = 246
 Score =  395 bits (1016), Expect = e-110
 Identities = 201/244 (82%), Positives = 216/244 (88%)
 Frame = +1

Query: 184 MASADLLRREEEFYESLFDSAKGDAAAAKTRGQMIERKIEALEDMATKVSNRRSRRWLND 363
           MASADLLRREEEFY SLFDSAKG   A K+RGQMIERKIE LEDMA KVSNRRSRRWLND
Sbjct: 1   MASADLLRREEEFYASLFDSAKG-GDAVKSRGQMIERKIEVLEDMAAKVSNRRSRRWLND 59

Query: 364 RLLIELVPRLHVEEIKGLFAPPPFGEEAPLSAFCRTSVGEWDAFRSIDMDVEARFMQRMK 543
           RLLIELVPRLHVEEIKGLFAPPP+GEE P+SAFCRTSVGEWDAFRSIDMDVEAR +Q+MK
Sbjct: 60  RLLIELVPRLHVEEIKGLFAPPPWGEELPVSAFCRTSVGEWDAFRSIDMDVEARLVQQMK 119

Query: 544 QSSAKQKNLMNEDELIVLNAWRRIDCQTREAMKRNFLPELLEIYEERIRAFIEDNIDKDV 723
           QSS KQKN ++ DEL+ LN+W  ID QTREA+KRNFLP+LLEIYEER+R FIED   KD+
Sbjct: 120 QSSTKQKNHLDRDELVALNSWHHIDRQTREAIKRNFLPDLLEIYEERVRTFIEDTSGKDM 179

Query: 724 LVLNVQDPFQRLLLHGVCEFYNVTSTTTGTVQDGKPWKTTTIKKRSGTGVAPRITLVSFL 903
           LVLNVQDPFQRLLLHGVCEFYNV+STTT TV+DGK  KTT IKKRSGTG   RITLVSFL
Sbjct: 180 LVLNVQDPFQRLLLHGVCEFYNVSSTTTTTVRDGKLCKTTAIKKRSGTGAPSRITLVSFL 239

Query: 904 RTKK 915
           R KK
Sbjct: 240 RMKK 243



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>Os12g0144000:Os12g0144000 |
          Length = 260

 Score =  390 bits (1003), Expect = e-109
 Identities = 203/259 (78%), Positives = 218/259 (84%), Gaps = 15/259 (5%)
 Frame = +1

Query: 193 ADLLRREEEFYESLFDSAKGDAAAAKTRGQMIERKIEALEDMATKVSNRRSRRWLNDRLL 372
           ADLLRREEEFY SLFDS KG   A K+RGQMIERKIE LEDMATKVSNRRSRRWLNDRLL
Sbjct: 2   ADLLRREEEFYASLFDSPKG-GDAVKSRGQMIERKIEVLEDMATKVSNRRSRRWLNDRLL 60

Query: 373 IELVPRLHVEEIKGLFAPPPFG---------------EEAPLSAFCRTSVGEWDAFRSID 507
           IELVPRLHVEEIKGLFAPPP+G               EE P+SAFCRTS GEWDAFRSID
Sbjct: 61  IELVPRLHVEEIKGLFAPPPWGLTVWPLNVQICVGSSEELPVSAFCRTSDGEWDAFRSID 120

Query: 508 MDVEARFMQRMKQSSAKQKNLMNEDELIVLNAWRRIDCQTREAMKRNFLPELLEIYEERI 687
           MDVEAR MQ+MKQSS KQKN ++ DELI LNAW RID QTREA+KRNFLP+LL+IYE+RI
Sbjct: 121 MDVEARLMQQMKQSSTKQKNHVDSDELIALNAWHRIDRQTREAIKRNFLPDLLDIYEDRI 180

Query: 688 RAFIEDNIDKDVLVLNVQDPFQRLLLHGVCEFYNVTSTTTGTVQDGKPWKTTTIKKRSGT 867
           RAFIED   KDVLVLNVQDPFQRLLLHGVCEFYNV+STTT T++DGK WKTTTIK+R GT
Sbjct: 181 RAFIEDASGKDVLVLNVQDPFQRLLLHGVCEFYNVSSTTTTTMRDGKLWKTTTIKRRPGT 240

Query: 868 GVAPRITLVSFLRTKKNGS 924
           G   R+TLVSFLR KKNGS
Sbjct: 241 GAPSRLTLVSFLRMKKNGS 259



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>AK121573: |
          Length = 367

