ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf17n21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050160.1| Oryza sativa (japonica cultivar-group) Os01g0626100 (Os01g0626100) mRNA, complete cds Length = 2935 Score = 710 bits (358), Expect = 0.0 Identities = 526/582 (90%) Strand = Plus / Plus Query: 24 tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 83 |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| Sbjct: 56 tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 115 Query: 84 ggcaagagcgaggtgtcggatctgaagcagcagctgcggcagctggcggggagccgtgca 143 || |||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 116 gggaagagcgaggtggcggatctgaagcagcagctgcggcagctggcggggagccgcgcg 175 Query: 144 ccagacgctgatgatcagcgccgggatgtcttcaagcgggtgatctcttgcatgaccgca 203 || ||||| || || ||||| |||| |||||||||||||||||||| |||||||| || Sbjct: 176 cccgacgccgacgaccagcggagggacgtcttcaagcgggtgatctcctgcatgacggcc 235 Query: 204 ggtatcgacgtctcggcggcgttcggggagatggtgctctgctccgccacctccgacgtt 263 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 ggcatcgacgtgtcggcggcgttcggggagatggtgctctgctccgccacctccgacgtc 295 Query: 264 gtgctcaagaagatgtgctacctctacgtcggtgtccatgcgcgcgcccatccggacctc 323 ||||| |||||||||||||||||||||||||| ||||| |||||| ||| ||||||||| Sbjct: 296 gtgctgaagaagatgtgctacctctacgtcggcgtccacgcgcgcaaccacccggacctc 355 Query: 324 gccctcctcaccatcaacttcctccagcgcgactgccgcgaccaggaccccaccatccgc 383 || |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 356 gcgctcctcaccatcaacttcctccagcgcgactgccacgaccaggaccccaccatacgc 415 Query: 384 ggccttgctctccgcagcctctgctccctccgcgttccaaaccttgtcgagtaccttgtt 443 ||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 416 ggcctggcactccgcagcctctgctccctccgcgttcccaacctcgtcgagtaccttgtc 475 Query: 444 acgccgctcaccacagggctgaaggaccctagtgcctacgttcggatggtcgctgctgtt 503 |||||||| |||| ||||| |||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 476 tcgccgctcgccactgggctcaaggaccccagtgcttacgtccggatgatcgctgctgtt 535 Query: 504 ggtgctgcaaagctgtatcacatatctgctaccacctgcctcgacgctgacctgcctgct 563 |||||||| |||||||||||||||||||| ||| ||||||| || |||||| ||||||| Sbjct: 536 ggtgctgcgaagctgtatcacatatctgccaccgcctgccttgatgctgacttgcctgcg 595 Query: 564 gcgctcaaggcacttatgctctcggaccctgatgctcaggtg 605 |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 596 gcgctcaaagcgcttatgctctctgatcctgatgcacaggtg 637
>dbj|AK066892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088A19, full insert sequence Length = 2936 Score = 710 bits (358), Expect = 0.0 Identities = 526/582 (90%) Strand = Plus / Plus Query: 24 tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 83 |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| Sbjct: 57 tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 116 Query: 84 ggcaagagcgaggtgtcggatctgaagcagcagctgcggcagctggcggggagccgtgca 143 || |||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 117 gggaagagcgaggtggcggatctgaagcagcagctgcggcagctggcggggagccgcgcg 176 Query: 144 ccagacgctgatgatcagcgccgggatgtcttcaagcgggtgatctcttgcatgaccgca 203 || ||||| || || ||||| |||| |||||||||||||||||||| |||||||| || Sbjct: 177 cccgacgccgacgaccagcggagggacgtcttcaagcgggtgatctcctgcatgacggcc 236 Query: 204 ggtatcgacgtctcggcggcgttcggggagatggtgctctgctccgccacctccgacgtt 263 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggcatcgacgtgtcggcggcgttcggggagatggtgctctgctccgccacctccgacgtc 296 Query: 264 gtgctcaagaagatgtgctacctctacgtcggtgtccatgcgcgcgcccatccggacctc 323 ||||| |||||||||||||||||||||||||| ||||| |||||| ||| ||||||||| Sbjct: 297 gtgctgaagaagatgtgctacctctacgtcggcgtccacgcgcgcaaccacccggacctc 356 Query: 324 gccctcctcaccatcaacttcctccagcgcgactgccgcgaccaggaccccaccatccgc 383 || |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 357 gcgctcctcaccatcaacttcctccagcgcgactgccacgaccaggaccccaccatacgc 416 Query: 384 ggccttgctctccgcagcctctgctccctccgcgttccaaaccttgtcgagtaccttgtt 443 ||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 417 ggcctggcactccgcagcctctgctccctccgcgttcccaacctcgtcgagtaccttgtc 476 Query: 444 acgccgctcaccacagggctgaaggaccctagtgcctacgttcggatggtcgctgctgtt 503 |||||||| |||| ||||| |||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 477 tcgccgctcgccactgggctcaaggaccccagtgcttacgtccggatgatcgctgctgtt 536 Query: 504 ggtgctgcaaagctgtatcacatatctgctaccacctgcctcgacgctgacctgcctgct 563 |||||||| |||||||||||||||||||| ||| ||||||| || |||||| ||||||| Sbjct: 537 ggtgctgcgaagctgtatcacatatctgccaccgcctgccttgatgctgacttgcctgcg 596 Query: 564 gcgctcaaggcacttatgctctcggaccctgatgctcaggtg 605 |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 597 gcgctcaaagcgcttatgctctctgatcctgatgcacaggtg 638
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 632 bits (319), Expect = e-177 Identities = 469/519 (90%) Strand = Plus / Plus Query: 87 aagagcgaggtgtcggatctgaagcagcagctgcggcagctggcggggagccgtgcacca 146 |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 24991077 aagagcgaggtggcggatctgaagcagcagctgcggcagctggcggggagccgcgcgccc 24991136 Query: 147 gacgctgatgatcagcgccgggatgtcttcaagcgggtgatctcttgcatgaccgcaggt 206 ||||| || || ||||| |||| |||||||||||||||||||| |||||||| || || Sbjct: 24991137 gacgccgacgaccagcggagggacgtcttcaagcgggtgatctcctgcatgacggccggc 24991196 Query: 207 atcgacgtctcggcggcgttcggggagatggtgctctgctccgccacctccgacgttgtg 266 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 24991197 atcgacgtgtcggcggcgttcggggagatggtgctctgctccgccacctccgacgtcgtg 24991256 Query: 267 ctcaagaagatgtgctacctctacgtcggtgtccatgcgcgcgcccatccggacctcgcc 326 || |||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||| Sbjct: 24991257 ctgaagaagatgtgctacctctacgtcggcgtccacgcgcgcaaccacccggacctcgcg 24991316 Query: 327 ctcctcaccatcaacttcctccagcgcgactgccgcgaccaggaccccaccatccgcggc 386 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 24991317 