| Clone Name | FLbaf17o15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059459.1| Oryza sativa (japonica cultivar-group) Os04g0448600 (Os04g0448600) mRNA, complete cds Length = 995 Score = 662 bits (334), Expect = 0.0 Identities = 493/546 (90%) Strand = Plus / Plus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 81 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 140 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 200 Query: 214 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccgggtc 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 201 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccggcgc 260 Query: 274 cacatgctggggagttgcttacaaaatttcaagggagcaagataagcagacagccctgga 333 |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 261 cacatgctggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctgga 320 Query: 334 gtatctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtatacaga 393 | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || Sbjct: 321 gcatctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtatatgga 380 Query: 394 ttcttcccccaaaataccggaagtccaaaatatgatggtatatttagccaccacaaataa 453 || || || |||| ||| | ||| ||||| |||||||||| |||||||| ||||| || Sbjct: 381 ctcctcaccaaaaacaccagccgtcaaaaatgtgatggtatacttagccacaacaaacaa 440 Query: 454 ggaggccaaccaaaactatctgggtcctgctccgctggaagaaatggccaagcaaatcta 513 | || |||||||||||| || |||||||| |||||||||||||||||||||||||| || Sbjct: 441 gcagagcaaccaaaactaccttggtcctgcaccgctggaagaaatggccaagcaaattta 500 Query: 514 cctagccgaaggcccaactggacctaataaggagtatctgttcaaacttgaggatgcgtt 573 |||||| ||||||||| |||||||||| || ||||| |||||||||||||||||||| || Sbjct: 501 cctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttgaggatgcatt 560 Query: 574 aaacaaaataggtgttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagta 633 ||||||||||| ||||| |||| |||||| |||||| |||||| ||||||||||||||| Sbjct: 561 gaacaaaataggagttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagta 620 Query: 634 tgcaga 639 | |||| Sbjct: 621 tccaga 626
>dbj|AK104134.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E04, full insert sequence Length = 951 Score = 662 bits (334), Expect = 0.0 Identities = 493/546 (90%) Strand = Plus / Plus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 37 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 96 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 156 Query: 214 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccgggtc 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 157 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccggcgc 216 Query: 274 cacatgctggggagttgcttacaaaatttcaagggagcaagataagcagacagccctgga 333 |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 217 cacatgctggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctgga 276 Query: 334 gtatctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtatacaga 393 | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || Sbjct: 277 gcatctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtatatgga 336 Query: 394 ttcttcccccaaaataccggaagtccaaaatatgatggtatatttagccaccacaaataa 453 || || || |||| ||| | ||| ||||| |||||||||| |||||||| ||||| || Sbjct: 337 ctcctcaccaaaaacaccagccgtcaaaaatgtgatggtatacttagccacaacaaacaa 396 Query: 454 ggaggccaaccaaaactatctgggtcctgctccgctggaagaaatggccaagcaaatcta 513 | || |||||||||||| || |||||||| |||||||||||||||||||||||||| || Sbjct: 397 gcagagcaaccaaaactaccttggtcctgcaccgctggaagaaatggccaagcaaattta 456 Query: 514 cctagccgaaggcccaactggacctaataaggagtatctgttcaaacttgaggatgcgtt 573 |||||| ||||||||| |||||||||| || ||||| |||||||||||||||||||| || Sbjct: 457 cctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttgaggatgcatt 516 Query: 574 aaacaaaataggtgttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagta 633 ||||||||||| ||||| |||| |||||| |||||| |||||| ||||||||||||||| Sbjct: 517 gaacaaaataggagttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagta 576 Query: 634 tgcaga 639 | |||| Sbjct: 577 tccaga 582
>dbj|AK068709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159G01, full insert sequence Length = 995 Score = 662 bits (334), Expect = 0.0 Identities = 493/546 (90%) Strand = Plus / Plus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 81 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 140 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 200 Query: 214 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccgggtc 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 201 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccggcgc 260 Query: 274 cacatgctggggagttgcttacaaaatttcaagggagcaagataagcagacagccctgga 333 |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 261 cacatgctggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctgga 