ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf17n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os12g0577000:Os12g0577000 27 8.7

>Os12g0577000:Os12g0577000 |
          Length = 980
 Score = 26.6 bits (57), Expect = 8.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -1

Query: 369 TPDTTKSNDNRPTKVQVSGISELTDGMNGAIVPRKYIRSQP 247
           TP TT++++   +   ++  SE++  +NG ++ R   R +P
Sbjct: 193 TPTTTRADEIDVSYPSIASSSEVSFPINGVVLRRSIARDEP 233


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 9,217,693
Number of extensions: 149093
Number of successful extensions: 337
Number of sequences better than 10.0: 1
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 66
Effective length of database: 11,716,083
Effective search space: 773261478
Effective search space used: 773261478
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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