| Clone Name | FLbaf20p06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100431:Os03g0243900 | 31 | 1.4 | 2 | Os06g0638000:Os06g0638000 | 27 | 2.7 | 3 | Os08g0190300:Os08g0190300 | 25 | 3.7 | 4 | Os08g0518300:Os08g0518300 | 28 | 8.8 |
|---|
>AK100431:Os03g0243900 | Length = 336 Score = 31.2 bits (69), Expect = 1.4 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = -1 Query: 1017 PTAAIESPANTGWRKGRGTTRDGSGQDGTGQSV 919 P AA PA TGW GR R G QDGTG+ V Sbjct: 58 PGAARAVPAPTGW-SGRLWARTGCTQDGTGKVV 89
>Os06g0638000:Os06g0638000 | Length = 2068 Score = 26.6 bits (57), Expect(2) = 2.7 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +3 Query: 732 HQRPWPDDASHPTHVGLTPSQHKIKPKLSTYHHHNHNR 845 HQ PD H H H P++ +HHH+H + Sbjct: 55 HQYHLPDHHHHHHH-------HHPPPRVQHHHHHHHQQ 85 Score = 21.9 bits (45), Expect(2) = 2.7 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%) Frame = +2 Query: 908 LPQPTLCPVPSCPLPS-RVVPLP 973 LP PT P P PLP R+ P P Sbjct: 86 LPAPTPPPPPPPPLPQHRLEPPP 108
>Os08g0190300:Os08g0190300 | Length = 1031 Score = 25.0 bits (53), Expect(2) = 3.7 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = +3 Query: 741 PWPDDASHPTHVGLTPSQHKIKPKLSTYHHHNHNRSQPQM 860 PW T TP P L +HHH+H+ P + Sbjct: 854 PWNPPPPETTTTPTTP------PPLQGHHHHHHHYLLPNL 887 Score = 23.1 bits (48), Expect(2) = 3.7 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +1 Query: 661 GTVVPWTEPPRET 699 G V PW PP ET Sbjct: 850 GRVAPWNPPPPET 862
>Os08g0518300:Os08g0518300 | Length = 1755 Score = 28.5 bits (62), Expect = 8.8 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -3 Query: 1087 VLYAAVCLRVCMCSLLVAIVLSLPNGSYRVSCEHGMAKG 971 +L V + +C+L + + LP GS+ V+ EH +A G Sbjct: 296 ILIPCVSGEIFVCNLTTSEFVELPRGSHSVALEHRVAFG 334 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,986,684 Number of extensions: 572882 Number of successful extensions: 2156 Number of sequences better than 10.0: 4 Number of HSP's gapped: 2135 Number of HSP's successfully gapped: 6 Length of query: 367 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 265 Effective length of database: 11,315,673 Effective search space: 2998653345 Effective search space used: 2998653345 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)