320 Query: 334 gtatctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtatacaga 393 | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || Sbjct: 321 gcatctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtatatgga 380 Query: 394 ttcttcccccaaaataccggaagtccaaaatatgatggtatatttagccaccacaaataa 453 || || || |||| ||| | ||| ||||| |||||||||| |||||||| ||||| || Sbjct: 381 ctcctcaccaaaaacaccagccgtcaaaaatgtgatggtatacttagccacaacaaacaa 440 Query: 454 ggaggccaaccaaaactatctgggtcctgctccgctggaagaaatggccaagcaaatcta 513 | || |||||||||||| || |||||||| |||||||||||||||||||||||||| || Sbjct: 441 gcagagcaaccaaaactaccttggtcctgcaccgctggaagaaatggccaagcaaattta 500 Query: 514 cctagccgaaggcccaactggacctaataaggagtatctgttcaaacttgaggatgcgtt 573 |||||| ||||||||| |||||||||| || ||||| |||||||||||||||||||| || Sbjct: 501 cctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttgaggatgcatt 560 Query: 574 aaacaaaataggtgttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagta 633 ||||||||||| ||||| |||| |||||| |||||| |||||| ||||||||||||||| Sbjct: 561 gaacaaaataggagttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagta 620 Query: 634 tgcaga 639 | |||| Sbjct: 621 tccaga 626
>gb|AY108963.1| Zea mays PCO111665 mRNA sequence Length = 906 Score = 464 bits (234), Expect = e-127 Identities = 434/500 (86%), Gaps = 3/500 (0%) Strand = Plus / Plus Query: 104 tgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacgacgcccgcctc 163 ||||||||||| |||||||| ||| | |||||||| || || |||||||||| |||| || Sbjct: 198 tgggtgttcgggtacggctcgctgatctggaacccaggcttcgcctacgacgaccgcgtc 257 Query: 164 gtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacggaccacaggggc 223 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 258 gtcggctttgtcagggactaccgccgcgtcttctaccaagggagcacggaccacaggggc 317 Query: 224 acgccggagttccccgggaggaccgtcacgctcgagcaccagcccgggtccacatgctgg 283 |||||| |||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct: 318 acgccgcagttccccgggaggaccgtcacgctcgagcaccagcccggagcgacttgctgg 377 Query: 284 ggagttgcttacaaaatttcaagggagcaagataagcagacagccctggagtatctggaa 343 ||||||||||||| ||| || |||| |||||||| ||| ||| |||||||||| ||| Sbjct: 378 ggagttgcttacagaat---aaaggaggaagataaggagatagctttggagtatcttgaa 434 Query: 344 gtaagagagaagcaatatgatgagaaggtttaccttgacttgtatacagattcttccccc 403 || || ||||||||||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 435 gtcagggagaagcaatatgatgagaaggtttaccttgacttgtatactgattcatcgccc 494 Query: 404 aaaataccggaagtccaaaatatgatggtatatttagccaccacaaataaggaggccaac 463 ||| |||| | ||| ||||| |||||||||| || ||||||| || |||||| ||| Sbjct: 495 aaagtaccagctgtcgaaaatgtgatggtatacttcgccaccagtaacaaggagaacaat 554 Query: 464 caaaactatctgggtcctgctccgctggaagaaatggccaagcaaatctacctagccgaa 523 ||||||||||| |||||||| || |||||||||||| ||| |||||| ||||| || || Sbjct: 555 caaaactatcttggtcctgcacctctggaagaaatgaccaggcaaatttaccttgctcaa 614 Query: 524 ggcccaactggacctaataaggagtatctgttcaaacttgaggatgcgttaaacaaaata 583 |||||| |||||||||| || |||||| |||||||||| ||||| |||||| ||||| || Sbjct: 615 ggcccatctggacctaacaaagagtatgtgttcaaactcgaggacgcgttacacaaatta 674 Query: 584 ggtgttgtggatcaacatgt 603 || ||||| || |||||||| Sbjct: 675 ggagttgtagaccaacatgt 694
>emb|CT828740.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040E21, full insert sequence Length = 872 Score = 367 bits (185), Expect = 5e-98 Identities = 227/241 (94%) Strand = Plus / Plus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 113 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 172 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggggagcacgga 232 Query: 214 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccgggtc 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 233 ccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcaccagcccggcgc 292 Query: 274 cacatgctggggagttgcttacaaaatttcaagggagcaagataagcagacagccctgga 333 |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 293 cacatgctggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctgga 352 Query: 334 g 334 | Sbjct: 353 g 353 Score = 301 bits (152), Expect = 3e-78 Identities = 266/304 (87%) Strand = Plus / Plus Query: 336 atctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtatacagatt 395 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || | Sbjct: 368 atctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtatatggact 427 Query: 396 cttcccccaaaataccggaagtccaaaatatgatggtatatttagccaccacaaataagg 455 | || || |||| ||| | ||| ||||| |||||||||| |||||||| ||||| ||| Sbjct: 428 cctcaccaaaaacaccagccgtcaaaaatgtgatggtatacttagccacaacaaacaagc 487 Query: 456 aggccaaccaaaactatctgggtcctgctccgctggaagaaatggccaagcaaatctacc 515 || |||||||||||| || |||||||| |||||||||||||||||||||||||| |||| Sbjct: 488 agagcaaccaaaactaccttggtcctgcaccgctggaagaaatggccaagcaaatttacc 547 Query: 516 tagccgaaggcccaactggacctaataaggagtatctgttcaaacttgaggatgcgttaa 575 |||| ||||||||| |||||||||| || ||||| |||||||||||||||||||| || | Sbjct: 548 tagctgaaggcccatctggacctaacaaagagtacctgttcaaacttgaggatgcattga 607 Query: 576 acaaaataggtgttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagtatg 635 |||||||||| ||||| |||| |||||| |||||| |||||| |||||||||||||||| Sbjct: 608 acaaaataggagttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatc 667 Query: 636 caga 639 |||| Sbjct: 668 caga 671
