ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf12o18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067929.1| Oryza sativa (japonica cultivar-group) Os08g0262500 (Os08g0262500) mRNA, complete cds Length = 1697 Score = 95.6 bits (48), Expect = 5e-16 Identities = 168/208 (80%) Strand = Plus / Plus Query: 631 ttcggcgtcgacccgggcctcctgtcctcggacatgccgcccatggatgccgctgtcgcc 690 |||||||| ||||| |||| ||||||| ||||||||||| | ||| ||| | | | || Sbjct: 623 ttcggcgtggaccctggccgcctgtccccggacatgccgtcgatgcatgtctcggctgcg 682 Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| |||||||||||| |||| ||||||| ||||||| | | |||||||| Sbjct: 683 atggacacgatcatggaggtggggctgttccggcacaccgtgccgccgtcctgctggaag 742 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 743 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 802 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| ||||||||||||||| Sbjct: 803 cacgtcttcgtctccgagatgatggaga 830 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 304 ttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgcaaacttc 363 |||||||| || ||||| | ||| ||||||||||||||||| ||||||| | |||| | Sbjct: 296 ttcgtcacatgtgaccctgacaatgtccggcacatcttcaccaccaaccatgacaactac 355 Query: 364 cccaagggcgcggagttcgccgccatctttgacatc 399 ||||||||| |||||||||| ||||| |||||| Sbjct: 356 cccaagggccacgagttcgccgagatcttcgacatc 391 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1207 atcgagcgtaagacagcggtcgccagcgacgtgatgccgag 1247 |||||||| ||||| | ||||||| ||||||||||||||| Sbjct: 1172 atcgagcggaagacggtggtcgccgacgacgtgatgccgag 1212 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1549 ctgcacatgaaaaatgggctcatggtgaagctgaagaagcg 1589 ||||| ||||| || ||| ||||||||||| |||||||||| Sbjct: 1520 ctgcagatgaagaacggggtcatggtgaaggtgaagaagcg 1560
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 95.6 bits (48), Expect = 5e-16 Identities = 168/208 (80%) Strand = Plus / Plus Query: 631 ttcggcgtcgacccgggcctcctgtcctcggacatgccgcccatggatgccgctgtcgcc 690 |||||||| ||||| |||| ||||||| ||||||||||| | ||| ||| | | | || Sbjct: 9915801 ttcggcgtggaccctggccgcctgtccccggacatgccgtcgatgcatgtctcggctgcg 9915860 Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| |||||||||||| |||| ||||||| ||||||| | | |||||||| Sbjct: 9915861 atggacacgatcatggaggtggggctgttccggcacaccgtgccgccgtcctgctggaag 9915920 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 9915921 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 9915980 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| ||||||||||||||| Sbjct: 9915981 cacgtcttcgtctccgagatgatggaga 9916008 Score = 89.7 bits (45), Expect = 3e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 661 gacatgccgcccatggatgccgctgtcgccatggacacggtcatggaggtggccttgttt 720 |||||||||||| | | ||||| | |||||||||||| ||||||||||||| |||| | Sbjct: 10045755 gacatgccgcccgcgcacgccgccgccgccatggacaccgtcatggaggtgggcttgatc 10045814 Query: 721 cggcacatcgtgccggcctttggctggaaggtgatgaggcggctaaacatcggcccggaa 780 |||||| ||||||||| | | |||||| |||||| |||| |||||||||||||| Sbjct: 10045815 cggcacgccgtgccggcgtcctggtggaagtcgatgagaaggctcaacatcggcccggag 10045874 Query: 781 aggaagctcgccgcagcgcacacggtgct 809 |||| ||||||||| ||||||| |||||| Sbjct: 10045875 aggaggctcgccgcggcgcacagggtgct 10045903 Score = 87.7 bits (44), Expect = 1e-13 Identities = 122/148 (82%) Strand = Plus / Minus Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| ||||||||||||| |||| ||||||| ||||||| | || |||||||| Sbjct: 9953496 atggacacgatcatggaggtggcactgttccggcacaccgtgccgccgttctgctggaag 9953437 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 9953436 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 9953377 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| |||||||| |||||| Sbjct: 9953376 cacgtcttcgtctccgagatggtggaga 9953349 Score = 85.7 bits (43), Expect = 5e-13 Identities = 163/203 (80%) Strand = Plus / Minus Query: 170 actggccaatagtgggcgtgctcccttcccttgtcgccaacctccacaacttgcacgact 229 ||||||| ||||| || |||||||| |||| ||||||||||| ||| ||||||||||| Sbjct: 9954017 actggccgatagtaggattgctccctaccctcgtcgccaacctgcaccgcttgcacgact 9953958 Query: 230 acctcgccgtcgtcctcgccggatcagggcacaacttcagggcaaccggcccgccgggga 289 ||||| ||| ||||||||||| || || || | ||||| ||| ||||||| ||| || Sbjct: 9953957 acctcaccgacgtcctcgccgcctccggccatagcttcacggcgcacggcccggcggcga 9953898 Query: 290 ccgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcca 349 || |||||| | |||||||| || || || | ||| ||||||||||||||||| ||| Sbjct: 9953897 ccaacatgcggctgttcgtcacatgtgagcctgacaatgtccggcacatcttcaccacca 9953838 Query: 350 accacgcaaacttccccaagggc 372 |||| | |||| |||||||||| Sbjct: 9953837 accatgataactaccccaagggc 9953815 Score = 61.9 bits (31), Expect = 7e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 1385 acgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgccttggcaagg 1444 |||||||||| ||||| || ||||| |||| |||||| |||||||| |||| |||||| Sbjct: 9952822 acgtgccgtcgcacaagttcttggcgttcaactccgggccgaggatgtgccccggcaaga 9952763 Query: 1445 acatctcatttatgcagatgaatactattgtcgcggcaatggtgtggaacttcgatgtgg 1504 |||| | | ||||||||||| || || | || || |||||||||||||||| |||| Sbjct: 9952762 gcatcgccgtgatgcagatgaagaccatcgcggccgcggtggtgtggaacttcgacgtgg 9952703 Query: 1505 agctggttgacgggc 1519 || |||| ||||||| Sbjct: 9952702 aggtggtggacgggc 9952688 Score = 60.0 bits (30), Expect = 3e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||| |||| || ||||| | || ||||||||||||||||| |||||||| | Sbjct: 10045386 cggttcttcatcacatgtgaccctgaaaatgtccggcacatcttcacctccaaccatggc 10045445 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatc 399 |||| |||||||||| |||||||||| ||||| |||||| Sbjct: 10045446 aactaccccaagggccacgagttcgccgagatcttcgacatc 10045487 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 304 ttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgcaaacttc 363 |||||||| || ||||| | ||| ||||||||||||||||| ||||||| | |||| | Sbjct: 9915474 ttcgtcacatgtgaccctgacaatgtccggcacatcttcaccaccaaccatgacaactac 9915533 Query: 364 cccaagggcgcggagttcgccgccatctttgacatc 399 ||||||||| |||||||||| ||||| |||||| Sbjct: 9915534 cccaagggccacgagttcgccgagatcttcgacatc 9915569 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 204 cgccaacctccacaacttgcacgactacctcgccgtcgtcctcgccg 250 ||||||||| |||||| | |||||| ||||||||| ||||||||||| Sbjct: 10045289 cgccaacctacacaacctccacgaccacctcgccggcgtcctcgccg 10045335 Score = 48.1 bits (24), Expect = 0.11 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1484 tggtgtggaacttcgatgtggagctggttgacgggc 1519 |||||||||||||||| |||||| |||| ||||||| Sbjct: 9950914 tggtgtggaacttcgacgtggaggtggtggacgggc 9950879 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1210 gagcgtaagacagcggtcgccagcgacgtgatgccgagtggcca 1253 ||||| ||||| ||||||||| ||||||||||||||| ||||| Sbjct: 10046270 gagcggaagacggcggtcgccgacgacgtgatgccgagcggcca 10046313 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1207 atcgagcgtaagacagcggtcgccagcgacgtgatgccgag 1247 |||||||| ||||| | ||||||| ||||||||||||||| Sbjct: 9916350 atcgagcggaagacggtggtcgccgacgacgtgatgccgag 9916390 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1549 ctgcacatgaaaaatgggctcatggtgaagctgaagaagcg 1589 ||||| ||||| || ||| ||||||||||| |||||||||| Sbjct: 9916698 ctgcagatgaagaacggggtcatggtgaaggtgaagaagcg 9916738
