ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf21a08 |
|---|---|
| Clone Library Name | barley_pub |
>AK102815:Os02g0520800 | Length = 272 Score = 434 bits (1116), Expect = e-122 Identities = 214/273 (78%), Positives = 237/273 (86%), Gaps = 3/273 (1%) Frame = +2 Query: 137 MLRVAGRRISSHLAWRPXXXXXXGRTPLVGG-LPGED-FPWD-QNPRFAIESPFYVAARG 307 MLRVAGRR+++ LAWRP R PL GG LPG+D F + Q PRFA++SPF+ A+RG Sbjct: 1 MLRVAGRRLTTALAWRPAAAAG-ARGPLAGGSLPGDDEFSREPQRPRFAVDSPFFAASRG 59 Query: 308 FSAESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGG 487 FS+E+LVPR+QDV L ELPAT +A+KNP AKIVYDEYNH+RY PGDPSKRAFAYFVLSGG Sbjct: 60 FSSETLVPRNQDVSLTELPATVSAVKNPSAKIVYDEYNHERYQPGDPSKRAFAYFVLSGG 119 Query: 488 RFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE 667 RF+YAS SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE Sbjct: 120 RFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE 179 Query: 668 DDVKLANSVDVASLRDPQEDAVRVKNPEWLVVIGVCTHLGCIPLPNSGDFGGWFCPCHGS 847 +D+ LANSVD+ SLRDPQ+DA RVKNPEWLVVIGVCTHLGCIPLPN+GDFGGWFCPCHGS Sbjct: 180 EDINLANSVDIGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGS 239 Query: 848 HYDISGRIRKGPAPYNLEVPTYSFLEDNKMLIG 946 HYDISGRIRKGPAPYNLEVPTYSFLE+NK+LIG Sbjct: 240 HYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272
>AK059519:Os04g0398500 | Length = 278 Score = 420 bits (1080), Expect = e-118 Identities = 212/278 (76%), Positives = 231/278 (83%), Gaps = 8/278 (2%) Frame = +2 Query: 137 MLRVAGRRISSHLAWRPXXXXXXGRT-PLVGGLPGEDFPWDQN------PRFAIESPFYV 295 MLRVAGRR+SS L+WRP P G L G++ D N PRF+IESPF+ Sbjct: 1 MLRVAGRRLSSSLSWRPAATAAAAAGGPRGGPLAGKNDDDDNNGNGRVQPRFSIESPFFA 60 Query: 296 AARGFSA-ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYF 472 AARGFS+ E+LVPR+QD GLAELPAT AALKNP K+VYDEYNH+R+ PGDPSKRAFAYF Sbjct: 61 AARGFSSSETLVPRNQDTGLAELPATVAALKNPNPKVVYDEYNHERHAPGDPSKRAFAYF 120 Query: 473 VLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFI 652 VLSGGRF+YAS SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFI Sbjct: 121 VLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFI 180 Query: 653 RRRTEDDVKLANSVDVASLRDPQEDAVRVKNPEWLVVIGVCTHLGCIPLPNSGDFGGWFC 832 RRRTEDD+ LANSVDV SLR PQ+DA RVKNPEWLVVIGVCTHLGCIPLPN+GDFGGWFC Sbjct: 181 RRRTEDDIALANSVDVGSLRHPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC 240 Query: 833 PCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKMLIG 946 PCHGSHYDISGRIRKGPAP+NLEVPTYSFLE+NK+LIG Sbjct: 241 PCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLIG 278
>D21116:Os04g0398500 | Length = 99 Score = 174 bits (441), Expect = 1e-43 Identities = 85/92 (92%), Positives = 88/92 (95%) Frame = +2 Query: 539 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDVKLANSVDVASLRDP 718 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDD+ LANSVDV SLR P Sbjct: 8 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIALANSVDVGSLRHP 67 Query: 719 QEDAVRVKNPEWLVVIGVCTHLGCIPLPNSGD 814 Q+DA RVKNPEWLVVIGVCTHLGCIPLPN+GD Sbjct: 68 QQDAERVKNPEWLVVIGVCTHLGCIPLPNAGD 99
>AK071634:Os07g0556200 | Length = 225 Score = 55.1 bits (131), Expect = 9e-08 Identities = 25/57 (43%), Positives = 39/57 (68%) Frame = +2 Query: 770 VCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKML 940 VCTHLGC+ N+ + + CPCHGS Y+ GR+ +GPAP +L + ++ ++D K+L Sbjct: 153 VCTHLGCVVPWNAAE-NKFICPCHGSQYNNQGRVVRGPAPLSLAL-VHADVDDGKVL 207
>AF093631:Os07g0556200 | Length = 225 Score = 55.1 bits (131), Expect = 9e-08 Identities = 25/57 (43%), Positives = 39/57 (68%) Frame = +2 Query: 770 VCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKML 940 VCTHLGC+ N+ + + CPCHGS Y+ GR+ +GPAP +L + ++ ++D K+L Sbjct: 153 VCTHLGCVVPWNAAE-NKFICPCHGSQYNNQGRVVRGPAPLSLAL-VHADVDDGKVL 207
>AK111123:Os04g0398400 | Length = 80 Score = 33.9 bits (76), Expect = 0.22 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 Query: 186 GRHARWEDMRRPATLSIVAVGVAASPRSFALRLSGGSGGRV 64 GRH R ++ PATLSIVA ++S + + SGG G V Sbjct: 38 GRHERDDESLLPATLSIVAAAASSSSSASSYSSSGGLGNLV 78