>emb|CR855179.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0152K17, complete sequence Length = 97679 Score = 157 bits (79), Expect = 9e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 66153 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 66094 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 204 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66093 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 66043 Score = 139 bits (70), Expect = 2e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 203 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65897 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 65838 Query: 263 cagcccgggtccacatgc 280 |||||||| |||||||| Sbjct: 65837 cagcccggcgccacatgc 65820 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 505 gcaaatctacctagccgaaggcccaactggacctaataaggagtatctgttcaaacttga 564 |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 64220 gcaaatttacctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttga 64161 Query: 565 ggatgcgttaaacaaaataggt 586 |||||| || |||||||||||| Sbjct: 64160 ggatgcattgaacaaaataggt 64139 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 336 atctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtata 389 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 64788 atctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtata 64735 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 281 tggggagttgcttacaaaatttcaagggagcaagataagcagacagccctggag 334 ||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 65235 tggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctggag 65182 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 437 ttagccaccacaaataaggaggccaaccaaaactatctgggtcctgctccgctggaagaa 496 |||||||| ||||| ||| || |||||||||||| || |||||||| |||||||||||| Sbjct: 64372 ttagccacaacaaacaagcagagcaaccaaaactaccttggtcctgcaccgctggaagaa 64313 Query: 497 atggccaag 505 ||||||||| Sbjct: 64312 atggccaag 64304 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 587 gttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagtatgcaga 639 ||||| |||| |||||| |||||| |||||| |||||||||||||||| |||| Sbjct: 64060 gttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatccaga 64008
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 157 bits (79), Expect = 9e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 10132 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 10073 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 204 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10072 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 10022 Score = 139 bits (70), Expect = 2e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 203 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9876 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 9817 Query: 263 cagcccgggtccacatgc 280 |||||||| |||||||| Sbjct: 9816 cagcccggcgccacatgc 9799 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 505 gcaaatctacctagccgaaggcccaactggacctaataaggagtatctgttcaaacttga 564 |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 8199 gcaaatttacctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttga 8140 Query: 565 ggatgcgttaaacaaaataggt 586 |||||| || |||||||||||| Sbjct: 8139 ggatgcattgaacaaaataggt 8118 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 336 atctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtata 389 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 8767 atctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtata 8714 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 281 tggggagttgcttacaaaatttcaagggagcaagataagcagacagccctggag 334 ||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 9214 tggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctggag 9161 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 437 ttagccaccacaaataaggaggccaaccaaaactatctgggtcctgctccgctggaagaa 496 |||||||| ||||| ||| || |||||||||||| || |||||||| |||||||||||| Sbjct: 8351 ttagccacaacaaacaagcagagcaaccaaaactaccttggtcctgcaccgctggaagaa 8292 Query: 497 atggccaag 505 ||||||||| Sbjct: 8291 atggccaag 8283 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 587 gttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagtatgcaga 639 ||||| |||| |||||| |||||| |||||| |||||||||||||||| |||| Sbjct: 8039 gttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatccaga 7987