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 95.6 bits (48), Expect = 5e-16 Identities = 168/208 (80%) Strand = Plus / Plus Query: 631 ttcggcgtcgacccgggcctcctgtcctcggacatgccgcccatggatgccgctgtcgcc 690 |||||||| ||||| |||| ||||||| ||||||||||| | ||| ||| | | | || Sbjct: 63048 ttcggcgtggaccctggccgcctgtccccggacatgccgtcgatgcatgtctcggctgcg 63107 Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| |||||||||||| |||| ||||||| ||||||| | | |||||||| Sbjct: 63108 atggacacgatcatggaggtggggctgttccggcacaccgtgccgccgtcctgctggaag 63167 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 63168 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 63227 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| ||||||||||||||| Sbjct: 63228 cacgtcttcgtctccgagatgatggaga 63255 Score = 87.7 bits (44), Expect = 1e-13 Identities = 122/148 (82%) Strand = Plus / Minus Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| ||||||||||||| |||| ||||||| ||||||| | || |||||||| Sbjct: 100743 atggacacgatcatggaggtggcactgttccggcacaccgtgccgccgttctgctggaag 100684 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 100683 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 100624 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| |||||||| |||||| Sbjct: 100623 cacgtcttcgtctccgagatggtggaga 100596 Score = 85.7 bits (43), Expect = 5e-13 Identities = 163/203 (80%) Strand = Plus / Minus Query: 170 actggccaatagtgggcgtgctcccttcccttgtcgccaacctccacaacttgcacgact 229 ||||||| ||||| || |||||||| |||| ||||||||||| ||| ||||||||||| Sbjct: 101264 actggccgatagtaggattgctccctaccctcgtcgccaacctgcaccgcttgcacgact 101205 Query: 230 acctcgccgtcgtcctcgccggatcagggcacaacttcagggcaaccggcccgccgggga 289 ||||| ||| ||||||||||| || || || | ||||| ||| ||||||| ||| || Sbjct: 101204 acctcaccgacgtcctcgccgcctccggccatagcttcacggcgcacggcccggcggcga 101145 Query: 290 ccgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcca 349 || |||||| | |||||||| || || || | ||| ||||||||||||||||| ||| Sbjct: 101144 ccaacatgcggctgttcgtcacatgtgagcctgacaatgtccggcacatcttcaccacca 101085 Query: 350 accacgcaaacttccccaagggc 372 |||| | |||| |||||||||| Sbjct: 101084 accatgataactaccccaagggc 101062 Score = 61.9 bits (31), Expect = 7e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 1385 acgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgccttggcaagg 1444 |||||||||| ||||| || ||||| |||| |||||| |||||||| |||| |||||| Sbjct: 100069 acgtgccgtcgcacaagttcttggcgttcaactccgggccgaggatgtgccccggcaaga 100010 Query: 1445 acatctcatttatgcagatgaatactattgtcgcggcaatggtgtggaacttcgatgtgg 1504 |||| | | ||||||||||| || || | || || |||||||||||||||| |||| Sbjct: 100009 gcatcgccgtgatgcagatgaagaccatcgcggccgcggtggtgtggaacttcgacgtgg 99950 Query: 1505 agctggttgacgggc 1519 || |||| ||||||| Sbjct: 99949 aggtggtggacgggc 99935 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 304 ttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgcaaacttc 363 |||||||| || ||||| | ||| ||||||||||||||||| ||||||| | |||| | Sbjct: 62721 ttcgtcacatgtgaccctgacaatgtccggcacatcttcaccaccaaccatgacaactac 62780 Query: 364 cccaagggcgcggagttcgccgccatctttgacatc 399 ||||||||| |||||||||| ||||| |||||| Sbjct: 62781 cccaagggccacgagttcgccgagatcttcgacatc 62816 Score = 48.1 bits (24), Expect = 0.11 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1484 tggtgtggaacttcgatgtggagctggttgacgggc 1519 |||||||||||||||| |||||| |||| ||||||| Sbjct: 98161 tggtgtggaacttcgacgtggaggtggtggacgggc 98126 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1207 atcgagcgtaagacagcggtcgccagcgacgtgatgccgag 1247 |||||||| ||||| | ||||||| ||||||||||||||| Sbjct: 63597 atcgagcggaagacggtggtcgccgacgacgtgatgccgag 63637 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1549 ctgcacatgaaaaatgggctcatggtgaagctgaagaagcg 1589 ||||| ||||| || ||| ||||||||||| |||||||||| Sbjct: 63945 ctgcagatgaagaacggggtcatggtgaaggtgaagaagcg 63985
>dbj|AK104291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F05, full insert sequence Length = 1694 Score = 95.6 bits (48), Expect = 5e-16 Identities = 168/208 (80%) Strand = Plus / Plus Query: 631 ttcggcgtcgacccgggcctcctgtcctcggacatgccgcccatggatgccgctgtcgcc 690 |||||||| ||||| |||| ||||||| ||||||||||| | ||| ||| | | | || Sbjct: 620 ttcggcgtggaccctggccgcctgtccccggacatgccgtcgatgcatgtctcggctgcg 679 Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| |||||||||||| |||| ||||||| ||||||| | | |||||||| Sbjct: 680 atggacacgatcatggaggtggggctgttccggcacaccgtgccgccgtcctgctggaag 739 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 740 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 799 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| ||||||||||||||| Sbjct: 800 cacgtcttcgtctccgagatgatggaga 827 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 304 ttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgcaaacttc 363 |||||||| || ||||| | ||| ||||||||||||||||| ||||||| | |||| | Sbjct: 293 ttcgtcacatgtgaccctgacaatgtccggcacatcttcaccaccaaccatgacaactac 352 Query: 364 cccaagggcgcggagttcgccgccatctttgacatc 399 ||||||||| |||||||||| ||||| |||||| Sbjct: 353 cccaagggccacgagttcgccgagatcttcgacatc 388 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1207 atcgagcgtaagacagcggtcgccagcgacgtgatgccgag 1247 |||||||| ||||| | ||||||| ||||||||||||||| Sbjct: 1169 atcgagcggaagacggtggtcgccgacgacgtgatgccgag 1209 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1549 ctgcacatgaaaaatgggctcatggtgaagctgaagaagcg 1589 ||||| ||||| || ||| ||||||||||| |||||||||| Sbjct: 1517 ctgcagatgaagaacggggtcatggtgaaggtgaagaagcg 1557
