| Clone Name | FLbaf17p21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001053966.1| Oryza sativa (japonica cultivar-group) Os02g0615500 (Os02g0615500) mRNA, complete cds Length = 3375 Score = 71.9 bits (36), Expect = 2e-08 Identities = 54/60 (90%) Strand = Plus / Plus Query: 2838 tggggacgtatatagtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||||| || |||||||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 2848 tggggatgtttatagttttggaatagtacttctagagatgctgacaggtaaaagaccaac 2907 Score = 46.1 bits (23), Expect = 1.1 Identities = 47/55 (85%) Strand = Plus / Plus Query: 220 aacagaacagacgtgcactcgttgctcgagttcaaagcggctaccaacgacccaa 274 ||||| || ||||||| |||||||||||| |||||||| | |||||||| |||| Sbjct: 287 aacagcacggacgtgctctcgttgctcgatttcaaagccaccaccaacgatccaa 341
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 71.9 bits (36), Expect = 2e-08 Identities = 54/60 (90%) Strand = Plus / Plus Query: 2838 tggggacgtatatagtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||||| || |||||||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 24350157 tggggatgtttatagttttggaatagtacttctagagatgctgacaggtaaaagaccaac 24350216 Score = 60.0 bits (30), Expect = 7e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2852 gtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 24337880 gttttggaatagtacttctagagatgctgacaggtaaaagaccaac 24337925 Score = 48.1 bits (24), Expect = 0.27 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1478 aaaatgaatttgaaggtcccatacctcccacattgggaaaactttcacaactctcaaggc 1537 |||||| ||||||||||| |||||| ||| | |||||||| | | ||| ||||| || || Sbjct: 24336483 aaaatgcatttgaaggtcacataccaccctccttgggaaaccctccactactcttaaagc 24336542 Query: 1538 tggaccttagctataataatctgcaagg 1565 |||| |||| ||| || ||||| ||||| Sbjct: 24336543 tggatcttacctacaacaatcttcaagg 24336570 Score = 48.1 bits (24), Expect = 0.27 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1465 ctttctctagcacaaaatgaatttgaaggtcccatacctcccacattgggaaaactttca 1524 ||||| |||||| | |||| |||||| ||||||||||| || |||||||||| |||||| Sbjct: 24371793 ctttcactagcatataatgcatttgatggtcccataccatcctcattgggaaacctttca 24371852 Score = 46.1 bits (23), Expect = 1.1 Identities = 47/55 (85%) Strand = Plus / Plus Query: 220 aacagaacagacgtgcactcgttgctcgagttcaaagcggctaccaacgacccaa 274 ||||| || ||||||| |||||||||||| |||||||| | |||||||| |||| Sbjct: 24347486 aacagcacggacgtgctctcgttgctcgatttcaaagccaccaccaacgatccaa 24347540 Score = 44.1 bits (22), Expect = 4.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2499 taacatagccgacgcattggactatttgcaccat 2532 |||||||||||| ||| |||||||||| |||||| Sbjct: 24372830 taacatagccgatgcactggactatttacaccat 24372863
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 71.9 bits (36), Expect = 2e-08 Identities = 54/60 (90%) Strand = Plus / Plus Query: 2838 tggggacgtatatagtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||||| || |||||||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 79695 tggggatgtttatagttttggaatagtacttctagagatgctgacaggtaaaagaccaac 79754 Score = 60.0 bits (30), Expect = 7e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2852 gtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 67418 gttttggaatagtacttctagagatgctgacaggtaaaagaccaac 67463 Score = 48.1 bits (24), Expect = 0.27 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1478 aaaatgaatttgaaggtcccatacctcccacattgggaaaactttcacaactctcaaggc 1537 |||||| ||||||||||| |||||| ||| | |||||||| | | ||| ||||| || || Sbjct: 66021 