ctcctcaccatcaacttcctccagcgcgactgccacgaccaggaccccaccatacgcggc 24991376 Query: 387 cttgctctccgcagcctctgctccctccgcgttccaaaccttgtcgagtaccttgttacg 446 || || ||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 24991377 ctggcactccgcagcctctgctccctccgcgttcccaacctcgtcgagtaccttgtctcg 24991436 Query: 447 ccgctcaccacagggctgaaggaccctagtgcctacgttcggatggtcgctgctgttggt 506 |||||| |||| ||||| |||||||| ||||| ||||| |||||| |||||||||||||| Sbjct: 24991437 ccgctcgccactgggctcaaggaccccagtgcttacgtccggatgatcgctgctgttggt 24991496 Query: 507 gctgcaaagctgtatcacatatctgctaccacctgcctcgacgctgacctgcctgctgcg 566 ||||| |||||||||||||||||||| ||| ||||||| || |||||| ||||||| ||| Sbjct: 24991497 gctgcgaagctgtatcacatatctgccaccgcctgccttgatgctgacttgcctgcggcg 24991556 Query: 567 ctcaaggcacttatgctctcggaccctgatgctcaggtg 605 ||||| || ||||||||||| || |||||||| |||||| Sbjct: 24991557 ctcaaagcgcttatgctctctgatcctgatgcacaggtg 24991595 Score = 291 bits (147), Expect = 8e-75 Identities = 210/231 (90%) Strand = Plus / Plus Query: 925 aggtttatgaacgcataaaggcacctttgcttactctggtaggtgctgggagtccggagc 984 |||||||||| || ||||| ||||| |||||||||| ||||| ||||||||||| || | Sbjct: 24995907 aggtttatgagcgtataaaagcaccactgcttactcttgtaggagctgggagtcctgaac 24995966 Query: 985 aatcatattcagtgctatgtcatctgcatcttttggtgatgcgtgctcccatgttatttt 1044 |||||||||| |||||||| ||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 24995967 aatcatattctgtgctatgccatttgcatcttttggtgatgcgtgctccaatgctatttt 24996026 Query: 1045 cttccgactacaaaagtttctactgccagtttagtgatccttcgtatgtgaagaagctga 1104 | ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 24996027 cctccgactacaaaagtttctactgccagttcagtgatccttcatatgtcaagaagctta 24996086 Query: 1105 aacttgagatgttgactgctatagcaaatgagagcaacacctatgaaattg 1155 ||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 24996087 aacttgagatgctgactgctatagcaaacgagagcaacacctatgaaattg 24996137 Score = 262 bits (132), Expect = 7e-66 Identities = 183/200 (91%) Strand = Plus / Plus Query: 729 atcaaagaattcagtgagtgggcacagtgccatgttcttgagttggcgtcaaagttccta 788 |||||||| |||||||||||||||||||||| ||||| || || | |||||| |||||| Sbjct: 24995415 atcaaagagttcagtgagtgggcacagtgcctcgttctagaattagtgtcaaacttccta 24995474 Query: 789 ccatctgataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcat 848 ||||||||||| || ||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 24995475 ccatctgataacaacgaaatttttgacatcatgaaccttcttgaggacagacttcagcat 24995534 Query: 849 gcaaatggagctgttgttttggcaacaatcaaagtgtttctccacttgacgatgtcaatg 908 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 24995535 gcaaatggagctgttgttttggcaacaatcaaagtttttctccacttgacaatgtcaatg 24995594 Query: 909 accgatgttcaccagcaggt 928 || ||||||||||||||||| Sbjct: 24995595 actgatgttcaccagcaggt 24995614 Score = 262 bits (132), Expect = 7e-66 Identities = 168/180 (93%) Strand = Plus / Plus Query: 1641 caggatgttcatgaccgagcacttttctactacaggcttttacaatatgatccggctgta 1700 |||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 24997433 caggatgttcatgaccgagcacttttctactataggcttttgcagtatgatcctgctgtt 24997492 Query: 1701 gctgagcgtgtagtaaaccctccgaagcaagctgtctctgtatttgcagacacacagagc 1760 ||||| ||||| ||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 24997493 gctgaacgtgttgtaaaccctcccaagcaagctgtctctgtatttgcagatacgcagagc 24997552 Query: 1761 agtgaaatcaaagatcggatatttgatgaatttaacagcctatcagttgtatatcagaag 1820 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 24997553 agtgaaatcaaagatcggatatttgatgaattcaacagcctatcagtggtatatcagaag 24997612 Score = 222 bits (112), Expect = 6e-54 Identities = 187/212 (88%) Strand = Plus / Plus Query: 1323 gtcttggtgaaagatctcttgaggaaatatccccaatggagccatgattgtatagctgtt 1382 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 24996526 gtcttggtgaaagatcttttgaggaaatatcctcaatggagccatgattgtatagcagtt 24996585 Query: 1383 gttggaaatattagtagtcaaaatattcaagagccaaaaggcaaagcagctctcatatgg 1442 |||||||| || ||||| |||||||||| ||||||||||||||||||||||| |||||| Sbjct: 24996586 gttggaaacatcagtagcaaaaatattcaggagccaaaaggcaaagcagctcttatatgg 24996645 Query: 1443 atgttgggtgaatattctcaagatatgcatgatgctccatatgttcttgaaaatatcgtt 1502 ||||| || |||||||| ||||| ||||||||||||||||| ||||||| | | ||||| Sbjct: 24996646 atgttaggagaatattcacaagacatgcatgatgctccatacattcttgagagtctcgtt 24996705 Query: 1503 gtgaactgggatgaggagcagtctcccgaggt 1534 | || ||||| || ||||| ||||| ||||| Sbjct: 24996706 gaaaattgggaggaagagcactctcctgaggt 24996737 Score = 214 bits (108), Expect = 1e-51 Identities = 258/308 (83%) Strand = Plus / Plus Query: 2261 tcaggaatgctctttaagtccacaaggagcagcttctttgatgaatccccaatcgctcat 2320 ||||||||| || |||||||||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 24998672 tcaggaatgttcattaagtccacaaggagcagcatcattgatgaatcctcaatcactcat 24998731 Query: 2321 tcgtcatatgcaaagcaactacattcaatgcattgcttcaggcggtcagcctccaaatta 2380 ||| |||||||||| |||||||||||| || ||||||||||| || ||||| ||||| || Sbjct: 24998732 tcgacatatgcaaaacaactacattcagtgtattgcttcaggtggccagcccccaaacta 24998791 Query: 2381 caagttctacttttatggtcagaaagctggggctgctgccgtctaccttgtagaatgcat 2440 |||||||| || |||| ||| || | ||| ||| | || ||| |||||||||||| || Sbjct: 24998792 caagttctttttctatgctcaaaaggatggtgctaccgctttcttccttgtagaatgtat 24998851 Query: 2441 tgtgaacacagcatcagcgaaggcccagctcaaaattaaggtcgaggatgggactactgc 2500 || |||||||||||||||||||| ||| ||||| | |||| || |||||||| |||| Sbjct: 24998852 cgtcaacacagcatcagcgaaggcacagatcaaagtgaaggctgatgatgggaccgctgc 24998911 Query: 2501 tgacgcattttctactttgtttcaatcagtattgtcccaatttgggcgttcttgattgtg 2560 || |||||||| || |||||||| |||| |||||| ||||||||| |||||||| || Sbjct: 24998912 agaggcattttcaacgttgtttcagtcagctttgtccaaatttgggctttcttgatcctg 24998971 Query: 2561 agcatttt 2568 |||||||| Sbjct: 24998972 agcatttt 24998979 Score = 194 bits (98), Expect = 1e-45 Identities = 152/170 (89%) Strand = Plus / Plus Query: 1155 