>dbj|AK060990.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C11, full insert sequence Length = 1697 Score = 95.6 bits (48), Expect = 5e-16 Identities = 168/208 (80%) Strand = Plus / Plus Query: 631 ttcggcgtcgacccgggcctcctgtcctcggacatgccgcccatggatgccgctgtcgcc 690 |||||||| ||||| |||| ||||||| ||||||||||| | ||| ||| | | | || Sbjct: 623 ttcggcgtggaccctggccgcctgtccccggacatgccgtcgatgcatgtctcggctgcg 682 Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| |||||||||||| |||| ||||||| ||||||| | | |||||||| Sbjct: 683 atggacacgatcatggaggtggggctgttccggcacaccgtgccgccgtcctgctggaag 742 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 743 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 802 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| ||||||||||||||| Sbjct: 803 cacgtcttcgtctccgagatgatggaga 830 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 304 ttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgcaaacttc 363 |||||||| || ||||| | ||| ||||||||||||||||| ||||||| | |||| | Sbjct: 296 ttcgtcacatgtgaccctgacaatgtccggcacatcttcaccaccaaccatgacaactac 355 Query: 364 cccaagggcgcggagttcgccgccatctttgacatc 399 ||||||||| |||||||||| ||||| |||||| Sbjct: 356 cccaagggccacgagttcgccgagatcttcgacatc 391 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1207 atcgagcgtaagacagcggtcgccagcgacgtgatgccgag 1247 |||||||| ||||| | ||||||| ||||||||||||||| Sbjct: 1172 atcgagcggaagacggtggtcgccgacgacgtgatgccgag 1212 Score = 42.1 bits (21), Expect = 6.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1549 ctgcacatgaaaaatgggctcatggtgaagctgaagaagcg 1589 ||||| ||||| || ||| ||||||||||| |||||||||| Sbjct: 1520 ctgcagatgaagaacggggtcatggtgaaggtgaagaagcg 1560
>emb|CT830183.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA013A05, full insert sequence Length = 1879 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 289 accgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcc 348 ||||| || ||||||||| |||||||||||||| ||||||| || ||||||||||||||| Sbjct: 257 accggcatacggttcttcatcacctgcgacccgtccaacgtgcgccacatcttcacgtcc 316 Query: 349 aaccacgcaaacttccccaaggg 371 ||| |||||||| ||||||||| Sbjct: 317 aacttcgcaaactaccccaaggg 339
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 289 accgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcc 348 ||||| || ||||||||| |||||||||||||| ||||||| || ||||||||||||||| Sbjct: 84136 accggcatacggttcttcatcacctgcgacccgtccaacgtgcgccacatcttcacgtcc 84195 Query: 349 aaccacgcaaacttccccaaggg 371 ||| |||||||| ||||||||| Sbjct: 84196 aacttcgcaaactaccccaaggg 84218 Score = 89.7 bits (45), Expect = 3e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 295 atgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccac 354 |||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||| | Sbjct: 42516 atgcggttcttcttcacctgcgactcggccaatgtccggcacatcttcacctccaacttc 42575 Query: 355 gcaaacttccccaaggg 371 ||||| | ||||||||| Sbjct: 42576 gcaaattaccccaaggg 42592 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 95711 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 95770 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 95771 aactaccccaagggcg 95786 Score = 65.9 bits (33), Expect = 5e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 295 atgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaac 351 |||||| ||||| ||||||||||||| ||||| ||||||||| ||||||| |||||| Sbjct: 50993 atgcggctcttcatcacctgcgacccagccaatgtccggcacgtcttcacctccaac 51049 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Plus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 96829 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 96888 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 96889 cggcaagga 96897
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 289 accgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcc 348 ||||| || ||||||||| |||||||||||||| ||||||| || ||||||||||||||| Sbjct: 2193854 accggcatacggttcttcatcacctgcgacccgtccaacgtgcgccacatcttcacgtcc 2193913 Query: 349 aaccacgcaaacttccccaaggg 371 ||| |||||||| ||||||||| Sbjct: 2193914 aacttcgcaaactaccccaaggg 2193936 Score = 89.7 bits (45), Expect = 3e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 295 atgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccac 354 |||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||| | Sbjct: 2152234 atgcggttcttcttcacctgcgactcggccaatgtccggcacatcttcacctccaacttc 2152293 Query: 355 gcaaacttccccaaggg 371 ||||| | ||||||||| Sbjct: 2152294 gcaaattaccccaaggg 2152310 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 2205429 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 2205488 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 2205489 aactaccccaagggcg 2205504 Score = 77.8 bits (39), Expect = 1e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 687 cgccatggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctg 746 |||||||||| | ||||||||||| | ||| || ||||||| |||||||| || | |||| Sbjct: 2097665 cgccatggacgccgtcatggaggtcggcttcttccggcacaccgtgccggtctcttgctg 2097724 Query: 747 gaaggtgatgaggcggctaaacatcggcccggaaaggaagctc 789 |||| |||||||| | |||| ||||||||||| ||||||||| Sbjct: 2097725 gaagctgatgaggagtctaagaatcggcccggagaggaagctc 2097767 Score = 65.9 bits (33), Expect = 5e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||| || |||||||||| |||||| || |||||||||| |||| ||| Sbjct: 2097276 cggttcttcgtgacgtgcgacccggacaacgtgcgccacatcttcatcaacaacttcgcc 2097335 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatcgcgggtggcagcttcttc 417 |||| ||||||||||| |||||||||| || |||| ||| || ||| | |||||||||| Sbjct: 2097336 aactaccccaagggcgaggagttcgcctccttcttcgacgtcatgggcgacagcttcttc 2097395 Query: 418 a 418 | Sbjct: 2097396 a 2097396 Score = 65.9 bits (33), Expect = 5e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 295 atgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaac 351 |||||| ||||| ||||||||||||| ||||| ||||||||| ||||||| |||||| Sbjct: 2160711 atgcggctcttcatcacctgcgacccagccaatgtccggcacgtcttcacctccaac 2160767 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Plus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 2206547 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 2206606 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 2206607 cggcaagga 2206615