aaaatgcatttgaaggtcacataccaccctccttgggaaaccctccactactcttaaagc 66080 Query: 1538 tggaccttagctataataatctgcaagg 1565 |||| |||| ||| || ||||| ||||| Sbjct: 66081 tggatcttacctacaacaatcttcaagg 66108 Score = 48.1 bits (24), Expect = 0.27 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1465 ctttctctagcacaaaatgaatttgaaggtcccatacctcccacattgggaaaactttca 1524 ||||| |||||| | |||| |||||| ||||||||||| || |||||||||| |||||| Sbjct: 101331 ctttcactagcatataatgcatttgatggtcccataccatcctcattgggaaacctttca 101390 Score = 46.1 bits (23), Expect = 1.1 Identities = 47/55 (85%) Strand = Plus / Plus Query: 220 aacagaacagacgtgcactcgttgctcgagttcaaagcggctaccaacgacccaa 274 ||||| || ||||||| |||||||||||| |||||||| | |||||||| |||| Sbjct: 77024 aacagcacggacgtgctctcgttgctcgatttcaaagccaccaccaacgatccaa 77078 Score = 44.1 bits (22), Expect = 4.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2499 taacatagccgacgcattggactatttgcaccat 2532 |||||||||||| ||| |||||||||| |||||| Sbjct: 102368 taacatagccgatgcactggactatttacaccat 102401
>dbj|AK100073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D14, full insert sequence Length = 3376 Score = 71.9 bits (36), Expect = 2e-08 Identities = 54/60 (90%) Strand = Plus / Plus Query: 2838 tggggacgtatatagtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||||| || |||||||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 2849 tggggatgtttatagttttggaatagtacttctagagatgctgacaggtaaaagaccaac 2908 Score = 46.1 bits (23), Expect = 1.1 Identities = 47/55 (85%) Strand = Plus / Plus Query: 220 aacagaacagacgtgcactcgttgctcgagttcaaagcggctaccaacgacccaa 274 ||||| || ||||||| |||||||||||| |||||||| | |||||||| |||| Sbjct: 288 aacagcacggacgtgctctcgttgctcgatttcaaagccaccaccaacgatccaa 342
>ref|NM_001053964.1| Oryza sativa (japonica cultivar-group) Os02g0615300 (Os02g0615300) mRNA, complete cds Length = 2994 Score = 60.0 bits (30), Expect = 7e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 2852 gtttcggaatagtacttttggagatgctgacaggaaaaagaccaac 2897 |||| |||||||||||| | |||||||||||||| ||||||||||| Sbjct: 2618 gttttggaatagtacttctagagatgctgacaggtaaaagaccaac 2663 Score = 48.1 bits (24), Expect = 0.27 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1478 aaaatgaatttgaaggtcccatacctcccacattgggaaaactttcacaactctcaaggc 1537 |||||| ||||||||||| |||||| ||| | |||||||| | | ||| ||||| || || Sbjct: 1331 aaaatgcatttgaaggtcacataccaccctccttgggaaaccctccactactcttaaagc 1390 Query: 1538 tggaccttagctataataatctgcaagg 1565 |||| |||| ||| || ||||| ||||| Sbjct: 1391 tggatcttacctacaacaatcttcaagg 1418
>ref|NM_001053967.1| Oryza sativa (japonica cultivar-group) Os02g0615800 (Os02g0615800) mRNA, complete cds Length = 3475 Score = 48.1 bits (24), Expect = 0.27 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1465 ctttctctagcacaaaatgaatttgaaggtcccatacctcccacattgggaaaactttca 1524 ||||| |||||| | |||| |||||| ||||||||||| || |||||||||| |||||| Sbjct: 1496 ctttcactagcatataatgcatttgatggtcccataccatcctcattgggaaacctttca 1555 Score = 44.1 bits (22), Expect = 4.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2499 taacatagccgacgcattggactatttgcaccat 2532 |||||||||||| ||| |||||||||| |||||| Sbjct: 2533 taacatagccgatgcactggactatttacaccat 2566