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 157 bits (79), Expect = 9e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 22332501 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 22332442 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 204 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22332441 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 22332391 Score = 139 bits (70), Expect = 2e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 203 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22332245 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 22332186 Query: 263 cagcccgggtccacatgc 280 |||||||| |||||||| Sbjct: 22332185 cagcccggcgccacatgc 22332168 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 505 gcaaatctacctagccgaaggcccaactggacctaataaggagtatctgttcaaacttga 564 |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 22330568 gcaaatttacctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttga 22330509 Query: 565 ggatgcgttaaacaaaataggt 586 |||||| || |||||||||||| Sbjct: 22330508 ggatgcattgaacaaaataggt 22330487 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 336 atctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtata 389 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 22331136 atctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtata 22331083 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 281 tggggagttgcttacaaaatttcaagggagcaagataagcagacagccctggag 334 ||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 22331583 tggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctggag 22331530 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 437 ttagccaccacaaataaggaggccaaccaaaactatctgggtcctgctccgctggaagaa 496 |||||||| ||||| ||| || |||||||||||| || |||||||| |||||||||||| Sbjct: 22330720 ttagccacaacaaacaagcagagcaaccaaaactaccttggtcctgcaccgctggaagaa 22330661 Query: 497 atggccaag 505 ||||||||| Sbjct: 22330660 atggccaag 22330652 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 587 gttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagtatgcaga 639 ||||| |||| |||||| |||||| |||||| |||||||||||||||| |||| Sbjct: 22330408 gttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatccaga 22330356
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 157 bits (79), Expect = 9e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 94 catggtgatgtgggtgttcggctacggctccctggtgtggaaccccgggtttgcctacga 153 ||||| ||||||||||||||| ||||| |||||||| ||||||||||| || || |||| Sbjct: 83405 catggcgatgtgggtgttcgggtacgggtccctggtctggaaccccggcttcgcgcacga 83346 Query: 154 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 204 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83345 cgcccgcctcgtcggcttcgtcagggactaccgccgcgtcttctaccaggg 83295 Score = 139 bits (70), Expect = 2e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 203 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83149 gggagcacggaccacaggggcacgccggagttccccgggaggaccgtcacgctcgagcac 83090 Query: 263 cagcccgggtccacatgc 280 |||||||| |||||||| Sbjct: 83089 cagcccggcgccacatgc 83072 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 505 gcaaatctacctagccgaaggcccaactggacctaataaggagtatctgttcaaacttga 564 |||||| |||||||| ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 81472 gcaaatttacctagctgaaggcccatctggacctaacaaagagtacctgttcaaacttga 81413 Query: 565 ggatgcgttaaacaaaataggt 586 |||||| || |||||||||||| Sbjct: 81412 ggatgcattgaacaaaataggt 81391 Score = 91.7 bits (46), Expect = 5e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 336 atctggaagtaagagagaagcaatatgatgagaaggtttaccttgacttgtata 389 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 82040 atctggaagtaagagagaagcaatatgatgagaagatttaccttgatttgtata 81987 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 281 tggggagttgcttacaaaatttcaagggagcaagataagcagacagccctggag 334 ||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 82487 tggggtgttgcttacaaaatttcaacggaacaagataagcagacagctctggag 82434 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 437 ttagccaccacaaataaggaggccaaccaaaactatctgggtcctgctccgctggaagaa 496 |||||||| ||||| ||| || |||||||||||| || |||||||| |||||||||||| Sbjct: 81624 ttagccacaacaaacaagcagagcaaccaaaactaccttggtcctgcaccgctggaagaa 81565 Query: 497 atggccaag 505 ||||||||| Sbjct: 81564 atggccaag 81556 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 587 gttgtggatcaacatgttcaggatttggcaactgctgtgcgcaagtatgcaga 639 ||||| |||| |||||| |||||| |||||| |||||||||||||||| |||| Sbjct: 81312 gttgttgatccacatgtccaggatctggcaaatgctgtgcgcaagtatccaga 81260