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 52/72 (72%), Positives = 56/72 (77%)
 Frame = -3

Query: 396 MKTRDKLNQQAIIQPSARPPVTNLGCHVLQGFNLPLDHLPTCLGGSCIAFSGIEQGLVEL 217
           MKT DK N+QAIIQP  R PVTNLG HVL+ FNLPL+HLPT L G   AF G+EQG VEL
Sbjct: 1   MKTGDKFNEQAIIQPPTRSPVTNLGGHVLKNFNLPLNHLPTRLDG-IAAFGGVEQGGVEL 59

Query: 216 LLPPQQIRARHG 181
           LLPPQQI  RHG
Sbjct: 60  LLPPQQI--RHG 69



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>AK066242:Os01g0226500 |
          Length = 435

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
 Frame = +1

Query: 481 EWDAFRSIDMDVEARFMQRMKQSSAKQKN-----LMNEDEL-IVLNAWRRIDCQTREAMK 642
           EW A R I  D+  R ++ MKQ + K+ N     L +E EL +++   + +     + MK
Sbjct: 201 EWRA-RQIAKDMAQRKVENMKQIAKKKANEERKRLESELELALMVEKLQELRSMRVQKMK 259

Query: 643 R--NFLPELLEIYEERIRAFIED 705
           +  +FLPE  + Y ER++A +E+
Sbjct: 260 KQGHFLPEEDDKYLERVKAAVEE 282



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>AK110367: |
          Length = 113

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
 Frame = +2

Query: 17  HTIPPNSNPRN------RTEEGQPQPEQKRKPANPKP 109
           H +PP S PRN      R+E   P P Q+R P +P+P
Sbjct: 38  HPLPPVSRPRNRHTQSPRSERPPPLPPQRRHP-SPRP 73



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>AK107019:Os02g0288100 |
          Length = 554

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 184 WLSA-SRKLLALPSGPLVSAAAMEESRLGVG 95
           WLSA  R+LL +P+ PLV +A M  ++ G G
Sbjct: 215 WLSARDRRLLLVPAAPLVESADMVVAKDGTG 245



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>AK071003:Os02g0751900 |
          Length = 566

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 12  TCTRFPQILTLETERRRASRNRNKSGSQPTPSLDSSIAAA-ETRGPEGSARSLREALNH 185
           TCT      T++   R       +  + P PSL S+ AAA E  GP+      R ++N+
Sbjct: 241 TCTCLTDPSTMQRRAREMREFLYRIEASPPPSLASAAAAADEDGGPDAGGELARSSVNY 299



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>AK063420:Os03g0800100 |
          Length = 373

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 54  RRRASRNRNKSGSQPTP-SLDSSIAAAETRGPEGSARSLREALNHGERGSVAE 209
           RR  SRNR KS  + TP S D+S + A   G +   R +R      ++G V E
Sbjct: 38  RRSRSRNRRKSRRRDTPSSSDASDSQASDSGSDSGGR-VRRRSGSRKKGEVTE 89



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>AF221552: |
          Length = 170

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 2   KPNHVHTIPPNSNPRNRTEEGQPQPEQKRKPANPKP 109
           KP       P   P+ +  + +P+P  K+KP  PKP
Sbjct: 112 KPEPKPEPEPKPEPKPKKPKPEPKPLPKKKPEKPKP 147



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>AK121375:Os01g0672700 |
          Length = 623

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 26  PPNSNPRNRTEEGQPQPEQKRKPANPK 106
           P   N R+ +E+ +P P QKRK + PK
Sbjct: 531 PLPRNTRSSSEDTRPSPTQKRKSSKPK 557



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>Os06g0245700:Os06g0245700 |
          Length = 1173

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 478 QHLSCKMLTVVLPHQMAEGQRGL*FLQHEDEGQAQSASDHSTI 350
           Q L C  L +   H++   +R L   QH D G   +A DH  +
Sbjct: 538 QKLQCVKLPISFSHKLTAARRNLALFQHHD-GVTGTAKDHVVV 579


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 37,428,881
Number of extensions: 871724
Number of successful extensions: 2914
Number of sequences better than 10.0: 11
Number of HSP's gapped: 2890
Number of HSP's successfully gapped: 11
Length of query: 402
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 299
Effective length of database: 11,275,632
Effective search space: 3371413968
Effective search space used: 3371413968
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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