ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf17n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P18734:ZG67_XENLA Gastrula zinc finger protein XLCGF67.1 - Xenop... 32 0.78
2Q96R72:OR4K3_HUMAN Olfactory receptor 4K3 - Homo sapiens (Human) 32 0.79
3Q86UE3:ZN546_HUMAN Zinc finger protein 546 - Homo sapiens (Human) 31 2.3
4Q8NH41:OR4KF_HUMAN Olfactory receptor 4K15 - Homo sapiens (Human) 30 3.9
5Q9P2E8:MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 precursor ... 29 6.7
6P10075:GLI4_HUMAN Zinc finger protein GLI4 - Homo sapiens (Human) 29 8.6
7Q8NH43:OR4L1_HUMAN Olfactory receptor 4L1 - Homo sapiens (Human) 29 8.8

>P18734:ZG67_XENLA Gastrula zinc finger protein XLCGF67.1 - Xenopus laevis (African|
           clawed frog)
          Length = 139
 Score = 32.3 bits (72), Expect = 0.78
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 252 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF 353
           +CG +FL+R H ++HL T   +KP     C +CF
Sbjct: 37  ECGKSFLSRSHLNTHLRTHTGEKPYSCSECGKCF 70



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>Q96R72:OR4K3_HUMAN Olfactory receptor 4K3 - Homo sapiens (Human)|
          Length = 315

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
 Frame = +1

Query: 262 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAIMTNLWNRMNT 408
           ILSW  G  H + QLA++ NL F             P+++  +C+ ++ +   + +    
Sbjct: 146 ILSWIVGIFHALSQLAFTVNLPFCGPNEVDSFFCDLPLVIKLACVDTYILGVFMISTSGM 205

Query: 409 V-LELYLLLIFGHRVFLAKKKKK 474
           + L  ++LL+  + + L   +++
Sbjct: 206 IALVCFILLVISYTIILVTVRQR 228



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>Q86UE3:ZN546_HUMAN Zinc finger protein 546 - Homo sapiens (Human)|
          Length = 836

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 252 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF*LYQEFCYHDQ---SMEPYE 404
           +CG TF +R+H + H      +KP +   C + F L  E   H +     +PYE
Sbjct: 501 ECGKTFSSRYHLTQHYRIHTGEKPYICNECGKAFRLQGELTRHHRIHTCEKPYE 554



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>Q8NH41:OR4KF_HUMAN Olfactory receptor 4K15 - Homo sapiens (Human)|
          Length = 324

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
 Frame = +1

Query: 262 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAIMTNLWNRMNT 408
           ++SW  G IH   QLA++ NL F             P++   +CI ++ +   +      
Sbjct: 146 LISWFVGFIHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSLLIVADSGF 205

Query: 409 V-LELYLLLIFGHRVFLAKKKKK 474
           + L  +LLL+  + V L   + +
Sbjct: 206 LSLSSFLLLVVSYTVILVTVRNR 228



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>Q9P2E8:MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 precursor - Homo sapiens (Human)|
          Length = 410

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 202 WW*WCAVASYVCLWLRLTADILSWHDGTIHPICQLAYS 315
           WW WC  + + C  L   A  +  H G +   C++ ++
Sbjct: 10  WWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFN 47



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>P10075:GLI4_HUMAN Zinc finger protein GLI4 - Homo sapiens (Human)|
          Length = 376

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 252 DCGYTFLARWHHSSHLSTRLFQKPAL**ACYRCF*LYQEFCYHDQ 386
           DCG  F  R H   HL T   +KP    AC + F    +   H +
Sbjct: 327 DCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQR 371



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>Q8NH43:OR4L1_HUMAN Olfactory receptor 4L1 - Homo sapiens (Human)|
          Length = 312

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
 Frame = +1

Query: 262 ILSWHDGTIHPICQLAYSRNLHF-----------SRPVIVAFSCIRSFAI-MTNLWNRMN 405
           ILSW  G +H I Q+  + NL F             P+++  +CI ++ + +  + +   
Sbjct: 146 ILSWIIGFLHSISQIVLTMNLPFCGHNVINNIFCDLPLVIKLACIETYTLELFVIADSGL 205

Query: 406 TVLELYLLLIFGHRVFLAKKKKK 474
                ++LL+  + V L    KK
Sbjct: 206 LSFTCFILLLVSYIVILVSVPKK 228


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 56,523,019
Number of extensions: 922602
Number of successful extensions: 2774
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2772
Number of HSP's successfully gapped: 7
Length of query: 158
Length of database: 100,686,439
Length adjustment: 104
Effective length of query: 54
Effective length of database: 72,159,759
Effective search space: 3896626986
Effective search space used: 3896626986
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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