| Clone Name | FLbaf21b03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073054:Os11g0147100 | 395 | e-110 | 2 | Os12g0144000:Os12g0144000 | 390 | e-109 | 3 | AK121573: | 97 | 2e-20 | 4 | AK066242:Os01g0226500 | 33 | 0.40 | 5 | AK110367: | 30 | 2.6 | 6 | AK107019:Os02g0288100 | 29 | 5.8 | 7 | AK071003:Os02g0751900 | 29 | 5.8 | 8 | AK063420:Os03g0800100 | 29 | 5.8 | 9 | AF221552: | 29 | 7.6 | 10 | AK121375:Os01g0672700 | 29 | 7.6 | 11 | Os06g0245700:Os06g0245700 | 28 | 9.9 |
|---|
>AK073054:Os11g0147100 | Length = 246 Score = 395 bits (1016), Expect = e-110 Identities = 201/244 (82%), Positives = 216/244 (88%) Frame = +1 Query: 184 MASADLLRREEEFYESLFDSAKGDAAAAKTRGQMIERKIEALEDMATKVSNRRSRRWLND 363 MASADLLRREEEFY SLFDSAKG A K+RGQMIERKIE LEDMA KVSNRRSRRWLND Sbjct: 1 MASADLLRREEEFYASLFDSAKG-GDAVKSRGQMIERKIEVLEDMAAKVSNRRSRRWLND 59 Query: 364 RLLIELVPRLHVEEIKGLFAPPPFGEEAPLSAFCRTSVGEWDAFRSIDMDVEARFMQRMK 543 RLLIELVPRLHVEEIKGLFAPPP+GEE P+SAFCRTSVGEWDAFRSIDMDVEAR +Q+MK Sbjct: 60 RLLIELVPRLHVEEIKGLFAPPPWGEELPVSAFCRTSVGEWDAFRSIDMDVEARLVQQMK 119 Query: 544 QSSAKQKNLMNEDELIVLNAWRRIDCQTREAMKRNFLPELLEIYEERIRAFIEDNIDKDV 723 QSS KQKN ++ DEL+ LN+W ID QTREA+KRNFLP+LLEIYEER+R FIED KD+ Sbjct: 120 QSSTKQKNHLDRDELVALNSWHHIDRQTREAIKRNFLPDLLEIYEERVRTFIEDTSGKDM 179 Query: 724 LVLNVQDPFQRLLLHGVCEFYNVTSTTTGTVQDGKPWKTTTIKKRSGTGVAPRITLVSFL 903 LVLNVQDPFQRLLLHGVCEFYNV+STTT TV+DGK KTT IKKRSGTG RITLVSFL Sbjct: 180 LVLNVQDPFQRLLLHGVCEFYNVSSTTTTTVRDGKLCKTTAIKKRSGTGAPSRITLVSFL 239 Query: 904 RTKK 915 R KK Sbjct: 240 RMKK 243
>Os12g0144000:Os12g0144000 | Length = 260 Score = 390 bits (1003), Expect = e-109 Identities = 203/259 (78%), Positives = 218/259 (84%), Gaps = 15/259 (5%) Frame = +1 Query: 193 ADLLRREEEFYESLFDSAKGDAAAAKTRGQMIERKIEALEDMATKVSNRRSRRWLNDRLL 372 ADLLRREEEFY SLFDS KG A K+RGQMIERKIE LEDMATKVSNRRSRRWLNDRLL Sbjct: 2 ADLLRREEEFYASLFDSPKG-GDAVKSRGQMIERKIEVLEDMATKVSNRRSRRWLNDRLL 60 Query: 373 IELVPRLHVEEIKGLFAPPPFG---------------EEAPLSAFCRTSVGEWDAFRSID 507 IELVPRLHVEEIKGLFAPPP+G EE P+SAFCRTS GEWDAFRSID Sbjct: 61 IELVPRLHVEEIKGLFAPPPWGLTVWPLNVQICVGSSEELPVSAFCRTSDGEWDAFRSID 120 Query: 508 MDVEARFMQRMKQSSAKQKNLMNEDELIVLNAWRRIDCQTREAMKRNFLPELLEIYEERI 687 MDVEAR MQ+MKQSS KQKN ++ DELI LNAW RID QTREA+KRNFLP+LL+IYE+RI Sbjct: 121 MDVEARLMQQMKQSSTKQKNHVDSDELIALNAWHRIDRQTREAIKRNFLPDLLDIYEDRI 180 Query: 688 RAFIEDNIDKDVLVLNVQDPFQRLLLHGVCEFYNVTSTTTGTVQDGKPWKTTTIKKRSGT 867 RAFIED KDVLVLNVQDPFQRLLLHGVCEFYNV+STTT T++DGK WKTTTIK+R GT Sbjct: 181 RAFIEDASGKDVLVLNVQDPFQRLLLHGVCEFYNVSSTTTTTMRDGKLWKTTTIKRRPGT 240 Query: 868 GVAPRITLVSFLRTKKNGS 924 G R+TLVSFLR KKNGS Sbjct: 241 GAPSRLTLVSFLRMKKNGS 259
>AK121573: | Length = 367 Score = 97.1 bits (240), Expect = 2e-20 Identities = 52/72 (72%), Positives = 56/72 (77%) Frame = -3 Query: 396 MKTRDKLNQQAIIQPSARPPVTNLGCHVLQGFNLPLDHLPTCLGGSCIAFSGIEQGLVEL 217 MKT DK N+QAIIQP R PVTNLG HVL+ FNLPL+HLPT L G AF G+EQG VEL Sbjct: 1 MKTGDKFNEQAIIQPPTRSPVTNLGGHVLKNFNLPLNHLPTRLDG-IAAFGGVEQGGVEL 59 Query: 216 LLPPQQIRARHG 181 LLPPQQI RHG Sbjct: 60 LLPPQQI--RHG 69