>dbj|AK111664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154A15, full insert sequence Length = 2210 Score = 48.1 bits (24), Expect = 0.27 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1465 ctttctctagcacaaaatgaatttgaaggtcccatacctcccacattgggaaaactttca 1524 ||||| |||||| | |||| |||||| ||||||||||| || |||||||||| |||||| Sbjct: 214 ctttcactagcatataatgcatttgatggtcccataccatcctcattgggaaacctttca 273 Score = 44.1 bits (22), Expect = 4.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2499 taacatagccgacgcattggactatttgcaccat 2532 |||||||||||| ||| |||||||||| |||||| Sbjct: 1251 taacatagccgatgcactggactatttacaccat 1284
>dbj|AK065018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F17, full insert sequence Length = 3475 Score = 48.1 bits (24), Expect = 0.27 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1465 ctttctctagcacaaaatgaatttgaaggtcccatacctcccacattgggaaaactttca 1524 ||||| |||||| | |||| |||||| ||||||||||| || |||||||||| |||||| Sbjct: 1496 ctttcactagcatataatgcatttgatggtcccataccatcctcattgggaaacctttca 1555 Score = 44.1 bits (22), Expect = 4.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2499 taacatagccgacgcattggactatttgcaccat 2532 |||||||||||| ||| |||||||||| |||||| Sbjct: 2533 taacatagccgatgcactggactatttacaccat 2566
>ref|NM_001065321.1| Oryza sativa (japonica cultivar-group) Os07g0121200 (Os07g0121200) mRNA, complete cds Length = 3027 Score = 46.1 bits (23), Expect = 1.1 Identities = 32/35 (91%) Strand = Plus / Plus Query: 2401 ttcatgcccaatgggaacttggacacttggttgca 2435 |||||||||||||| |||||||| |||||| |||| Sbjct: 2338 ttcatgcccaatggcaacttggatacttggctgca 2372
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 46.1 bits (23), Expect = 1.1 Identities = 23/23 (100%) Strand = Plus / Plus Query: 152 tggcgtttctgctgctgctgctg 174 ||||||||||||||||||||||| Sbjct: 19265667 tggcgtttctgctgctgctgctg 19265689 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 gcgtttctgctgctgctgctgt 175 |||||||||||||||||||||| Sbjct: 22030066 gcgtttctgctgctgctgctgt 22030045
>ref|NM_113466.1| Arabidopsis thaliana protein binding (AT3G25670) mRNA, complete cds Length = 1428 Score = 46.1 bits (23), Expect = 1.1 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1248 tctacacatgaatggaaacaatctatcagga 1278 |||| |||| ||||||||||||||||||||| Sbjct: 1086 tctatacatcaatggaaacaatctatcagga 1116
>gb|AC011299.3| Homo sapiens BAC clone RP11-232C20 from 7, complete sequence Length = 147712 Score = 46.1 bits (23), Expect = 1.1 Identities = 26/27 (96%) Strand = Plus / Minus Query: 4246 aaaacaaattaacaaaaacgagaaaac 4272 ||||||||||||||||||| ||||||| Sbjct: 141228 aaaacaaattaacaaaaactagaaaac 141202
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 1.1 Identities = 32/35 (91%) Strand = Plus / Minus Query: 2401 ttcatgcccaatgggaacttggacacttggttgca 2435 |||||||||||||| |||||||| |||||| |||| Sbjct: 1117572 ttcatgcccaatggcaacttggatacttggctgca 1117538
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 1.1 Identities = 23/23 (100%) Strand = Plus / Plus Query: 313 tgcaactggacgggcgtcagatg 335 ||||||||||||||||||||||| Sbjct: 4337740 tgcaactggacgggcgtcagatg 4337762
>gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR10I09, complete sequence Length = 169289 Score = 46.1 bits (23), Expect = 1.1 Identities = 23/23 (100%) Strand = Plus / Plus Query: 152 tggcgtttctgctgctgctgctg 174 ||||||||||||||||||||||| Sbjct: 95209 tggcgtttctgctgctgctgctg 95231
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 46.1 bits (23), Expect = 1.1 Identities = 23/23 (100%) Strand = Plus / Plus Query: 313 tgcaactggacgggcgtcagatg 335 ||||||||||||||||||||||| Sbjct: 29320 tgcaactggacgggcgtcagatg 29342