gtaaccgagctgtgtgaatacgctggaaatgttgatgtaccaattgcaagagagtctatc 1214 ||||| ||| |||||||||| ||||||||||||||||||||||| ||| | |||||||| Sbjct: 24996258 gtaactgagttgtgtgaatatgctggaaatgttgatgtaccaatcgcacgtgagtctatt 24996317 Query: 1215 agagcagttggaaaaatagctctgcagcaatatgatgtgaatgctatcgttgataggctt 1274 |||||||||| |||||||| |||||||| ||||||||||||||||| ||||| |||||| Sbjct: 24996318 cgagcagttgggaaaatagcgctgcagcagtatgatgtgaatgctattgttgacaggctt 24996377 Query: 1275 ctacaatttcttgaaatggacaaggattatgtgactgctgagactcttgt 1324 || ||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 24996378 ctgcaattccttgaaatggacaaggaatatgtgacggctgaaactcttgt 24996427 Score = 133 bits (67), Expect = 4e-27 Identities = 184/223 (82%) Strand = Plus / Plus Query: 2043 ttgctcagttcgcaaacaccagctgaaactgcactaataaatcctggtagttcgacatat 2102 ||||| ||||| |||| ||| |||||||| ||||||||||||||||| | |||||| Sbjct: 24998063 ttgcttagttcacaaataccgtctgaaacttcactaataaatcctggtgcacctacatat 24998122 Query: 2103 tcaacacaaacaaacttcagtctcgatgatcttcttggacttggtgttcctgatacccca 2162 || |||| | ||||||||||| ||||| |||||||| ||||||||||| | || | Sbjct: 24998123 tcgtcacagtccaacttcagtcttgatgaccttcttgggcttggtgttccacaatcctct 24998182 Query: 2163 gcacctccaccgcctcctgcactggccctcaactcaaagcctgtgctagatcctccgact 2222 ||||||||||| |||| ||| || ||||||||||||| |||||||| |||||| ||| Sbjct: 24998183 gcacctccaccagctccagcattgaccctcaactcaaaacctgtgctggatcctggtact 24998242 Query: 2223 ttccagaagaaatggggccaactagcattatccttttctcagg 2265 |||||||||||||||||||| || || |||||||| ||||||| Sbjct: 24998243 ttccagaagaaatggggccagctggccttatccttgtctcagg 24998285 Score = 115 bits (58), Expect = 1e-21 Identities = 100/114 (87%) Strand = Plus / Plus Query: 1531 aggttcgtttgtatcttctgactgcggtgatgaaatgtttctttaagagaccaccagaga 1590 ||||||| ||| |||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24997243 aggttcgcttgcatctcctgactgcggtgatgaaatgtttctttaagaggccaccagaga 24997302 Query: 1591 cacagaagacattaggggctacatttgctgctggtctagctgatactcaccagg 1644 |||| | | || |||| |||||||| | ||||||||| |||| |||||||||| Sbjct: 24997303 cacaaatggcactaggagctacattaaccgctggtctatctgacactcaccagg 24997356 Score = 109 bits (55), Expect = 6e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 1819 agccctcttacatgtttaccgacaaggaacatcgtggaacatttgaatactcagaagatc 1878 |||| |||||||||||||| |||||||| ||||||||| ||||||| ||||| || |||| Sbjct: 24997824 agccatcttacatgtttactgacaaggagcatcgtggaccatttgagtactcggaggatc 24997883 Query: 1879 ttgcaaacttaactgttggggcagaggctccagaaactgtcatttctgcccaaagatacc 1938 || | || || |||| |||||||| | | |||| ||| || ||||||||||| | Sbjct: 24997884 ttacgaatttggctgtcggggcagaaacgacggaaaacaccatctcagcccaaagatatc 24997943 Query: 1939 aagaaaacgataatgatcttctgctaagtacttcagataaagaggacaacggtataagaa 1998 |||||| |||||||||||| ||||||||||||| |||||||||||||| | | | | Sbjct: 24997944 aagaaagtgataatgatcttttgctaagtacttcggataaagaggacaatgcaacagcta 24998003 Query: 1999 gtagcaatggttcttacacctctacatacaatgctccttccgacttg 2045 ||||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 24998004 ccagcaatggttcttctgcctctacctacaatgctccttcagacttg 24998050 Score = 89.7 bits (45), Expect = 6e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 600 caggtggttgccaattgcttgcattcactgcttgagatatggaccctagaagctgccaat 659 ||||| ||||| |||||| ||||| || | | ||||| |||||||||||||| || || Sbjct: 24994816 caggtagttgcgaattgcatgcatgcattacaggagatctggaccctagaagcagctaag 24994875 Query: 660 tcagaggcagcagggagggagattgagacactatatagcaagccagtggtgttttac 716 ||||||| ||| | |||||||||||||||||||||||||||||||| || |||||| Sbjct: 24994876 tcagaggaagctgcaagggagattgagacactatatagcaagccagtagtattttac 24994932 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 24 tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 83 |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| Sbjct: 24990909 tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 24990968 Query: 84 gg 85 || Sbjct: 24990969 gg 24990970
>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0006C01 Length = 153865 Score = 632 bits (319), Expect = e-177 Identities = 469/519 (90%) Strand = Plus / Plus Query: 87 aagagcgaggtgtcggatctgaagcagcagctgcggcagctggcggggagccgtgcacca 146 |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 63600 aagagcgaggtggcggatctgaagcagcagctgcggcagctggcggggagccgcgcgccc 63659 Query: 147 gacgctgatgatcagcgccgggatgtcttcaagcgggtgatctcttgcatgaccgcaggt 206 ||||| || || ||||| |||| |||||||||||||||||||| |||||||| || || Sbjct: 63660 gacgccgacgaccagcggagggacgtcttcaagcgggtgatctcctgcatgacggccggc 63719 Query: 207 atcgacgtctcggcggcgttcggggagatggtgctctgctccgccacctccgacgttgtg 266 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 63720 atcgacgtgtcggcggcgttcggggagatggtgctctgctccgccacctccgacgtcgtg 63779 Query: 267 ctcaagaagatgtgctacctctacgtcggtgtccatgcgcgcgcccatccggacctcgcc 326 || |||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||| Sbjct: 63780 ctgaagaagatgtgctacctctacgtcggcgtccacgcgcgcaaccacccggacctcgcg 63839 Query: 327 ctcctcaccatcaacttcctccagcgcgactgccgcgaccaggaccccaccatccgcggc 386 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 63840 ctcctcaccatcaacttcctccagcgcgactgccacgaccaggaccccaccatacgcggc 63899 Query: 387 cttgctctccgcagcctctgctccctccgcgttccaaaccttgtcgagtaccttgttacg 446 || || ||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 63900 ctggcactccgcagcctctgctccctccgcgttcccaacctcgtcgagtaccttgtctcg 63959 Query: 447 ccgctcaccacagggctgaaggaccctagtgcctacgttcggatggtcgctgctgttggt 506 |||||| |||| ||||| |||||||| ||||| ||||| |||||| |||||||||||||| Sbjct: 63960 ccgctcgccactgggctcaaggaccccagtgcttacgtccggatgatcgctgctgttggt 64019 Query: 507 gctgcaaagctgtatcacatatctgctaccacctgcctcgacgctgacctgcctgctgcg 566 ||||| |||||||||||||||||||| ||| ||||||| || |||||| ||||||| ||| Sbjct: 64020 gctgcgaagctgtatcacatatctgccaccgcctgccttgatgctgacttgcctgcggcg 64079 Query: 567 