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Minus Query: 289 accgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcc 348 ||||| || ||||||||| |||||||||||||| ||||||| || ||||||||||||||| Sbjct: 132214 accggcatacggttcttcatcacctgcgacccgtccaacgtgcgccacatcttcacgtcc 132155 Query: 349 aaccacgcaaacttccccaaggg 371 ||| |||||||| ||||||||| Sbjct: 132154 aacttcgcaaactaccccaaggg 132132 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Minus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 120639 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 120580 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 120579 aactaccccaagggcg 120564 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Minus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 119521 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 119462 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 119461 cggcaagga 119453
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 89.7 bits (45), Expect = 3e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 661 gacatgccgcccatggatgccgctgtcgccatggacacggtcatggaggtggccttgttt 720 |||||||||||| | | ||||| | |||||||||||| ||||||||||||| |||| | Sbjct: 85657 gacatgccgcccgcgcacgccgccgccgccatggacaccgtcatggaggtgggcttgatc 85716 Query: 721 cggcacatcgtgccggcctttggctggaaggtgatgaggcggctaaacatcggcccggaa 780 |||||| ||||||||| | | |||||| |||||| |||| |||||||||||||| Sbjct: 85717 cggcacgccgtgccggcgtcctggtggaagtcgatgagaaggctcaacatcggcccggag 85776 Query: 781 aggaagctcgccgcagcgcacacggtgct 809 |||| ||||||||| ||||||| |||||| Sbjct: 85777 aggaggctcgccgcggcgcacagggtgct 85805 Score = 60.0 bits (30), Expect = 3e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||| |||| || ||||| | || ||||||||||||||||| |||||||| | Sbjct: 85288 cggttcttcatcacatgtgaccctgaaaatgtccggcacatcttcacctccaaccatggc 85347 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatc 399 |||| |||||||||| |||||||||| ||||| |||||| Sbjct: 85348 aactaccccaagggccacgagttcgccgagatcttcgacatc 85389 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 204 cgccaacctccacaacttgcacgactacctcgccgtcgtcctcgccg 250 ||||||||| |||||| | |||||| ||||||||| ||||||||||| Sbjct: 85191 cgccaacctacacaacctccacgaccacctcgccggcgtcctcgccg 85237 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1210 gagcgtaagacagcggtcgccagcgacgtgatgccgagtggcca 1253 ||||| ||||| ||||||||| ||||||||||||||| ||||| Sbjct: 86172 gagcggaagacggcggtcgccgacgacgtgatgccgagcggcca 86215
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 89.7 bits (45), Expect = 3e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 661 gacatgccgcccatggatgccgctgtcgccatggacacggtcatggaggtggccttgttt 720 |||||||||||| | | ||||| | |||||||||||| ||||||||||||| |||| | Sbjct: 5101 gacatgccgcccgcgcacgccgccgccgccatggacaccgtcatggaggtgggcttgatc 5160 Query: 721 cggcacatcgtgccggcctttggctggaaggtgatgaggcggctaaacatcggcccggaa 780 |||||| ||||||||| | | |||||| |||||| |||| |||||||||||||| Sbjct: 5161 cggcacgccgtgccggcgtcctggtggaagtcgatgagaaggctcaacatcggcccggag 5220 Query: 781 aggaagctcgccgcagcgcacacggtgct 809 |||| ||||||||| ||||||| |||||| Sbjct: 5221 aggaggctcgccgcggcgcacagggtgct 5249 Score = 60.0 bits (30), Expect = 3e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||| |||| || ||||| | || ||||||||||||||||| |||||||| | Sbjct: 4732 cggttcttcatcacatgtgaccctgaaaatgtccggcacatcttcacctccaaccatggc 4791 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatc 399 |||| |||||||||| |||||||||| ||||| |||||| Sbjct: 4792 aactaccccaagggccacgagttcgccgagatcttcgacatc 4833 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 204 cgccaacctccacaacttgcacgactacctcgccgtcgtcctcgccg 250 ||||||||| |||||| | |||||| ||||||||| ||||||||||| Sbjct: 4635 cgccaacctacacaacctccacgaccacctcgccggcgtcctcgccg 4681 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1210 gagcgtaagacagcggtcgccagcgacgtgatgccgagtggcca 1253 ||||| ||||| ||||||||| ||||||||||||||| ||||| Sbjct: 5616 gagcggaagacggcggtcgccgacgacgtgatgccgagcggcca 5659
>dbj|AK240742.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043036O19, full insert sequence Length = 1895 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 335 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 394 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 395 aactaccccaagggcg 410 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Plus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 1453 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 1512 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 1513 cggcaagga 1521
>ref|NM_001067930.1| Oryza sativa (japonica cultivar-group) Os08g0263000 (Os08g0263000) mRNA, complete cds Length = 1503 Score = 87.7 bits (44), Expect = 1e-13 Identities = 122/148 (82%) Strand = Plus / Plus Query: 691 atggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctggaag 750 ||||||||| ||||||||||||| |||| ||||||| ||||||| | || |||||||| Sbjct: 637 atggacacgatcatggaggtggcactgttccggcacaccgtgccgccgttctgctggaag 696 Query: 751 gtgatgaggcggctaaacatcggcccggaaaggaagctcgccgcagcgcacacggtgctg 810 | |||||| ||||| || || || || || |||||||||||||| |||||| ||| |||| Sbjct: 697 gcgatgagacggctcaagattggacccgagaggaagctcgccgcggcgcacgcggcgctg 756 Query: 811 cgcgggttcgttgccgagatgatggaga 838 | || ||||| |||||||| |||||| Sbjct: 757 cacgtcttcgtctccgagatggtggaga 784 Score = 85.7 bits (43), Expect = 5e-13 Identities = 163/203 (80%) Strand = Plus / Plus Query: 170 actggccaatagtgggcgtgctcccttcccttgtcgccaacctccacaacttgcacgact 229 ||||||| ||||| || |||||||| |||| ||||||||||| ||| ||||||||||| Sbjct: 116 actggccgatagtaggattgctccctaccctcgtcgccaacctgcaccgcttgcacgact 175 Query: 230 acctcgccgtcgtcctcgccggatcagggcacaacttcagggcaaccggcccgccgggga 289 ||||| ||| ||||||||||| || || || | ||||| ||| ||||||| ||| || Sbjct: 176 acctcaccgacgtcctcgccgcctccggccatagcttcacggcgcacggcccggcggcga 235 Query: 290 ccgggatgcggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtcca 349 || |||||| | |||||||| || || || | ||| ||||||||||||||||| ||| Sbjct: 236 ccaacatgcggctgttcgtcacatgtgagcctgacaatgtccggcacatcttcaccacca 295 Query: 350 accacgcaaacttccccaagggc 372 |||| | |||| |||||||||| Sbjct: 296 accatgataactaccccaagggc 318 Score = 61.9 bits (31), Expect = 7e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 1385 acgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgccttggcaagg 1444 |||||||||| ||||| || ||||| |||| |||||| |||||||| |||| |||||| Sbjct: 1311 acgtgccgtcgcacaagttcttggcgttcaactccgggccgaggatgtgccccggcaaga 1370 Query: 1445 acatctcatttatgcagatgaatactattgtcgcggcaatggtgtggaacttcgatgtgg 1504 |||| | | ||||||||||| || || | || || |||||||||||||||| |||| Sbjct: 1371 gcatcgccgtgatgcagatgaagaccatcgcggccgcggtggtgtggaacttcgacgtgg 1430 Query: 1505 agctggttgacgggc 1519 || |||| ||||||| Sbjct: 1431 aggtggtggacgggc 1445