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 46.1 bits (23), Expect = 1.1 Identities = 32/35 (91%) Strand = Plus / Minus Query: 2401 ttcatgcccaatgggaacttggacacttggttgca 2435 |||||||||||||| |||||||| |||||| |||| Sbjct: 19179 ttcatgcccaatggcaacttggatacttggctgca 19145
>dbj|AP001313.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:T5M7 Length = 65177 Score = 46.1 bits (23), Expect = 1.1 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1248 tctacacatgaatggaaacaatctatcagga 1278 |||| |||| ||||||||||||||||||||| Sbjct: 46747 tctatacatcaatggaaacaatctatcagga 46717
>dbj|AK068010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F19, full insert sequence Length = 2701 Score = 46.1 bits (23), Expect = 1.1 Identities = 47/55 (85%) Strand = Plus / Plus Query: 220 aacagaacagacgtgcactcgttgctcgagttcaaagcggctaccaacgacccaa 274 ||||| || ||||||| |||||||||||| |||||||| | |||||||| |||| Sbjct: 272 aacagcacggacgtgctctcgttgctcgatttcaaagccaccaccaacgatccaa 326
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 46.1 bits (23), Expect = 1.1 Identities = 32/35 (91%) Strand = Plus / Minus Query: 2401 ttcatgcccaatgggaacttggacacttggttgca 2435 |||||||||||||| |||||||| |||||| |||| Sbjct: 115160 ttcatgcccaatggcaacttggatacttggctgca 115126
>gb|AC191447.7| Rhesus Macaque BAC CH250-142A15 () complete sequence Length = 191837 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3980 aaagagtggaagagtgcaggag 4001 |||||||||||||||||||||| Sbjct: 107865 aaagagtggaagagtgcaggag 107844
>gb|AC190249.3| Pan troglodytes BAC clone CH251-261D2 from chromosome 7, complete sequence Length = 177117 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2742 ttctaagtgttttgcatataat 2763 |||||||||||||||||||||| Sbjct: 46737 ttctaagtgttttgcatataat 46758
>ref|NM_001058818.1| Oryza sativa (japonica cultivar-group) Os04g0227000 (Os04g0227000) mRNA, partial cds Length = 3016 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2552 tccattgtgatttgaagccgag 2573 |||||||||||||||||||||| Sbjct: 2405 tccattgtgatttgaagccgag 2426
>gb|AC189479.1| Brassica rapa subsp. pekinensis clone KBrB081M20, complete sequence Length = 134187 Score = 44.1 bits (22), Expect = 4.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2729 aaatgattagtttttctaagtgtttt 2754 |||||||||||||||| ||||||||| Sbjct: 68262 aaatgattagtttttcaaagtgtttt 68237
>ref|XM_623424.2| PREDICTED: Apis mellifera similar to Probable cytochrome P450 6a14 (CYPVIA14), transcript variant 1 (LOC551028), mRNA Length = 2120 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3387 cattggcaattttatggaagta 3408 |||||||||||||||||||||| Sbjct: 256 cattggcaattttatggaagta 277
>ref|XM_623458.2| PREDICTED: Apis mellifera similar to Probable cytochrome P450 6a14 (CYPVIA14), transcript variant 2 (LOC551028), mRNA Length = 2158 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3387 cattggcaattttatggaagta 3408 |||||||||||||||||||||| Sbjct: 294 cattggcaattttatggaagta 315
>gb|AC161863.21| Medicago truncatula clone mth2-175f4, complete sequence Length = 116069 Score = 44.1 bits (22), Expect = 4.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1767 taatgatttgtcaggtgtcatcccaa 1792 ||||||||||||||| |||||||||| Sbjct: 92685 taatgatttgtcaggagtcatcccaa 92710
>gb|AC013351.7| Drosophila melanogaster clone BACR06H06, complete sequence Length = 186935 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 gcgtttctgctgctgctgctgt 175 |||||||||||||||||||||| Sbjct: 18574 gcgtttctgctgctgctgctgt 18553