ctcaaggcacttatgctctcggaccctgatgctcaggtg 605 ||||| || ||||||||||| || |||||||| |||||| Sbjct: 64080 ctcaaagcgcttatgctctctgatcctgatgcacaggtg 64118 Score = 291 bits (147), Expect = 8e-75 Identities = 210/231 (90%) Strand = Plus / Plus Query: 925 aggtttatgaacgcataaaggcacctttgcttactctggtaggtgctgggagtccggagc 984 |||||||||| || ||||| ||||| |||||||||| ||||| ||||||||||| || | Sbjct: 68430 aggtttatgagcgtataaaagcaccactgcttactcttgtaggagctgggagtcctgaac 68489 Query: 985 aatcatattcagtgctatgtcatctgcatcttttggtgatgcgtgctcccatgttatttt 1044 |||||||||| |||||||| ||| ||||||||||||||||||||||||| ||| |||||| Sbjct: 68490 aatcatattctgtgctatgccatttgcatcttttggtgatgcgtgctccaatgctatttt 68549 Query: 1045 cttccgactacaaaagtttctactgccagtttagtgatccttcgtatgtgaagaagctga 1104 | ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 68550 cctccgactacaaaagtttctactgccagttcagtgatccttcatatgtcaagaagctta 68609 Query: 1105 aacttgagatgttgactgctatagcaaatgagagcaacacctatgaaattg 1155 ||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 68610 aacttgagatgctgactgctatagcaaacgagagcaacacctatgaaattg 68660 Score = 262 bits (132), Expect = 7e-66 Identities = 183/200 (91%) Strand = Plus / Plus Query: 729 atcaaagaattcagtgagtgggcacagtgccatgttcttgagttggcgtcaaagttccta 788 |||||||| |||||||||||||||||||||| ||||| || || | |||||| |||||| Sbjct: 67938 atcaaagagttcagtgagtgggcacagtgcctcgttctagaattagtgtcaaacttccta 67997 Query: 789 ccatctgataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcat 848 ||||||||||| || ||||| |||||||| |||||||| |||||||| |||||||||||| Sbjct: 67998 ccatctgataacaacgaaatttttgacatcatgaaccttcttgaggacagacttcagcat 68057 Query: 849 gcaaatggagctgttgttttggcaacaatcaaagtgtttctccacttgacgatgtcaatg 908 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 68058 gcaaatggagctgttgttttggcaacaatcaaagtttttctccacttgacaatgtcaatg 68117 Query: 909 accgatgttcaccagcaggt 928 || ||||||||||||||||| Sbjct: 68118 actgatgttcaccagcaggt 68137 Score = 262 bits (132), Expect = 7e-66 Identities = 168/180 (93%) Strand = Plus / Plus Query: 1641 caggatgttcatgaccgagcacttttctactacaggcttttacaatatgatccggctgta 1700 |||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| Sbjct: 69956 caggatgttcatgaccgagcacttttctactataggcttttgcagtatgatcctgctgtt 70015 Query: 1701 gctgagcgtgtagtaaaccctccgaagcaagctgtctctgtatttgcagacacacagagc 1760 ||||| ||||| ||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 70016 gctgaacgtgttgtaaaccctcccaagcaagctgtctctgtatttgcagatacgcagagc 70075 Query: 1761 agtgaaatcaaagatcggatatttgatgaatttaacagcctatcagttgtatatcagaag 1820 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 70076 agtgaaatcaaagatcggatatttgatgaattcaacagcctatcagtggtatatcagaag 70135 Score = 222 bits (112), Expect = 6e-54 Identities = 187/212 (88%) Strand = Plus / Plus Query: 1323 gtcttggtgaaagatctcttgaggaaatatccccaatggagccatgattgtatagctgtt 1382 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 69049 gtcttggtgaaagatcttttgaggaaatatcctcaatggagccatgattgtatagcagtt 69108 Query: 1383 gttggaaatattagtagtcaaaatattcaagagccaaaaggcaaagcagctctcatatgg 1442 |||||||| || ||||| |||||||||| ||||||||||||||||||||||| |||||| Sbjct: 69109 gttggaaacatcagtagcaaaaatattcaggagccaaaaggcaaagcagctcttatatgg 69168 Query: 1443 atgttgggtgaatattctcaagatatgcatgatgctccatatgttcttgaaaatatcgtt 1502 ||||| || |||||||| ||||| ||||||||||||||||| ||||||| | | ||||| Sbjct: 69169 atgttaggagaatattcacaagacatgcatgatgctccatacattcttgagagtctcgtt 69228 Query: 1503 gtgaactgggatgaggagcagtctcccgaggt 1534 | || ||||| || ||||| ||||| ||||| Sbjct: 69229 gaaaattgggaggaagagcactctcctgaggt 69260 Score = 214 bits (108), Expect = 1e-51 Identities = 258/308 (83%) Strand = Plus / Plus Query: 2261 tcaggaatgctctttaagtccacaaggagcagcttctttgatgaatccccaatcgctcat 2320 ||||||||| || |||||||||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 71195 tcaggaatgttcattaagtccacaaggagcagcatcattgatgaatcctcaatcactcat 71254 Query: 2321 tcgtcatatgcaaagcaactacattcaatgcattgcttcaggcggtcagcctccaaatta 2380 ||| |||||||||| |||||||||||| || ||||||||||| || ||||| ||||| || Sbjct: 71255 tcgacatatgcaaaacaactacattcagtgtattgcttcaggtggccagcccccaaacta 71314 Query: 2381 caagttctacttttatggtcagaaagctggggctgctgccgtctaccttgtagaatgcat 2440 |||||||| || |||| ||| || | ||| ||| | || ||| |||||||||||| || Sbjct: 71315 caagttctttttctatgctcaaaaggatggtgctaccgctttcttccttgtagaatgtat 71374 Query: 2441 tgtgaacacagcatcagcgaaggcccagctcaaaattaaggtcgaggatgggactactgc 2500 || |||||||||||||||||||| ||| ||||| | |||| || |||||||| |||| Sbjct: 71375 cgtcaacacagcatcagcgaaggcacagatcaaagtgaaggctgatgatgggaccgctgc 71434 Query: 2501 tgacgcattttctactttgtttcaatcagtattgtcccaatttgggcgttcttgattgtg 2560 || |||||||| || |||||||| |||| |||||| ||||||||| |||||||| || Sbjct: 71435 agaggcattttcaacgttgtttcagtcagctttgtccaaatttgggctttcttgatcctg 71494 Query: 2561 agcatttt 2568 |||||||| Sbjct: 71495 agcatttt 71502 Score = 194 bits (98), Expect = 1e-45 Identities = 152/170 (89%) Strand = Plus / Plus Query: 1155 gtaaccgagctgtgtgaatacgctggaaatgttgatgtaccaattgcaagagagtctatc 1214 ||||| ||| |||||||||| ||||||||||||||||||||||| ||| | |||||||| Sbjct: 68781 gtaactgagttgtgtgaatatgctggaaatgttgatgtaccaatcgcacgtgagtctatt 68840 Query: 1215 agagcagttggaaaaatagctctgcagcaatatgatgtgaatgctatcgttgataggctt 1274 |||||||||| |||||||| |||||||| ||||||||||||||||| ||||| |||||| Sbjct: 68841 cgagcagttgggaaaatagcgctgcagcagtatgatgtgaatgctattgttgacaggctt 68900 Query: 1275 ctacaatttcttgaaatggacaaggattatgtgactgctgagactcttgt 1324 || ||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 68901 ctgcaattccttgaaatggacaaggaatatgtgacggctgaaactcttgt 68950 Score = 133 bits (67), Expect = 4e-27 Identities = 184/223 (82%) Strand = Plus / Plus Query: 2043 ttgctcagttcgcaaacaccagctgaaactgcactaataaatcctggtagttcgacatat 2102 ||||| ||||| |||| ||| |||||||| ||||||||||||||||| | |||||| Sbjct: 70586 