>AK066242:Os01g0226500 | Length = 435 Score = 33.1 bits (74), Expect = 0.40 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 8/83 (9%) Frame = +1 Query: 481 EWDAFRSIDMDVEARFMQRMKQSSAKQKN-----LMNEDEL-IVLNAWRRIDCQTREAMK 642 EW A R I D+ R ++ MKQ + K+ N L +E EL +++ + + + MK Sbjct: 201 EWRA-RQIAKDMAQRKVENMKQIAKKKANEERKRLESELELALMVEKLQELRSMRVQKMK 259 Query: 643 R--NFLPELLEIYEERIRAFIED 705 + +FLPE + Y ER++A +E+ Sbjct: 260 KQGHFLPEEDDKYLERVKAAVEE 282
>AK110367: | Length = 113 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%) Frame = +2 Query: 17 HTIPPNSNPRN------RTEEGQPQPEQKRKPANPKP 109 H +PP S PRN R+E P P Q+R P +P+P Sbjct: 38 HPLPPVSRPRNRHTQSPRSERPPPLPPQRRHP-SPRP 73
>AK107019:Os02g0288100 | Length = 554 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Frame = -2 Query: 184 WLSA-SRKLLALPSGPLVSAAAMEESRLGVG 95 WLSA R+LL +P+ PLV +A M ++ G G Sbjct: 215 WLSARDRRLLLVPAAPLVESADMVVAKDGTG 245
>AK071003:Os02g0751900 | Length = 566 Score = 29.3 bits (64), Expect = 5.8 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 12 TCTRFPQILTLETERRRASRNRNKSGSQPTPSLDSSIAAA-ETRGPEGSARSLREALNH 185 TCT T++ R + + P PSL S+ AAA E GP+ R ++N+ Sbjct: 241 TCTCLTDPSTMQRRAREMREFLYRIEASPPPSLASAAAAADEDGGPDAGGELARSSVNY 299
>AK063420:Os03g0800100 | Length = 373 Score = 29.3 bits (64), Expect = 5.8 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +3 Query: 54 RRRASRNRNKSGSQPTP-SLDSSIAAAETRGPEGSARSLREALNHGERGSVAE 209 RR SRNR KS + TP S D+S + A G + R +R ++G V E Sbjct: 38 RRSRSRNRRKSRRRDTPSSSDASDSQASDSGSDSGGR-VRRRSGSRKKGEVTE 89
>AF221552: | Length = 170 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 2 KPNHVHTIPPNSNPRNRTEEGQPQPEQKRKPANPKP 109 KP P P+ + + +P+P K+KP PKP Sbjct: 112 KPEPKPEPEPKPEPKPKKPKPEPKPLPKKKPEKPKP 147
>AK121375:Os01g0672700 | Length = 623 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 26 PPNSNPRNRTEEGQPQPEQKRKPANPK 106 P N R+ +E+ +P P QKRK + PK Sbjct: 531 PLPRNTRSSSEDTRPSPTQKRKSSKPK 557
>Os06g0245700:Os06g0245700 | Length = 1173 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -2 Query: 478 QHLSCKMLTVVLPHQMAEGQRGL*FLQHEDEGQAQSASDHSTI 350 Q L C L + H++ +R L QH D G +A DH + Sbjct: 538 QKLQCVKLPISFSHKLTAARRNLALFQHHD-GVTGTAKDHVVV 579 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,428,881 Number of extensions: 871724 Number of successful extensions: 2914 Number of sequences better than 10.0: 11 Number of HSP's gapped: 2890 Number of HSP's successfully gapped: 11 Length of query: 402 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 299 Effective length of database: 11,275,632 Effective search space: 3371413968 Effective search space used: 3371413968 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)