>gb|AF092920.1| Hydra viridis head-activator binding protein precursor (HAB) mRNA, complete cds Length = 5359 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2993 atgaatgcaatggtggcatcga 3014 |||||||||||||||||||||| Sbjct: 2156 atgaatgcaatggtggcatcga 2177
>gb|AC121790.2| Mus musculus BAC clone RP23-399J19 from 1, complete sequence Length = 190623 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ctatggagctggcaacatccat 198 |||||||||||||||||||||| Sbjct: 62303 ctatggagctggcaacatccat 62282
>gb|AC015994.13| Homo sapiens, clone RP11-328A22, complete sequence Length = 163186 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 aataccaccatccttctttaat 849 |||||||||||||||||||||| Sbjct: 143296 aataccaccatccttctttaat 143275
>gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, complete sequence Length = 180232 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 828 aataccaccatccttctttaat 849 |||||||||||||||||||||| Sbjct: 123496 aataccaccatccttctttaat 123517
>ref|NM_070186.3| Caenorhabditis elegans Pelle/IL-1 receptor associated Kinase (IRAK) family member (pik-1) (pik-1) mRNA, complete cds Length = 1463 Score = 44.1 bits (22), Expect = 4.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2848 tatagtttcggaatagtacttttgga 2873 |||||||| ||||||||||||||||| Sbjct: 1155 tatagttttggaatagtacttttgga 1180
>gb|AE012264.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 172 of 460 of the complete genome Length = 10638 Score = 44.1 bits (22), Expect = 4.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2276 aaggaagttttgcattagaatgcaaagcat 2305 |||| |||||||||||| |||||||||||| Sbjct: 4114 aaggcagttttgcattacaatgcaaagcat 4143
>tpg|BK000143.1| TPA_exp: Homo sapiens chromosome 2 class II basic helix-loop-helix protein TCF23 gene, complete cds Length = 5880 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3980 aaagagtggaagagtgcaggag 4001 |||||||||||||||||||||| Sbjct: 4963 aaagagtggaagagtgcaggag 4942
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 tttctgctgctgctgctgtcct 178 |||||||||||||||||||||| Sbjct: 20734696 tttctgctgctgctgctgtcct 20734675
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2552 tccattgtgatttgaagccgag 2573 |||||||||||||||||||||| Sbjct: 8468333 tccattgtgatttgaagccgag 8468354
>gb|AC080079.5| Homo sapiens BAC clone RP11-511B7 from 4, complete sequence Length = 112516 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3357 gcaatcatcttctatttttcct 3378 |||||||||||||||||||||| Sbjct: 37847 gcaatcatcttctatttttcct 37868
>gb|AF348167.1|AF348167 Caenorhabditis elegans Pelle IRAK-like kinase 1 mRNA, complete cds Length = 1485 Score = 44.1 bits (22), Expect = 4.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2848 tatagtttcggaatagtacttttgga 2873 |||||||| ||||||||||||||||| Sbjct: 1177 tatagttttggaatagtacttttgga 1202
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 4.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2276 aaggaagttttgcattagaatgcaaagcat 2305 |||| |||||||||||| |||||||||||| Sbjct: 3138449 aaggcagttttgcattacaatgcaaagcat 3138420
>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09, complete sequence Length = 123375 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2552 tccattgtgatttgaagccgag 2573 |||||||||||||||||||||| Sbjct: 81708 tccattgtgatttgaagccgag 81729
>emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0071D01, complete sequence Length = 78794 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2552 tccattgtgatttgaagccgag 2573 |||||||||||||||||||||| Sbjct: 902 tccattgtgatttgaagccgag 923