>Os07g0525000:Os07g0525000 | Length = 1532 Score = 32.3 bits (72), Expect = 0.64 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +2 Query: 59 HQTRPPDPPDSRRANERGEAATPTAT 136 H PP P RRAN R +AATP T Sbjct: 147 HNATPPPPSPRRRANRRPDAATPPLT 172
>Os02g0164200:Os02g0164200 | Length = 140 Score = 31.2 bits (69), Expect = 1.4 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +1 Query: 7 PTVRPFVRSRRFGESISPPNPTTRSPGQPESERARRSGDAY 129 P+ RP RSRR G SP PT P +P R RRS ++ Sbjct: 15 PSPRPHARSRRVGPPRSP--PTRPMPCRPPPYRRRRSSASW 53
>AK104081:Os08g0112500 | Length = 303 Score = 31.2 bits (69), Expect = 1.4 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Frame = -1 Query: 539 SGQTLGRANATTRHTQISHRST-QSRQRHACWGHQVG------TSCGYTRRRQFW--HRD 387 S TLGR++ T ++ Q + S + + G Q G ++ G + RRQ+ HR Sbjct: 133 SSSTLGRSSGTDQNAQRFYTSQIAAAEMSTATGGQRGNATKLSSNLGESARRQYLREHRS 192 Query: 386 SSEQPQLLGAQPTLHPGSSEQ 324 SS QL A+P+ P + Q Sbjct: 193 SSRYSQLAAAEPSDRPEWTHQ 213
>AK072696:Os08g0112500 | Length = 748 Score = 31.2 bits (69), Expect = 1.4 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Frame = -1 Query: 539 SGQTLGRANATTRHTQISHRST-QSRQRHACWGHQVG------TSCGYTRRRQFW--HRD 387 S TLGR++ T ++ Q + S + + G Q G ++ G + RRQ+ HR Sbjct: 578 SSSTLGRSSGTDQNAQRFYTSQIAAAEMSTATGGQRGNATKLSSNLGESARRQYLREHRS 637 Query: 386 SSEQPQLLGAQPTLHPGSSEQ 324 SS QL A+P+ P + Q Sbjct: 638 SSRYSQLAAAEPSDRPEWTHQ 658
>Os08g0373400:Os08g0373400 | Length = 966 Score = 30.0 bits (66), Expect = 3.2 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 Query: 684 PIVLMLHLSVIHRRMRCVSRTLSGLLSLVSALTWAAFPC 800 P++L HL V+ R + +G SLV L W+ PC Sbjct: 799 PVLLQFHLWVVPLRKEKIVIKETGFRSLVLFLLWSGLPC 837
>AK106287:Os02g0108100 | Length = 390 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +3 Query: 810 GTSVAGSAHVMAHTTTSQVESGRDQHPTTWRSRP-TVSWR 926 GT +G+A T+ S SGR Q WR R T SWR Sbjct: 299 GTDRSGAATSSPATSRSVTRSGRRQRGRRWRGREGTTSWR 338
>Os10g0164800:Os10g0164800 | Length = 1059 Score = 29.6 bits (65), Expect = 4.2 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 Query: 71 PPDPPDSRRANERGEAATPTAT 136 PP P RRAN R +AATP T Sbjct: 2 PPPPSPRRRANRRPDAATPPLT 23
>AB021310:Os10g0567400 | Length = 352 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V+ C H C S + G CP HG Y G+ K P+ L V Sbjct: 68 VMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNV 115
>AK107247: | Length = 418 Score = 29.6 bits (65), Expect = 4.2 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -3 Query: 1086 YNPVLVRVQHYDNNPSKDYPSNKKVNYQTDTNDS 985 YNP V YDN+ S+ +N N T+DS Sbjct: 232 YNPTYVYNNSYDNSKSESVTNNNTTNIDQSTHDS 265
>AK109254:Os09g0463800 | Length = 156 Score = 29.6 bits (65), Expect = 4.2 Identities = 41/138 (29%), Positives = 48/138 (34%), Gaps = 9/138 (6%) Frame = +2 Query: 8 LQYVLSFVLVVSVNRSRHQTRPPDPP----DSRRANERGE-----AATPTATMLRVAGRR 160 L LS LVV R R + R P PP RR G AA P+ +R GRR Sbjct: 21 LSLSLSLSLVVPAQRKRQRRRWPRPPLRQIQRRRRAPHGRRRPAVAAVPSPPRIRREGRR 80 Query: 161 ISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSAESLVPRSQ 340 W P TP G G P +E+ V +R + R Q Sbjct: 81 ---RAPWPP------AGTP-TSGAAGSRLPDPARGEHVVEA---VGSRRAPTPAAAWRRQ 127 Query: 341 DVGLAELPATAAALKNPC 394 L A AAA PC Sbjct: 128 ---LRRTSAAAAAAPCPC 142
>AK071899:Os10g0567400 | Length = 541 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V+ C H C S + G CP HG Y G+ K P+ L V Sbjct: 257 VMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNV 304
>AK067730:Os10g0567400 | Length = 526 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V+ C H C S + G CP HG Y G+ K P+ L V Sbjct: 242 VMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNV 289
>AK065124:Os10g0567400 | Length = 541 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V+ C H C S + G CP HG Y G+ K P+ L V Sbjct: 257 VMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNV 304