>ref|NM_001055455.1| Oryza sativa (japonica cultivar-group) Os03g0140300 (Os03g0140300) mRNA, partial cds Length = 1935 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Minus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 1398 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 1339 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 1338 aactaccccaagggcg 1323 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Minus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 280 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 221 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 220 cggcaagga 212
>ref|NM_001055454.1| Oryza sativa (japonica cultivar-group) Os03g0140400 (Os03g0140400) mRNA, complete cds Length = 1599 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 265 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 324 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 325 aactaccccaagggcg 340 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Plus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 1383 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 1442 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 1443 cggcaagga 1451
>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full insert sequence Length = 1935 Score = 87.7 bits (44), Expect = 1e-13 Identities = 68/76 (89%) Strand = Plus / Minus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||||||||||||||||| |||||| || |||||||||||||||||| || Sbjct: 1398 cggttcttcgtcacctgcgacccggacaacgtgcgccacatcttcacgtccaacttcgac 1339 Query: 358 aacttccccaagggcg 373 |||| ||||||||||| Sbjct: 1338 aactaccccaagggcg 1323 Score = 42.1 bits (21), Expect = 6.7 Identities = 57/69 (82%) Strand = Plus / Minus Query: 1377 gctgcggtacgtgccgtctcacaaatttttggcattcagctccggcccgaggatttgcct 1436 |||||||||||||||||| |||| || | || |||| |||||| ||||||| ||||| Sbjct: 280 gctgcggtacgtgccgtcgaacaagttcgtcgcgttcaactccgggccgaggacatgcct 221 Query: 1437 tggcaagga 1445 |||||||| Sbjct: 220 cggcaagga 212
>ref|NM_001055443.1| Oryza sativa (japonica cultivar-group) Os03g0138200 (Os03g0138200) mRNA, complete cds Length = 1723 Score = 77.8 bits (39), Expect = 1e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 687 cgccatggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctg 746 |||||||||| | ||||||||||| | ||| || ||||||| |||||||| || | |||| Sbjct: 705 cgccatggacgccgtcatggaggtcggcttcttccggcacaccgtgccggtctcttgctg 764 Query: 747 gaaggtgatgaggcggctaaacatcggcccggaaaggaagctc 789 |||| |||||||| | |||| ||||||||||| ||||||||| Sbjct: 765 gaagctgatgaggagtctaagaatcggcccggagaggaagctc 807 Score = 65.9 bits (33), Expect = 5e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||| || |||||||||| |||||| || |||||||||| |||| ||| Sbjct: 316 cggttcttcgtgacgtgcgacccggacaacgtgcgccacatcttcatcaacaacttcgcc 375 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatcgcgggtggcagcttcttc 417 |||| ||||||||||| |||||||||| || |||| ||| || ||| | |||||||||| Sbjct: 376 aactaccccaagggcgaggagttcgcctccttcttcgacgtcatgggcgacagcttcttc 435 Query: 418 a 418 | Sbjct: 436 a 436
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 77.8 bits (39), Expect = 1e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 687 cgccatggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctg 746 |||||||||| | ||||||||||| | ||| || ||||||| |||||||| || | |||| Sbjct: 135076 cgccatggacgccgtcatggaggtcggcttcttccggcacaccgtgccggtctcttgctg 135135 Query: 747 gaaggtgatgaggcggctaaacatcggcccggaaaggaagctc 789 |||| |||||||| | |||| ||||||||||| ||||||||| Sbjct: 135136 gaagctgatgaggagtctaagaatcggcccggagaggaagctc 135178 Score = 65.9 bits (33), Expect = 5e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||| || |||||||||| |||||| || |||||||||| |||| ||| Sbjct: 134687 cggttcttcgtgacgtgcgacccggacaacgtgcgccacatcttcatcaacaacttcgcc 134746 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatcgcgggtggcagcttcttc 417 |||| ||||||||||| |||||||||| || |||| ||| || ||| | |||||||||| Sbjct: 134747 aactaccccaagggcgaggagttcgcctccttcttcgacgtcatgggcgacagcttcttc 134806 Query: 418 a 418 | Sbjct: 134807 a 134807
>dbj|AK105857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H07, full insert sequence Length = 1723 Score = 77.8 bits (39), Expect = 1e-10 Identities = 87/103 (84%) Strand = Plus / Plus Query: 687 cgccatggacacggtcatggaggtggccttgtttcggcacatcgtgccggcctttggctg 746 |||||||||| | ||||||||||| | ||| || ||||||| |||||||| || | |||| Sbjct: 705 cgccatggacgccgtcatggaggtcggcttcttccggcacaccgtgccggtctcttgctg 764 Query: 747 gaaggtgatgaggcggctaaacatcggcccggaaaggaagctc 789 |||| |||||||| | |||| ||||||||||| ||||||||| Sbjct: 765 gaagctgatgaggagtctaagaatcggcccggagaggaagctc 807 Score = 65.9 bits (33), Expect = 5e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 298 cggttcttcgtcacctgcgacccggccaacgtccggcacatcttcacgtccaaccacgca 357 ||||||||||| || |||||||||| |||||| || |||||||||| |||| ||| Sbjct: 316 cggttcttcgtgacgtgcgacccggacaacgtgcgccacatcttcatcaacaacttcgcc 375 Query: 358 aacttccccaagggcgcggagttcgccgccatctttgacatcgcgggtggcagcttcttc 417 |||| ||||||||||| |||||||||| || |||| ||| || ||| | |||||||||| Sbjct: 376 aactaccccaagggcgaggagttcgcctccttcttcgacgtcatgggcgacagcttcttc 435 Query: 418 a 418 | Sbjct: 436 a 436
>gb|AY109756.1| Zea mays CL309_1 mRNA sequence Length = 1914 Score = 75.8 bits (38), Expect = 5e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 277 ggcccgccggggaccgggatgcggttcttcgtcacctgcgacccggccaacgtccggcac 336 ||||||||| | |||| |||| ||||||||||||| |||||| ||||||||||| ||| Sbjct: 294 ggcccgccgcgctccggcatgcagttcttcgtcaccgccgaccccgccaacgtccgccac 353 Query: 337 atcttcacgtccaaccacgcaaacttccccaagggcgcggagttcg 382 ||||||| |||||| ||| |||| |||||||||| | ||||||| Sbjct: 354 gtcttcacctccaacttcgccaactaccccaagggccccgagttcg 399
>gb|AC167549.2| Mus musculus chromosome 18, clone wi1-2525M15, complete sequence Length = 40877 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaagatgaagga 854 |||||| ||||||||||||||||||||| Sbjct: 21253 agatgaaggagaggaggaagatgaagga 21280