ttgcttagttcacaaataccgtctgaaacttcactaataaatcctggtgcacctacatat 70645 Query: 2103 tcaacacaaacaaacttcagtctcgatgatcttcttggacttggtgttcctgatacccca 2162 || |||| | ||||||||||| ||||| |||||||| ||||||||||| | || | Sbjct: 70646 tcgtcacagtccaacttcagtcttgatgaccttcttgggcttggtgttccacaatcctct 70705 Query: 2163 gcacctccaccgcctcctgcactggccctcaactcaaagcctgtgctagatcctccgact 2222 ||||||||||| |||| ||| || ||||||||||||| |||||||| |||||| ||| Sbjct: 70706 gcacctccaccagctccagcattgaccctcaactcaaaacctgtgctggatcctggtact 70765 Query: 2223 ttccagaagaaatggggccaactagcattatccttttctcagg 2265 |||||||||||||||||||| || || |||||||| ||||||| Sbjct: 70766 ttccagaagaaatggggccagctggccttatccttgtctcagg 70808 Score = 115 bits (58), Expect = 1e-21 Identities = 100/114 (87%) Strand = Plus / Plus Query: 1531 aggttcgtttgtatcttctgactgcggtgatgaaatgtttctttaagagaccaccagaga 1590 ||||||| ||| |||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 69766 aggttcgcttgcatctcctgactgcggtgatgaaatgtttctttaagaggccaccagaga 69825 Query: 1591 cacagaagacattaggggctacatttgctgctggtctagctgatactcaccagg 1644 |||| | | || |||| |||||||| | ||||||||| |||| |||||||||| Sbjct: 69826 cacaaatggcactaggagctacattaaccgctggtctatctgacactcaccagg 69879 Score = 109 bits (55), Expect = 6e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 1819 agccctcttacatgtttaccgacaaggaacatcgtggaacatttgaatactcagaagatc 1878 |||| |||||||||||||| |||||||| ||||||||| ||||||| ||||| || |||| Sbjct: 70347 agccatcttacatgtttactgacaaggagcatcgtggaccatttgagtactcggaggatc 70406 Query: 1879 ttgcaaacttaactgttggggcagaggctccagaaactgtcatttctgcccaaagatacc 1938 || | || || |||| |||||||| | | |||| ||| || ||||||||||| | Sbjct: 70407 ttacgaatttggctgtcggggcagaaacgacggaaaacaccatctcagcccaaagatatc 70466 Query: 1939 aagaaaacgataatgatcttctgctaagtacttcagataaagaggacaacggtataagaa 1998 |||||| |||||||||||| ||||||||||||| |||||||||||||| | | | | Sbjct: 70467 aagaaagtgataatgatcttttgctaagtacttcggataaagaggacaatgcaacagcta 70526 Query: 1999 gtagcaatggttcttacacctctacatacaatgctccttccgacttg 2045 ||||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 70527 ccagcaatggttcttctgcctctacctacaatgctccttcagacttg 70573 Score = 89.7 bits (45), Expect = 6e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 600 caggtggttgccaattgcttgcattcactgcttgagatatggaccctagaagctgccaat 659 ||||| ||||| |||||| ||||| || | | ||||| |||||||||||||| || || Sbjct: 67339 caggtagttgcgaattgcatgcatgcattacaggagatctggaccctagaagcagctaag 67398 Query: 660 tcagaggcagcagggagggagattgagacactatatagcaagccagtggtgttttac 716 ||||||| ||| | |||||||||||||||||||||||||||||||| || |||||| Sbjct: 67399 tcagaggaagctgcaagggagattgagacactatatagcaagccagtagtattttac 67455 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 24 tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 83 |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| Sbjct: 63432 tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 63491 Query: 84 gg 85 || Sbjct: 63492 gg 63493
>gb|AY109091.1| Zea mays PCO149758 mRNA sequence Length = 1014 Score = 315 bits (159), Expect = 5e-82 Identities = 321/375 (85%) Strand = Plus / Plus Query: 2182 cactggccctcaactcaaagcctgtgctagatcctccgactttccagaagaaatggggcc 2241 |||||||||| |||||||||||||||||||||||| || ||||||| ||||||||||| Sbjct: 378 cactggcccttaactcaaagcctgtgctagatcctggtacgttccagaggaaatggggcc 437 Query: 2242 aactagcattatccttttctcaggaatgctctttaagtccacaaggagcagcttctttga 2301 | |||||||| | | ||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 438 agctagcattggcactgtctcaggaatgttctttgagtccacaaggggcagtagctttga 497 Query: 2302 tgaatccccaatcgctcattcgtcatatgcaaagcaactacattcaatgcattgcttcag 2361 ||||||||||||| ||||| ||||||||||||||||| |||| ||||| |||||||||| Sbjct: 498 tgaatccccaatcactcatccgtcatatgcaaagcaatcacatccaatgtattgcttcag 557 Query: 2362 gcggtcagcctccaaattacaagttctacttttatggtcagaaagctggggctgctgccg 2421 ||||||||||||| || |||||||||| || |||| ||| |||| |||||||||||| Sbjct: 558 gcggtcagcctccgaactacaagttctttttctatgctcaaaaagatggggctgctgctt 617 Query: 2422 tctaccttgtagaatgcattgtgaacacagcatcagcgaaggcccagctcaaaattaagg 2481 ||| |||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 618 tcttccttgttgaatgtattgtcaacacagcatcagcgaaggcacagctcaaaatcaagg 677 Query: 2482 tcgaggatgggactactgctgacgcattttctactttgtttcaatcagtattgtcccaat 2541 || ||||| ||| ||||||| ||||| || | ||||||||| |||| |||||| ||| Sbjct: 678 ctgatgatggaactgctgctgaggcattctcgagtttgtttcagtcagccttgtccaaat 737 Query: 2542 ttgggcgttcttgat 2556 |||||| |||||||| Sbjct: 738 ttgggctttcttgat 752 Score = 182 bits (92), Expect = 5e-42 Identities = 128/140 (91%) Strand = Plus / Plus Query: 1902 gaggctccagaaactgtcatttctgcccaaagataccaagaaaacgataatgatcttctg 1961 |||| |||||||| ||| ||||||||||||||||| |||||||| |||||||||||| || Sbjct: 89 gaggatccagaaaatgtaatttctgcccaaagatatcaagaaaatgataatgatcttttg 148 Query: 1962 ctaagtacttcagataaagaggacaacggtataagaagtagcaatggttcttacacctct 2021 |||||||||||||||||||||||||| |||| |||| ||||||||||||| ||||||| Sbjct: 149 ctaagtacttcagataaagaggacaatggtacaagagccagcaatggttcttccacctct 208 Query: 2022 acatacaatgctccttccga 2041 |||||||||||||||||||| Sbjct: 209 acatacaatgctccttccga 228 Score = 77.8 bits (39), Expect = 2e-10 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1806 gttgtatatcagaagccctcttacatgtttaccgacaaggaacatcgtggaacatttgaa 1865 ||||||||||||||||| || ||||||||||| || ||||| ||||| ||| ||||||| Sbjct: 2 gttgtatatcagaagccatcgtacatgtttacagataaggagcatcgcggaccatttgag 61 Query: 1866 tactcagaagatctt 1880 |||||||| |||||| Sbjct: 62 tactcagaggatctt 76 Score = 77.8 bits (39), Expect = 2e-10 Identities = 77/89 (86%), Gaps = 3/89 (3%) Strand = Plus / Plus Query: 2052 tcgcaaacaccagctgaaactgcactaataaatcctggtagttcgacatattcaacacaa 2111 |||||| |||||||||||||| ||||| ||||| ||||| | ||||||||| ||||| Sbjct: 254 tcgcaagcaccagctgaaacttcactagtaaatactggtgg---gacatattcctcacaa 310 Query: 2112 acaaacttcagtctcgatgatcttcttgg 2140 ||||||||||||||||||| |||||||| Sbjct: 311 tcaaacttcagtctcgatgaccttcttgg 339