>AK062219:Os10g0567400 | Length = 329 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V+ C H C S + G CP HG Y G+ K P+ L V Sbjct: 45 VMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNV 92
>AF284781:Os10g0567400 | Length = 541 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V+ C H C S + G CP HG Y G+ K P+ L V Sbjct: 257 VMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNV 304
>AK106151:Os01g0550300 | Length = 352 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 435 GYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 337 G L+LY+ T G F AA+ G++ +PT+W Sbjct: 255 GLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAW 287
>AK067529:Os01g0550300 | Length = 352 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 435 GYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 337 G L+LY+ T G F AA+ G++ +PT+W Sbjct: 255 GLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAW 287
>AK061870:Os01g0550300 | Length = 328 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 435 GYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 337 G L+LY+ T G F AA+ G++ +PT+W Sbjct: 231 GLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAW 263
>AK110367: | Length = 113 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -1 Query: 974 RIHPTVSALSR*AFCYPPRNCRSGPPGCRVLVPS*FYLRCRS 849 R HP+ L R C PP R P V +P LRCR+ Sbjct: 66 RRHPSPRPLRRTKSCVPPNVLRQNIPPLSVPLPLSMALRCRT 107
>AK065975:Os05g0498700 | Length = 314 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 435 GYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 337 G L+LY+ T G F A++ GS+ +PT+W Sbjct: 218 GLPLFLYNYTTHQLHGVFEASSFGGSNIDPTAW 250
>Os03g0166300:Os03g0166300 | Length = 380 Score = 28.5 bits (62), Expect = 9.3 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +2 Query: 53 SRHQTRPPDPPDSRRANERGEAATPTATMLRVAGR 157 S H +PP P RR+ AA P A R AGR Sbjct: 298 SGHPPQPPPPRGPRRSRVAPRAAAPAAHRRRRAGR 332
>AK110079: | Length = 1298 Score = 28.5 bits (62), Expect = 9.3 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 10/87 (11%) Frame = +2 Query: 677 KLANSVDVASLRDPQEDAVRVKNPEW--LVVIGVCT---HLGCIPLPNSG---DFGGWFC 832 + A+ AS P + +R + W +V C+ H+ C+ P G + W C Sbjct: 762 RAASEAGSASAATPADHTIR-EGTGWRRIVSCDFCSLHWHIDCVDPPMLGMPSNLRKWMC 820 Query: 833 PCHGSHYDISGRIRK--GPAPYNLEVP 907 P H H R+ + P L++P Sbjct: 821 PAHSDHVGERRRVARIGAAVPKTLDLP 847
>AK107909:Os04g0299500 | Length = 99 Score = 28.5 bits (62), Expect = 9.3 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 Query: 751 VACCHWCLHSPGLHSPAQ 804 V C W +H+P +HSP Q Sbjct: 5 VQACVWAMHAPAVHSPPQ 22
>AK101543:Os08g0104300 | Length = 495 Score = 28.5 bits (62), Expect = 9.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +1 Query: 49 SISPPNPTTRSPGQPESERARRSGDAYRNYAQGRRSTH 162 ++SPP P R P + RA A RNY R T+ Sbjct: 352 AVSPPRPIRRHPSSQSTSRAYSISSAPRNYNLQRYYTN 389
>AK066589:Os08g0104300 | Length = 345 Score = 28.5 bits (62), Expect = 9.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +1 Query: 49 SISPPNPTTRSPGQPESERARRSGDAYRNYAQGRRSTH 162 ++SPP P R P + RA A RNY R T+ Sbjct: 202 AVSPPRPIRRHPSSQSTSRAYSISSAPRNYNLQRYYTN 239
>AK063367:Os10g0567100 | Length = 542 Score = 28.5 bits (62), Expect = 9.3 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = +2 Query: 761 VIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 904 V C H C S G CP HG Y G+ K PA L V Sbjct: 258 VQNTCAHRACPLHLGSVSEGRIQCPFHGWEYSTDGKCEKMPATKLLNV 305 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,282,728 Number of extensions: 921944 Number of successful extensions: 3446 Number of sequences better than 10.0: 32 Number of HSP's gapped: 3434 Number of HSP's successfully gapped: 32 Length of query: 381 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 279 Effective length of database: 11,315,673 Effective search space: 3157072767 Effective search space used: 3157072767 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
