| Clone Name | FLbaf15n14 |
|---|---|
| Clone Library Name | barley_pub |
>Q7XLX6:S1FA2_ORYSJ DNA-binding protein S1FA2 - Oryza sativa subsp. japonica (Rice)| Length = 80 Score = 73.2 bits (178), Expect = 7e-13 Identities = 40/80 (50%), Positives = 44/80 (55%) Frame = +1 Query: 109 MAEQFAESANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXX 288 MA+QFA+SANNV+IEEVNKGLNPGMI GNYALY+YAQ Sbjct: 1 MADQFADSANNVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKP 60 Query: 289 XXXXXXXXXXXXQGVSAPGE 348 QGVSAPGE Sbjct: 61 VSKKKMKREKLKQGVSAPGE 80
>P42553:S1FA1_ORYSJ DNA-binding protein S1FA1 - Oryza sativa subsp. japonica (Rice)| Length = 76 Score = 59.3 bits (142), Expect = 1e-08 Identities = 33/75 (44%), Positives = 37/75 (49%) Frame = +1 Query: 124 AESANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXX 303 A+ +NN+IIEEVNKGLNPG I GNYALY+YAQ Sbjct: 2 ADQSNNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKK 61 Query: 304 XXXXXXXQGVSAPGE 348 QGVSAPGE Sbjct: 62 LKREKLKQGVSAPGE 76
>P42554:S1FA_MAIZE DNA-binding protein S1FA - Zea mays (Maize)| Length = 63 Score = 43.9 bits (102), Expect = 4e-04 Identities = 26/63 (41%), Positives = 27/63 (42%) Frame = +1 Query: 160 NKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSA 339 NKGLNPGM+ GNYALY YAQ QGVSA Sbjct: 1 NKGLNPGMVVXLVVASFLLIFFVGNYALYXYAQKTLPPKKKKPVSKKKLKKEKLKQGVSA 60 Query: 340 PGE 348 PGE Sbjct: 61 PGE 63
>Q42337:S1FA2_ARATH DNA-binding protein S1FA2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 76 Score = 35.8 bits (81), Expect = 0.12 Identities = 22/73 (30%), Positives = 27/73 (36%) Frame = +1 Query: 130 SANNVIIEEVNKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXX 309 SA ++E KGLNPG+I NY +Y+YAQ Sbjct: 6 SAGKAVVEA--KGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLK 63 Query: 310 XXXXXQGVSAPGE 348 QGV PGE Sbjct: 64 REKLKQGVPVPGE 76
>Q93VI0:S1FA3_ARATH DNA-binding protein S1FA3 - Arabidopsis thaliana (Mouse-ear cress)| Length = 73 Score = 34.7 bits (78), Expect = 0.26 Identities = 20/63 (31%), Positives = 23/63 (36%) Frame = +1 Query: 160 NKGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSA 339 +KGLNPG+I GN+ LY YAQ QGV Sbjct: 11 SKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGVQV 70 Query: 340 PGE 348 PGE Sbjct: 71 PGE 73
>P42552:S1FA_SPIOL DNA-binding protein S1FA - Spinacia oleracea (Spinach)| Length = 70 Score = 34.3 bits (77), Expect = 0.34 Identities = 20/62 (32%), Positives = 23/62 (37%) Frame = +1 Query: 163 KGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSAP 342 KGLNPG+I GN+ LY YAQ QGV+ P Sbjct: 9 KGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLKQGVAPP 68 Query: 343 GE 348 GE Sbjct: 69 GE 70
>P42551:S1FA1_ARATH DNA-binding protein S1FA1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 76 Score = 34.3 bits (77), Expect = 0.34 Identities = 20/62 (32%), Positives = 22/62 (35%) Frame = +1 Query: 163 KGLNPGMIXXXXXXXXXXXXXXGNYALYLYAQXXXXXXXXXXXXXXXXXXXXXXQGVSAP 342 KGLNPG+I NY LY+YAQ QGV P Sbjct: 15 KGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVPVP 74 Query: 343 GE 348 GE Sbjct: 75 GE 76
>Q96C00:ZBTB9_HUMAN Zinc finger and BTB domain-containing protein 9 - Homo sapiens| (Human) Length = 473 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 4/44 (9%) Frame = -2 Query: 129 LRELLRHGGNGIWTR----HHALLTSFASSWGPFLRSAPFPLPV 10 LREL GG GI R +HALL++ +S+ G +RS+PF PV Sbjct: 138 LRELETSGG-GISARGGNSYHALLSTTSSTGGWCIRSSPFQTPV 180
>Q9RP48:GLGE_MYCS2 Putative glucanase glgE - Mycobacterium smegmatis (strain ATCC| 700084 / mc(2)155) Length = 697 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -2 Query: 195 KQDDHSRVQALVHLFDDDIVR*LRELLRHGGNGIWTRHHALLTSFASSWGPF 40 K DH+R V+ D L E L+HGG G++ L ++ +SSWG + Sbjct: 484 KYADHARPNLWVNTPDI-----LHESLQHGGPGMFAIRAVLASTMSSSWGVY 530
>Q96P88:GNRR2_HUMAN Gonadotropin-releasing hormone II receptor - Homo sapiens (Human)| Length = 379 Score = 30.0 bits (66), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 368 LMSIALCWAPFYLIKKTYQLEPQRLFM*KPCLEWYIVGIGHL 493 L++ LCW P+YL+ Y P L P L + +G L Sbjct: 270 LLTFILCWTPYYLLGMWYWFSPTMLTEVPPSLSHILFLLGLL 311 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 90,347,472 Number of extensions: 1759303 Number of successful extensions: 4401 Number of sequences better than 10.0: 10 Number of HSP's gapped: 4398 Number of HSP's successfully gapped: 10 Length of query: 195 Length of database: 100,686,439 Length adjustment: 107 Effective length of query: 88 Effective length of database: 71,336,874 Effective search space: 6277644912 Effective search space used: 6277644912 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)