>dbj|AK229673.1| Arabidopsis thaliana mRNA for beta-adaptin-like protein A, clone: RAFL19-90-C14 Length = 2838 Score = 165 bits (83), Expect = 1e-36 Identities = 341/427 (79%) Strand = Plus / Plus Query: 1061 tttctactgccagtttagtgatccttcgtatgtgaagaagctgaaacttgagatgttgac 1120 |||||||||||||| | ||| || || ||||| || ||| |||| |||||||||||||| Sbjct: 1175 tttctactgccagtacaatgaaccatcatatgtcaaaaagttgaagcttgagatgttgac 1234 Query: 1121 tgctatagcaaatgagagcaacacctatgaaattgtaaccgagctgtgtgaatacgctgg 1180 |||| | ||||| ||||||||||| || ||||| || || || |||||||| || |||| Sbjct: 1235 tgctgttgcaaacgagagcaacacttacgaaatcgtgacggaactgtgtgagtatgctgc 1294 Query: 1181 aaatgttgatgtaccaattgcaagagagtctatcagagcagttggaaaaatagctctgca 1240 ||| |||||| | ||||||| |||||||| || ||||||||||||| || ||| |||| Sbjct: 1295 aaacgttgatattgcaattgcgagagagtcaattcgagcagttggaaagattgctttgca 1354 Query: 1241 gcaatatgatgtgaatgctatcgttgataggcttctacaatttcttgaaatggacaagga 1300 || |||||||| ||||| || |||||||| ||||| |||||||| || ||||| ||||| Sbjct: 1355 acagtatgatgtaaatgcgattgttgatagacttcttcaatttctggagatggaaaagga 1414 Query: 1301 ttatgtgactgctgagactcttgtcttggtgaaagatctcttgaggaaatatccccaatg 1360 |||||||| ||||| ||| | || | || || || || | ||||| ||||| ||||| Sbjct: 1415 ctatgtgaccgctgaaactttggttcttgtaaaggaccttctaaggaagtatccacaatg 1474 Query: 1361 gagccatgattgtatagctgttgttggaaatattagtagtcaaaatattcaagagccaaa 1420 ||||||||| || || |||||||||| ||| || || ||||||| || || || || Sbjct: 1475 gagccatgactgcatttctgttgttgggggtatcagcagcaaaaatatccaggaaccgaa 1534 Query: 1421 aggcaaagcagctctcatatggatgttgggtgaatattctcaagatatgcatgatgctcc 1480 || ||| || ||||| ||||||||||||||||| ||| | || || ||| ||||||||| Sbjct: 1535 agccaaggcggctcttatatggatgttgggtgagtatgcacaggacatgagtgatgctcc 1594 Query: 1481 atatgtt 1487 |||||| Sbjct: 1595 ttatgtt 1601 Score = 85.7 bits (43), Expect = 9e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 1743 tttgcagacacacagagcagtgaaatcaaagatcggatatttgatgaatttaacagccta 1802 ||||| ||||| || ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 1857 tttgctgacactcaaagcagtgaaatcaaagaccgtgtatttgacgagtttaacagcctt 1916 Query: 1803 tcagttgtatatcagaagccctcttacatgtttaccgacaaggaaca 1849 || || |||| |||||||| |||||||||||||| || |||||||| Sbjct: 1917 tctgtgatataccagaagccatcttacatgtttacggataaggaaca 1963 Score = 73.8 bits (37), Expect = 3e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 795 gataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcatgcaaat 854 |||| |||||| || |||||||| ||||| ||| | || || ||||| |||||||| ||| Sbjct: 909 gatagtaatgatatttttgacattatgaatctgttggaagacagactgcagcatgccaat 968 Query: 855 ggagctgttgttttggcaacaatcaaagtgttt 887 ||||||||||| ||||| ||| ||||||||||| Sbjct: 969 ggagctgttgtcttggcgacagtcaaagtgttt 1001 Score = 48.1 bits (24), Expect = 0.19 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1637 tcaccaggatgttcatgaccgagc 1660 |||||||||||||||||||||||| Sbjct: 1751 tcaccaggatgttcatgaccgagc 1774
>ref|NM_121187.2| Arabidopsis thaliana unknown protein (AT5G11490) mRNA, complete cds Length = 2813 Score = 165 bits (83), Expect = 1e-36 Identities = 341/427 (79%) Strand = Plus / Plus Query: 1061 tttctactgccagtttagtgatccttcgtatgtgaagaagctgaaacttgagatgttgac 1120 |||||||||||||| | ||| || || ||||| || ||| |||| |||||||||||||| Sbjct: 1156 tttctactgccagtacaatgaaccatcatatgtcaaaaagttgaagcttgagatgttgac 1215 Query: 1121 tgctatagcaaatgagagcaacacctatgaaattgtaaccgagctgtgtgaatacgctgg 1180 |||| | ||||| ||||||||||| || ||||| || || || |||||||| || |||| Sbjct: 1216 tgctgttgcaaacgagagcaacacttacgaaatcgtgacggaactgtgtgagtatgctgc 1275 Query: 1181 aaatgttgatgtaccaattgcaagagagtctatcagagcagttggaaaaatagctctgca 1240 ||| |||||| | ||||||| |||||||| || ||||||||||||| || ||| |||| Sbjct: 1276 aaacgttgatattgcaattgcgagagagtcaattcgagcagttggaaagattgctttgca 1335 Query: 1241 gcaatatgatgtgaatgctatcgttgataggcttctacaatttcttgaaatggacaagga 1300 || |||||||| ||||| || |||||||| ||||| |||||||| || ||||| ||||| Sbjct: 1336 acagtatgatgtaaatgcgattgttgatagacttcttcaatttctggagatggaaaagga 1395 Query: 1301 ttatgtgactgctgagactcttgtcttggtgaaagatctcttgaggaaatatccccaatg 1360 |||||||| ||||| ||| | || | || || || || | ||||| ||||| ||||| Sbjct: 1396 ctatgtgaccgctgaaactttggttcttgtaaaggaccttctaaggaagtatccacaatg 1455 Query: 1361 gagccatgattgtatagctgttgttggaaatattagtagtcaaaatattcaagagccaaa 1420 ||||||||| || || |||||||||| ||| || || ||||||| || || || || Sbjct: 1456 gagccatgactgcatttctgttgttgggggtatcagcagcaaaaatatccaggaaccgaa 1515 Query: 1421 aggcaaagcagctctcatatggatgttgggtgaatattctcaagatatgcatgatgctcc 1480 || ||| || ||||| ||||||||||||||||| ||| | || || ||| ||||||||| Sbjct: 1516 agccaaggcggctcttatatggatgttgggtgagtatgcacaggacatgagtgatgctcc 1575 Query: 1481 atatgtt 1487 |||||| Sbjct: 1576 ttatgtt 1582 Score = 85.7 bits (43), Expect = 9e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 1743 tttgcagacacacagagcagtgaaatcaaagatcggatatttgatgaatttaacagccta 1802 ||||| ||||| || ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 1838 tttgctgacactcaaagcagtgaaatcaaagaccgtgtatttgacgagtttaacagcctt 1897 Query: 1803 tcagttgtatatcagaagccctcttacatgtttaccgacaaggaaca 1849 || || |||| |||||||| |||||||||||||| || |||||||| Sbjct: 1898 tctgtgatataccagaagccatcttacatgtttacggataaggaaca 1944 Score = 81.8 bits (41), Expect = 1e-11 Identities = 80/93 (86%) Strand = Plus / Plus Query: 795 gataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcatgcaaat 854 |||| |||||| || |||||||| ||||| ||| | || || ||||| |||||||| ||| Sbjct: 890 gatagtaatgatatttttgacattatgaatctgttggaagacagactgcagcatgccaat 949 Query: 855 ggagctgttgttttggcaacaatcaaagtgttt 887 ||||||||||| ||||||||| ||||||||||| Sbjct: 950 ggagctgttgtcttggcaacagtcaaagtgttt 982 Score = 48.1 bits (24), Expect = 0.19 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1637 tcaccaggatgttcatgaccgagc 1660 |||||||||||||||||||||||| Sbjct: 1732 tcaccaggatgttcatgaccgagc 1755