>emb|AL022299.1|SPBC29A3 S.pombe chromosome II cosmid c29A3 Length = 42770 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 830 tgatggagaggaggaagatgaagg 853 |||||||||||||||||||||||| Sbjct: 16970 tgatggagaggaggaagatgaagg 16947
>ref|XM_001169209.1| PREDICTED: Pan troglodytes similar to Parathymosin (LOC749487), mRNA Length = 456 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 310 gatggagaggaggaagatgaagg 332
>ref|XM_001094330.1| PREDICTED: Macaca mulatta similar to Parathymosin (LOC705999), partial mRNA Length = 216 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 70 gatggagaggaggaagatgaagg 92
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 837 gaggaggaagatgaaggaacatg 859 ||||||||||||||||||||||| Sbjct: 73145 gaggaggaagatgaaggaacatg 73167
>ref|NM_002824.4| Homo sapiens parathymosin (PTMS), mRNA Length = 1150 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 494 gatggagaggaggaagatgaagg 516
>gb|BC007616.1| Homo sapiens parathymosin, mRNA (cDNA clone IMAGE:3354330), with apparent retained intron Length = 993 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 320 gatggagaggaggaagatgaagg 342
>gb|BC017025.1| Homo sapiens parathymosin, mRNA (cDNA clone MGC:9028 IMAGE:3900998), complete cds Length = 875 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 213 gatggagaggaggaagatgaagg 235
>ref|XM_849320.1| PREDICTED: Canis familiaris similar to Parathymosin (LOC611633), mRNA Length = 868 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 229 gatggagaggaggaagatgaagg 251
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 837 gaggaggaagatgaaggaacatg 859 ||||||||||||||||||||||| Sbjct: 2421048 gaggaggaagatgaaggaacatg 2421070
>gb|AC125494.2| Homo sapiens 12 PAC RP4-761J14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 143979 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 28449 gatggagaggaggaagatgaagg 28427
>gb|AY888602.1| Synthetic construct Homo sapiens clone FLH117691.01X parathymosin (PTMS) mRNA, complete cds Length = 309 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 163 gatggagaggaggaagatgaagg 185
>gb|AY891249.1| Synthetic construct Homo sapiens clone FLH117687.01L parathymosin (PTMS) mRNA, partial cds Length = 309 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 163 gatggagaggaggaagatgaagg 185
>gb|AY893785.1| Synthetic construct Homo sapiens clone FLH053352.01L parathymosin (PTMS) mRNA, partial cds Length = 309 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 163 gatggagaggaggaagatgaagg 185
>gb|AY893340.1| Synthetic construct Homo sapiens clone FLH053356.01X parathymosin (PTMS) mRNA, complete cds Length = 309 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 163 gatggagaggaggaagatgaagg 185
>emb|Y13586.1|HSPTMSLAG Homo sapiens PTMS (exons 3 to 5) and LAG-3 genes Length = 2937 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 48 gatggagaggaggaagatgaagg 70
>gb|M24398.1|HUMTHYP Human parathymosin mRNA, complete cds Length = 1109 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 831 gatggagaggaggaagatgaagg 853 ||||||||||||||||||||||| Sbjct: 463 gatggagaggaggaagatgaagg 485
>gb|AF045641.4| Caenorhabditis elegans cosmid F53H1, complete sequence Length = 42434 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaagatgaag 852 |||||||||||||||||| ||||||| Sbjct: 25259 agatgatggagaggaggaggatgaag 25284
>gb|AC095281.6| Rattus norvegicus 4 BAC CH230-10M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 228330 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1349 atagatggctctcagaggatggcaag 1374 |||||||||||||||||||| ||||| Sbjct: 162072 atagatggctctcagaggatagcaag 162097
>ref|NM_001028046.1| Caenorhabditis elegans F53H1.4a (F53H1.4) mRNA, complete cds Length = 4155 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaagatgaag 852 |||||||||||||||||| ||||||| Sbjct: 2619 agatgatggagaggaggaggatgaag 2644
>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence Length = 126394 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 833 tggagaggaggaagatgaaggaacatgctg 862 ||||||||| ||||||||||||| |||||| Sbjct: 36852 tggagaggaagaagatgaaggaagatgctg 36881
>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence Length = 194860 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 833 tggagaggaggaagatgaaggaacatgctg 862 ||||||||| ||||||||||||| |||||| Sbjct: 17713 tggagaggaagaagatgaaggaagatgctg 17684
>ref|NM_021280.3| Mus musculus phospholipase C, gamma 1 (Plcg1), mRNA Length = 4435 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2956 agatgatggagaggaggaaga 2976
>ref|XR_027198.1| PREDICTED: Gallus gallus similar to PLCG1 variant protein (LOC419175), mRNA Length = 4146 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2624 agatgatggagaggaggaaga 2644
>gb|EF043839.1| Synthetic construct clone ATCC 10627224 phospholipase C-gamma1 mRNA, complete cds Length = 3873 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2822 agatgatggagaggaggaaga 2842
>ref|NM_001054209.1| Oryza sativa (japonica cultivar-group) Os02g0666500 (Os02g0666500) mRNA, complete cds Length = 2117 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1418 ccggcccgaggatttgccttggcaaggac 1446 |||| |||||||||||||| ||||||||| Sbjct: 1494 ccgggccgaggatttgcctcggcaaggac 1522
>emb|CR749178.8| Zebrafish DNA sequence from clone DKEY-220H13 in linkage group 21, complete sequence Length = 102340 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 826 gagatgatggagaggaggaagatga 850 ||||||||| ||||||||||||||| Sbjct: 6451 gagatgatgaagaggaggaagatga 6475
>gb|DQ530348.1| Gallid herpesvirus 2 strain CVI988, complete genome Length = 178311 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 148776 gatgatgaagaggaggaagatgaag 148800 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 171973 gatgatgaagaggaggaagatgaag 171949
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 gttcgacatgaccgccgcgcc 626 ||||||||||||||||||||| Sbjct: 1362407 gttcgacatgaccgccgcgcc 1362387
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 828 gatgatggagaggaggaagat 848 ||||||||||||||||||||| Sbjct: 1076514 gatgatggagaggaggaagat 1076494
>gb|AF147806.2| Gallid herpesvirus 2, complete genome Length = 174077 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 145218 gatgatgaagaggaggaagatgaag 145242 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 167535 gatgatgaagaggaggaagatgaag 167511