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 104 tgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||||||||||||| | |||||||| Sbjct: 827665 tgggtgttcggctacggctccctgatctggaaccc 827631
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 104 tgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||||||||||||||||| ||| ||||| ||||||| Sbjct: 5429335 tgggtgttcggctacggctcgctgatgtggcaccccgg 5429372
>ref|NM_001031032.1| Gallus gallus ChaC, cation transport regulator homolog 2 (E. coli) (CHAC2), mRNA emb|AJ720918.1| Gallus gallus mRNA for hypothetical protein, clone 29n19 Length = 3085 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 101 atgtgggtgttcggctacggctccct 126 |||||||||||||||||||||||||| Sbjct: 56 atgtgggtgttcggctacggctccct 81
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Minus Query: 867 agaatgtgacaaataaaattgaatt 891 ||||||||||||||||||||||||| Sbjct: 17959839 agaatgtgacaaataaaattgaatt 17959815
>gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, region 36D-, BAC clones BACR01G10 and BACR05I08, complete sequence Length = 294942 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Minus Query: 867 agaatgtgacaaataaaattgaatt 891 ||||||||||||||||||||||||| Sbjct: 159201 agaatgtgacaaataaaattgaatt 159177
>dbj|AK227743.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-32-D21 Length = 1146 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 281 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 324
>emb|CT985724.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 607 Score = 48.1 bits (24), Expect = 0.061 Identities = 33/36 (91%) Strand = Plus / Plus Query: 334 gtatctggaagtaagagagaagcaatatgatgagaa 369 |||||| |||||||| ||||||||||||||| |||| Sbjct: 57 gtatctcgaagtaagggagaagcaatatgatcagaa 92
>emb|CT985391.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 597 Score = 48.1 bits (24), Expect = 0.061 Identities = 33/36 (91%) Strand = Plus / Plus Query: 334 gtatctggaagtaagagagaagcaatatgatgagaa 369 |||||| |||||||| ||||||||||||||| |||| Sbjct: 57 gtatctcgaagtaagggagaagcaatatgatcagaa 92
>emb|CT984609.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 618 Score = 48.1 bits (24), Expect = 0.061 Identities = 33/36 (91%) Strand = Plus / Plus Query: 334 gtatctggaagtaagagagaagcaatatgatgagaa 369 |||||| |||||||| ||||||||||||||| |||| Sbjct: 57 gtatctcgaagtaagggagaagcaatatgatcagaa 92
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 48.1 bits (24), Expect = 0.061 Identities = 36/40 (90%) Strand = Plus / Minus Query: 102 tgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||||||||||||| ||||| ||| |||||| |||||| Sbjct: 1064107 tgtgggtgttcggctatggctcgctgatgtggagccccgg 1064068
>ref|NM_119278.3| Arabidopsis thaliana unknown protein (AT4G31290) mRNA, complete cds Length = 1170 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 281 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 324
>gb|BT006411.1| Arabidopsis thaliana At4g31290 gene, complete cds Length = 684 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 1 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 44
>gb|AY087934.1| Arabidopsis thaliana clone 39740 mRNA, complete sequence Length = 1140 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 281 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 324
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 142715 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 142758
>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project) Length = 93038 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 26613 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 26656
>emb|BX828331.1|CNS0A2WK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1078 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 262 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 305
>emb|BX827849.1|CNS0A31W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1064 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 246 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 289
>emb|BX827075.1|CNS0A35V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 48.1 bits (24), Expect = 0.061 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccc 138 |||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 265 atggtgatgtgggtctttggctatggctctcttgtgtggaaccc 308
>ref|NM_001053346.1| Oryza sativa (japonica cultivar-group) Os02g0465900 (Os02g0465900) mRNA, complete cds Length = 1128 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 221 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 267
>gb|AC151761.1| Ornithorhynchus anatinus chromosome UNK clone OABb-434P24, complete sequence Length = 134595 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 100 gatgtgggtgttcggctacggctccct 126 ||||||||||||||||||||| ||||| Sbjct: 116999 gatgtgggtgttcggctacgggtccct 117025