>gb|AF216385.1|AF216385 Arabidopsis thaliana beta-adaptin-like protein A mRNA, complete cds Length = 2810 Score = 165 bits (83), Expect = 1e-36 Identities = 341/427 (79%) Strand = Plus / Plus Query: 1061 tttctactgccagtttagtgatccttcgtatgtgaagaagctgaaacttgagatgttgac 1120 |||||||||||||| | ||| || || ||||| || ||| |||| |||||||||||||| Sbjct: 1162 tttctactgccagtacaatgaaccatcatatgtcaaaaagttgaagcttgagatgttgac 1221 Query: 1121 tgctatagcaaatgagagcaacacctatgaaattgtaaccgagctgtgtgaatacgctgg 1180 |||| | ||||| ||||||||||| || ||||| || || || |||||||| || |||| Sbjct: 1222 tgctgttgcaaacgagagcaacacttacgaaatcgtgacggaactgtgtgagtatgctgc 1281 Query: 1181 aaatgttgatgtaccaattgcaagagagtctatcagagcagttggaaaaatagctctgca 1240 ||| |||||| | ||||||| |||||||| || ||||||||||||| || ||| |||| Sbjct: 1282 aaacgttgatattgcaattgcgagagagtcaattcgagcagttggaaagattgctttgca 1341 Query: 1241 gcaatatgatgtgaatgctatcgttgataggcttctacaatttcttgaaatggacaagga 1300 || |||||||| ||||| || |||||||| ||||| |||||||| || ||||| ||||| Sbjct: 1342 acagtatgatgtaaatgcgattgttgatagacttcttcaatttctggagatggaaaagga 1401 Query: 1301 ttatgtgactgctgagactcttgtcttggtgaaagatctcttgaggaaatatccccaatg 1360 |||||||| ||||| ||| | || | || || || || | ||||| ||||| ||||| Sbjct: 1402 ctatgtgaccgctgaaactttggttcttgtaaaggaccttctaaggaagtatccacaatg 1461 Query: 1361 gagccatgattgtatagctgttgttggaaatattagtagtcaaaatattcaagagccaaa 1420 ||||||||| || || |||||||||| ||| || || ||||||| || || || || Sbjct: 1462 gagccatgactgcatttctgttgttgggggtatcagcagcaaaaatatccaggaaccgaa 1521 Query: 1421 aggcaaagcagctctcatatggatgttgggtgaatattctcaagatatgcatgatgctcc 1480 || ||| || ||||| ||||||||||||||||| ||| | || || ||| ||||||||| Sbjct: 1522 agccaaggcggctcttatatggatgttgggtgagtatgcacaggacatgagtgatgctcc 1581 Query: 1481 atatgtt 1487 |||||| Sbjct: 1582 ttatgtt 1588 Score = 85.7 bits (43), Expect = 9e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 1743 tttgcagacacacagagcagtgaaatcaaagatcggatatttgatgaatttaacagccta 1802 ||||| ||||| || ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 1844 tttgctgacactcaaagcagtgaaatcaaagaccgtgtatttgacgagtttaacagcctt 1903 Query: 1803 tcagttgtatatcagaagccctcttacatgtttaccgacaaggaaca 1849 || || |||| |||||||| |||||||||||||| || |||||||| Sbjct: 1904 tctgtgatataccagaagccatcttacatgtttacggataaggaaca 1950 Score = 81.8 bits (41), Expect = 1e-11 Identities = 80/93 (86%) Strand = Plus / Plus Query: 795 gataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcatgcaaat 854 |||| |||||| || |||||||| ||||| ||| | || || ||||| |||||||| ||| Sbjct: 896 gatagtaatgatatttttgacattatgaatctgttggaagacagactgcagcatgccaat 955 Query: 855 ggagctgttgttttggcaacaatcaaagtgttt 887 ||||||||||| ||||||||| ||||||||||| Sbjct: 956 ggagctgttgtcttggcaacagtcaaagtgttt 988 Score = 48.1 bits (24), Expect = 0.19 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1637 tcaccaggatgttcatgaccgagc 1660 |||||||||||||||||||||||| Sbjct: 1738 tcaccaggatgttcatgaccgagc 1761
>gb|AY104493.1| Zea mays PCO154816 mRNA sequence Length = 1164 Score = 151 bits (76), Expect = 2e-32 Identities = 143/164 (87%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 729 atcaaagaattcagtgagtgggcacagtgccatgttcttgagttggcgtcaaagttccta 788 |||||||| || ||||| ||| |||||||| |||||||||||||| ||||||||||| Sbjct: 651 atcaaagagtttagtgaatggccacagtgc-atgttcttgagttgcaatcaaagttcctt 709 Query: 789 ccatctgataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcat 848 |||| | ||||||| ||||||||||||||||||| ||| | |||||||||||||| ||| Sbjct: 710 ccatataataataacaaaatatttgacataatgaatctgttggaggatagacttcaacat 769 Query: 849 gcaaatggagctgttgttttggcaacaatcaaagtgtttctcca 892 |||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 770 gcaaatggagtcgttgttttggcaacaattaaagtttttctcca 813
>ref|NM_001050161.1| Oryza sativa (japonica cultivar-group) Os01g0626200 (Os01g0626200) mRNA, partial cds Length = 599 Score = 101 bits (51), Expect = 1e-17 Identities = 120/143 (83%) Strand = Plus / Plus Query: 2426 ccttgtagaatgcattgtgaacacagcatcagcgaaggcccagctcaaaattaaggtcga 2485 |||||||||||| || || |||||||||||||||||||| ||| ||||| | |||| || Sbjct: 34 ccttgtagaatgtatcgtcaacacagcatcagcgaaggcacagatcaaagtgaaggctga 93 Query: 2486 ggatgggactactgctgacgcattttctactttgtttcaatcagtattgtcccaatttgg 2545 |||||||| |||| || |||||||| || |||||||| |||| |||||| ||||||| Sbjct: 94 tgatgggaccgctgcagaggcattttcaacgttgtttcagtcagctttgtccaaatttgg 153 Query: 2546 gcgttcttgattgtgagcatttt 2568 || |||||||| |||||||||| Sbjct: 154 gctttcttgatcctgagcatttt 176
>dbj|AK061897.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G12, full insert sequence Length = 599 Score = 101 bits (51), Expect = 1e-17 Identities = 120/143 (83%) Strand = Plus / Plus Query: 2426 ccttgtagaatgcattgtgaacacagcatcagcgaaggcccagctcaaaattaaggtcga 2485 |||||||||||| || || |||||||||||||||||||| ||| ||||| | |||| || Sbjct: 34 ccttgtagaatgtatcgtcaacacagcatcagcgaaggcacagatcaaagtgaaggctga 93 Query: 2486 ggatgggactactgctgacgcattttctactttgtttcaatcagtattgtcccaatttgg 2545 |||||||| |||| || |||||||| || |||||||| |||| |||||| ||||||| Sbjct: 94 tgatgggaccgctgcagaggcattttcaacgttgtttcagtcagctttgtccaaatttgg 153 Query: 2546 gcgttcttgattgtgagcatttt 2568 || |||||||| |||||||||| Sbjct: 154 gctttcttgatcctgagcatttt 176
