ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf13a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK101639:Os03g0570800 49 1e-06
2AK107345:Os03g0571700 46 1e-05
3AK120864:Os07g0516600 45 2e-05
4AK102204:Os03g0572900 42 1e-04
5Os03g0571900:Os03g0571900 40 8e-04
6AK103815:Os08g0562800 33 0.071
7AK070238:Os08g0550200 30 0.46
8Os11g0129100:Os11g0129100 30 0.60
9AK067521:Os12g0126000 30 0.60
10Os11g0129000:Os11g0129000 28 1.7
11AK122186:Os01g0763300 27 3.8
12AK063778:Os01g0763300 27 3.8
13AK103478:Os09g0468000 27 3.9
14AK067875:Os11g0126100 27 6.6
15Os08g0428800:Os08g0428800 26 8.6
16Os06g0669100:Os06g0669100 26 8.6

>AK101639:Os03g0570800 |
          Length = 500
 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKWEGNKAPLLAG 85
           RTDWNKEV EA+KRL++WE  K PLLAG
Sbjct: 469 RTDWNKEVEEAKKRLNQWEDKKQPLLAG 496



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>AK107345:Os03g0571700 |
          Length = 370

 Score = 45.8 bits (107), Expect = 1e-05
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKWEGNKAPLLAGQE 91
           RTDWN+EVGEA+KRL+KW     PLLA ++
Sbjct: 341 RTDWNREVGEAKKRLNKWGDIAKPLLANED 370



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>AK120864:Os07g0516600 |
          Length = 493

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKWEGNKAPLLAGQE 91
           RTDWNKEV +AR+RL KW+  K PLL  ++
Sbjct: 464 RTDWNKEVEDARRRLDKWDDTKQPLLVNRQ 493



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>AK102204:Os03g0572900 |
          Length = 500

 Score = 42.4 bits (98), Expect = 1e-04
 Identities = 20/29 (68%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKWEG-NKAPLLAG 85
           RTDWN EV EA+KRL+KWE   K PLL G
Sbjct: 467 RTDWNNEVEEAQKRLNKWEDKKKEPLLTG 495



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>Os03g0571900:Os03g0571900 |
          Length = 1098

 Score = 39.7 bits (91), Expect = 8e-04
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +2

Query: 2    RTDWNKEVGEARKRLHKWEGNKAPLLA 82
            RT+WN+EV EA KRL+KWE +K PLL+
Sbjct: 1072 RTNWNREVEEAMKRLNKWE-DKTPLLS 1097



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>AK103815:Os08g0562800 |
          Length = 434

 Score = 33.1 bits (74), Expect = 0.071
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKWEG--NKAPLLAG 85
           RTDW  E  +A  R+HKW G     PLL G
Sbjct: 399 RTDWKAEAAQASARVHKWGGTDETKPLLQG 428



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>AK070238:Os08g0550200 |
          Length = 522

 Score = 30.4 bits (67), Expect = 0.46
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKWEG 61
           RT+WNKE  EA  R+  W G
Sbjct: 493 RTNWNKEASEAHARIQHWGG 512



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>Os11g0129100:Os11g0129100 |
          Length = 231

 Score = 30.0 bits (66), Expect = 0.60
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKW 55
           RTDW K+V  AR+RL++W
Sbjct: 193 RTDWEKQVEIARQRLNRW 210



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>AK067521:Os12g0126000 |
          Length = 507

 Score = 30.0 bits (66), Expect = 0.60
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKW 55
           RTDW K+V  AR+RL++W
Sbjct: 475 RTDWEKQVEIARQRLNRW 492



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>Os11g0129000:Os11g0129000 |
          Length = 425

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKW 55
           RTDW K+V   R+RL++W
Sbjct: 393 RTDWKKQVEITRERLNRW 410



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>AK122186:Os01g0763300 |
          Length = 156

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 201 PYFRSAIPASQPRQHRQSCHVTSKSMALID*CE*DHFFCVRY 326
           P +RSA+P +   +HR    +T  +MA++   E +  + ++Y
Sbjct: 56  PEYRSALPGALEYRHRCPATLTKDTMAVVPTSEPETVYDIKY 97



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>AK063778:Os01g0763300 |
          Length = 158

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 201 PYFRSAIPASQPRQHRQSCHVTSKSMALID*CE*DHFFCVRY 326
           P +RSA+P +   +HR    +T  +MA++   E +  + ++Y
Sbjct: 58  PEYRSALPGALEYRHRCPATLTKDTMAVVPTSEPETVYDIKY 99



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>AK103478:Os09g0468000 |
          Length = 482

 Score = 27.3 bits (59), Expect = 3.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 8   DWNKEVGEARKRLHKWEGNK 67
           DWNKEV +A +R+ +W   K
Sbjct: 463 DWNKEVLQASERVQRWGNPK 482



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>AK067875:Os11g0126100 |
          Length = 497

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 2   RTDWNKEVGEARKRLHKW 55
           RT+W K+V   R+RL++W
Sbjct: 465 RTNWKKQVEITRERLNRW 482



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>Os08g0428800:Os08g0428800 |
          Length = 471

 Score = 26.2 bits (56), Expect = 8.6
 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +1

Query: 187 PPLKFRTSDLLSRLR-NHDSIGNLVMLLVSL 276
           PP++FR S LL  LR N +S G++++  V+L
Sbjct: 407 PPVQFRLSGLLEFLRFNDESYGDVLLSPVTL 437



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>Os06g0669100:Os06g0669100 |
          Length = 1865

 Score = 26.2 bits (56), Expect = 8.6
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
 Frame = -2

Query: 261 HDKIADAVVVAKPG*Q--------IGSTEFQWWIAR*TMHFTHFREINLRTNPISADHIH 106
           H  I+D   V K G +        +G T ++W     ++   HF    ++  P + D +H
Sbjct: 606 HSAISDNGGVMKTGGEYYVYNRNTLGGTSYEWP----SVAPHHFVSPEMQQRPATTDRLH 661

Query: 105 DQLLHSWPA--NRGALLPSH 52
             + + WPA   +  L P+H
Sbjct: 662 LDVGYRWPAQFEQPFLPPNH 681


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,291,856
Number of extensions: 280413
Number of successful extensions: 623
Number of sequences better than 10.0: 16
Number of HSP's gapped: 623
Number of HSP's successfully gapped: 16
Length of query: 140
Length of database: 15,399,855
Length adjustment: 90
Effective length of query: 50
Effective length of database: 11,796,165
Effective search space: 589808250
Effective search space used: 589808250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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