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 46.1 bits (23), Expect = 0.24 Identities = 32/35 (91%) Strand = Plus / Minus Query: 104 tgggtgttcggctacggctccctggtgtggaaccc 138 ||||| |||||||||||||||||| | |||||||| Sbjct: 896124 tgggtattcggctacggctccctgatctggaaccc 896090
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Minus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 15778760 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 15778714
>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1342_D02 Length = 125460 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Minus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 36700 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 36654
>dbj|AK119187.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G07, full insert sequence Length = 1110 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 216 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 262
>dbj|AK104516.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C03, full insert sequence Length = 1115 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 221 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 267
>dbj|AK104503.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F05, full insert sequence Length = 1110 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 216 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 262
>dbj|AK104351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G09, full insert sequence Length = 1114 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 218 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 264
>dbj|AK104241.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B07, full insert sequence Length = 1112 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 221 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 267
>dbj|AK104223.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E10, full insert sequence Length = 1114 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 221 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 267
>dbj|AK104187.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G08, full insert sequence Length = 1103 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 216 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 262
>dbj|AK071205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085D08, full insert sequence Length = 1130 Score = 46.1 bits (23), Expect = 0.24 Identities = 41/47 (87%) Strand = Plus / Plus Query: 95 atggtgatgtgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||| | ||||| |||||||| ||||||||| | ||||||||||| Sbjct: 223 atggtgctctgggtcttcggctatggctccctgatctggaaccccgg 269
>emb|CU024864.5| M.truncatula DNA sequence from clone MTH2-9F11 on chromosome 3, complete sequence Length = 75871 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 432 tatatttagccaccacaaataa 453 |||||||||||||||||||||| Sbjct: 54824 tatatttagccaccacaaataa 54845
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 0.95 Identities = 25/26 (96%) Strand = Plus / Plus Query: 69 gaggggaggtagacggaggcggcggc 94 ||||||||||||||| |||||||||| Sbjct: 27465352 gaggggaggtagacgcaggcggcggc 27465377
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 44.1 bits (22), Expect = 0.95 Identities = 34/38 (89%) Strand = Plus / Plus Query: 104 tgggtgttcggctacggctccctggtgtggaaccccgg 141 |||||||||||||| ||||| ||| ||||||| ||||| Sbjct: 112429 tgggtgttcggctatggctcgctgatgtggaatcccgg 112466
>dbj|AP004145.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047F09 Length = 79652 Score = 44.1 bits (22), Expect = 0.95 Identities = 25/26 (96%) Strand = Plus / Plus Query: 69 gaggggaggtagacggaggcggcggc 94 ||||||||||||||| |||||||||| Sbjct: 55241 gaggggaggtagacgcaggcggcggc 55266
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.95 Identities = 28/30 (93%) Strand = Plus / Minus Query: 104 tgggtgttcggctacggctccctggtgtgg 133 |||||||||||||||||||| ||| ||||| Sbjct: 1510633 tgggtgttcggctacggctcgctgatgtgg 1510604
>gb|AC193564.4| Rhesus Macaque BAC CH250-322I18 () complete sequence Length = 153361 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 120072 ttcgggtacggctccctggtgtgga 120096
>ref|XM_523053.2| PREDICTED: Pan troglodytes ChaC, cation transport regulator-like 1 (CHAC1), mRNA Length = 1559 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 252 ttcggatacggctccctggtgtgga 276
>gb|AY702027.1| Homo sapiens cation transport protein-like protein mRNA, complete cds Length = 590 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 114 ttcgggtacggctccctggtgtgga 138