>emb|AL163815.1|ATF15N18 Arabidopsis thaliana DNA chromosome 5, BAC clone F15N18 (ESSA project) Length = 101665 Score = 95.6 bits (48), Expect = 9e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 1164 ctgtgtgaatacgctggaaatgttgatgtaccaattgcaagagagtctatcagagcagtt 1223 |||||||| || |||| ||| |||||| | ||||||| |||||||| || |||||||| Sbjct: 35842 ctgtgtgagtatgctgcaaacgttgatattgcaattgcgagagagtcaattcgagcagtt 35901 Query: 1224 ggaaaaatagctctgcagcaatatgatgtgaatgctatcgttgataggcttctacaattt 1283 ||||| || ||| |||| || |||||||| ||||| || |||||||| ||||| |||||| Sbjct: 35902 ggaaagattgctttgcaacagtatgatgtaaatgcgattgttgatagacttcttcaattt 35961 Query: 1284 cttgaaatggacaaggattatgtgactgctga 1315 || || ||||| ||||| |||||||| ||||| Sbjct: 35962 ctggagatggaaaaggactatgtgaccgctga 35993 Score = 81.8 bits (41), Expect = 1e-11 Identities = 80/93 (86%) Strand = Plus / Plus Query: 795 gataataatgaaatatttgacataatgaacctgcttgaggatagacttcagcatgcaaat 854 |||| |||||| || |||||||| ||||| ||| | || || ||||| |||||||| ||| Sbjct: 35128 gatagtaatgatatttttgacattatgaatctgttggaagacagactgcagcatgccaat 35187 Query: 855 ggagctgttgttttggcaacaatcaaagtgttt 887 ||||||||||| ||||||||| ||||||||||| Sbjct: 35188 ggagctgttgtcttggcaacagtcaaagtgttt 35220 Score = 65.9 bits (33), Expect = 8e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 1061 tttctactgccagtttagtgatccttcgtatgtgaagaagctgaaacttgagatgttgac 1120 |||||||||||||| | ||| || || ||||| || ||| |||| |||||||||||||| Sbjct: 35642 tttctactgccagtacaatgaaccatcatatgtcaaaaagttgaagcttgagatgttgac 35701 Query: 1121 tgctatagcaaatgagagcaacacctatgaaat 1153 |||| | ||||| ||||||||||| || ||||| Sbjct: 35702 tgctgttgcaaacgagagcaacacttacgaaat 35734 Score = 56.0 bits (28), Expect = 8e-04 Identities = 115/144 (79%) Strand = Plus / Plus Query: 1344 aggaaatatccccaatggagccatgattgtatagctgttgttggaaatattagtagtcaa 1403 ||||| ||||| |||||||||||||| || || |||||||||| ||| || || || Sbjct: 36126 aggaagtatccacaatggagccatgactgcatttctgttgttgggggtatcagcagcaaa 36185 Query: 1404 aatattcaagagccaaaaggcaaagcagctctcatatggatgttgggtgaatattctcaa 1463 ||||| || || || |||| ||| || ||||| ||||||||||||||||| ||| | || Sbjct: 36186 aatatccaggaaccgaaagccaaggcggctcttatatggatgttgggtgagtatgcacag 36245 Query: 1464 gatatgcatgatgctccatatgtt 1487 || ||| ||||||||| |||||| Sbjct: 36246 gacatgagtgatgctccttatgtt 36269 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1743 tttgcagacacacagagcagtgaaatcaaagatcggatatttgatgaatttaacagcct 1801 ||||| ||||| || ||||||||||||||||| || ||||||| || ||||||||||| Sbjct: 36732 tttgctgacactcaaagcagtgaaatcaaagaccgtgtatttgacgagtttaacagcct 36790
>gb|DQ067243.1| Brassica napus clone CA39 AFLP fragment, mRNA sequence Length = 161 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1740 gtatttgcagacacacagagcagtgaaatcaaagatcggatatttga 1786 |||||||| ||||| || ||||||||||||||||| || |||||||| Sbjct: 114 gtatttgctgacactcaaagcagtgaaatcaaagaccgtatatttga 160
>gb|AC092327.4| Homo sapiens chromosome 16 clone RP11-158I3, complete sequence Length = 189756 Score = 46.1 bits (23), Expect = 0.75 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2169 ccaccgcctcctgcactggccct 2191 ||||||||||||||||||||||| Sbjct: 147890 ccaccgcctcctgcactggccct 147868
>emb|AL592494.4| Human DNA sequence from clone RP11-344P13 on chromosome 1 Contains a novel gene, a embigin (Emb) (MGC71745) pseudogene, a mitochondrial translational initiation factor 2 (MTIF2) pseudogene, a novel gene, the 3' end of a novel gene and two CpG islands, complete sequence Length = 165908 Score = 46.1 bits (23), Expect = 0.75 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1559 gatgaaatgtttctttaagagac 1581 ||||||||||||||||||||||| Sbjct: 65244 gatgaaatgtttctttaagagac 65222
>gb|EF043284.1| Adonis palaestina deoxyxylulose-5-phosphate synthase (Dxs1) mRNA, complete cds Length = 2420 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1610 tacatttgctgctggtctagct 1631 |||||||||||||||||||||| Sbjct: 1421 tacatttgctgctggtctagct 1442
>ref|XM_001107738.1| PREDICTED: Macaca mulatta similar to SH3-binding domain protein 5-like, transcript variant 2 (LOC710289), mRNA Length = 3978 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 gccttcgccggcgaagtccgcc 65 |||||||||||||||||||||| Sbjct: 379 gccttcgccggcgaagtccgcc 400
>gb|AC114930.2| Homo sapiens chromosome 5 clone CTD-2017A19, complete sequence Length = 100233 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1474 atgctccatatgttcttgaaaa 1495 |||||||||||||||||||||| Sbjct: 34739 atgctccatatgttcttgaaaa 34718
>gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosome 16, complete sequence Length = 193598 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1137 agcaacacctatgaaattgtaa 1158 |||||||||||||||||||||| Sbjct: 90326 agcaacacctatgaaattgtaa 90347
>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence Length = 200787 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1137 agcaacacctatgaaattgtaa 1158 |||||||||||||||||||||| Sbjct: 31263 agcaacacctatgaaattgtaa 31242
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 tcctcaccatcaacttcctcca 349 |||||||||||||||||||||| Sbjct: 12456 tcctcaccatcaacttcctcca 12477
>gb|AC073242.10| Homo sapiens 3 BAC RP11-89N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 30157 Score = 44.1 bits (22), Expect = 3.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1060 gtttctactgccagtttagtga 1081 |||||||||||||||||||||| Sbjct: 15171 gtttctactgccagtttagtga 15150
>emb|AL137079.1|ATT27B3 Arabidopsis thaliana DNA chromosome 3, BAC clone T27B3 Length = 80450 Score = 44.1 bits (22), Expect = 3.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1441 ggatgttgggtgaatattctcaagatatgcatga 1474 |||| ||||| ||||||||||| ||||||||||| Sbjct: 57107 ggattttgggagaatattctcaggatatgcatga 57140 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 573,129,048 Number of extensions: 30251449 Number of successful extensions: 162689 Number of sequences better than 10.0: 23 Number of HSP's gapped: 162679 Number of HSP's successfully gapped: 70 Length of query: 3058 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3035 Effective length of database: 18,503,978,556 Effective search space: 56159574917460 Effective search space used: 56159574917460 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