>gb|BC065091.1| Mus musculus phospholipase C, gamma 1, mRNA (cDNA clone MGC:86062 IMAGE:6854923), complete cds Length = 4487 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2956 agatgatggagaggaggaaga 2976
>gb|BC063248.1| Danio rerio suppressor of Ty 6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:63881 IMAGE:6789608), complete cds Length = 6385 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 826 gagatgatggagaggaggaagatga 850 ||||||||| ||||||||||||||| Sbjct: 590 gagatgatgaagaggaggaagatga 614
>ref|NM_133892.3| Mus musculus L-amino acid oxidase 1 (Lao1), mRNA gb|BC017599.1| Mus musculus L-amino acid oxidase 1, mRNA (cDNA clone MGC:27574 IMAGE:4487137), complete cds Length = 2338 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 741 tggctggaaggtgatgaggcg 761 ||||||||||||||||||||| Sbjct: 1420 tggctggaaggtgatgaggcg 1400
>ref|XM_454742.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E17633g predicted mRNA Length = 3273 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 752 gatgatgaagaggaggaagatgaag 728
>gb|AC149233.1| Pan troglodytes chromosome X clone RP43-034P07 map human ortholog q28, complete sequence Length = 169963 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 840 gaggaagatgaaggaacatgc 860 ||||||||||||||||||||| Sbjct: 75458 gaggaagatgaaggaacatgc 75438
>gb|BC023198.1| Mus musculus L-amino acid oxidase 1, mRNA (cDNA clone IMAGE:3993838) Length = 1795 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 741 tggctggaaggtgatgaggcg 761 ||||||||||||||||||||| Sbjct: 877 tggctggaaggtgatgaggcg 857
>gb|BC057161.1| Mus musculus cDNA clone IMAGE:5350452 Length = 4401 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2971 agatgatggagaggaggaaga 2991
>gb|AC117263.4| Mus musculus BAC clone RP24-547F18 from chromosome 19, complete sequence Length = 201607 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1611 ccttttcttatttgtatcttgtgtg 1635 |||||||||||||||||||| |||| Sbjct: 198997 ccttttcttatttgtatcttctgtg 198973
>gb|AC122259.2| Mus musculus BAC clone RP23-183E7 from 17, complete sequence Length = 209695 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 ccactgaaggagagccctggc 439 ||||||||||||||||||||| Sbjct: 138478 ccactgaaggagagccctggc 138498
>gb|AC129094.31| Mus musculus strain C57BL/6J clone rp23-306b23 map 17, complete sequence Length = 188078 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 ccactgaaggagagccctggc 439 ||||||||||||||||||||| Sbjct: 157818 ccactgaaggagagccctggc 157838
>gb|AC109610.25| Mus musculus strain C57BL/6J clone rp23-305g19 map 17, complete sequence Length = 194366 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 ccactgaaggagagccctggc 439 ||||||||||||||||||||| Sbjct: 101388 ccactgaaggagagccctggc 101368
>gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication intermediate, complete genome Length = 170950 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 157865 gatgatgaagaggaggaagatgaag 157889
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 805 gtgctgcgcgggttcgttgcc 825 ||||||||||||||||||||| Sbjct: 294901 gtgctgcgcgggttcgttgcc 294921
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 616 accgccgcgccgctcttcggcgtcg 640 ||||||||||||||||||| ||||| Sbjct: 1784394 accgccgcgccgctcttcgtcgtcg 1784418
>gb|BC097046.1| Danio rerio suppressor of Ty 6 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:7433517), partial cds Length = 1565 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 826 gagatgatggagaggaggaagatga 850 ||||||||| ||||||||||||||| Sbjct: 621 gagatgatgaagaggaggaagatga 645
>dbj|AK134041.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830418B16 product:phospholipase C, gamma 1, full insert sequence Length = 4182 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2761 agatgatggagaggaggaaga 2781
>gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, complete sequence Length = 146549 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 841 aggaagatgaaggaacatgct 861 ||||||||||||||||||||| Sbjct: 18341 aggaagatgaaggaacatgct 18361
>dbj|AK052781.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730001H10 product:hypothetical Amine oxidase containing protein, full insert sequence Length = 1901 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 741 tggctggaaggtgatgaggcg 761 ||||||||||||||||||||| Sbjct: 1002 tggctggaaggtgatgaggcg 982
>ref|NM_145118.1| Danio rerio suppressor of Ty 6 homolog (S. cerevisiae) (supt6h), mRNA gb|AF421378.1| Danio rerio Spt6 (spt6) mRNA, complete cds Length = 6340 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 826 gagatgatggagaggaggaagatga 850 ||||||||| ||||||||||||||| Sbjct: 574 gagatgatgaagaggaggaagatga 598
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1418 ccggcccgaggatttgccttggcaaggac 1446 |||| |||||||||||||| ||||||||| Sbjct: 27082233 ccgggccgaggatttgcctcggcaaggac 27082205
>emb|AL591963.9| Human DNA sequence from clone RP13-454D13 on chromosome 13, complete sequence Length = 67697 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 aacccaaagcacaagcatctcccca 32 ||||||||||||| ||||||||||| Sbjct: 20660 aacccaaagcacaggcatctcccca 20684
>emb|AL162504.12| Human DNA sequence from clone RP11-199O14 on chromosome 20 Contains part of a novel gene, complete sequence Length = 105757 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1290 ccactccatggggagaatgga 1310 ||||||||||||||||||||| Sbjct: 81240 ccactccatggggagaatgga 81260
>emb|AL078590.28|HSA557H15 Human DNA sequence from clone RP11-557H15 on chromosome 6q23.1-23.3 Contains three novel genes, the 3' part of a novel gene and a member A1 of family with sequence similarity 8 (FAM8A1) pseudogene, complete sequence Length = 195021 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gggcataaacccaaagcacaa 21 ||||||||||||||||||||| Sbjct: 132302 gggcataaacccaaagcacaa 132282
>emb|AL008728.1|HS125N5 Human DNA sequence from clone RP1-125N5 on chromosome 6q26-27 Contains the 3' end of a variant of the gene for smooth muscle cell associated protein 2 (SMAP2) or secreted modular calcium binding protein 2 (SMOC2), a novel gene and a CpG island, complete sequence Length = 84126 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 |||||||| |||||||||||||||| Sbjct: 44650 gatgatggggaggaggaagatgaag 44674
>emb|X95346.1|MMPLCGAM1 M.musculus mRNA for phospholipase C gamma 1 Length = 621 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 287 agatgatggagaggaggaaga 307
