ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf12o13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P32689:YJBH_ECOLI Uncharacterized lipoprotein yjbH precursor - E... 36 0.36
2Q9HBX9:RXFP1_HUMAN Relaxin receptor 1 - Homo sapiens (Human) 32 4.0
3Q8R149:BUD13_MOUSE BUD13 homolog - Mus musculus (Mouse) 32 6.8

>P32689:YJBH_ECOLI Uncharacterized lipoprotein yjbH precursor - Escherichia coli|
          Length = 698
 Score = 35.8 bits (81), Expect = 0.36
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
 Frame = -3

Query: 867 RYCHHDASYQETGAAD---CRHSPNLIKLLFSPL*FNGETSQQDKQPPTIYCETKKGHSG 697
           +YC+ D SY++ G+ D     H P  +        F G   Q   QP  +  E    + G
Sbjct: 177 KYCYRDNSYKQAGSIDGSQMFHGPASL--------FGGVEYQTPWQPLRLKLE----YEG 224

Query: 696 DRYDEDFADQLNQR----IVVYSKVHPNTDLNCIYDTINGYVY 580
           + Y +DFA +L Q+    +    +V    D+N  Y+  N +++
Sbjct: 225 NNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMF 267



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>Q9HBX9:RXFP1_HUMAN Relaxin receptor 1 - Homo sapiens (Human)|
          Length = 757

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +1

Query: 649 DNPLVELVSKIFIVSVSAVALLGFAVYGGRLFVLLRRFPIESKGRKKKLYEVGTVTTICC 828
           +N L  ++ ++F+  VSAV         G +FV+  R  I S   + KLY + ++ ++CC
Sbjct: 400 ENLLASIIQRVFVWVVSAVTCF------GNIFVICMRPYIRS---ENKLYAM-SIISLCC 449

Query: 829 TCFLIRCIVVAISAFD 876
              L+   +  I  FD
Sbjct: 450 ADCLMGIYLFVIGGFD 465



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>Q8R149:BUD13_MOUSE BUD13 homolog - Mus musculus (Mouse)|
          Length = 637

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 22/70 (31%), Positives = 30/70 (42%)
 Frame = -2

Query: 940 LSTYNRRNLELDDPKPPKKHQHQMQILPPRCILSGNRCSRLSSQSQPHKASFFAPLIQWG 761
           LS   R   +  DP PP++ +H +   PPR     +R S   S  + H  S        G
Sbjct: 212 LSPPRRVRHDTPDPSPPRRVRHDLDASPPR---KSHRNSSAVSPRRGHHGSL-------G 261

Query: 760 NVSARQTASH 731
             S RQT +H
Sbjct: 262 TSSPRQTHNH 271


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 184,334,109
Number of extensions: 3751625
Number of successful extensions: 9396
Number of sequences better than 10.0: 3
Number of HSP's gapped: 9394
Number of HSP's successfully gapped: 3
Length of query: 396
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 281
Effective length of database: 69,142,514
Effective search space: 19429046434
Effective search space used: 19429046434
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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