>ref|XM_001099347.1| PREDICTED: Macaca mulatta similar to CG10365-PA, isoform A (LOC705007), mRNA Length = 2921 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 724 ttcgggtacggctccctggtgtgga 748
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tacggctccctggtgtggaaccccg 140 |||||||||||| |||||||||||| Sbjct: 1741548 tacggctccctgatgtggaaccccg 1741524
>ref|XM_544628.1| PREDICTED: Canis familiaris similar to CG10365-PA, isoform A (LOC487504), mRNA Length = 669 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 106 ttcgggtacggctccctggtgtgga 130
>gb|AC018923.21| Homo sapiens 12 BAC RP11-559C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152802 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 815 tccttctattttactcacact 835 ||||||||||||||||||||| Sbjct: 31186 tccttctattttactcacact 31166
>gb|AC020661.8| Homo sapiens chromosome 15 clone RP11-540O11 map 15q15, complete sequence Length = 191655 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 88787 ttcgggtacggctccctggtgtgga 88811
>emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 in linkage group 4, complete sequence Length = 153499 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 856 tagaaaaaagtagaatgtgacaaat 880 |||||||||||||||||| |||||| Sbjct: 99594 tagaaaaaagtagaatgtaacaaat 99618
>emb|CR624884.1| full-length cDNA clone CS0DK009YH15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 181 ttcgggtacggctccctggtgtgga 205
>emb|CR620504.1| full-length cDNA clone CS0DK007YK15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1448 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 208 ttcgggtacggctccctggtgtgga 232
>emb|CR617904.1| full-length cDNA clone CS0DL002YP06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1506 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 219 ttcgggtacggctccctggtgtgga 243
>emb|CR608003.1| full-length cDNA clone CS0DC004YI06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1475 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 192 ttcgggtacggctccctggtgtgga 216
>emb|CR604510.1| full-length cDNA clone CS0DC015YP13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 206 ttcgggtacggctccctggtgtgga 230
>emb|CR601069.1| full-length cDNA clone CS0DC010YK07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1418 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 197 ttcgggtacggctccctggtgtgga 221
>emb|CR598799.1| full-length cDNA clone CS0DJ014YE22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1477 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 200 ttcgggtacggctccctggtgtgga 224
>emb|CR598230.1| full-length cDNA clone CS0DC010YH01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1440 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 197 ttcgggtacggctccctggtgtgga 221
>emb|CR597001.1| full-length cDNA clone CS0DK006YC13 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1464 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 192 ttcgggtacggctccctggtgtgga 216
>emb|CR592413.1| full-length cDNA clone CS0DD001YC17 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1478 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 195 ttcgggtacggctccctggtgtgga 219
>emb|CR591065.1| full-length cDNA clone CS0DL004YD17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1450 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 184 ttcgggtacggctccctggtgtgga 208
>gb|BC019625.1| Homo sapiens ChaC, cation transport regulator homolog 1 (E. coli), mRNA (cDNA clone MGC:24988 IMAGE:4473135), complete cds Length = 1523 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 208 ttcgggtacggctccctggtgtgga 232
>ref|NM_024111.2| Homo sapiens ChaC, cation transport regulator homolog 1 (E. coli) (CHAC1), mRNA gb|BC001847.2| Homo sapiens ChaC, cation transport regulator homolog 1 (E. coli), mRNA (cDNA clone MGC:4504 IMAGE:2964714), complete cds Length = 1519 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 197 ttcgggtacggctccctggtgtgga 221
>gb|BC001683.1| Homo sapiens ChaC, cation transport regulator homolog 1 (E. coli), mRNA (cDNA clone MGC:2831 IMAGE:2964714), complete cds Length = 1528 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ttcggctacggctccctggtgtgga 134 ||||| ||||||||||||||||||| Sbjct: 206 ttcgggtacggctccctggtgtgga 230 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 182,228,984 Number of extensions: 9789528 Number of successful extensions: 195966 Number of sequences better than 10.0: 68 Number of HSP's gapped: 195961 Number of HSP's successfully gapped: 93 Length of query: 995 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 972 Effective length of database: 18,503,978,556 Effective search space: 17985867156432 Effective search space used: 17985867156432 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)