>gb|AC156015.2| Mus musculus BAC clone RP24-345H1 from chromosome 16, complete sequence Length = 154624 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1441 ggcaacctttcagaactgacaa 1462 |||||||||||||||||||||| Sbjct: 131588 ggcaacctttcagaactgacaa 131609
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 tttctgctgctgctgctgtcct 178 |||||||||||||||||||||| Sbjct: 128307 tttctgctgctgctgctgtcct 128286
>gb|AC013403.9| Homo sapiens BAC clone RP11-195B17 from 2, complete sequence Length = 159707 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3980 aaagagtggaagagtgcaggag 4001 |||||||||||||||||||||| Sbjct: 94213 aaagagtggaagagtgcaggag 94192
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 tttctgctgctgctgctgtcct 178 |||||||||||||||||||||| Sbjct: 9725 tttctgctgctgctgctgtcct 9704
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 44.1 bits (22), Expect = 4.2 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1471 ctagcacaaaatgaatttgaaggtcccatacctcccacattgggaaaactttca 1524 |||||| | |||| |||||| ||||||||||| || |||||||||| |||||| Sbjct: 5 ctagcatataatgcatttgatggtcccataccatcctcattgggaaacctttca 58 Score = 44.1 bits (22), Expect = 4.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2499 taacatagccgacgcattggactatttgcaccat 2532 |||||||||||| ||| |||||||||| |||||| Sbjct: 1036 taacatagccgatgcactggactatttacaccat 1069
>dbj|AK111733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E19, full insert sequence Length = 3017 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2552 tccattgtgatttgaagccgag 2573 |||||||||||||||||||||| Sbjct: 2406 tccattgtgatttgaagccgag 2427
>gb|AC154814.2| Mus musculus BAC clone RP24-532L22 from 16, complete sequence Length = 155332 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1441 ggcaacctttcagaactgacaa 1462 |||||||||||||||||||||| Sbjct: 17312 ggcaacctttcagaactgacaa 17333
>gb|AC006415.11|AC006415 Drosophila melanogaster, chromosome 2L, region 40B-40C, BAC clone BACR22A22, complete sequence Length = 162345 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 gcgtttctgctgctgctgctgt 175 |||||||||||||||||||||| Sbjct: 124014 gcgtttctgctgctgctgctgt 123993
>emb|Z83114.1|CEK09B11 Caenorhabditis elegans Cosmid K09B11, complete sequence Length = 38801 Score = 44.1 bits (22), Expect = 4.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2848 tatagtttcggaatagtacttttgga 2873 |||||||| ||||||||||||||||| Sbjct: 5251 tatagttttggaatagtacttttgga 5276
>gb|AC147128.3| Mus musculus BAC clone RP24-178K6 from 1, complete sequence Length = 158485 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ctatggagctggcaacatccat 198 |||||||||||||||||||||| Sbjct: 93971 ctatggagctggcaacatccat 93950
>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete sequence Length = 228391 Score = 44.1 bits (22), Expect = 4.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4242 tctcaaaacaaattaacaaaaa 4263 |||||||||||||||||||||| Sbjct: 134556 tctcaaaacaaattaacaaaaa 134577 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 784,108,977 Number of extensions: 40831662 Number of successful extensions: 353007 Number of sequences better than 10.0: 53 Number of HSP's gapped: 353007 Number of HSP's successfully gapped: 71 Length of query: 4331 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 4307 Effective length of database: 18,499,340,271 Effective search space: 79676658547197 Effective search space used: 79676658547197 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)