ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf12p19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P44596:HAP1_HAEIN Adhesion and penetration protein precursor - H... 33 0.39
2P06783:STE3_YEAST Pheromone a factor receptor - Saccharomyces ce... 30 1.9

>P44596:HAP1_HAEIN Adhesion and penetration protein precursor - Haemophilus influenzae|
          Length = 1409
 Score = 32.7 bits (73), Expect = 0.39
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = -3

Query: 230 GVQPSCLSTDC-RGEKAAMELCLTIVLRSTR*TNYFP*KWAQ-KINNRNRATVKVINALA 57
           GV P+  +T C R +   +  C T+ L  T+  N  P       IN  N ATV +     
Sbjct: 705 GVVPNQQNTICTRSDWTGLTTCKTVNLTDTKVINSIPITQINGSINLTNNATVNIHGLAK 764

Query: 56  TRTHVTAPDHSSSSMKQN 3
              +VT  DHS  ++  N
Sbjct: 765 LNGNVTLIDHSQFTLSNN 782



to top

>P06783:STE3_YEAST Pheromone a factor receptor - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 470

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -2

Query: 291 RIFNYCLSRFSSALNLLTAAWRTTVLF 211
           ++F Y ++R++   NLL+  W TTVL+
Sbjct: 135 QVFRYGIARYNGCQNLLSPTWITTVLY 161


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 53,348,127
Number of extensions: 984791
Number of successful extensions: 1409
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1405
Number of HSP's successfully gapped: 2
Length of query: 115
Length of database: 100,686,439
Length adjustment: 83
Effective length of query: 32
Effective length of database: 77,919,954
Effective search space: 2493438528
Effective search space used: 2493438528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top