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 1564716 gatgatgaagaggaggaagatgaag 1564740
>gb|AC011454.6|AC011454 Homo sapiens chromosome 19 clone CTC-347E6, complete sequence Length = 163120 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 830 tgatggagaggaggaagatga 850 ||||||||||||||||||||| Sbjct: 129600 tgatggagaggaggaagatga 129620
>gb|AC092686.3| Homo sapiens BAC clone RP11-767C16 from 2, complete sequence Length = 117755 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 tttcttatttgtatcttgtgt 1634 ||||||||||||||||||||| Sbjct: 45857 tttcttatttgtatcttgtgt 45877
>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete sequence Length = 117296 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 855 acatgctgctgctggtgacga 875 ||||||||||||||||||||| Sbjct: 73739 acatgctgctgctggtgacga 73759
>gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate Md5, complete genome Length = 177874 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 147549 gatgatgaagaggaggaagatgaag 147573 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 170895 gatgatgaagaggaggaagatgaag 170871
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1418 ccggcccgaggatttgccttggcaaggac 1446 |||| |||||||||||||| ||||||||| Sbjct: 135435 ccgggccgaggatttgcctcggcaaggac 135407
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1418 ccggcccgaggatttgccttggcaaggac 1446 |||| |||||||||||||| ||||||||| Sbjct: 53882 ccgggccgaggatttgcctcggcaaggac 53854
>gb|AC019330.3| Homo sapiens BAC clone RP11-81N16 from 2, complete sequence Length = 167777 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 gtgctcccttcccttgtcgccaacc 211 |||||||||||||||||| |||||| Sbjct: 156910 gtgctcccttcccttgtccccaacc 156934
>ref|XM_957991.1| Neurospora crassa OR74A hypothetical protein (NCU06233.1) partial mRNA Length = 2325 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 cggcgtcgacccgggcctcct 653 ||||||||||||||||||||| Sbjct: 1053 cggcgtcgacccgggcctcct 1073
>gb|AY902326.1| Mus musculus strain CAST/EiJ Plcg1 (Plcg1) gene, complete cds Length = 3658 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2554 agatgatggagaggaggaaga 2574
>ref|XM_571655.1| Cryptococcus neoformans var. neoformans JEC21 rtf1 protein (CNF03680) partial mRNA Length = 1682 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagat 848 ||||||||||||||||||||| Sbjct: 141 gatgatggagaggaggaagat 161
>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full insert sequence Length = 2118 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1418 ccggcccgaggatttgccttggcaaggac 1446 |||| |||||||||||||| ||||||||| Sbjct: 1495 ccgggccgaggatttgcctcggcaaggac 1523
>dbj|AP006407.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT23O19, TM0297a, complete sequence Length = 61781 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 832 atggagaggaggaagatgaag 852 ||||||||||||||||||||| Sbjct: 48704 atggagaggaggaagatgaag 48684
>gb|U17705.1|GHU17705 Gallid herpesvirus 1 internal short repeat region, IPC4 gene, partial cds Length = 13045 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 6543 gatgatgaagaggaggaagatgaag 6567
>gb|U17701.1|GHU17701 Gallid herpesvirus 1 latency associated transcript from the internal short repeat region, IPC4 antisense RNA, clone AE14 Length = 1628 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 856 gatgatgaagaggaggaagatgaag 880
>gb|U17700.1|GHU17700 Gallid herpesvirus 1 latency associated transcript from the internal short repeat region, IPC4 antisense RNA, clone AE12 Length = 2310 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 1686 gatgatgaagaggaggaagatgaag 1710
>gb|AC002368.1|AC002368 Homo sapiens Xq28 BAC PAC and cosmid clones containing FMR2 gene exons 1,2, and 3, complete sequence Length = 324816 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 840 gaggaagatgaaggaacatgc 860 ||||||||||||||||||||| Sbjct: 34369 gaggaagatgaaggaacatgc 34349
>gb|AC150276.2| Mus musculus BAC clone RP23-177G19 from 19, complete sequence Length = 221528 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1611 ccttttcttatttgtatcttgtgtg 1635 |||||||||||||||||||| |||| Sbjct: 103945 ccttttcttatttgtatcttctgtg 103969
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence Length = 207901 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 29381 agatgatggagaggaggaaga 29401
>emb|AL606922.5| Mouse DNA sequence from clone RP23-149E24 on chromosome 4, complete sequence Length = 191957 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 741 tggctggaaggtgatgaggcg 761 ||||||||||||||||||||| Sbjct: 183365 tggctggaaggtgatgaggcg 183345
>gb|L41561.1|MDVFRA Gallid herpesvirus mRNA fragment Length = 1568 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 55 gatgatgaagaggaggaagatgaag 79
>gb|L29643.1|HSMANTI Gallid herpesvirus antisense RNA Length = 2741 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 383 gatgatgaagaggaggaagatgaag 407
>gb|M75729.1|HSMICP4A Marek's disease virus 175 kDa protein (ICP4) gene (required for the switch from immediate-early to early mode of gene expression), complete cds Length = 5798 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 gatgatggagaggaggaagatgaag 852 ||||||| ||||||||||||||||| Sbjct: 1766 gatgatgaagaggaggaagatgaag 1742
>ref|NM_013187.1| Rattus norvegicus phospholipase C, gamma 1 (Plcg1), mRNA gb|J03806.1|RATPPLCA Rat phospholipase C mRNA, complete cds Length = 5106 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 827 agatgatggagaggaggaaga 847 ||||||||||||||||||||| Sbjct: 2916 agatgatggagaggaggaaga 2936
>dbj|AB034801.2| Mus musculus mLAO mRNA for L-amino acid oxidase, complete cds Length = 1951 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 741 tggctggaaggtgatgaggcg 761 ||||||||||||||||||||| Sbjct: 1031 tggctggaaggtgatgaggcg 1011 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 271,011,604 Number of extensions: 14523486 Number of successful extensions: 296749 Number of sequences better than 10.0: 101 Number of HSP's gapped: 296732 Number of HSP's successfully gapped: 161 Length of query: 1758 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1735 Effective length of database: 18,503,978,556 Effective search space: 32104402794660 Effective search space used: 32104402794660 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
