ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf15n14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121205:Os04g0408700 73 1e-13
2AK058627:Os04g0408900 59 2e-09
3AK072291:Os04g0408900 57 1e-08
4AK107990:Os07g0613600 29 2.6
5Os05g0478200:Os05g0478200 28 4.5
6Os12g0510300:Os12g0510300 27 9.9
7AK111692:Os08g0249100 27 9.9

>AK121205:Os04g0408700 |
          Length = 80
 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 40/80 (50%), Positives = 44/80 (55%)
 Frame = +1

Query: 109 MAEQFAESANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXX 288
           MA+QFA+SANNV+IEEVNKGLNPGMI              GNYALY+YAQ          
Sbjct: 1   MADQFADSANNVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKP 60

Query: 289 XXXXXXXXXXXXQGVSAPGE 348
                       QGVSAPGE
Sbjct: 61  VSKKKMKREKLKQGVSAPGE 80



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>AK058627:Os04g0408900 |
          Length = 76

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 33/75 (44%), Positives = 37/75 (49%)
 Frame = +1

Query: 124 AESANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXX 303
           A+ +NN+IIEEVNKGLNPG I              GNYALY+YAQ               
Sbjct: 2   ADQSNNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKK 61

Query: 304 XXXXXXXQGVSAPGE 348
                  QGVSAPGE
Sbjct: 62  LKREKLKQGVSAPGE 76



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>AK072291:Os04g0408900 |
          Length = 97

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 32/71 (45%), Positives = 34/71 (47%)
 Frame = +1

Query: 136 NNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXX 315
           NN+IIEEVNKGLNPG I              GNYALY+YAQ                   
Sbjct: 27  NNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLKRE 86

Query: 316 XXXQGVSAPGE 348
              QGVSAPGE
Sbjct: 87  KLKQGVSAPGE 97



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>AK107990:Os07g0613600 |
          Length = 85

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = -1

Query: 250 TGRAHSSQQRRAAGRSQPQAGRSFQGSGPCSPLR**HCSLTPRTAPPWRKRDLDQAPRPP 71
           +GR+ +    R  GR+ P       G  PC P R    +L P  +PP ++R    +P  P
Sbjct: 16  SGRSCAFTLCRRGGRTLPPGST---GRTPCRPCR---RALLPPPSPPAQRRRRRPSPEQP 69

Query: 70  H 68
           H
Sbjct: 70  H 70



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>Os05g0478200:Os05g0478200 |
          Length = 371

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -1

Query: 217 AAGRSQPQAGRSFQGSGPCSPLR**HCSLTPRTAPPWRKRDLDQAPRPPHLLCEQLG 47
           AAG S  ++ +S  G  P +         T    PP  K   DQ P PP  + E  G
Sbjct: 48  AAGGSHKESAKSSNGQNPVT-------KETHHQTPPPAKPPKDQTPPPPPAVSESKG 97



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>Os12g0510300:Os12g0510300 |
          Length = 209

 Score = 26.9 bits (58), Expect = 9.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 118 APPWRKRDLDQAPRPPHLLC 59
           APP R+R    AP PP  LC
Sbjct: 105 APPRRRRSTRTAPSPPRRLC 124



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>AK111692:Os08g0249100 |
          Length = 601

 Score = 26.9 bits (58), Expect = 9.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -2

Query: 123 ELLRHGGNGIWTRHHALLTSFASSWGPFLRS 31
           E+ R G NGIW R      S    W PFLRS
Sbjct: 237 EVSRRGQNGIWRR-----LSDMKLWLPFLRS 262


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,221,068
Number of extensions: 323774
Number of successful extensions: 798
Number of sequences better than 10.0: 7
Number of HSP's gapped: 795
Number of HSP's successfully gapped: 7
Length of query: 195
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 100
Effective length of database: 11,595,960
Effective search space: 1159596000
Effective search space used: 1159596000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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